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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 235 records · Page 13

Crystal Structure of the PAC1R Extracellular Domain Unifies a Consensus Fold for Hormone Recognition by Class B G-Protein Coupled Receptors

Pituitary adenylate cyclase activating polypeptide (PACAP) is a member of the PACAP/glucagon family of peptide hormones, which controls many physiological functions in the immune, nervous, endocrine, and muscular systems. It activates adenylate cyclase by binding to its receptor, PAC1R, a member of class B G-protein coupled receptors (GPCR). Crystal structures of a number of Class B GPCR extracellular domains (ECD) bound to their respective peptide hormones have revealed a consensus mechanism of hormone binding. However, the mechanism of how PACAP binds to its receptor remains controversial as an NMR structure of the PAC1R ECD/PACAP complex reveals a different topology of the ECD and a distinct mode of ligand recognition. Here we report a 1.9 {angstrom} crystal structure of the PAC1R ECD, which adopts the same fold as commonly observed for other members of Class B GPCR. Binding studies and cell-based assays with alanine-scanned peptides and mutated receptor support a model that PAC1R uses the same conserved fold of Class B GPCR ECD for PACAP binding, thus unifying the consensus mechanism of hormone binding for this family of receptors.

59 BASIC BIOLOGICAL SCIENCES↗

Tricyclic GyrB/ParE (TriBE) Inhibitors. A new class of broad-spectrum dual-targeting antibacterial agents

Increasing resistance to every major class of antibiotics and a dearth of novel classes of antibacterial agents in development pipelines has created a dwindling reservoir of treatment options for serious bacterial infections. The bacterial type IIA topoisomerases, DNA gyrase and topoisomerase IV, are validated antibacterial drug targets with multiple prospective drug binding sites, including the catalytic site targeted by the fluoroquinolone antibiotics. Growing resistance to fluoroquinolones, frequently mediated by mutations in the drug-binding site, is increasingly limiting the utility of this antibiotic class, prompting the search for other inhibitor classes that target different sites on the topoisomerase complexes. The highly conserved ATP-binding subunits of DNA gyrase (GyrB) and topoisomerase IV (ParE) have long been recognized as excellent candidates for the development of dual-targeting antibacterial agents with broad-spectrum potential. However, to date, no natural product or small molecule inhibitors targeting these sites have succeeded in the clinic, and no inhibitors of these enzymes have yet been reported with broad-spectrum antibacterial activity encompassing the majority of Gram-negative pathogens. Using structure-based drug design (SBDD), we have created a novel dual-targeting pyrimidoindole inhibitor series with exquisite potency against GyrB and ParE enzymes from a broad range of clinically important pathogens. Inhibitors from this series demonstrate potent, broad-spectrum antibacterial activity against Gram-positive and Gram-negative pathogens of clinical importance, including fluoroquinolone resistant and multidrug resistant strains. Moreover, lead compounds have been discovered with clinical potential; they are well tolerated in animals, and efficacious in Gram-negative infection models.

59 BASIC BIOLOGICAL SCIENCES↗

Specification of Radionuclide Classes for MELCOR Molten Salt Reactor Simulations

MELCOR has been used extensively to facilitate virtual investigations into severe nuclear accidents for light-water reactors (LWRs). Non-light water reactors (non-LWRs) render some LWR-centric approaches potentially unsuitable. MELCOR has been instrumental in analyzing source terms for LWRs and has recently expanded its applicability to non-LWRs. To simplify radionuclide (RN) tracking, MELCOR currently groups elements into 17 classes, each containing representative species. This grouping, optimized for LWRs, is not appropriate for non-LWRs due to the different chemistry. This necessitates a reevaluation of radionuclide transport modeling. This report introduces a new class scheme for MELCOR tailored to MSR modeling, expanding the current 17 classes to 32 and are explained in the context of a UF 4 fueled FLiBe carrier MSR. It provides a discussion and justification for the new groupings and outlines a methodology for discovering and defining additional classes in MELCOR using a sample calculated RN inventory and a Gibbs energy minimizer (GEM).

