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At least 235 records · Page 13

Three Photon Excited Image Scanning Microscopy for in-Depth Super-Resolution Studies of Biological Samples

Multiphoton laser scanning microscopy is a powerful tool for deep imaging of thick biological samples. Image scanning microscopy (ISM) has demonstrated significant improvements in the signal-to-noise ratio in confocal laser scanning microscopy, while at the same time improving upon the effectively attainable resolution. Two-photon excitation (2PE), combined with ISM, has been shown to allow for deep tissue imaging with enhanced resolution compared to 2PE microscopy. Three-photon excitation (3PE) has enabled record imaging depth and contrast for multiphoton imaging, due to the superior suppression of out-of-focus signal generation. In this paper, we demonstrate super-resolution 3PE ISM. This is achieved using a single-photon avalanche detector array, and 1040-nm pulses for 3PE of blue fluorescence. This method enables subdiffraction limited resolution imaging of biological samples stained with blue fluorescent markers, such as mouse myocardial and spinal cord tissues stained with 4 ′ , 6 -diamidino-2-phenylindole. Deconvolution improves the resolving power further and allows for imaging with better than λ / 8 resolution with respect to the 3PE wavelength λ . With the ISM pixel reassignment procedure, we demonstrate a resolution enhancement of ∼ 1.6 laterally, compared to the resolution attained using a photomultiplier tube in a non-descanned detection arrangement, and a factor of ∼ 1.8 enhancement in axial resolution. The experimentally measured three-dimensional point spread function volume is shrunk ∼ 4.4 -fold, which is close to the theoretically expected enhancement. Published by the American Physical Society 2024

47 OTHER INSTRUMENTATION↗

Pulse shape measurements for neutron/gamma discrimination using the TOFPET2 ASIC

Many highly pixelated organic scintillator detection systems would benefit from independent readout of each scintillator pixel. Recent advances in Silicon Photomultiplier (SiPM) technology makes this goal feasible, however the data acquisition from potentially hundreds or thousands of channels requires a low-cost and compact solution. For pixelated neutron detection with organic scintillators, the capability to distinguish between neutron and gamma interactions using Pulse Shape Discrimination (PSD) is required along with pulse charge and time of arrival. The TOFPET2 ASIC from PETsys Electronics is a 64-channel readout chip providing pulse time and charge integration measurements from SiPMs, and is specifically designed for time-of-flight positron-emission tomography. Using an 8 × 8 array of 6 mm × 6 mm J-series SiPMs from SensL/OnSemi (ArrayJ-60035-64P-PCB), we have studied the energy and PSD performance of the TOFPET2 ASIC using a 4 × 4 array of 6 mm × 6 mm × 30 mm trans -Stilbene crystals from Inrad Optics and a custom SiPM routing board from PETsys Electronics. In conclusion, using a time-over-threshold method, we measure a maximum PSD figure-of-merit of approximately 1.2 at 478 keV (the Compton edge of 662 keV) for a J-series SiPM operating at an over-voltage of 3V.

47 OTHER INSTRUMENTATION↗

Hadron Monitor Calibration System for NuMI

NuMI (Neutrinos at Main Injector) beamline at Fermi National Accelerator Laboratory provides neutrinos to various neutrino experiments. The hadron monitor consisting of a 5 by 5 array of ionization chambers is part of the diagnostics for the beamline. In order to calibrate the hadron monitor, a gamma source is needed. We present the status and progress of the development of the calibration system for the hadron monitor. The system based on Raspberry Pi controlled CNC system, motors, and position sensors would allow us to place the gamma source precisely to calibrate the signal gain of individual pixels. The ultimate outcome of the study is a prototype of the calibration system.

