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At least 235 records · Page 13

Application of Genetic Algorithm (GA) Assisted Partial Least Square (PLS) Analysis on Trilinear and Non-trilinear Fluorescence Data Sets to Quantify the Fluorophores in Multifluorophoric Mixtures: Improving Quantification Accuracy of Fluorimetric Estimations of Dilute Aqueous Mixtures

Excitation-emission matrix fluorescence (EEMF) and total synchronous fluorescence spectroscopy (TSFS) are the 2 fluorescence techniques that are commonly used for the analysis of multifluorophoric mixtures. These 2 fluorescence techniques are conceptually different and provide certain advantages over each other. The manual analysis of such highly correlated large volume of EEMF and TSFS towards developing a calibration model is difficult. Partial least square (PLS) analysis can analyze the large volume of EEMF and TSFS data sets by finding important factors that maximize the correlation between the spectral and concentration information for each fluorophore. However, often the application of PLS analysis on entire data sets does not provide a robust calibration model and requires application of suitable pre-processing step. The present work evaluates the application of genetic algorithm (GA) analysis prior to PLS analysis on EEMF and TSFS data sets towards improving the precision and accuracy of the calibration model. The GA algorithm essentially combines the advantages provided by stochastic methods with those provided by deterministic approaches and can find the set of EEMF and TSFS variables that perfectly correlate well with the concentration of each of the fluorophores present in the multifluorophoric mixtures. The utility of the GA assisted PLS analysis is successfully validated using (i) EEMF data sets acquired for dilute aqueous mixture of four biomolecules and (ii) TSFS data sets acquired for dilute aqueous mixtures of four carcinogenic polycyclic aromatic hydrocarbons (PAHs) mixtures. In the present work, it is shown that by using the GA it is possible to significantly improve the accuracy and precision of the PLS calibration model developed for both EEMF and TSFS data set. Hence, GA must be considered as a useful pre-processing technique while developing an EEMF and TSFS calibration model.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Predicting the impact of particle-particle collisions on turbophoresis with a reduced number of computational particles

A common feature of wall-bounded turbulent particle-laden flows is enhanced particle concentrations in a thin layer near the wall due to a phenomenon known as turbophoresis. Even at relatively low bulk volume fractions, particle-particle collisions regulate turbophoresis in a critical way, making simulations sensitive to collisional effects. Lagrangian tracking of every particle in the flow can become computationally expensive when the physical number of particles in the system is large. Artificially reducing the number of particles in the simulation can mitigate the computational cost. When particle-particle collisions are an important aspect determining the simulation outcome, as in the case when turbophoresis plays an active role, simply reducing the number of particles in the simulation significantly alters the computed particle statistics. This paper introduces a computational particle treatment for particle-particle collisions which reproduces the results of a full simulation with a reduced number of particles. This is accomplished by artificially enhancing the particle collision radius based on scaling laws for the collision rates. The proposed method retains the use of deterministic collision models and is applicable for both low and high Stokes number regimes.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Accelerated radiation transport modeling techniques for pencil beam computed tomography using gamma rays

Monte Carlo radiation transport modeling studies were performed for a compact, and high-resolution gamma-ray computed tomography system designed for imaging irradiated nuclear fuel. The system comprises a 60 Co source – chosen for its highly penetrating 1173 keV and 1332 keV gamma rays – a pair of high-aspect-ratio pencil beam collimators, and an inorganic scintillator detector. Here two acceleration methods are proposed to rapidly model a transmission type gamma-ray tomography system. The first, a variance reduction technique, is based on performing Monte Carlo simulations with a monodirectionally-biased source, sampled from a characteristic sub-volume of the full source volume. The second acceleration method is based on the deterministic calculations using the Beer–Lambert law and detector response characteristics. Comparison of simulations using acceleration approaches with analog simulations of the fully isotropic, full-volume equivalent, show that the Monte Carlo variance reduction technique gives quantitatively accurate predictions for large collimator aspect ratios while the deterministic calculations are semi-quantitative but converge close to the correct result as the collimator aspect ratio increases. As such, these techniques can be used to reduce the computational cost in generating simulated radiographs and tomographs by several orders of magnitude. Experimental validation efforts are currently underway and will be demonstrated in future work.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Locally defined quantum emission from epitaxial few-layer tungsten diselenide