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

H α AS A LUMINOSITY CLASS DIAGNOSTIC FOR K- AND M-TYPE STARS

We have identified the H α absorption feature as a new spectroscopic diagnostic of luminosity class in K- and M-type stars. From high-resolution spectra of 19 stars with well-determined physical properties (including effective temperatures and stellar radii), we measured equivalent widths for H α and the Ca ii triplet and examined their dependence on both luminosity class and stellar radius. H α shows a strong relation with both luminosity class and radius that extends down to late M spectral types. This behavior in H α has been predicted as a result of the density-dependent overpopulation of the metastable 2s level in hydrogen, an effect that should become dominant for Balmer line formation in non-LTE conditions. We conclude that this new metallicity-insensitive diagnostic of luminosity class in cool stars could serve as an effective means of discerning between populations such as Milky Way giants and supergiant members of background galaxies.

79 ASTRONOMY AND ASTROPHYSICS↗

LINEAR POLARIZATION OF CLASS I METHANOL MASERS IN MASSIVE STAR-FORMING REGIONS

Class I methanol masers are found to be good tracers of the interaction between outflows from massive young stellar objects with their surrounding media. Although polarization observations of Class II methanol masers have been able to provide information about magnetic fields close to the central (proto)stars, polarization observations of Class I methanol masers are rare, especially at 44 and 95 GHz. We present the results of linear polarization observations of 39 Class I methanol maser sources at 44 and 95 GHz. These two lines are observed simultaneously with one of the 21 m Korean VLBI Network telescopes in single-dish mode. Approximately 60% of the observed sources have fractional polarizations of a few percent in at least one transition. This is the first reported detection of linear polarization of the 44 GHz methanol maser. The two maser transitions show similar polarization properties, indicating that they trace similar magnetic environments, although the fraction of the linear polarization is slightly higher at 95 GHz. We discuss the association between the directions of polarization angles and outflows. We also discuss some targets having different polarization properties at both lines, including DR21(OH) and G82.58+0.20, which show the 90° polarization angle flip at 44 GHz.

79 ASTRONOMY AND ASTROPHYSICS↗

Detection of 36 GHz Class I Methanol Maser Emission toward NGC 4945

We have searched for emission from the 36.2 GHz (4{sub −1}→3{sub 0}E) methanol transition toward NGC 4945, using the Australia Telescope Compact Array. 36.2 GHz methanol emission was detected offset southeast from the Galactic nucleus. The methanol emission is narrow, with a line width <10 km s{sup −1} and a luminosity five orders of magnitude higher than Galactic class I masers from the same transition. These characteristics combined the with physical separation from the strong central thermal emission suggests that the methanol emission is a maser. This emission is a factor of ∼90 more luminous than the widespread emission detected from the Milky Way central molecular zone. This is the fourth detection of extragalactic class I emission and the third detection of extragalactic 36.2 GHz maser emission. These extragalactic class I methanol masers do not appear to be simply highly luminous variants of Galactic class I emission and instead appear to trace large-scale regions of low-velocity shocks in molecular gas, which may precede, or be associated with, the early stages of large-scale star formation.

79 ASTRONOMY AND ASTROPHYSICS↗

Modeling techniques used in the communications link analysis and simulation system (CLASS)

CLASS (Communications Link Analysis and Simulation System) is a software package developed for NASA to predict the communication and tracking performance of the Tracking and Data Relay Satellite System (TDRSS) services. The modeling techniques used in CLASS are described. The components of TDRSS and the performance parameters to be computed by CLASS are too diverse to permit the use of a single technique to evaluate all performance measures. Hence, each CLASS module applies the modeling approach best suited for a particular subsystem and/or performance parameter in terms of model accuracy and computational speed.

Braun, W. R.↗

Validation of the communications link analysis and simulation system (CLASS)

CLASS (Communication Link Analysis and Simulation System) is a software package developed for NASA to predict the communication and tracking performance of the Tracking and Data Relay Satellite System (TDRSS) services. The methods used to verify CLASS are described. The usefulness of a software tool such as CLASS depends strongly on the reliability and accuracy of the results it produces. For this reason, considerable attention was paid to validation throughout the CLASS development.

