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NASA NTRS2010

Long-Term Time Series of Remote Sensing Observations for Development of Regulatory Water Quality Standards

Water quality standards in the U.S. consist of: designated uses (the services that a water body provides; e.g., drinking water, aquatic life, harvestable species, recreation) . criteria that define the environmental conditions that must be maintained to support the uses For estuaries and coastal waters in the Gulf of Mexico, there are no numeric (quantitative) criteria to protect designated uses from effects of nutrients. This is largely due to the absence of adequate data that would quantitatively link biological conditions to nutrient concentrations. The Gulf of Mexico Alliance, an organization fostering collaboration between the Gulf States and U.S. Federal agencies, has identified the development of the numeric nutrient criteria as a major step leading to reduction in MODIS Products Figure 6. Map of the Mobile Bay with a yellow patch indicating the Bon Secour Bay area selected in this study for averaging water clarity parameters retrieved from MODIS datasets. nutrient inputs to coastal ecosystems. Nutrient enrichment in estuaries and coastal waters can be quantified based on response variables that measure phytoplankton biomass and water clarity. Long-term, spatially and temporally resolved measurements of chlorophyll a concentration, total concentration of suspended solids, and water clarity are needed to establish reference conditions and to quantify stressor-response relationships.

Blonski, Slawomir↗

NASA NTRS2023

Phytoplankton Diversity and Chemotaxonomy in Contrasting North Pacific Ecosystems

Background. Phytoplankton is the base of majority of ocean ecosystems. It is responsible for half of the global primary production, and different phytoplankton taxa have a unique role in global biogeochemical cycles. In addition, phytoplankton abundance and diversity are highly susceptible to climate induced changes, hence monitoring of phytoplankton and its diversity is important and necessary. Methods. Water samples for phytoplankton and photosynthetic pigment analyses were collected in boreal winter 2017, along transect in the North Pacific Subtropical Gyre (NPSG) and the California Current System (CCS). Phytoplankton community was analyzed using light and scanning electron microscopy and photosynthetic pigments by high-performance liquid chromatography. To describe distinct ecosystems, monthly average satellite data of MODIS Aqua Sea Surface temperature and Chlorophyll a concentration, as well as Apparent Visible Wavelength were used. Results. A total of 207 taxa have been determined, mostly comprised of coccolithophores (35.5%), diatoms (25.2%) and dinoflagellates (19.5%) while cryptophytes, phytoflagellates and silicoflagellates were included in the group ``others" (19.8%). Phytoplankton spatial distribution was distinct, indicating variable planktonic dispersal rates and specific adaptation to ecosystems. Dinoflagellates, and nano-scale coccolithophores dominated NPSG, while micro-scale diatoms, and cryptophytes prevailed in CCS. A clear split between CCS and NPSG is evident in dendogram visualising LINKTREE constrained binary divisive clustering analysis done on phytoplankton counts and pigment oncentrations. Of all pigments determined, alloxanthin, zeaxanthin, divinyl chlorophyll b and lutein have highest correlation to phytoplankton counts. Conclusion. Combining chemotaxonomy and microscopy is an optimal method to determine phytoplankton diversity on a large-scale transect. Distinct communities between the two contrasting ecosystems of North Pacific reveal phytoplankton groups specific adaptations to trophic state, and support the hypothesis of shift from microto nano-scale taxa due to sea surface temperatures rising, favoring stratification and oligotrophic conditions.

oceanography↗

NASA NTRS1991

Event-scale relationships between surface velocity, temperature and chlorophyll in the coastal ocean, as seen by satellite

The overall goal of this project was to increase our understanding of processes which determine the temporally varying distributions of surface chlorophyll pigment concentration and surface temperature in the California Current System (CCS) on the time-scale of 'events', i.e., several days to several weeks. We also proposed to investigate seasonal and regional differences in these events. Additionally, we proposed to evaluate methods of estimating surface velocities and horizontal transport of pigment and heat from sequences of AVHRR and CZCS images. The four specific objectives stated in the original proposal were to: (1) test surface current estimates made from sequences of both SST and color images using variations of the statistical method of Emery et al. (1986) and estimate the uncertainties in these satellite-derived surface currents; (2) characterize the spatial and temporal relationships of chlorophyll and temperature in rapidly evolving features for which adequate imagery exist and evaluate the contribution of these events to monthly and seasonal averages; (3) use the methods tested in (1) to determine the nature of the velocity fields in the CCS; and (4) compare the currents, temperature, and currents in different seasons and in different geographic regions.