43 PARTICLE ACCELERATORS↗

Shortwave Spectrometer (SWS) zenith radiance swsrad.b1 v3 and higher

Hyperspectral zenith radiances from the SWS instrument reported at 1 Hz. This data stream contains calibrated, dark-subtracted, radiances from two grating array spectrometers: a Si-detector based spectrometer denoted by SW and an InGaAs based detector denoted by LW. Spectra from both spectrometers are calibrated based on the spectral responsivity determined by reference against NIST-traceable light sources are reported independently as separate arrays having the same time record but wavelength dimension specified for each detector. Because the LW spectrometer is more susceptible to temperature-induced changes, a scale factor adjustment is applied the the LW spectra to yield agreement with the SW spectra over the wavelength range where they overlap. The final radiances incorporate QC to flag saturated values, periods where house-keeping fields fall outside acceptable bounds, and to flag pixels for which the spectral responsivity is not acceptable.

54 ENVIRONMENTAL SCIENCES↗

Brighter-fatter Effect in Near-infrared Detectors—III. Fourier-domain Treatment of Flat Field Correlations and Application to WFIRST

Weak gravitational lensing has emerged as a leading probe of the growth of cosmic structure. However, the shear signal is very small and accurate measurement depends critically on our ability to understand how non-ideal instrumental effects affect astronomical images. The Wide-Field Infrared Survey Telescope (WFIRST) will fly a focal plane containing 18 Teledyne H4RG-10 near-infrared detector arrays, which present different instrument calibration challenges from previous weak lensing observations. Previous work [Paper I: Hirata & Choi, PASP, 132, 014501 (2020); and Paper II: Choi & Hirata, PASP, 132, 014502 (2020)] has shown that correlation functions of flat field images, including cross-correlations between different time slices that are enabled by the non-destructive read capability of the infrared detectors, are effective tools for disentangling linear and nonlinear inter-pixel capacitance (IPC) and the brighter-fatter effect (BFE). Here we present a Fourier-domain treatment of the flat field correlations, which allows us to expand the previous formalism to all orders in IPC, BFE, and classical nonlinearity. We show that biases in simulated flat field analyses in Paper I are greatly reduced through the use of this formalism. We then apply this updated formalism to flat field data from three WFIRST flight candidate detectors, and explore the robustness to variations in the analysis. We find that the BFE is present in all three detectors, and that its contribution to the flat field correlations dominates over the nonlinear IPC, in accordance with the results from Paper II on a development detector. The magnitude of the BFE is such that the effective area of a pixel is increased by (3.54 ± 0.03) × 10 -7 for every electron deposited in a neighboring pixel (sensor chip assembly [SCA] 20829, statistical error, not IPC-deconvolved). We compare IPC maps from flat field autocorrelation measurements to those obtained from the single pixel reset method and find a median difference of 0.113% for SCA 20829. After further diagnosis of this difference, we ascribe it largely to an additional source of cross-talk, the vertical trailing pixel effect, and recommend further work to develop a model for this effect. These results represent a significant step toward calibration of the non-ideal effects in WFIRST detectors.

79 ASTRONOMY AND ASTROPHYSICS↗

A 25 micron-thin microscope for imaging upconverting nanoparticles with NIR-I and NIR-II illumination