Braun, W. R.↗

An information measure for class discrimination

This article describes a separability measure for class discrimination. This measure is based on the Fisher information measure for estimating the mixing proportion of two classes. The Fisher information measure not only provides a means to assess quantitatively the information content in the features for separating classes, but also gives the lower bound for the variance of any unbiased estimate of the mixing proportion based on observations of the features. Unlike most commonly used separability measures, this measure is not dependent on the form of the probability distribution of the features and does not imply a specific estimation procedure. This is important because the probability distribution function that describes the data for a given class does not have simple analytic forms, such as a Gaussian. Results of applying this measure to compare the information content provided by three Landsat-derived feature vectors for the purpose of separating small grains from other crops are presented.

Shen, S. S.↗

On a class of nonstationary stochastic processes

A new class of nonstationary stochastic processes is introduced and some of the essential properties of its members are investigated. This class is richer than the class of stationary processes and has the potential of modeling some nonstationary time series. The relation between these newly defined processes with other important classes of nonstationary processes is investigated. Several examples of linearly correlated processes which are not stationary, periodically correlated, or harmonizable are given.

Miamee, A. G.↗

Two classes of models for temporal variability of the Io torus

Two classes of spatially uniform models for the Io torus are analyzed for the stability and temporal variability of the torus. It is shown that stable-equilibrium torus models exist in two classes of models, one with nonlinear radial transport loss of plasma (e.g., from centrifugally driven interchanges) and one with linear transport (e.g., from externally driven interchanges). The two classes of models make substantially different predictions regarding temporal variability of the Io torus. Observational tests are proposed that make it possible to discriminate between the two classes.

Cheng, Andrew F.↗

Classes of ring galaxies generated by dynamical friction

Dynamical friction is incorporated in the numerical modeling of colliding ring galaxies. It is shown that dynamical friction may lead to the capture of an initially unbound companion into a damped oscillatory orbit before ultimately merging with the target disk. In the late stages of its motion the companion may be virtually merged with the main galaxy while rings are still propagating in the disk. This raises the possibility that there exist (at least) two classes of ring galaxies: a class of ring galaxies with separate detached companions in which dynamical friction is too weak to have captured the collider, and a second class with no apparent companion in which the latter has either merged with the target galaxy or has disrupted. These two classes could possibly be identified with O-type and P-type ring galaxies of Few and Madore (1986).

Luban-Lotan, Pnina↗

Design and performance of an analysis-by-synthesis class of predictive speech coders

The performance of a broad class of analysis-by-synthesis linear predictive speech coders is quantified experimentally. The class of coders includes a number of well-known techniques as well as a very large number of speech coders which have not been named or studied. A general formulation for deriving the parametric representation used in all of the coders in the class is presented. A new coder, named the self-excited vocoder, is discussed because of its good performance with low complexity, and because of the insight this coder gives to analysis-by-synthesis coders in general. The results of a study comparing the performances of different members of this class are presented. The study takes the form of a series of formal subjective and objective speech quality tests performed on selected coders. The results of this study lead to some interesting and important observations concerning the controlling parameters for analysis-by-synthesis speech coders.

Rose, Richard C.↗

Using partially labeled data for normal mixture identification with application to class definition

The problem of estimating the parameters of a normal mixture density when, in addition to the unlabeled samples, sets of partially labeled samples are available is addressed. The density of the multidimensional feature space is modeled with a normal mixture. It is assumed that the set of components of the mixture can be partitioned into several classes and that training samples are available from each class. Since for any training sample the class of origin is known but the exact component of origin within the corresponding class is unknown, the training samples as considered to be partially labeled. The EM iterative equations are derived for estimating the parameters of the normal mixture in the presence of partially labeled samples. These equations can be used to combine the supervised and nonsupervised learning processes.