Strub, P. Ted↗

NASA NTRS2011

Chlorophyll-a Algorithms for Oligotrophic Oceans: A Novel Approach Based on Three-Band Reflectance Difference

A new empirical algorithm is proposed to estimate surface chlorophyll-a concentrations (Chl) in the global ocean for Chl less than or equal to 0.25 milligrams per cubic meters (approximately 77% of the global ocean area). The algorithm is based on a color index (CI), defined as the difference between remote sensing reflectance (R(sub rs), sr(sup -1) in the green and a reference formed linearly between R(sub rs) in the blue and red. For low Chl waters, in situ data showed a tighter (and therefore better) relationship between CI and Chl than between traditional band-ratios and Chl, which was further validated using global data collected concurrently by ship-borne and SeaWiFS satellite instruments. Model simulations showed that for low Chl waters, compared with the band-ratio algorithm, the CI-based algorithm (CIA) was more tolerant to changes in chlorophyll-specific backscattering coefficient, and performed similarly for different relative contributions of non-phytoplankton absorption. Simulations using existing atmospheric correction approaches further demonstrated that the CIA was much less sensitive than band-ratio algorithms to various errors induced by instrument noise and imperfect atmospheric correction (including sun glint and whitecap corrections). Image and time-series analyses of SeaWiFS and MODIS/Aqua data also showed improved performance in terms of reduced image noise, more coherent spatial and temporal patterns, and consistency between the two sensors. The reduction in noise and other errors is particularly useful to improve the detection of various ocean features such as eddies. Preliminary tests over MERIS and CZCS data indicate that the new approach should be generally applicable to all existing and future ocean color instruments.

Hu, Chuanmin↗

NASA NTRS2021

River streamflow, remotely-sensed water quality, and benthic composition of previously undescribed nearshore coral reefs in northern Puerto Rico

Land-based sediment stress represents a threat to many coral reefs in Puerto Rico primarily as a result of unrestricted land cover/land use changes and poor best management practices. The effects of such stresses have been documented along most coasts around the island. However, little attention has been paid to reefs located on the north coast, and very little is known about their composition and current state. Here, we present a study characterizing riverine inputs, water quality conditions, and benthic composition of two previously undescribed coral reefs (Tómbolo and Machuca reefs) located just eastward of the Río Grande de Manatí outlet in north-central Puerto Rico. This study utilizes a time series of remotely sensed ocean color products (diffuse vertical attenuation coefficient at 490 nm [Kd490] and chlorophyll-a concentration [Chl-a] estimated with data from the Visible Infrared Imaging Radiometer Suite [VIIRS]) to characterize water quality in this coastal region. In general, the months with relatively high mean daily river streamflow also coincide with months having the highest proportion of eastward wave direction, which can promote the eastward influence of river waters towards the two coral reefs sites. Kd490 and Chl-a showed a higher riverine influence closer to the watershed outlet. Kd490 and Chl-a monthly peaks also coincide with river streamflow highs, particularly at those pixels closer to shore. Tómbolo Reef, located farther eastward of the river outlet, shows a well-developed primary reef framework mainly composed of threatened reef-building species (Acropora palmata, Pseudodiploria) and high coral cover (19-51%). The benthos of Machuca Reef, located closer to the river outlet, is dominated by macroalgae with a significantly lower coral cover (0.2-2.7%) mainly composed of “weedy” coral species (Porites astroides, and S. radians). Cover of major benthic components correlates with distance from the river outlet, and with gradients in Kd490 and Chl-a, with higher coral cover and lower macroalgal cover farther from the river outlet. Coral cover at Tómbolo Reef is higher than what has been reported for similar sites around Puerto Rico and other Caribbean islands showing its ecological importance and, as up until now, an unrecognized potential refuge of reef-building threatened coral species.