Rationale: Intraoperative visualization in small surgical cavities and hard-to-access areas are essential requirements for modern, minimally invasive surgeries and demand significant miniaturization. However, current optical imagers require multiple hard-to-miniaturize components including lenses, filters and optical fibers. These components restrict both the form-factor and maneuverability of these imagers, and imagers largely remain stand-alone devices with centimeter-scale dimensions. Methods: We have engineered INSITE (Immunotargeted Nanoparticle Single-Chip Imaging Technology), which integrates the unique optical properties of lanthanide-based alloyed upconverting nanoparticles (aUCNPs) with the time-resolved imaging of a 25-micron thin CMOS-based (complementary metal oxide semiconductor) imager. We have synthesized core/shell aUCNPs of different compositions and imaged their visible emission with INSITE under either NIR-I and NIR-II photoexcitation. We characterized aUCNP imaging with INSITE across both varying aUCNP composition and 980 nm and 1550 nm excitation wavelengths. To demonstrate clinical experimental validity, we also conducted an intratumoral injection into LNCaP prostate tumors in a male nude mouse that was subsequently excised and imaged with INSITE. Results: Under the low illumination fluences compatible with live animal imaging, we measure aUCNP radiative lifetimes of 600 μs - 1.3 ms, which provides strong signal for time-resolved INSITE imaging. Core/shell NaEr 0.6 Yb 0.4 F 4 aUCNPs show the highest INSITE signal when illuminated at either 980 nm or 1550 nm, with signal from NIR-I excitation about an order of magnitude brighter than from NIR-II excitation. The 55 μm spatial resolution achievable with this approach is demonstrated through imaging of aUCNPs in PDMS (polydimethylsiloxane) micro-wells, showing resolution of micrometer-scale targets with single-pixel precision. INSITE imaging of intratumoral NaEr 0.8 Yb 0.2 F 4 aUCNPs shows a signal-to-background ratio of 9, limited only by photodiode dark current and electronic noise. Conclusion: This work demonstrates INSITE imaging of aUCNPs in tumors, achieving an imaging platform that is thinned to just a 25 μm-thin, planar form-factor, with both NIR-I and NIR-II excitation. Based on a highly paralleled array structure INSITE is scalable, enabling direct coupling with a wide array of surgical and robotic tools for seamless integration with tissue actuation, resection or ablation.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Time domain-induced polarization geophysical data collected in the Rifle Floodplain, Colorado, USA

The IP data set was collected using a time domain-induced polarization (TDIP) method along 65 profiles of various lengths over the floodplain. Surface time domain?induced polarization (TDIP) data was collected to create the 3?D images of the complex electrical resistivity, in terms of magnitude and phase, which are associated with mineral precipitation and other lithological properties. The TDIP data was then used to estimate the spatial distribution of naturally reduced zones, which are known to be biogeochemical hotspots in floodplains having increased uranium and other redox-sensitive metal concentrations as well as high carbon contents. In the TDIP method, the transient decay of voltage is measured after current shut-off, typically in the form of an integral of decay curves over a predefined time window (so-called integral chargeability). TDIP measurements at the site were collected using the Syscal Iris Pro Switch equipment with a square-wave current injection, 50% duty cycle, and a pulse length of 2 s. The integral chargeability measurements were carried out using 20 windows during voltage decay between 240 and 1840 ms after current shut-off. Tomographic measurements were collected by deploying stainless steel electrodes with an electrode separation of 1.8 m and using a dipole-dipole ‘‘skip-2’’ and ‘‘skip-3’’ measuring protocol (i.e., for a dipoles length of 5.4 and 7.2 m, respectively). The sequence of dipole-dipole measurements was carefully arranged to (1) minimize unwanted electromagnetic coupling effects in the data, avoiding potential measurements with electrodes located inside the current dipole, (2) prevent voltage measurements using electrodes, which might be polarized due to previous current injection, and (3) increase the signal-to-noise ratio for an intended exploration depth of 8 m, i.e., the bottom of the aquifer. All measurements were collected as normal and reciprocal pairs for estimation of the data error. The IP measurements were collected with symmetric arrays (i.e., the measuring equipment placed at the center of the electrode array) with a maximum of 36 electrodes, considering that longer profiles revealed a significant increase in the normal-reciprocal misfit for the measurements of the decay curve, probably due to greater impact of electromagnetic coupling on the data. The TDIP data sets were inverted in a twodimensional domain along each transect using CRTomo, which is a smoothness-constraint inversion code based on a finite element algorithm. The resistivity and phase shift values at each pixel were then assigned at the corresponding point within the 3-D floodplain domain (the black rectangle Figure 1b) and used in the 3-D estimation. The TDIP inversion results provided the distribution of the complex resistivity, expressed in terms of its magnitude and phase-shift. The analysis of the normal-reciprocal misfit was used to estimate the relative error. We removed the measurement with smallest voltage difference (<2 mV), representing about 2% variations in the data. For the inversion of TDIP measurements, chargeability values were linearly converted to frequency domain phase values (at the fundamental frequency of 0.125 Hz), by assuming a constant-phase response. This approach has been demonstrated to provide consistent results in previous studies

