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Results for “Cluster Analysis”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 235 records · Page 13
All sourcesNASA NTRSDOE OSTI
NASA NTRS2022

On the Effects of Cloud Water Content on Passive Microwave Snowfall Retrievals

The Bayesian passive microwave retrievals of snowfall often rely on mathematical matching of the observed vectors of brightness temperature with an a priori database of precipitation profiles and their corresponding brightness temperatures. Mathematical proximity does not necessarily lead to consistent retrievals due to limited information content of passive microwave observations. This paper defines imposter (genuine) vectors of brightness temperature as those that are mathematically close but physically inconsistent (consistent) and characterizes them through the Silhouette Coefficient (SC) analysis. The Neyman–Pearson (NP) hypothesis testing is used to separate the imposter and genuine brightness temperatures based on their associated values of cloud ice (IWP) and liquid water path (LWP), given by coincidences of CloudSat Profiling Radar (CPR) and the Global Precipitation Measurement (GPM) Microwave Imager (GMI). The study determines thresholds for IWP and LWP that allow optimal identification of imposter brightness temperatures of non-snowing and snowing clouds, which can mislead the passive microwave retrieval algorithms to falsely detect or miss the snowfall events. It is demonstrated that emission signal of supercooled liquid water in snowing clouds can lead to improved passive microwave retrieval of snowfall and conditioning the retrievals to the cloud IWP and LWP can result in marginal correction of the snowfall detection probability; however, reduce the probability of false alarm by 6%–8% over sea ice and open oceans.

Snowfall↗
NASA NTRS2003

Patterns of global gene expression in rat skeletal muscle during unloading and low-intensity ambulatory activity

Physical inactivity and unloading lead to diverse skeletal muscle alterations. Our goal was to identify the genes in skeletal muscle whose expression is most sensitive to periods of unloading/reduced physical activity and that may be involved in triggering initial responses before phenotypic changes are evident. The ability of short periods of physical activity/loading as an effective countermeasure against changes in gene expression mediated by inactivity was also tested. Affymetrix microarrays were used to compare mRNA levels in the soleus muscle under three experimental treatments (n = 20-29 rats each): 12-h hindlimb unloading (HU), 12-h HU followed by 4 h of intermittent low-intensity ambulatory and postural activity (4-h reloading), and control (with ambulatory and postural activity). Using a combination of criteria, we identified a small set of genes (approximately 1% of 8,738 genes on the array or 4% of significant expressed genes) with the most reproducible and largest responses to altered activity. Analysis revealed a coordinated regulation of transcription for a large number of key signaling proteins and transcription factors involved in protein synthesis/degradation and energy metabolism. Most (21 of 25) of the gene expression changes that were downregulated during HU returned at least to control levels during the reloading. In surprising contrast, 27 of 38 of the genes upregulated during HU remained significantly above control, but most showed trends toward reversal. This introduces a new concept that, in general, genes that are upregulated during unloading/inactivity will be more resistant to periodic reloading than those genes that are downregulated. This study reveals genes that are the most sensitive to loading/activity in rat skeletal muscle and indicates new targets that may initiate muscle alterations during inactivity.

NASA Discipline Musculoskeletal↗
NASA NTRS1990

The peculiar velocity field in the Perseus-Pisces supercluster

Results are reported from a program to study peculiar motions of galaxies in the Per-Psc supercluster. The data set consists of newly obtained CCD photometry and published 21-cm line widths for 320 spiral galaxies. The peculiar velocities of these objects are estimated using the Tully-Fisher relation, calibrated with respect to an independent sample of cluster galaxies. Analysis shows that the principal feature of the velocity field in the Per-Psc region is a coherent streaming toward the Local Group. Nearly all the galaxies well in the foreground (cz less than about 2000 km/sec) have negtive peculiar velocities of amplitude about 1000 km/sec. A great majority of objects in the background of the supercluster, out to redshifts of about 7000 km/sec, also have very large negative peculiar velocities. The supercluster ridge itself, at a redshift or about 5000 km/sec, appears to consist of positive and negative peculiar-velocity groups of galaxies, but with negative peculiar velocities predominating both in amplitude and in number of objects involved.

