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At least 235 records · Page 13

Quantifying energy and mass transfer in crop canopies: sensors for measurement of temperature and air velocity

Here we report on the in situ performance of inexpensive, miniature sensors that have increased our ability to measure mass and energy fluxes from plant canopies in controlled environments: 1. Surface temperature. Canopy temperature measurements indicate changes in stomatal aperture and thus latent and sensible heat fluxes. Infrared transducers from two manufacturers (Exergen Corporation, Newton, MA; and Everest Interscience, Tucson, AZ, USA) have recently become available. Transducer accuracy matched that of a more expensive hand-held infrared thermometer. 2. Air velocity varies above and within plant canopies and is an important component in mass and energy transfer models. We tested commercially-available needle, heat-transfer anemometers (1 x 50 mm cylinder) that consist of a fine-wire thermocouple and a heater inside a hypodermic needle. The needle is heated and wind speed determined from the temperature rise above ambient. These sensors are particularly useful in measuring the low wind speeds found within plant canopies. 3. Accurate measurements of air temperature adjacent to plant leaves facilitates transport phenomena modeling. We quantified the effect of radiation and air velocity on temperature rise in thermocouples from 10 to 500 micrometers. At high radiation loads and low wind speeds, temperature errors were as large as 7 degrees C above air temperature.

NASA Program CELSS↗

Physical Interpretation of the Correlation Between Multi-Angle Spectral Data and Canopy Height

Recent empirical studies have shown that multi-angle spectral data can be useful for predicting canopy height, but the physical reason for this correlation was not understood. We follow the concept of canopy spectral invariants, specifically escape probability, to gain insight into the observed correlation. Airborne Multi-Angle Imaging Spectrometer (AirMISR) and airborne Laser Vegetation Imaging Sensor (LVIS) data acquired during a NASA Terrestrial Ecology Program aircraft campaign underlie our analysis. Two multivariate linear regression models were developed to estimate LVIS height measures from 28 AirMISR multi-angle spectral reflectances and from the spectrally invariant escape probability at 7 AirMISR view angles. Both models achieved nearly the same accuracy, suggesting that canopy spectral invariant theory can explain the observed correlation. We hypothesize that the escape probability is sensitive to the aspect ratio (crown diameter to crown height). The multi-angle spectral data alone therefore may not provide enough information to retrieve canopy height globally

Schull, M. A.↗

Performance Considerations for the SIMPL Single Photon, Polarimetric, Two-Color Laser Altimeter as Applied to Measurements of Forest Canopy Structure and Composition

The Slope Imaging Multi-polarization Photon-counting Lidar (SIMPL) is a multi-beam, micropulse airborne laser altimeter that acquires active and passive polarimetric optical remote sensing measurements at visible and near-infrared wavelengths. SIMPL was developed to demonstrate advanced measurement approaches of potential benefit for improved, more efficient spaceflight laser altimeter missions. SIMPL data have been acquired for wide diversity of forest types in the summers of 2010 and 2011 in order to assess the potential of its novel capabilities for characterization of vegetation structure and composition. On each of its four beams SIMPL provides highly-resolved measurements of forest canopy structure by detecting single-photons with 15 cm ranging precision using a narrow-beam system operating at a laser repetition rate of 11 kHz. Associated with that ranging data SIMPL provides eight amplitude parameters per beam unlike the single amplitude provided by typical laser altimeters. Those eight parameters are received energy that is parallel and perpendicular to that of the plane-polarized transmit pulse at 532 nm (green) and 1064 nm (near IR), for both the active laser backscatter retro-reflectance and the passive solar bi-directional reflectance. This poster presentation will cover the instrument architecture and highlight the performance of the SIMPL instrument with examples taken from measurements for several sites with distinct canopy structures and compositions. Specific performance areas such as probability of detection, after pulsing, and dead time, will be highlighted and addressed, along with examples of their impact on the measurements and how they limit the ability to accurately model and recover the canopy properties. To assess the sensitivity of SIMPL's measurements to canopy properties an instrument model has been implemented in the FLIGHT radiative transfer code, based on Monte Carlo simulation of photon transport. SIMPL data collected in 2010 over the Smithsonian Environmental Research Center, MD are currently being modelled and compared to other remote sensing and in situ data sets. Results on the adaptation of FLIGHT to model micropulse, single'photon ranging measurements are presented elsewhere at this conference. NASA's ICESat-2 spaceflight mission, scheduled for launch in 2016, will utilize a multi-beam, micropulse, single-photon ranging measurement approach (although non-polarimetric and only at 532 nm). Insights gained from the analysis and modelling of SIMPL data will help guide preparations for that mission, including development of calibration/validation plans and algorithms for the estimation of forest biophysical parameters.