benthic cover↗

NASA NTRS2012

Dynamic Range and Sensitivity Requirements of Satellite Ocean Color Sensors: Learning from the Past

Sensor design and mission planning for satellite ocean color measurements requires careful consideration of the signal dynamic range and sensitivity (specifically here signal-to-noise ratio or SNR) so that small changes of ocean properties (e.g., surface chlorophyll-a concentrations or Chl) can be quantified while most measurements are not saturated. Past and current sensors used different signal levels, formats, and conventions to specify these critical parameters, making it difficult to make cross-sensor comparisons or to establish standards for future sensor design. The goal of this study is to quantify these parameters under uniform conditions for widely used past and current sensors in order to provide a reference for the design of future ocean color radiometers. Using measurements from the Moderate Resolution Imaging Spectroradiometer onboard the Aqua satellite (MODISA) under various solar zenith angles (SZAs), typical (L(sub typical)) and maximum (L(sub max)) at-sensor radiances from the visible to the shortwave IR were determined. The Ltypical values at an SZA of 45 deg were used as constraints to calculate SNRs of 10 multiband sensors at the same L(sub typical) radiance input and 2 hyperspectral sensors at a similar radiance input. The calculations were based on clear-water scenes with an objective method of selecting pixels with minimal cross-pixel variations to assure target homogeneity. Among the widely used ocean color sensors that have routine global coverage, MODISA ocean bands (1 km) showed 2-4 times higher SNRs than the Sea-viewing Wide Field-of-view Sensor (Sea-WiFS) (1 km) and comparable SNRs to the Medium Resolution Imaging Spectrometer (MERIS)-RR (reduced resolution, 1.2 km), leading to different levels of precision in the retrieved Chl data product. MERIS-FR (full resolution, 300 m) showed SNRs lower than MODISA and MERIS-RR with the gain in spatial resolution. SNRs of all MODISA ocean bands and SeaWiFS bands (except the SeaWiFS near-IR bands) exceeded those from prelaunch sensor specifications after adjusting the input radiance to L(sub typical). The tabulated L(sub typical), L(sub max), and SNRs of the various multiband and hyperspectral sensors under the same or similar radiance input provide references to compare sensor performance in product precision and to help design future missions such as the Geostationary Coastal and Air Pollution Events (GEO-CAPE) mission and the Pre-Aerosol-Clouds-Ecosystems (PACE) mission currently being planned by the U.S. National Aeronautics and Space Administration (NASA).

chlorophyll fluorescence↗

NASA NTRS2001

Optical Measurements and Modeling to Estimate Concentrations and Fluxes of Organic Matter in the Southern Ocean

This project was a collaboration between two Principal Investigators, Dr. Dariusz Stramski and Dr. Greg Mitchell of Scripps Institution of Oceanography, University of California San Diego. Our overall goal was to conduct optical measurements and modeling to estimate concentrations of organic matter in the Southern Ocean in support of the U.S. JGOFS Process Study in this region. Key variables and processes of high relevance to accomplish the JGOFS goals include time and space resolution of phytoplankton pigments, particulate organic carbon, and the formation and export of organic carbon. Our project focused on establishing the fundamental relationships for parameterization of these variables and processes in terms of the optical properties of seawater, and developing understanding of why the Southern Ocean differs from other low-latitude systems, or has differentiation within. Our approach builds upon historical observations that optical properties provide a useful proxy for key reservoirs of organic matter such as chlorophyll alpha (Chl) and particulate organic carbon (POC) concentrations, which are of relevance to the JGOFS objectives. We carried out detailed studies of in situ and water sample optical properties including spectral reflectance, absorption, beam attenuation, scattering, and backscattering coefficients. We evaluated the ability to estimate Chl from the spectral reflectance (ocean color) in the Southern Ocean. We examined relationships between the ocean optical properties and particulate organic carbon. We developed, for the first time, an algorithm for estimating particulate organic carbon concentration in the surface ocean from satellite imagery of ocean color. With this algorithm, we obtained maps of POC distribution in the Southern Ocean showing the seasonal progression of POC in the austral spring-summer season. We also developed a semianalytical reflectance model for the investigated polar waters based on our field measurements of absorption and backscattering coefficients and Chl-dependent parameterizations of these coefficients. With this model, libraries of expected reflectance spectra for various chlorophyll concentrations can be generated with high spectral resolution for specific oceanic regions. In addition, our semianalytical reflectance model provided insight into the mechanisms which drive the empirical relationships between the ocean color and chlorophyll concentration. Our optical approach to the study of pigment and carbon concentrations will be directly relevant to development of system models and long-term monitoring of the Southern Ocean.