Willick, Jeffrey A.↗
NASA NTRS1990

IPC two-color analysis of x ray galaxy clusters

The mass distributions were determined of several clusters of galaxies by using X ray surface brightness data from the Einstein Observatory Imaging Proportional Counter (IPC). Determining cluster mass distributions is important for constraining the nature of the dark matter which dominates the mass of galaxies, galaxy clusters, and the Universe. Galaxy clusters are permeated with hot gas in hydrostatic equilibrium with the gravitational potentials of the clusters. Cluster mass distributions can be determined from x ray observations of cluster gas by using the equation of hydrostatic equilibrium and knowledge of the density and temperature structure of the gas. The x ray surface brightness at some distance from the cluster is the result of the volume x ray emissivity being integrated along the line of sight in the cluster.

White, Raymond E., III↗
NASA NTRS1996

Analysis of LAC Observations of Clusters of Galaxies and Supernova Remnants

The following publications are included and serve as the final report: The X-ray Spectrum of Abell 665; Clusters of Galaxies; Ginga Observation of an Oxygen-rich Supernova Remnant; Ginga Observations of the Coma Cluster and Studies of the Spatial Distribution of Iron; A Measurement of the Hubble Constant from the X-ray Properties and the Sunyaev-Zel'dovich Effect of Abell 2218; Non-polytropic Model for the Coma Cluster; and Abundance Gradients in Cooling Flow Clusters: Ginga LAC (Large Area Counter) and Einstein SSS (Solid State Spectrometer) Spectra of A496, A1795, A2142, and A2199.

Hughes, J.↗
NASA NTRS2002

Saccharomyces cerevisiae gene expression changes during rotating wall vessel suspension culture

This study utilizes Saccharomyces cerevisiae to study genetic responses to suspension culture. The suspension culture system used in this study is the high-aspect-ratio vessel, one type of the rotating wall vessel, that provides a high rate of gas exchange necessary for rapidly dividing cells. Cells were grown in the high-aspect-ratio vessel, and DNA microarray and metabolic analyses were used to determine the resulting changes in yeast gene expression. A significant number of genes were found to be up- or downregulated by at least twofold as a result of rotational growth. By using Gibbs promoter alignment, clusters of genes were examined for promoter elements mediating these genetic changes. Candidate binding motifs similar to the Rap1p binding site and the stress-responsive element were identified in the promoter regions of differentially regulated genes. This study shows that, as in higher order organisms, S. cerevisiae changes gene expression in response to rotational culture and also provides clues for investigations into the signaling pathways involved in gravitational response.

Non-NASA Center↗
NASA NTRS2001

Monte Carlo predictions of DNA fragment-size distributions for large sizes after HZE particle irradiation

DSBs (double-strand breaks) produced by densely ionizing space radiation are not located randomly in the genome: recent data indicate DSB clustering along chromosomes. DSB clustering at large scales, from >100 Mbp down to approximately 2 kbp, is modeled using a Monte-Carlo algorithm. A random-walk model of chromatin is combined with a track model, that predicts the radial distribution of energy from an ion, and the RLC (randomly-located-clusters) formalism, in software called DNAbreak. This model generalizes the random-breakage model, whose broken-stick fragment-size distribution is applicable to low-LET radiation. DSB induction due to track interaction with the DNA volume depends on the radiation quality parameter Q. This dose-independent parameter depends only weakly on LET. Multi-track, high-dose effects depend on the cluster intensity parameter lambda, proportional to fluence as defined by the RLC formalism. After lambda is determined by a numerical experiment, the model reduces to one adjustable parameter Q. The best numerical fits to the experimental data, determining Q, are obtained. The knowledge of lambda and Q allows us to give biophysically based extrapolations of high-dose DNA fragment-size data to low doses or to high LETs.