Dabney, Philip W.↗

Coherence Effects in L-Band Active and Passive Remote Sensing of Quasi-Periodic Corn Canopies

Due to their highly random nature, vegetation canopies can be modeled using the incoherent transport theory for active and passive remote sensing applications. Agricultural vegetation canopies however are generally more structured than natural vegetation. The inherent row structure in agricultural canopies induces coherence effects disregarded by the transport theory. The objective of this study is to demonstrate, via Monte-Carlo simulations, these coherence effects on L-band scattering and thermal emission from corn canopies consisting of only stalks.

Utku, Cuneyt↗

Boreal Canopy Surfaces from Spaceborne Stereogrammetry

Surface elevation estimates from high resolution spaceborne image (HRSI) stereogrammetry are used to examine fine-scaled structure of boreal forest canopies. These data can depict detailed spatial patterns of vertical forest structure at remote sites across the circumpolar domain where these estimates would otherwise be unavailable. This work examines where these estimates are most effective at describing vertical forest structure to explain which canopy surfaces they represent. We evaluated the variation in canopy surface estimates captured from four general types of HRSI digital surface models (DSMs) across the full range of boreal canopy cover.

Paul M Montesano↗

Simulation of Solar-Induced Chlorophyll Fluorescence from 3D Canopies with the Dart Model

The potential of solar-induced chlorophyll fluorescence (SIF) to monitor photosynthesis and plant stress has attracted considerable interest in SIF remote sensing (RS). However, canopy SIF and RS observations are impacted by topography, vegetation three dimension (3D) structure, leaf orientation, non foliar elements (e.g., tree woody skeleton), ... Physically based downscaling of canopy SIF RS data to leaf-level (i.e., to leaf photosynthesis) requires 3D radiative transfer (RT) models simulating canopy SIF and its observation. These models are necessary to better exploit the potential of SIF, by linking leaf SIF and SIF in RS observations as a function of canopy 3D architecture and experimental configurations (sun and viewing directions, etc.). The Discrete Anisotropic Radiative Transfer (DART) model is a comprehensive 3D radiative transfer (RT) model for urban and natural landscapes. This paper presents its SIF modeling for vegetation simulated with facets, its validation with the SCOPE/mSCOPE 1D models, and its recent extension to SIF modelling for landscapes simulated with 3D turbid medium.

radiative transfer↗

Simulation of Solar-Induced Chlorophyll Fluorescence from 3D Canopies with the Dart Model

The potential of solar-induced chlorophyll fluorescence (SIF) to monitor photosynthesis and plant stress has attracted considerable interest in SIF remote sensing (RS). However, canopy SIF and RS observations are impacted by topography, vegetation three dimension (3D) structure, leaf orientation, non foliar elements (e.g., tree woody skeleton), ... Physically based downscaling of canopy SIF RS data to leaf-level (i.e., to leaf photosynthesis) requires 3D radiative transfer (RT) models simulating canopy SIF and its observation. These models are necessary to better exploit the potential of SIF, by linking leaf SIF and SIF in RS observations as a function of canopy 3D architecture and experimental configurations (sun and viewing directions, etc.). The Discrete Anisotropic Radiative Transfer (DART) model is a comprehensive 3D radiative transfer (RT) model for urban and natural landscapes. This paper presents its SIF modeling for vegetation simulated with facets, its validation with the SCOPE/mSCOPE 1D models, and its recent extension to SIF modelling for landscapes simulated with 3D turbid medium.

