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The Hyperspectral Infrared Imager (HyspIRI) Public Health and Air Quality Applications

The neglected tropical diseases (NTDs), a group of chronic, debilitating, and poverty-promoting parasitic, bacterial, and some viral and fungal infections, are among the most common causes of illness of the poorest people living in developing countries. Abiotic environmental factors are important in determining the distribution of disease-causing vectors and their life-cycles. HyspIRI observations can be merged through a Land Data Assimilation System (LDAS) be used to drive spatially-explicit ecological models of NTD vectors distribution & life cycles. Assimilations will be driven by observational data LDAS and satellite-derived meteorological forcing data, parameter datasets, and assimilation observations. HyspIRI hyperspectral measurements would provide global measurements of surface mineralogy and biotic crusts important in accessing the impact of dust in human health. HyspIRI surface thermal measurements would also help identify the variability of dust sources due to surface moisture conditions and map mineralogy.

Luvall, Jeffrey C.↗

The Hyperspectral Infrared Imager (HyspIRI) Public Health and Air Quality Applications

The neglected tropical diseases (NTDs), a group of chronic, debilitating, and poverty-promoting parasitic, bacterial, and some viral and fungal infections, are among the most common causes of illness of the poorest people living in developing countries. Abiotic environmental factors are important in determining the distribution of disease-causing vectors and their life-cycles. HyspIRI observations can be merged through a Land Data Assimilation System (LDAS) be used to drive spatially-explicit ecological models of NTD vectors distribution & life cycles. Assimilations will be driven by observational data LDAS and satellite-derived meteorological forcing data, parameter datasets, and assimilation observations. HyspIRI hyperspectral measurements would provide global measurements of surface mineralogy and biotic crusts important in accessing the impact of dust in human health. HyspIRI surface thermal measurements would also help identify the variability of dust sources due to surface moisture conditions and map mineralogy.

Luvall, Jeffrey C.↗

Organizing Compression of Hyperspectral Imagery to Allow Efficient Parallel Decompression

family of schemes has been devised for organizing the output of an algorithm for predictive data compression of hyperspectral imagery so as to allow efficient parallelization in both the compressor and decompressor. In these schemes, the compressor performs a number of iterations, during each of which a portion of the data is compressed via parallel threads operating on independent portions of the data. The general idea is that for each iteration it is predetermined how much compressed data will be produced from each thread.

Klimesh, Matthew A.↗

How Cities Breathe: Ground-Referenced, Airborne Hyperspectral Imaging Precursor Measurements To Space-Based Monitoring

Methane's (CH4) large global warming potential (Shindell et al., 2012) and likely increasing future emissions due to global warming feedbacks emphasize its importance to anthropogenic greenhouse warming (IPCC, 2007). Furthermore, CH4 regulation has far greater near-term climate change mitigation potential versus carbon dioxide CO2, the other major anthropogenic Greenhouse Gas (GHG) (Shindell et al., 2009). Uncertainties in CH4 budgets arise from the poor state of knowledge of CH4 sources - in part from a lack of sufficiently accurate assessments of the temporal and spatial emissions and controlling factors of highly variable anthropogenic and natural CH4 surface fluxes (IPCC, 2007) and the lack of global-scale (satellite) data at sufficiently high spatial resolution to resolve sources. Many important methane (and other trace gases) sources arise from urban and mega-urban landscapes where anthropogenic activities are centered - most of humanity lives in urban areas. Studying these complex landscape tapestries is challenged by a wide and varied range of activities at small spatial scale, and difficulty in obtaining up-to-date landuse data in the developed world - a key desire of policy makers towards development of effective regulations. In the developing world, challenges are multiplied with additional political access challenges. As high spatial resolution satellite and airborne data has become available, activity mapping applications have blossomed - i.e., Google maps; however, tap a minute fraction of remote sensing capabilities due to limited (three band) spectral information. Next generation approaches that incorporate high spatial resolution hyperspectral and ultraspectral data will allow detangling of the highly heterogeneous usage megacity patterns by providing diagnostic identification of chemical composition from solids (refs) to gases (refs). To properly enable these next generation technologies for megacity include atmospheric radiative transfer modeling the complex and often aerosol laden, humid, urban microclimates, atmospheric transport and profile monitoring, spatial resolution, temporal cycles (diurnal and seasonal which involve interactions with the surrounding environment diurnal and seasonal cycles) and representative measurement approaches given traffic realities. Promising approaches incorporate contemporaneous airborne remote sensing and in situ measurements, nocturnal surface surveys, with ground station measurement