NASA Center JSC↗
NASA NTRS2000

A polymer, random walk model for the size-distribution of large DNA fragments after high linear energy transfer radiation

DNA double-strand breaks (DSBs) produced by densely ionizing radiation are not located randomly in the genome: recent data indicate DSB clustering along chromosomes. Stochastic DSB clustering at large scales, from > 100 Mbp down to < 0.01 Mbp, is modeled using computer simulations and analytic equations. A random-walk, coarse-grained polymer model for chromatin is combined with a simple track structure model in Monte Carlo software called DNAbreak and is applied to data on alpha-particle irradiation of V-79 cells. The chromatin model neglects molecular details but systematically incorporates an increase in average spatial separation between two DNA loci as the number of base-pairs between the loci increases. Fragment-size distributions obtained using DNAbreak match data on large fragments about as well as distributions previously obtained with a less mechanistic approach. Dose-response relations, linear at small doses of high linear energy transfer (LET) radiation, are obtained. They are found to be non-linear when the dose becomes so large that there is a significant probability of overlapping or close juxtaposition, along one chromosome, for different DSB clusters from different tracks. The non-linearity is more evident for large fragments than for small. The DNAbreak results furnish an example of the RLC (randomly located clusters) analytic formalism, which generalizes the broken-stick fragment-size distribution of the random-breakage model that is often applied to low-LET data.

DNA/radiation effects↗
NASA NTRS2005

Use of multiresolution wavelet feature pyramids for automatic registration of multisensor imagery

The problem of image registration, or the alignment of two or more images representing the same scene or object, has to be addressed in various disciplines that employ digital imaging. In the area of remote sensing, just like in medical imaging or computer vision, it is necessary to design robust, fast, and widely applicable algorithms that would allow automatic registration of images generated by various imaging platforms at the same or different times and that would provide subpixel accuracy. One of the main issues that needs to be addressed when developing a registration algorithm is what type of information should be extracted from the images being registered, to be used in the search for the geometric transformation that best aligns them. The main objective of this paper is to evaluate several wavelet pyramids that may be used both for invariant feature extraction and for representing images at multiple spatial resolutions to accelerate registration. We find that the bandpass wavelets obtained from the steerable pyramid due to Simoncelli performs best in terms of accuracy and consistency, while the low-pass wavelets obtained from the same pyramid give the best results in terms of the radius of convergence. Based on these findings, we propose a modification of a gradient-based registration algorithm that has recently been developed for medical data. We test the modified algorithm on several sets of real and synthetic satellite imagery.

Evaluation Studies↗
NASA NTRS2004

Visual data mining for quantized spatial data

In previous papers we've shown how a well known data compression algorithm called Entropy-constrained Vector Quantization ( can be modified to reduce the size and complexity of very large, satellite data sets. In this paper, we descuss how to visualize and understand the content of such reduced data sets.

cluster analysis↗
NASA NTRS2011

Flood Inundation Mapping in the Logone Floodplain from Multi Temporal Landsat ETM+Imagery

Yearly flooding in the Logone floodplain makes an impact on agricultural, pastoral, and fishery systems in the Lake Chad Basin. Since the flooding extent and depth are highly variable, flood inundation mapping helps us make better use of water resources and prevent flood hazards in the Logone floodplain. The flood maps are generated from 33 multi temporal Landsat Enhanced Thematic Mapper Plus (ETM+) during three years 2006 to 2008. Flooded area is classified using a short-wave infrared band whereas open water is classified by Iterative Self-organizing Data Analysis (ISODATA) clustering. The maximum flooding extent in the study area increases up to approximately 5.8K km2 in late October 2008. The study also provides strong correlation of the flooding extents with water height variations in both the floodplain and the river based on a second polynomial regression model. The water heights are from ENIVSAT altimetry in the floodplain and gauge measurements in the river. Coefficients of determination between flooding extents and water height variations are greater than 0.91 with 4 to 36 days in phase lag. Floodwater drains back to the river and to the northeast during the recession period in December and January. The study supports understanding of the Logone floodplain dynamics in detail of spatial pattern and size of the flooding extent and assists the flood monitoring and prediction systems in the catchment.