Radiative transfer↗

Assessing impacts of canopy 3D structure on chlorophyll fluorescence radiance and radiative budget of deciduous forest stands using DART

Although remote sensing (RS) of solar-induced chlorophyll fluorescence (SIF) is increasingly used as a valuable source of information about vegetation photosynthetic activity, the RS SIF observations are significantly influenced by canopy-specific structural features (i.e., canopy architecture including leaf area index and presence of woody components), atmospheric conditions during their acquisition (e.g., proportion of direct and diffuse irradiance) and observational geometric configurations (e.g., sun and viewing directions). Radiative transfer (RT) models have the potential to provide a better understanding of the canopy structural effects on the SIF emission and RS signals. Here, we used the DART model to assess the daily influence, from morning to evening, of forest 3D architecture on SIF nadir radiance, emission, escape factor and nadir yield of eight 100 m × 100 m forest study plots established in a temperate deciduous forest of the Smithsonian Environmental Research Center (Edgewater, MD, USA). The 3D architecture of each plot was derived from airborne LiDAR. DART simulations of these 3D forest plots and their 1D (i.e., vertical profile of sun-adapted and shade-adapted leaves) and 0D (i.e., homogeneous layer of sun-adapted leaves above an homogeneous layer of shade-adapted leaves) abstractions were compared to assess the relative errors (ε1D−3D and ε0D−3D) associated with horizontal and vertical structural heterogeneity, respectively. Forest 3D structure, especially horizontal heterogeneity, had a great influence on forest nadir SIF radiance, resulting in ε1D−3D up to 55% at 8:00 and 18:00 (i.e., for oblique sun directions). The key indicators of this impact, in the descending order of importance, were the SIF escape factor (ε1D−3D up to 40%), the attenuation of incident photosynthetically active radiation (ε1D−3D less than 5%), and the SIF emission yield (ε1D−3D less than 2%). The influence of forest architecture on the nadir SIF escape factor and SIF yield (ε1D−3D up to 40%) varied over time, with differences in forest stand structure, and per spectral domain, being always larger between 640 and 700 nm than between 700 and 850 nm. In addition, woody elements demonstrated a large influence on forest SIF radiance due to their “shading” effect (ε up to 17%) and their “blocking” effect (ε ≈ 10%), both of them higher for far-red than for red SIF. These results underline the importance of 3D forest canopy architecture, especially 2D heterogeneity, and inclusion of woody elements in RT modeling used for interpretation of the RS SIF signal, and subsequently for the estimation of gross primary production and detection of vegetation stress.

Omar Regaieg↗

Influence of sun zenith angle on canopy clumping and the resulting impacts on photosynthesis

Addressing the impact of vegetation architecture on shortwave radiation transfer in land surface models is important for accurate weather forecasting, carbon budget estimates, and climate predictions. This paper investigates to what extent it is possible to retrieve structural parameters of two different parameterization schemes from direct transmittance derived from digital hemispherical photography and 3D radiative transfer modeling for two study sites with different vegetation canopy architectures. Neglecting the representation of 3D canopy structure in radiative transfer schemes leads to significant errors in shortwave radiation partitioning (up to 3.5 times more direct transmittance in the 3D model). Structural parameters, referred to as whole canopy ‘clumping indices’, were obtained in order to evaluate the impact of angular variation in clumping on shortwave radiation transfer. Impacts on photosynthesis were evaluated at site level with the UKESM land surface model, JULES. A comparison between flux tower derived and modeled photosynthesis indicates that considering zenith angular variations of structural parameters in the radiative transfer scheme of the UKESM land surface model significantly improves photosynthesis prediction in light limited ecosystems (from RMSE = 2.91 μmol CO 2 .m -2 .s -1 to RMSE = 1.51 μmol CO 2 .m -2 .s -1 , 48% smaller), typically with enhanced photosynthesis from bottom layers.