Recently, single photons have been observed emanating from point defects in two-dimensional (2D) materials including WSe 2 , WS 2 , hexagonal-BN, and GaSe, with their energy residing in the direct electronic bandgap. Here, we report single photon emission from a nominal weakly emitting indirect bandgap 2D material through deterministic strain induced localization. A method is demonstrated to create highly spatially localized and spectrally well-separated defect emission sites in the 750–800 nm regime in a continuous epitaxial film of few-layer WSe 2 synthesized by a multistep diffusion-mediated gas source chemical vapor deposition technique. To separate the effects of mechanical strain from the substrate or dielectric-environment induced changes in the electronic structure, we created arrays of large isotropically etched ultrasharp silicon dioxide tips with spatial dimensions on the order of 10 μm. We use bending based on the small radius of these tips—on the order of 4 nm—to impart electronic localization effects through morphology alone, as the WSe 2 film experiences a uniform SiO 2 dielectric environment in the device geometry chosen for this investigation. When the continuous WSe 2 film was transferred onto an array of SiO 2 tips, an ~87% yield of localized emission sites on the tips was observed. The outcomes of this report provide fundamental guidelines for the integration of beyond-lab-scale quantum materials into photonic device architectures for all-optical quantum information applications.

36 MATERIALS SCIENCE↗

A survey of nonlinear robust optimization

Robust optimization (RO) has attracted great attention from the optimization community over the past decade. RO is dedicated to solving optimization problems subject to uncertainty: design constraints must be satisfied for all the values of the uncertain parameters within a given uncertainty set. Uncertainty sets may be modeled as deterministic sets (boxes, polyhedra, ellipsoids), in which case the RO problem may be reformulated via worst-case analysis, or as families of distributions. The challenge of RO is to reformulate or approximate robust constraints so that the uncertain optimization problem is transformed into a tractable deterministic optimization problem. Most reformulation methods assume linearity of the robust constraints or uncertainty sets of favorable shape, which represents only a fraction of real-world applications. This survey addresses nonlinear RO and includes problem formulations and applications, solution approaches, and available software with code samples.

97 MATHEMATICS AND COMPUTING↗

Analysis of the Zero Relaxation Limit of Hyperbolic Balance Laws with Random Initial Data

We show the convergence of the zero relaxation limit of $2 \times 2$ systems of hyperbolic balance laws with stochastic initial data. Precisely, solutions converge to a solution of the local equilibrium approximation as the relaxation time tends to zero. The initial data are assumed to depend on finitely many random variables, and the convergence is then proved via the appropriate analogues of the compensated compactness methods used in treating the deterministic case. We also demonstrate the validity of this limit in the case of the semilinear $p$-system; the well-posedness of both the system and its equilibrium approximation is proved, and the convergence is shown with no a priori conditions on solutions. Here, this model serves as a prototype for understanding how asymptotic approximations can be used as control variates for hyperbolic balance laws with uncertainty.

$p$-system↗

Impedance Response Influenced by Variability in the Random Distribution of Physical Properties of Coated Materials in Two-Dimensional Space

Heterogeneous physical characteristics of a system featuring a single-layer film on a metallic surface have been explored via its impedance response. The Nyquist plot showed a distorted semicircle, indicative of the system's unique distribution characteristics. Utilizing a copula-based probability method, a two-dimensional deterministic impedance model was successfully integrated, accounting for spatial physical properties such as permittivity and electrical conductivity. This strategy enabled in-depth exploration and mechanistic quantification of a broad spectrum of properties. A quantitative understanding of impedance signal alterations, characterized by normally or log-normally correlated variables, was achieved through the variation in aspect ratio and characteristic frequency of the impedance spectra. Log-normally distributed electrical properties provided a superior representation of the distorted impedance spectra. As coefficient of variation (CV) values fluctuated, the aspect ratio and characteristic frequency showed heightened sensitivity to log-normal permittivity compared to log-normal electrical conductivity. Notably, a marked positive linear correlation between electrical properties resulted in an impedance response that approximated perfect semicircular spectra. The variability in the electrical properties' distribution was demonstrated by considering the correlation coefficient between electrical conductivity and the z-direction position. Furthermore, the highest aspect ratio of the impedance spectra was observed when the electrical conductivity was randomly distributed across the z-direction space.