54 ENVIRONMENTAL SCIENCES↗

Electrostatic subframing and compressive-sensing video in transmission electron microscopy

We present kilohertz-scale video capture rates in a transmission electron microscope, using a camera normally limited to hertz-scale acquisition. An electrostatic deflector rasters a discrete array of images over a large camera, decoupling the acquisition time per subframe from the camera readout time. Total-variation regularization allows features in overlapping subframes to be correctly placed in each frame. Moreover, the system can be operated in a compressive-sensing video mode, whereby the deflections are performed in a known pseudorandom sequence. Compressive sensing in effect performs data compression before the readout, such that the video resulting from the reconstruction can have substantially more total pixels than that were read from the camera. This allows, for example, 100 frames of video to be encoded and reconstructed using only 15 captured subframes in a single camera exposure. We demonstrate experimental tests including laser-driven melting/dewetting, sintering, and grain coarsening of nanostructured gold, with reconstructed video rates up to 10 kHz. The results exemplify the power of the technique by showing that it can be used to study the fundamentally different temporal behavior for the three different physical processes. Both sintering and coarsening exhibited self-limiting behavior, whereby the process essentially stopped even while the heating laser continued to strike the material. We attribute this to changes in laser absorption and to processes inherent to thin-film coarsening. In contrast, the dewetting proceeded at a relatively uniform rate after an initial incubation time consistent with the establishment of a steady-state temperature profile.

36 MATERIALS SCIENCE↗

Beam steering at the nanosecond time scale with an atomically thin reflector

Techniques to mold the flow of light on subwavelength scales enable fundamentally new optical systems and device applications. The realization of programmable, active optical systems with fast, tunable components is among the outstanding challenges in the field. Here, we experimentally demonstrate a few-pixel beam steering device based on electrostatic gate control of excitons in an atomically thin semiconductor with strong light-matter interactions. By combining the high reflectivity of a MoSe 2 monolayer with a graphene split-gate geometry, we shape the wavefront phase profile to achieve continuously tunable beam deflection with a range of 10°, two-dimensional beam steering, and switching times down to 1.6 nanoseconds. Our approach opens the door for a new class of atomically thin optical systems, such as rapidly switchable beam arrays and quantum metasurfaces operating at their fundamental thickness limit.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Design and performance of the first IceAct demonstrator at the South Pole

Here in this paper we describe the first results of IceAct, a compact imaging air-Cherenkov telescope operating in coincidence with the IceCube Neutrino Observatory (IceCube) at the geographic South Pole. An array of IceAct telescopes (referred to as the IceAct project) is under consideration as part of the IceCube-Gen2 extension to IceCube. Surface detectors in general will be a powerful tool in IceCube-Gen2 for distinguishing astrophysical neutrinos from the dominant backgrounds of cosmic-ray induced atmospheric muons and neutrinos: the IceTop array is already in place as part of IceCube, but has a high energy threshold. Although the duty cycle will be lower for the IceAct telescopes than the present IceTop tanks, the IceAct telescopes may prove to be more effective at lowering the detection threshold for air showers. Additionally, small imaging air-Cherenkov telescopes in combination with IceTop, the deep IceCube detector or other future detector systems might improve measurements of the composition of the cosmic ray energy spectrum. In this paper we present measurements of a first 7-pixel imaging air Cherenkov telescope demonstrator, proving the capability of this technology to measure air showers at the South Pole in coincidence with IceTop and the deep IceCube detector.