54 ENVIRONMENTAL SCIENCES↗

Impact of vertical and seasonal variation in leaf traits on simulating soybean canopy photosynthesis via 1D and 3D modeling

Accurate modeling of photosynthesis is crucial for predicting crop productivity and quantifying the carbon cycle in agroecosystems. Leaf traits are essential inputs for modeling canopy photosynthesis. Yet, many existing models still use fixed plant functional type (PTF)-based values to parameterize leaf traits under a big-leaf or two-big-leaf assumption, neglecting their vertical profiles and seasonal changes. This simplification may introduce significant uncertainties in estimating gross primary productivity (GPP). In this study, we simulated soybean GPP and tested the effects of vertical and seasonal variation in three key leaf photosynthetic traits: the maximum carboxylation rate at 25 °C (Vcmax 25 ), leaf chlorophyll content (LCC), and leaf mass per area (LMA) in the 1D-SCOPE and 3D-Helios models. Weekly field measurements were conducted during the growing season of 2024 to support the simulation. We designed ten leaf trait parameterization schemes by incorporating different combinations of vertical profiles and seasonal changes, while assuming homogeneous canopy architecture in both models. Our results revealed that Vcmax 25 vertical and seasonal variation had the strongest influence on simulated GPP in both 1D and 3D models, while LCC and LMA effects were minimal. Particularly, the scheme with an empirically parameterized Vcmax 25 profile achieved comparable performance to the scheme with the measured Vcmax 25 profile. Both 1D-SCOPE and 3D-Helios accurately modeled GPP (SCOPE: R 2 = 0.87, Bias = 0.55 µmol m⁻² s⁻¹; Helios: R 2 = 0.9, Bias = 0.22 µmol m⁻² s⁻¹) under the most complex scheme, and their responses to vertical and seasonal variation in leaf traits were consistent, demonstrating the robustness of our findings. Based on our findings, we propose a scalable framework for parameterizing leaf traits to improve GPP simulations. This study contributes to improving the representation of leaf trait dynamics in canopy-level photosynthesis models, potentially enhancing our ability to predict crop productivity and understand agroecosystem carbon dynamics.

54 ENVIRONMENTAL SCIENCES↗

Development of a Miniaturized Mobile Mapping System for In-Row, Under-Canopy Phenotyping

This paper focuses on the development of a miniaturized mobile mapping platform with advantages over current agricultural phenotyping systems in terms of acquiring data that facilitate under-canopy plant trait extraction. The system is based on an unmanned ground vehicle (UGV) for in-row, under-canopy data acquisition to deliver accurately georeferenced 2D and 3D products. The paper addresses three main aspects pertaining to the UGV development: (a) architecture of the UGV mobile mapping system (MMS), (b) quality assessment of acquired data in terms of georeferencing information as well as derived 3D point cloud, and (c) ability to derive phenotypic plant traits using data acquired by the UGV MMS. The experimental results from this study demonstrate the ability of the UGV MMS to acquire dense and accurate data over agricultural fields that would facilitate highly accurate plant phenotyping (better than above-canopy platforms such as unmanned aerial systems and high-clearance tractors). Plant centers and plant count with an accuracy in the 90% range have been achieved.

54 ENVIRONMENTAL SCIENCES↗

Estimating Canopy Dark Respiration for Crop Models

Crop production is obtained from accurate estimates of daily carbon gain.Canopy gross photosynthesis (Pgross) can be estimated from biochemical models of photosynthesis using sun and shaded leaf portions and the amount of intercepted photosyntheticallyactive radiation (PAR).In turn, canopy daily net carbon gain can be estimated from canopy daily gross photosynthesis when canopy dark respiration (Rd) is known.