Shahshahani, Behzad M.↗

Antisense and sense expression of cDNA coding for CYP73A15, a class II cinnamate 4-hydroxylase, leads to a delayed and reduced production of lignin in tobacco

A number of plant species contain the class II of genes encoding the cytochrome P450, CYP73, the cognate protein of which cinnamic acid 4-hydroxylase, is the second enzyme of the phenylpropanoid pathway. In order to begin to determine possible functionality, tobacco has been transformed with a truncated French bean class II cinnamate hydroxylase (CYP73A15) in the sense and antisense orientations. Signals for C4H protein could be detected in vascular tissue from wild-type plants using heterologous probes. The transformed plants showed a normal phenotype, even though detectable C4H protein was much reduced in tissue prints. Young propagated transformants displayed a range of reduced C4H activities, as well as either reduced or no phloroglucinol-stainable lignin. However, all mature tobacco plants showed the accumulation of lignin, even though its deposition was apparently delayed. This was not due to induction of tyrosine ammonia-lyase activity, which was not detected, but instead it is presumed due to sufficient C4H residual activity. Analysis of the lignin content of the plants showed reductions of up to 30% with a slightly reduced syringyl to guaiacyl ratio as compared to wild type. This reduction level was favourable in comparison with some other targets in the lignification pathway that have been manipulated including that of class I cinnamate 4-hydroxylase. It is proposed that the class II cinnamate 4-hydroxylase might also function in lignification in a number of species including French bean and tobacco, based on these data.

NASA Discipline Plant Biology↗

Neural network recognition of chemical class information in mobility spectra obtained at high temperatures

A minimal neural network was applied to a large library of high-temperature mobility spectra drawn from 16 chemical classes including 154 substances with 2000 spectra at various concentrations. A genetic algorithm was used to create a representative subset of points from the mobility spectrum as input to a cascade-type back-propagation network. This network demonstrated that significant information specific to chemical class was located in the spectral region near the reactant ions. This network failed to generalize the solution to unfamiliar compounds necessitating the use of complete spectra in network processing. An extended back-propagation network classified unfamiliar chemicals by functional group with a mean for average values of 0.83 without sulfides and 0.79 with sulfides. Further experiments confirmed that chemical class information was resident in the spectral region near the reactant ions. Deconvolution of spectra demonstrated the presence of ions, merged with the reactant ion peaks that originated from introduced samples. The ability of the neural network to generalize the solution to unfamiliar compounds suggests that these ions are distinct and class specific.

NASA Discipline Environmental Health↗

Consumer Expectations of Capacity Constrains and Their Effect on the Demand for Multi-Class Air Travel

This paper argues that a consumer's decision on ticket class takes into account the expected likelihood of obtaining a seat in a particular class which, in turn, partially depends on an optimum "transaction cost". Taking into account the preferences of the consumer and the information that the consumer is endowed with, the consumer will select a ticket that includes its own optimal transaction cost. This motivates the inclusion of the capacity constraint as a proxy independent variable for these consumer expectations This then forms the basis of a model of air-travel demand with specific reference to Australia. A censored likelihood function allowing for correlation in the disturbance term across k classes is introduced. The correlation in the disturbances arises as a result of the interdependence of the capacity constraints in k different ticket classes on each flight.

Battersby, Bryn D.↗

Autonomous Medical Care for Exploration Class Space Missions

The US-based health care system of the International Space Station (ISS) contains several subsystems, the Health Maintenance System, Environmental Health System and the Countermeasure System. These systems are designed to provide primary, secondary and tertiary medical prevention strategies. The medical system deployed in Low Earth Orbit (LEO) for the ISS is designed to enable a "stabilize and transport" concept of operations. In this paradigm, an ill or injured crewmember would be rapidly evacuated to a definitive medical care facility (DMCF) on Earth, rather than being treated for a protracted period on orbit. The medical requirements of the short (7 day) and long duration (up to 6 months) exploration class missions to the Moon are similar to LEO class missions with the additional 4 to 5 days needed to transport an ill or injured crewmember to a DCMF on Earth. Mars exploration class missions are quite different in that they will significantly delay or prevent the return of an ill or injured crewmember to a DMCF. In addition the limited mass, power and volume afforded to medical care will prevent the mission designers from manifesting the entire capability of terrestrial care. NASA has identified five Levels of Care as part of its approach to medical support of future missions including the Constellation program. In order to implement an effective medical risk mitigation strategy for exploration class missions, modifications to the current suite of space medical systems may be needed, including new Crew Medical Officer training methods, treatment guidelines, diagnostic and therapeutic resources, and improved medical informatics.

Hamilton, Douglas↗