47 OTHER INSTRUMENTATION↗

Design of a readout circuit incorporating a 12-bit analog-to-digital converter for cooled infrared focal plane array

The infrared focal plane array (IRFPA) is gradually becoming more systematic. In order to enhance the signal processing capabilities, analog-to-digital converters (ADC) integrated into the readout integrated circuit (ROIC) is an important development trend. However, the cryogenic effects of MOSFET devices will affect the conversion accuracy of the ADC at 77 K. In this paper, the main parameters of MOSFET are extracted at 77 K in 0.18 μm CMOS process, and a cryogenic model is established. Based on this, a digital ROIC is designed, which integrates a 12-bit single-slope integral ADC in pixel unit. By applying continuous integral ramp generator and mixed-voltage comparator, a high-linearity and low-power consumption single-slope ADC is realized for the cooled readout circuit. The measured dynamic effective number of bits of the ADC at 77 K is 10.92 bits, the static no-missing code resolution reaches 11.99 bits, the maximum differential nonlinear |DNL| < 1LSB and maximum integral nonlinear |INL| < 1LSB. This paper realizes the design of a digital ROIC for IRFPA and improves the simulation accuracy at 77 K.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

High performance FPGA embedded system for machine learning based tracking and trigger in sPhenix and EIC

We present a comprehensive end-to-end pipeline to classify triggers versus background events in this paper. This pipeline makes online decisions to select signal data and enables the intelligent trigger system for efficient data collection in the Data Acquisition System (DAQ) of the upcoming sPHENIX and future EIC (Electron-Ion Collider) experiments. Starting from the coordinates of pixel hits that are lightened by passing particles in the detector, the pipeline applies three-stage of event processing (hits clustering, track reconstruction, and trigger detection) and labels all processed events with the binary tag of trigger versus background events. The pipeline consists of deterministic algorithms such as clustering pixels to reduce event size, tracking reconstruction to predict candidate edges, and advanced graph neural network-based models for recognizing the entire jet pattern. In particular, we apply the message-passing graph neural network to predict links between hits and reconstruct tracks and a hierarchical pooling algorithm (DiffPool) to make the graph-level trigger detection. We obtain an impressive performance (≥70% accuracy) for trigger detection with only 3200 neuron weights in the end-to-end pipeline. We deploy the end-to-end pipeline into a field-programmable gate array (FPGA) and accelerate the three stages with speedup factors of 1152, 280, and 21, respectively.

Instruments & Instrumentation↗

Robustness of deep learning algorithms in astronomy -- galaxy morphology studies

Deep learning models are being increasingly adopted in wide array of scientific domains, especially to handle high-dimensionality and volume of the scientific data. However, these models tend to be brittle due to their complexity and overparametrization, especially to the inadvertent adversarial perturbations that can appear due to common image processing such as compression or blurring that are often seen with real scientific data. It is crucial to understand this brittleness and develop models robust to these adversarial perturbations. To this end, we study the effect of observational noise from the exposure time, as well as the worst case scenario of a one-pixel attack as a proxy for compression or telescope errors on performance of ResNet18 trained to distinguish between galaxies of different morphologies in LSST mock data. We also explore how domain adaptation techniques can help improve model robustness in case of this type of naturally occurring attacks and help scientists build more trustworthy and stable models.

79 ASTRONOMY AND ASTROPHYSICS↗

High definition large area mapping of geological samples using a Maia detector array in the Nuclear Microprobe

A Maia detector array has been utilized and installed on the CSIRO-MARC Nuclear Microprobe. Maia uses an annular array of 384 silicon detectors to provide a solid-angle of 1.3 sr to improve the collection of X-rays induced by Particle Induced X-ray Emission (PIXE) using a micron focussed MeV proton beam. It features event-by-event data acquisition with dead-time correction and pileup rejection and a total count-rate capacity above 10 M/s, versatile stage and beam scanning modes (coupled to the DAQ-36 system described previously) to cater for a variety of sample configuration and experimental needs, precise measurement of transit time and integration of beam fluence per pixel, and spectral deconvolution of event data in real-time using the Dynamic Analysis method to provide element images during data collection. In this work we demonstrate the system on thin sections made from geological samples extracted from active seafloor hydrothermal vents in the PACMANUS hydrothermal field in Papua New Guinea.