36 MATERIALS SCIENCE↗

Defining structural limit zones

Method for defining limit loads uses probability distribution of largest load occurring during given time intervals. Method is compatible with both deterministic and probabilistic structural design criteria. It also rationally accounts for fact that longer structure is exposed to random loading environment, greater is possibility that it will experience extreme load.

Merchant, D. H.↗

Horizontal wind estimates deterministically derived from the STS-1 entry flight date--a comparison with available meteorology data

Two wind profiles were determined from STS-1 entry flight data based on preliminary best estimate trajectory (BET). The deterministic process used in deriving the atmospheric winds requires inertial estimates of the spacecraft angle-of-attack (alpha) and side-slip angle (beta) from the BET in conjunction with some air data system measurements of the actual angles. The current orbiter air data system (OADS) provides the necessary alpha information. Two beta profiles were adopted. The first profile assumed that the spacecraft would weathervane into any prevailing wind. The second assumed a conservative side-slip history computed from measured accelerations in the spacecraft body axes. It is shown that there are no major differences between the deterministic winds computed using both methods. Further, comparisons of these winds with raw measurements from Tehachapi, California, and preliminary winds obtained from the LaRC LAIRS file and the JSC/TRW descent BET are presented.

Kelly, G. M.↗

Wind estimation using air data probe measurements to evaluate meteorological measurements made during Space Shuttle entries

Deterministic and weighted least squares methods for obtaining estimates of the horizontal winds encountered during the Shuttle entry phase are described. The estimates are based on in situ Air Data System (ADS) measurements of angle-of-attack, side-slip angle and true airspeed, in conjunction with inertial trajectory parameters obtained from the post flight trajectory reconstruction. Accuracies in the wind estimates obtained from each method are assessed using both theoretical arguments and flight results. Comparisons of derived winds with meteorological measurements taken during the first three Shuttle entries have demonstrated: (1) the usefulness of the wind estimators for evaluating meteorological measurements below 50 kft, and (2) the potential for adequate wind determinations in the absence of independent wind measurements. Comparisons of STS-3 flight-derived L/D versus predicted values from the LaRC aerodynamic data base are presented from 50 kft to touchdown. These results exemplify the importance of such determinations to enhance the ongoing Shuttle aerodynamic and aerothermodynamic research.

Kelly, G. M.↗

Detection of chaotic determinism in time series from randomly forced maps

Time series from biological system often display fluctuations in the measured variables. Much effort has been directed at determining whether this variability reflects deterministic chaos, or whether it is merely "noise". Despite this effort, it has been difficult to establish the presence of chaos in time series from biological sytems. The output from a biological system is probably the result of both its internal dynamics, and the input to the system from the surroundings. This implies that the system should be viewed as a mixed system with both stochastic and deterministic components. We present a method that appears to be useful in deciding whether determinism is present in a time series, and if this determinism has chaotic attributes, i.e., a positive characteristic exponent that leads to sensitivity to initial conditions. The method relies on fitting a nonlinear autoregressive model to the time series followed by an estimation of the characteristic exponents of the model over the observed probability distribution of states for the system. The method is tested by computer simulations, and applied to heart rate variability data.

Non-NASA Center↗

Detection of "noisy" chaos in a time series

Time series from biological system often displays fluctuations in the measured variables. Much effort has been directed at determining whether this variability reflects deterministic chaos, or whether it is merely "noise". The output from most biological systems is probably the result of both the internal dynamics of the systems, and the input to the system from the surroundings. This implies that the system should be viewed as a mixed system with both stochastic and deterministic components. We present a method that appears to be useful in deciding whether determinism is present in a time series, and if this determinism has chaotic attributes. The method relies on fitting a nonlinear autoregressive model to the time series followed by an estimation of the characteristic exponents of the model over the observed probability distribution of states for the system. The method is tested by computer simulations, and applied to heart rate variability data.