Leifer, Ira↗

The Hyperspectral Infrared Imager (HyspIRI) Public Health & Air Quality Applications

The neglected tropical diseases (NTDs), a group of chronic, debilitating, and poverty-promoting parasitic, bacterial, and some viral and fungal infections, are among the most common causes of illness of the poorest people living in developing countries. Abiotic environmental factors are important in determining the distribution of disease-causing vectors and their life-cycles. HyspIRI observations can be merged through a Land Data Assimilation System (LDAS) be used to drive spatially-explicit ecological models of NTD vectors distribution & life cycles. Assimilations will be driven by observational data LDAS and satellite-derived meteorological forcing data, parameter datasets, and assimilation observations. HyspIRI hyperspectral measurements would provide global measurements of surface mineralogy and biotic crusts important in accessing the impact of dust in human health. HyspIRI surface thermal measurements would also help identify the variability of dust sources due to surface moisture conditions and map mineralogy.

Luvall, Jeffrey C.↗

A Comparison of the Red Green Blue Air Mass Imagery and Hyperspectral Infrared Retrieved Profiles

The Red Green Blue (RGB) Air Mass imagery is derived from multiple channels or paired channel differences. Multiple channel products typically provide additional information than a single channel can provide alone. The RGB Air Mass imagery simplifies the interpretation of temperature and moisture characteristics of air masses surrounding synoptic and mesoscale features. Despite the ease of interpretation of multiple channel products, the combination of channels and channel differences means the resulting product does not represent a quantity or physical parameter such as brightness temperature in conventional single channel satellite imagery. Without a specific quantity to reference, forecasters are often confused as to what RGB products represent. Hyperspectral infrared retrieved profiles of temperature, moisture, and ozone can provide insight about the air mass represented on the RGB Air Mass product and provide confidence in the product and representation of air masses despite the lack of a quantity to reference for interpretation. This study focuses on RGB Air Mass analysis of Hurricane Sandy as it moved north along the U.S. East Coast, while transitioning to a hybrid extratropical storm. Soundings and total column ozone retrievals were analyzed using data from the Cross-track Infrared and Advanced Technology Microwave Sounder Suite (CrIMSS) on the Suomi National Polar Orbiting Partnership satellite and the Atmospheric Infrared Sounder (AIRS) on the National Aeronautics and Space Administration Aqua satellite along with dropsondes that were collected from National Oceanic and Atmospheric Administration and Air Force research aircraft. By comparing these datasets to the RGB Air Mass, it is possible to capture quantitative information that could help in analyzing the synoptic environment enough to diagnose the onset of extratropical transition. This was done by identifying any stratospheric air intrusions (SAIs) that existed in the vicinity of Sandy as the wind field expanded and the cloud pattern evolved into an atypical pattern.

Berndt, E. B.↗

A Comparison of the Red Green Blue (RGB) Air Mass Imagery and Hyperspectral Infrared Retrieved Profiles and NOAA G-IV Dropsondes

RGB air mass imagery is derived from multiple channels or paired channel differences. The combination of channels and channel differences means the resulting imagery does not represent a quantity or physical parameter such as brightness temperature in conventional single channel imagery. Without a specific quantity to reference, forecasters are often confused as to what RGB products represent. Hyperspectral infrared retrieved profiles and NOAA G-IV dropsondes provide insight about the vertical structure of the air mass represented on the RGB air mass imagery and are a first step to validating the imagery.