36 MATERIALS SCIENCE↗

Commissioning the H i Observing Mode of the Beam Former for the Cryogenically Cooled Focal L-band Array for the GBT (FLAG)

We present the results of commissioning observations for a new digital beam-forming back end for the Focal plane L-band Array for the Robert C. Byrd Green Bank Telescope (FLAG), a cryogenically cooled Phased Array Feed (PAF) with the lowest measured T {sub sys}/η of any PAF outfitted on a radio telescope to date. We describe the custom software used to apply beam-forming weights to the raw element covariances to create research-quality spectral-line images for the new fine-channel mode, study the stability of the beam weights over time, characterize FLAG’s sensitivity over a frequency range of 150 MHz, and compare the measured noise properties and observed distribution of neutral hydrogen emission from several extragalactic and Galactic sources with data obtained with the current single-pixel L-band receiver. These commissioning runs establish FLAG as the preeminent PAF receiver currently available for spectral-line observations on the world’s major radio telescopes.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Towards High-Efficiency Particle Detection Using Superconducting Microwire Arrays

We present a detailed study of an 8-channel $1\times1$~mm$^{2}$ WSi superconducting microwire single photon detector (SMSPD) array exposed to 120~GeV hadron beam and 120~GeV muon beam at the CERN Super Proton Synchrotron H6 beamline. Following up on our first detailed characterization of the efficiency and response of an SMSPD fabricated on a 3~nm WSi film, we report measurements of enhanced particle detection efficiency using a sensor fabricated from a thicker 4.7~nm-thick WSi film. We also report the first SMSPD detection efficiency measurement made for muons. Measurements are enabled by a silicon tracking telescope providing 10~$\mu$m in situ spatial resolution. The results show a detection efficiency of 75\% and a time resolution of about 130~ps across pixels. These findings represent a significant advancement toward developing high-efficiency SMSPD charged particle tracking systems with simultaneous precision timing, with potential applications in future accelerator-based experiments such as the FCC-ee and Muon Collider.

Wang, Christina [Fermilab]↗

Understanding Formation of Irradiation-Induced Defects through 4D-STEM, Electron Tomography, and WBDF-STEM

A major challenge in advancing nuclear materials for next-generation fission and proposed fusion reactors is to comprehensively understand the formation of irradiation-induced defects. Here it is essential to correlate the evolution of irradiation-induced defects and the degradation of mechanical properties, as they collectively dictate the material's lifespan and ensure nuclear safety. Scanning transmission electron microscopy (STEM) based techniques have emerged as indispensable tools for irradiation-induced defect characterization, offering high spatial resolution imaging and chemical analysis, such as electron energy loss spectroscopy (EELS) and energy dispersive X-ray spectroscopy (EDXS). These techniques have been effectively used to obtain an atomic-scale view of the defect structure. Recent advances in electron microscopy, particularly in 4D-STEM, offer detailed insight into microstructural evolution by capturing full 2D diffraction patterns at every pixel position. Using high-speed direct electron detectors, this technology generates a four-dimensional dataset, overcoming the limitations of traditional STEM imaging.

36 MATERIALS SCIENCE↗

Embedded FPGA developments in 130 nm and 28 nm CMOS for machine learning in particle detector readout

Embedded field programmable gate array (eFPGA) technology allows the implementation of reconfigurable logic within the design of an application-specific integrated circuit (ASIC). This approach offers the low power and efficiency of an ASIC along with the ease of FPGA configuration, particularly beneficial for the use case of machine learning in the data pipeline of next-generation collider experiments. An open-source framework called "FABulous" was used to design eFPGAs using 130 nm and 28 nm CMOS technology nodes, which were subsequently fabricated and verified through testing. The capability of an eFPGA to act as a front-end readout chip was assessed using simulation of high energy particles passing through a silicon pixel sensor. A machine learning-based classifier, designed for reduction of sensor data at the source, was synthesized and configured onto the eFPGA. A successful proof-of-concept was demonstrated through reproduction of the expected algorithm result on the eFPGA with perfect accuracy. Finally, further development of the eFPGA technology and its application to collider detector readout is discussed.

47 OTHER INSTRUMENTATION↗