Non-NASA Center↗

A Climate Generator for Agricultural Planning in Southeastern South America

A method is described for the generation of climate scenarios in a form suitable for driving agricultural models. The scenarios are tailored to the region in southeastern South America bounded by 25-40 deg S, 45-65 deg W, denoted here as SESA. SESA has been characterized by increasing summer precipitation, particularly during the late 20th century, which, in the context of favorable market conditions, has enabled increases in agricultural production. Since about year 2000, however, the upward tendency appears to have slowed or possibly stopped, raising questions about future climate inputs to regional agricultural yields. The method is not predictive in the deterministic sense, but rather attempts to characterize uncertainty in near-term future climate, taking into account both forced trends and unforced, natural climate fluctuations. It differs from typical downscaling methods in that GCM information is utilized only at the regional scale, subregional variability being modeled based on the observational record. Output, generated on the monthly time scale, is disaggregated to daily values with a weather generator and used to drive soybean yields in the crop model DSSAT-CSM, for which preliminary results are discussed. The simulations produced permit assessment of the interplay between long-range trends and near-term climate variability in terms of agricultural production.

climate simulation↗

An improved target velocity sampling algorithm for free gas elastic scattering

We present an improved algorithm for sampling the target velocity when simulating elastic scattering in a Monte Carlo neutron transport code that correctly accounts for the energy dependence of the scattering cross section. The algorithm samples the relative velocity directly, thereby avoiding a potentially inefficient rejection step based on the ratio of cross sections. Here, we have shown that this algorithm requires only one rejection step, whereas other methods of similar accuracy require two rejection steps. The method was verified against stochastic and deterministic reference results for upscattering percentages in 238 U. Simulations of a light water reactor pin cell problem demonstrate that using this algorithm results in a 3% or less penalty in performance when compared with an approximate method that is used in most production Monte Carlo codes

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

A new method for predicting response in complex linear systems. II

The paper describes convergence and response studies in the low frequency range of complex systems, particularly with low values of damping of different distributions, and reports on the modification of the relaxation procedure required under these conditions. A new method is presented for response estimation in complex lumped parameter linear systems under random or deterministic steady state excitation. The essence of the method is the use of relaxation procedures with a suitable error function to find the estimated response; natural frequencies and normal modes are not computed. For a 45 degree of freedom system, and two relaxation procedures, convergence studies and frequency response estimates were performed. The low frequency studies are considered in the framework of earlier studies (Kayser and Bogdanoff, 1975) involving the mid to high frequency range.

Bogdanoff, J. L.↗

Machine Learning Methods for Connection RTT and Loss Rate Estimation Using MPI Measurements Under Random Losses

Scientific computations are expected to be increasingly distributed across wide-area networks, and Message Passing Interface (MPI) has been shown to scale to support their communications over long distances. Application-level measurements of MPI operations reflect the connection Round-Trip Time (RTT) and loss rate, and machine learning methods have been previously developed to estimate them under deterministic periodic losses. In this paper, we consider more complex, random losses with unform, Poisson and Gaussian distributions. We study five disparate machine leaning methods, with linear and non-linear, and smooth and non-smooth properties, to estimate RTT and loss rate over 10Gbps connections with 0-366ms RTT. The diversity and complexity of these estimators combined with the randomness of losses and TCP’s non-linear response together rule out the selection of a single best among them; instead, we fuse them to retain their design diversity. Overall, the results show that accurate estimates can be generated at low loss rates but become inaccurate at loss rates 10% and higher, thereby illustrating both their strengths and limitations.

Generalization Bounds↗

A comparison of methods for DPLL loop filter design

Four design methodologies for loop filters for a class of digital phase-locked loops (DPLLs) are presented. The first design maps an optimum analog filter into the digital domain; the second approach designs a filter that minimizes in discrete time weighted combination of the variance of the phase error due to noise and the sum square of the deterministic phase error component; the third method uses Kalman filter estimation theory to design a filter composed of a least squares fading memory estimator and a predictor. The last design relies on classical theory, including rules for the design of compensators. Linear analysis is used throughout the article to compare different designs, and includes stability, steady state performance and transient behavior of the loops. Design methodology is not critical when the loop update rate can be made high relative to loop bandwidth, as the performance approaches that of continuous time. For low update rates, however, the miminization method is significantly superior to the other methods.

Aguirre, S.↗