Berndt, Emily↗

The Impact of the Assimilation of Hyperspectral Infrared Retrieved Profiles on Advanced Weather and Research Model Simulations of a Non-Convective Wind Event

Tropopause folds are identified by warm, dry, high-potential vorticity, ozone-rich air and are one explanation for damaging non-convective wind events. Could improved model representation of stratospheric air and associated tropopause folding improve non-convective wind forecasts and high wind warnings? The goal of this study is to assess the impact of assimilating Hyperspectral Infrared (IR) profiles on forecasting stratospheric air, tropopause folds, and associated non-convective winds: (1) AIRS: Atmospheric Infrared Sounder (2) IASI: Infrared Atmospheric Sounding Interferometer (3) CrIMSS: Cross-track Infrared and Microwave Sounding Suite

Brendt. Emily↗

The Hyperspectral Infrared Imager (HyspIRI) Public Health and Air Quality Applications

The neglected tropical diseases (NTDs), a group of chronic, debilitating, and poverty-promoting parasitic, bacterial, and some viral and fungal infections, are among the most common causes of illness of the poorest people living in developing countries. Abiotic environmental factors are important in determining the distribution of disease-causing vectors and their life-cycles. HyspIRI observations can be merged through a Land Data Assimilation System (LDAS) be used to drive spatially-explicit ecological models of NTD vectors distribution and life cycles. Assimilations will be driven by observational data LDAS and satellite-derived meteorological forcing data, parameter datasets, and assimilation observations. HyspIRI hyperspectral measurements would provide global measurements of surface mineralogy and biotic crusts important in accessing the impact of dust in human health. HyspIRI surface thermal measurements would also help identify the variability of dust sources due to surface moisture conditions and map mineralogy.

Luvall, Jeffrey C.↗

Hyperspectral Imager for the Coastal Ocean (HICO): Overview, Operational Updates, and Coastal Ocean Applications

The Hyperspectral Imager for the Coastal Ocean (HICO) was built to measure in‐water properties of complex coastal regions. HICO enables synoptic coverage; 100‐meter spatial resolution for sampling the variability and spatial irregularity of coastal waters; and high spectral resolution to untangle the signals from chlorophyll, colored dissolved organic matter, suspended sediments and varying bottom types. HICO was built by the Naval Research Laboratory, installed on the International Space Station (ISS) in September 2009, and operated for ONR for the first three years. In 2013, NASA assumed sponsorship of operations in order to leverage HICO's ability to address their Earth monitoring mission. This has opened up access of HICO data to the broad research community. Over 8000 images are now available on NASA's Ocean Color Website (http://oceancolor.gsfc.nasa.gov/cgi/browse.pl?sen=hi). Oregon State University's HICO website (http://hico.coas.oregonstate.edu) remains the portal for researchers to request new collections and access their requested data. We will present updates on HICO's calibration and improvements in geolocation and show examples of the use of HICO data to address issues in the coastal ocean and Great Lakes.

Davis, Curtiss O.↗

Development and Application of Hyperspectral Infrared Ozone Retrieval Products for Operational Meteorology