Stramski, Dariusz↗

NASA NTRS1972

Apollo 12 lunar material - Effects on plant pigments.

Tissue cultures of tobacco grown for 12 weeks in contact with lunar material returned by Apollo 12 contained 21 to 35% more total pigment than control tissues. This difference is due primarily to increased chlorophyll a concentrations per gram fresh weight of tissue in experimental cultures. No differences were noted in the fresh or dry weight of the experimental and control cultures.

Weete, J. D.↗

NASA NTRS1974

An optical filtering system for remote sensing of phytoplankton and suspended sediment

Aerial photography revealing blue-green Anacystis phytoplankton blooms in the Potomac River is presented. Data scanned were near-IR, green, and yellow nadir radiance; concurrent ground measurements are correlated with these data, including salinity, Secchi disk depth, chlorophyll a concentration, and river depth. In nonbloomed areas, R (radiance) is proportional to the reciprocal of Secchi depth for the green and yellow filters; in bloomed areas, R is constant for the green filter and random for the near-IR and yellow filters.

Bressette, W. E.↗

NASA NTRS1975

Utilization of LANDSAT data for water quality surveys in the Choptank River

Computer processing of LANDSAT-1 multispectral digital data demonstrated the applicability of remotely sensed data to water quality survey in the Choptank River. Water classes derived by automated analysis correlate to river nuisance levels of chlorophyll a and sediment loading as defined by the Maryland Department of Water Resources and the U.S. Corps of Engineers. Results indicate that an increase in chlorophyll a concentration corresponds, relative to MSS 5, to decreases in 4 and increases in 6 relative to the trends with increasing sediment load. It appears that for the purpose of water quality analysis, under favorable atmospheric conditions, only MSS 4, 5 and 6 are necessary.

Johnson, J. M.↗

NASA NTRS1976

Analysis of six broadband optical filters for measuring chlorophyll alpha and suspended solids in the Patuxent River

Kodak Wratten broadband optical filters numbered 47B (400 to 500 nm), 57 (500 to 600 nm), 58 (500 to 600 nm), 12 (500 to 700 nm), 25 (600 to 700 nm), and 89B (690 to 900 nm) were tested on October 17, 1972, to see whether each spectral band by itself could be used to quantify chlorophyll a and suspended sediment in the Patuxent River. Band 690 to 900 nm showed promise in being able to detect gross changes in chlorophyll a above 28 micrograms/l. None of the broad spectral bands seem capable of measuring chlorophyll a concentrations less than 28 micrograms/l in turbid estuarine water. Except for the 47B spectral band, the bands do show promise for measuring suspended solids.