Canopy↗

Potential Sources of Polarized Light from a Plant Canopy

Field measurements have demonstrated that sunlight polarized during a first surface reflection by shiny leaves dominates the optical polarization of the light reflected by shiny-leafed plant canopies having approximately spherical leaf angle probability density functions ("Leaf Angle Distributions" - LAD). Yet for other canopies - specifically those without shiny leaves and/or spherical LADs - potential sources of optically polarized light may not always be obvious. Here we identify possible sources of polarized light within those other canopies and speculate on the ecologically important information polarization measurements of those sources might contain.

Polarized Light↗

Tree Canopy Light Interception Estimates in Almond and a Walnut Orchards Using Ground, Low Flying Aircraft, and Satellite Based Methods to Improve Irrigation Scheduling Programs

Canopy light interception is a main driver of water use and crop yield in almond and walnut production. Fractional green canopy cover (Fc) is a good indicator of light interception and can be estimated remotely from satellite using the normalized difference vegetation index (NDVI) data. Satellite-based Fc estimates could be used to inform crop evapotranspiration models, and hence support improvements in irrigation evaluation and management capabilities. Satellite estimates of Fc in almond and walnut orchards, however, need to be verified before incorporating them into irrigation scheduling or other crop water management programs. In this study, Landsat-based NDVI and Fc from NASA's Satellite Irrigation Management Support (SIMS) were compared with four estimates of canopy cover: 1. light bar measurement, 2. in-situ and image-based dimensional tree-crown analyses, 3. high-resolution NDVI data from low flying aircraft, and 4. orchard photos obtained via Google Earth and processed by an Image J thresholding routine. Correlations between the various estimates are discussed.

Satellite↗

Estimating the Relative Water Content of Leaves in a Cotton Canopy

Remotely sensing plant canopy water status remains a long-term goal of remote sensing research. Established approaches to estimating canopy water status the Crop Water Stress Index, the Water Deficit Index and the Equivalent Water Thickness involve measurements in the thermal or reflective infrared. Here we report plant water status estimates based upon analysis of polarized visible imagery of a cotton canopy measured by ground Multi-Spectral Polarization Imager (MSPI). Such estimators potentially provide access to the plant hydrological photochemistry that manifests scattering and absorption effects in the visible spectral region.Twice during one day, +- 3 hours from solar noon, we collected polarized imagery and relative water content data on a cotton test plot located at the Arid Land Agricultural Research Center, United States Department of Agriculture, Maricopa, AZ. The test plot, a small portion of a large cotton field, contained stressed plants ready for irrigation. The evening prior to data collection we irrigated several rows of plants within the test plot. Thus, ground MSPI imagery from both morning and afternoon included cotton plants with a range of water statuses. Data analysis includes classifying the polarized imagery into sunlit reflecting, sunlit transmitting, shaded foliage and bare soil. We estimate the leaf surface reflection and interior reflection based upon the per pixel polarization and sunview directions. We compare our cotton results with our prior polarization results for corn and soybean leaves measured in the lab and corn leaves measured in the field.

Cotton Canopy↗

San José Urban Development: Quantifying Canopy Cover and Land Surface Temperature in San José to Identify Future Tree Planting Sites