Cyclogenesis is a key forecast challenge at operational forecasting centers such as WPC and OPC, so these centers have a particular interest in unique products that can identify key storm features. In some cases, explosively developing extratropical cyclones can produce hurricane force, non-convective winds along the East Coast and north Atlantic as well as the Pacific Ocean, with the potential to cause significant damage to life and property. Therefore, anticipating cyclogenesis for these types of storms is crucial for furthering the NOAA goal of a "Weather Ready Nation". Over the last few years, multispectral imagery (i.e. RGB) products have gained popularity among forecasters. The GOES-R satellite champion at WPC/OPC has regularly evaluated the Air Mass RGB products from GOES Sounder, MODIS, and SEVIRI to aid in forecasting cyclogenesis as part of ongoing collaborations with SPoRT within the framework of the GOES-R Proving Ground. WPC/OPC has used these products to identify regions of stratospheric air associated with tropopause folds that can lead to cyclogenesis and hurricane force winds. RGB products combine multiple channels or channel differences into multi-color imagery in which different colors represent a particular cloud or air mass type. Initial interaction and feedback from forecasters evaluating the legacy Air Mass RGBs revealed some uncertainty regarding what physical processes the qualitative RGB products represent and color interpretation. To enhance forecaster confidence and interpretation of the Air Mass RGB, NASA SPoRT has transitioned a total column ozone product from AIRS retrievals to the WPC/OPC. The use of legacy AIRS demonstrates future JPSS capabilities possible with CrIS or OMPS. Since stratospheric air can be identified by anomalous potential vorticity and warm, dry, ozone-rich air, hyperspectral infrared sounder ozone products can be used in conjunction with the Air Mass RGB for identifying the role of stratospheric air in explosive cyclogenesis and hurricane force wind events. Currently, forecasters at WPC/OPC are evaluating the Air Mass RGB imagery in conjunction with the AIRS total column ozone to aid forecasting cyclogenesis and high wind forecasts. One of the limitations of the total ozone product is that it is difficult for forecasters to determine whether elevated ozone concentrations are related to stratospheric air or climatologically high values of ozone in certain regions. To address this limitation, SPoRT created an AIRS ozone anomaly product which calculates the percent of normal ozone based on a global stratospheric ozone mean climatology. With the knowledge that ozone values 125 percent of normal and greater typically represent stratospheric air; the anomaly product can be used with the total column ozone product to confirm regions of stratospheric air on the Air Mass RGB. This presentation describes the generation of these products along with forecaster feedback concerning the use of the AIRS ozone products in conjunction with the Air Mass RGB product for the unique forecast challenges WPC/OPC face. Additionally examples of CrIS ozone and anomaly products will be shown to further demonstrate the utility and capability of JPSS in forecasting unique events.

Berndt, Emily↗

Metric Learning for Hyperspectral Image Segmentation

We present a metric learning approach to improve the performance of unsupervised hyperspectral image segmentation. Unsupervised spatial segmentation can assist both user visualization and automatic recognition of surface features. Analysts can use spatially-continuous segments to decrease noise levels and/or localize feature boundaries. However, existing segmentation methods use tasks-agnostic measures of similarity. Here we learn task-specific similarity measures from training data, improving segment fidelity to classes of interest. Multiclass Linear Discriminate Analysis produces a linear transform that optimally separates a labeled set of training classes. The defines a distance metric that generalized to a new scenes, enabling graph-based segmentation that emphasizes key spectral features. We describe tests based on data from the Compact Reconnaissance Imaging Spectrometer (CRISM) in which learned metrics improve segment homogeneity with respect to mineralogical classes.

Compact Reconnaissance Imaging Spectrometer (CRISM↗

Hyperspectral Cubesat Constellation for Rapid Natural Hazard Response

Earth Observing 1 (E0-1) satellite has an imaging spectrometer (hyperspectral) instrument called Hyperion. The satellite is able to image any spot on Earth in the nadir looking direction every 16 days. With slewing of the satellite and allowing for up to a 23 degree view angle, any spot on the Earth can be imaged approximately every 2 to 3 days. EO-1 has been used to track many natural hazards such as wildfires, volcanoes and floods. An enhanced capability that is sought is the ability to image natural hazards in a daily time series for space based imaging spectrometers. The Hyperion can not provide this capability on EO-1 with the present polar orbit. However, a constellation of cubesats, each with the same imaging spectrometer, positioned strategically in the same orbit, can be used to provide daily coverage, cost-effectively.

Onboard processing↗

NASA 2014 The Hyperspectral Infrared Imager (HyspIRI) - Science Impact of Deploying Instruments on Separate Platforms