Jung, Hahn Chul↗
NASA NTRS2020

Assisted Authoring of Model-Based Systems Engineering Documents

In systems engineering practices system design and analysis have historically been performed using a document-centric approach where stakeholders produce a number of documents that represent their views on a system under development. Given the ad-hoc, disparate, and informal nature of natural language documents, these views become quickly inconsistent. Rigor in engineering work is also lost in the transition from model based engineering design and analysis to engineering documents. Once the documents are delivered, the engineering portion of the work is disconnected. In the Open Model Based Engineering Environment (OpenMBEE), Cross-References (aka transclusions) synthesize data for engineering when the information is not simply hyperlinked, but referenced in place in a document, upgrading a document-based process with model-based engineering technology. Those Cross-References are nowadays partially created manually, putting a burden on the engineer who is authoring the document.This paper presents an approach which can assist the engineer by providing machine-generated suggestions for Cross-References using language processing, graph analysis, and clustering technologies on model data managed by the OpenMBEE infrastructure.

Gomes, Ivan↗
NASA NTRS2019

An Evolutionary System of Mineralogy: Proposal for A Classification of Planetary Materials Based on Natural Kind Clustering

Minerals reveal the nature of the co-evolving geosphere and biosphere through billions of years of Earth history. Mineral classification systems have the potential to elucidate this rich evolutionary story; however, the present mineral taxonomy, based as it is on idealized major element chemistry and crystal structure, lacks a temporal aspect, and thus cannot reflect planetary evolution. A complementary evolutionary system of mineralogy based on the quantitative recognition of “natural kind clustering” for a wide range of condensed planetary materials with different paragenetic origins has the potential to amplify, though not supersede, the present classification system.

Philosophy of mineralogy↗
NASA NTRS2020

Reply to “A Comment on ‘an Evolutionary System of Mineralogy: Proposal for A Classification of Planetary Materials Based on Natural Kind Clustering’”

I welcome the “Comment” from Hatert et al. (2021) related to the proposal for an “Evolutionary system of mineralogy” (Hazen 2019) and thank them for their historically informed, conceptually nuanced, and consistently constructive contribution. They offer corrections related to two facets of my paper that seemed unfairly to criticize aspects of the International Mineralogical Association’s Commission on New Minerals, Nomenclature and Classification (IMA-CNMNC) protocols for classifying minerals. First, they note an unfortunate inferred ambivalence with respect to the relationship between the IMA system and the new evolutionary system. If I was once ambivalent, that view has changed. Having spent the past two years in an ongoing effort to develop this new historical approach, I am struck every day by the power of the IMA-CNMNC system of species classification and nomenclature, which is fundamental and indispensable to the science of mineralogy. As Hatert et al. suggest, any new approach to organizing natural solids, including one focused on planetary evolution, must rest on the foundation provided by the IMA-CNMNC and its many volunteers who selflessly bring order to the mineral kingdom. In the best scenario, the evolutionary system may one day emerge as one of several useful approaches that complement and amplify but in no way replace this core IMA-CNMNC foundation, as clearly stated in the abstract of Hazen (2019). Second, Hatert et al. (2021) offer corrections regarding the IMA-CNMNC approach to classification, in particular a mischaracterization of the formal process to incorporate amorphous phases, poorly crystalline materials, and loosely defined “mineraloids.” I am grateful for the clarifications, as well as the implication that IMA protocols may facilitate the embrace of additional such phases in the future. Finally, I welcome the chance to explore further the emerging concept of “natural kinds” as applied to the mineral kingdom. Here, our thoughts differ. I suggest that minerals, considered in their information-rich, idiosyncratic, paragenetic contexts (in contrast to IMA-CNMNC species), have the potential to represent quintessential examples of “natural kinds.” Furthermore, when viewed in their evolutionary context, minerals offer an intriguing opportunity to expand the concept of “historical natural kinds” beyond its present limited and, at times, controversial use in biology, into the realm of the co-evolving geosphere and biosphere.

Philosophy of mineralogy↗