Ohlhorst, C. W.↗

NASA NTRS1977

Application of LANDSAT to the surveillance of lake eutrophication in the Great Lakes basin

The author has identified the following significant results. A step-by-step procedure for establishing and monitoring the trophic status of inland lakes with the use of LANDSAT data, surface sampling, laboratory analysis, and aerial observations were demonstrated. The biomass was related to chlorophyll-a concentrations, water clarity, and trophic state. A procedure was developed for using surface sampling, LANDSAT data, and linear regression equations to produce a color-coded image of large lakes showing the distribution and concentrations of water quality parameters, causing eutrophication as well as parameters which indicate its effects. Cover categories readily derived from LANDSAT were those for which loading rates were available and were known to have major effects on the quality and quantity of runoff and lake eutrophication. Urban, barren land, cropland, grassland, forest, wetlands, and water were included.

Rogers, R. H.↗

NASA NTRS1977

The remote sensing of algae

State agencies need rapid, synoptic and inexpensive methods for lake assessment to comply with the 1972 Amendments to the Federal Water Pollution Control Act. Low altitude aerial photography may be useful in providing information on algal type and quantity. Photography must be calibrated properly to remove sources of error including airlight, surface reflectance and scene-to-scene illumination differences. A 550-nm narrow wavelength band black and white photographic exposure provided a better correlation to algal biomass than either red or infrared photographic exposure. Of all the biomass parameters tested, depth-integrated chlorophyll a concentration correlated best to remote sensing data. Laboratory-measured reflectance of selected algae indicate that different taxonomic classes of algae may be discriminated on the basis of their reflectance spectra.

Thorne, J. F.↗

NASA NTRS1979

Feasibility of remote sensing benthic microalgae

Results of data analyses from multispectral scanning data are presented. The data was collected in July 1977 for concentration of chlorophyll in benthic microalgae (mainly diatoms) on an estuary mudflat.

Zingmark, R. G.↗

NASA NTRS1980

Phytoplankton pigments from the Nimbus-7 Coastal Zone Color Scanner - Comparisons with surface measurements

Algorithms are developed for removing aerosol effects in visual data from the Nimbus-7 Coastal Zone Color Scanner (CZCS). The corrected imagery reveals eddy-like ocean circulation patterns. Pigment concentrations from CZCS are compared with surface determinations. CZCS imagery estimates pigment concentration to within 0.5 log C, where C is the sum of the concentrations of chlorophyll a and phaeopigments a

Gordon, H. R.↗

NASA NTRS1981

Real-time test of MOCS algorithm during Superflux 1980

A remote sensing experiment was conducted in which success depended upon the real-time use of an algorithm, generated from MOCS (multichannel ocean color sensor) data onboard the NASA P-3 aircraft, to direct the NOAA ship Kelez to oceanic stations where vitally needed sea truth could be collected. Remote data sets collected on two consecutive days of the mission were consistent with the sea truth for low concentrations of chlorophyll a. Two oceanic regions of special interest were located. The algorithm and the collected data are described.

Grew, G. W.↗

NASA NTRS1981

Total plankton respiration in the Chesapeake Bay plume

Total plankton respiration (TPR) was measured at 17 stations within the Chesapeake Bay plume off the Virginia coast during March, June, and October 1980. Elevated rates of TPR, as well as higher concentrations of chlorophyll a and phaeopigment a, were found to be associated with the Bay plume during each survey. The TPR rates within the Bay plume were close to those found associated with the Hudson River plume for comparable times of the year. The data examined indicate that the Chesapeake Bay plume stimulates biological activity and is a source of organic loading to the contiguous shelf ecosystem.

Robertson, C. N.↗

NASA NTRS1983

A radiative transfer model for remote sensing of laser induced fluorescence of phytoplankton in non-homogeneous turbid water

A semi-analytic Monte Carlo simulation methodology (SALMON) was discussed. This simulation technique is particularly well suited for addressing fundamental radiative transfer problems in oceanographic LIDAR (optical radar), and also provides a framework for investigating the effects of environmental factors on LIDAR system performance. The simulation model was extended for airborne laser fluorosensors to allow for inhomogeneities in the vertical distribution of constituents in clear sea water. Results of the simulations for linearly varying step concentrations of chlorophyll are presented. The SALMON technique was also employed to determine how the LIDAR signals from an inhomogeneous media differ from those from homogeneous media.

Venable, D. D.↗