The Hyperspectral Infrared Imager (HyspIRI) mission was recommended for implementation by the 2007 report from the U.S. National Research Council Earth Science and Applications from Space: National Imperatives for the Next Decade and Beyond, also known as the Earth Science Decadal Survey. The HyspIRI mission is science driven and will address a set of science questions identified by the Decadal Survey and broader science community. The mission includes a visible shortwave infrared (VSWIR) imaging spectrometer, a multispectral thermal infrared (TIR) imager and an intelligent payload module (IPM). The IPM enables on-board processing and direct broadcast for those applications with short latency requirements. The science questions are organized as VSWIR-only, TIR-only and Combined science questions, the latter requiring data from both instruments. In order to prepare for the mission NASA is undertaking pre-phase A studies to determine the optimum mission implementation, in particular, cost and risk reduction activities. Each year the HyspIRI project is provided with feedback from NASA Headquarters on the pre-phase A activities in the form of a guidance letter which outlines the work that should be undertaken the subsequent year. The 2013 guidance letter included a recommendation to undertake a study to determine the science impact of deploying the instruments from separate spacecraft in sun synchronous orbits with various time separations and deploying both instruments on the International Space Station (ISS). This report summarizes the results from that study. The approach taken was to evaluate the impact on the combined science questions of time separations between the VSWIR and TIR data of <3 minutes, <1 week and a few months as well as deploying both instruments on the ISS. Note the impact was only evaluated for the combined science questions which require data from both instruments (VSWIR and TIR). The study concluded the impact of a separation of <3 minutes was minimal, e.g. if the instruments were on separate platforms that followed each other in a train. The impact of a separation of <1 week was strongly dependent on the question that was being addressed with no impact for some questions and a severe impact for others. The impact of a time separation of several months was severe and in many cases it was no longer possible to answer the sub-question. The impact of deploying the instruments on the ISS which is in a precessive (non-sun synchronous) orbit was also very question dependent, in some cases it was possible to go beyond the original question, e.g. to examine the impact of the diurnal cycle, whereas in other cases the question could not be addressed for example if the question required observations from the polar regions. As part of the study, the participants were asked to estimate, as a percentage, how completely a given sub-question could be answered with 100% indicating the question could be completely answered. These estimations should be treated with caution but nonetheless can be useful in assessing the impact. Averaging the estimates for each of the combined questions the results indicate that 97% of the questions could be answered with a separation of < 3 minutes. With a separation of < 1 week, 67% of the questions could be answered and with a separation of several months only 21% of the questions could be answered.

Turpie, Kevin↗

Hyperspectral Cubesat Constellation for Natural Hazard Response

The authors on this paper are team members of the Earth Observing 1 (E0-1) mission which has flown an imaging spectrometer (hyperspectral) instrument called Hyperion for the past 15+ years. The satellite is able to image any spot on Earth in the nadir looking direction every 16 days and with slewing, of the satellite for up to a 23 degree view angle, any spot on the Earth can be imaged approximately every 2 to 3 days. EO-1 has been used to track many natural hazards such as wildfires, volcanoes and floods. An enhanced capability that has been sought is the ability to image natural hazards in a daily time series for space-based imaging spectrometers. The Hyperion cannot provide this capability on EO-1 with the present polar orbit. However, a constellation of cubesats, each with the same imaging spectrometer, positioned strategically can be used to provide daily coverage or even diurnal coverage, cost-effectively. This paper sought to design a cubesat constellation mission that would accomplish this goal and then to articulate the key tradeoffs.

Onboarding process↗

New Methods for Retrieval of Chlorophyll Red Fluorescence from Hyperspectral Satellite Instruments: Simulations and Application to GOME-2 and SCIAMACHY