The urban heat island effect refers to the phenomenon of substantially increased temperatures in urban areas compared to their surrounding suburban or rural counterparts. The City of San José’s Department of Parks, Recreation and Neighborhood Services (PRNS) and Department of Transportation (DOT) work to mitigate the UHI effect through urban forestry initiatives. The PRNS and DOT partnered with NASA DEVELOP to identify areas in need of tree plantings. We examined land surface temperature (LST) throughout the city using data from the Thermal Infrared Sensor (TIRS) and TIRS-2 on NASA’s Landsat 8 and 9 satellites from 2013 to 2024. We also assessed canopy cover in parks using LiDAR data collected in 2020 for the United States Geological Survey’s 3D Elevation Program, and measured vegetation greenness using the Normalized Difference Vegetation Index (NDVI) with PlanetScope imagery from 2018 to 2024. We evaluated social and environmental factors that influence the distribution of heat event impacts by creating a heat vulnerability index. We found that heat is concentrated in urban areas and that poor vegetation health is associated with high LST. We also found that socially vulnerable communities are disproportionately located in areas of high environmental risk. These analyses allow the partners to prioritize tree plantings in parks near areas of high social and environmental risk. We determined that Earth observations can be used to inform urban forestry decision making, but because methodologies for using LiDAR to assess canopy cover vary greatly, it is difficult to make comparisons across different canopy cover assessments.

land surface temperature↗

Effects of canopy midstory management and fuel moisture on wildfire behavior

Abstract Increasing trends in wildfire severity can partly be attributed to fire exclusion in the past century which led to higher fuel accumulation. Mechanical thinning and prescribed burns are effective techniques to manage fuel loads and to establish a higher degree of control over future fire risk, while restoring fire prone landscapes to their natural states of succession. However, given the complexity of interactions between fine scale fuel heterogeneity and wind, it is difficult to assess the success of thinning operations and prescribed burns. The present work addresses this issue systematically by simulating a simple fire line and propagating through a vegetative environment where the midstory has been cleared in different degrees, leading to a canopy with almost no midstory, another with a sparse midstory and another with a dense midstory. The simulations are conducted for these three canopies under two different conditions, where the fuel moisture is high and where it is low. These six sets of simulations show widely different fire behavior, in terms of fire intensity, spread rate and consumption. To understand the physical mechanisms that lead to these differences, detailed analyses are conducted to look at wind patterns, mean flow and turbulent fluxes of momentum and energy. The analyses also lead to improved understanding of processes leading to high intensity crowning behavior in presence of a dense midstory. Moreover, this work highlights the importance of considering fine scale fuel heterogeneity, seasonality, wind effects and the associated fire-canopy-atmosphere interactions while considering prescribed burns and forest management operations.

54 ENVIRONMENTAL SCIENCES↗

Deep-learning-based canopy height model generation from sub-meter resolution panchromatic satellite imagery

Canopy height models (CHMs) with sufficient resolution to distinguish individual trees are useful for a variety of applications. However, standard techniques to acquire such data, such as airborne lidar surveying, are often prohibitively expensive. Deep learning techniques for generating CHMs from high-resolution imagery are an attractive option to reduce costs. To date, success with these methods has been demonstrated using multichannel aerial photography and specialized satellite data products derived from multiple sensors, neither of which is commonly available at temporal resolutions finer than one year. Here we demonstrate a method to generate sub-meter resolution CHMs in three forests in California using a more abundant data source: sub-meter resolution, panchromatic satellite imagery from a single sensor. We show that phenology and species composition play important roles in model transferability; when trained using imagery from a single conifer forest in autumn, the model performs well on autumn imagery from a second conifer forest several hundred kilometers distant with no re-training. With modest additions to the training dataset, the same model generates minimally biased estimates of canopy height in both conifer and deciduous forests during multiple seasons. Because the model operates on satellite data with global coverage and a relatively short return interval, we propose its suitability to extrapolate tree-level canopy height data to remote regions and conduct high-temporal resolution monitoring of forest structure. We furthermore demonstrate the workflow’s applicability to fire modeling by conducting simulations in forests populated by trees measured using both this approach and airborne lidar surveying. We find minimal differences in fire behavior relative to a baseline case in which only statistical distributions of tree height and crown area are known. This result underscores the value of forest structural information derived from our workflow for improving the fidelity of wildland fire simulations, among other ecological applications.

54 ENVIRONMENTAL SCIENCES↗