Global satellite measurements of solar-induced fluorescence (SIF) from chlorophyll over land and ocean have proven useful for a number of different applications related to physiology, phenology, and productivity of plants and phytoplankton. Terrestrial chlorophyll fluorescence is emitted throughout the red and far-red spectrum, producing two broad peaks near 683 and 736nm. From ocean surfaces, phytoplankton fluorescence emissions are entirely from the red region (683nm peak). Studies using satellite-derived SIF over land have focused almost exclusively on measurements in the far red (wavelengths greater than 712nm), since those are the most easily obtained with existing instrumentation. Here, we examine new ways to use existing hyperspectral satellite data sets to retrieve red SIF (wavelengths less than 712nm) over both land and ocean. Red SIF is thought to provide complementary information to that from the far red for terrestrial vegetation. The satellite instruments that we use were designed to make atmospheric trace-gas measurements and are therefore not optimal for observing SIF; they have coarse spatial resolution and only moderate spectral resolution (0.5nm). Nevertheless, these instruments, the Global Ozone Monitoring Instrument 2 (GOME-2) and the SCanning Imaging Absorption spectroMeter for Atmospheric CHartographY (SCIAMACHY), offer a unique opportunity to compare red and far-red terrestrial SIF at regional spatial scales. Terrestrial SIF has been estimated with ground-, aircraft-, or satellite-based instruments by measuring the filling-in of atmospheric andor solar absorption spectral features by SIF. Our approach makes use of the oxygen (O2) gamma band that is not affected by SIF. The SIF-free O2 gamma band helps to estimate absorption within the spectrally variable O2 B band, which is filled in by red SIF. SIF also fills in the spectrally stable solar Fraunhofer lines (SFLs) at wavelengths both inside and just outside the O2 B band, which further helps to estimate red SIF emission. Our approach is then an extension of previous approaches applied to satellite data that utilized only the filling-in of SFLs by red SIF. We conducted retrievals of red SIF using an extensive database of simulated radiances covering a wide range of conditions. Our new algorithm produces good agreement between the simulated truth and retrievals and shows the potential of the O2 bands for noise reduction in red SIF retrievals as compared with approaches that rely solely on SFL filling. Biases seen with existing satellite data, most likely due to instrumental artifacts that vary in time, space, and with instrument, must be addressed in order to obtain reasonable results. Our 8-year record of red SIF observations over land with the GOME-2 allows for the first time reliable global mapping of monthly anomalies. These anomalies are shown to have similar spatiotemporal structure as those in the far red, particularly for drought-prone regions. There is a somewhat larger percentage response in the red as compared with the far red for these areas that are drought sensitive. We also demonstrate that good-quality ocean fluorescence line height retrievals can be achieved with GOME-2, SCIAMACHY, and similar instruments by utilizing the full complement of radiance measurements that span the red SIF emission feature.

spatiotemporal structure↗

Inter-Comparison of S-NPP VIIRS and Aqua MODIS Thermal Emissive Bands Using Hyperspectral Infrared Sounder Measurements as a Transfer Reference

This paper compares the calibration consistency of the spectrally-matched thermal emissive bands (TEB) between the Suomi National Polar-orbiting Partnership (S-NPP) Visible Infrared Imaging Radiometer Suite (VIIRS) and the Aqua Moderate Resolution Imaging Spectroradiometer (MODIS), using observations from their simultaneous nadir overpasses (SNO). Nearly-simultaneous hyperspectral measurements from the Aqua Atmospheric Infrared Sounder(AIRS) and the S-NPP Cross-track Infrared Sounder (CrIS) are used to account for existing spectral response differences between MODIS and VIIRS TEB. The comparison uses VIIRS Sensor Data Records (SDR) in MODIS five-minute granule format provided by the NASA Land Product and Evaluation and Test Element (PEATE) and Aqua MODIS Collection 6 Level 1 B (L1B) products. Each AIRS footprint of 13.5 km (or CrIS field of view of 14 km) is co-located with multiple MODIS (or VIIRS) pixels. The corresponding AIRS- and CrIS-simulated MODIS and VIIRS radiances are derived by convolutions based on sensor-dependent relative spectral response (RSR) functions. The VIIRS and MODIS TEB calibration consistency is evaluated and the two sensors agreed within 0.2 K in brightness temperature.Additional factors affecting the comparison such as geolocation and atmospheric water vapor content are also discussed in this paper.

Li, Yonghong↗

Hyperspectral Cubesat Constellation for Natural Hazard Response (Follow-On)

Earth Observing 1 (E0-1) satellite has an imaging spectrometer (hyperspectral) instrument called Hyperion. The satellite is able to image any spot on Earth in the nadir looking direction every 16 days. With slewing of the satellite and allowing for up to a 23 degree view angle, any spot on the Earth can be imaged approximately every 2 to 3 days. EO-1 has been used to track many natural hazards such as wildfires, volcanoes and floods. An enhanced capability that is sought is the ability to image natural hazards in a daily time series for space based imaging spectrometers. The Hyperion can not provide this capability on EO-1 with the present polar orbit. However, a constellation of cubesats each powered with Intelligent Payload Modules, and each with copies of a commercial imaging spectrometer, positioned strategically in the same orbit, can be used to provide daily coverage, cost-effectively.

Onboard Processing↗