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NASA NTRS2007

Identification of Human-Induced Changes in Atmospheric Moisture Content

Data from the satellite-based Special Sensor Microwave Imager (SSM/I) show that the total atmospheric moisture content over oceans has increased by 0.41 kg/sq m per decade since 1988. Results from current climate models indicate that water vapor increases of this magnitude cannot be explained by climate noise alone. In a formal detection and attribution analysis using the pooled results from 22 different climate models, the simulated "fingerprint" pattern of anthropogenically caused changes in water vapor is identifiable with high statistical confidence in the SSM/I data. Experiments in which forcing factors are varied individually suggest that this fingerprint "match" is primarily due to human-caused increases in greenhouse gases and not to solar forcing or recovery from the eruption of Mount Pinatubo. Our findings provide preliminary evidence of an emerging anthropogenic signal in the moisture content of earth's atmosphere.

Santer, B.D.↗

NASA NTRS2009

A Comprehensive Characterization of Microorganisms and Allergens in Spacecraft Environment

The determination of risk from infectious disease during long-duration missions is composed of several factors including the concentration and the characteristics of the infectious agent. Thus, a thorough knowledge of the microorganisms aboard spacecraft is essential in mitigating infectious disease risk to the crew. While stringent steps are taken to minimize the transfer of potential pathogens to spacecraft, several medically significant organisms have been isolated from both the Mir and International Space Station (ISS). Historically, the method for isolation and identification of microorganisms from spacecraft environmental samples depended upon their growth on culture media. Unfortunately, only a fraction of the organisms may grow on a culture medium, potentially omitting those microorganisms whose nutritional and physical requirements for growth are not met. Thus, several pathogens may not have been detected, such as Legionella pneumophila, the etiological agent of Legionnaire s disease. We hypothesize that environmental analysis using non-culture-based technologies will reveal microorganisms, allergens, and microbial toxins not previously reported in spacecraft, allowing for a more complete health assessment. The development of techniques for this flight experiment, operationally named SWAB, has already provided advances in NASA laboratory processes and beneficial information toward human health risk assessment. The translation of 16S ribosomal DNA sequencing for the identification of bacteria from the SWAB experiment to nominal operations has increased bacterial speciation of environmental isolates from previous flights three fold compared to previous conventional methodology. The incorporation of molecular-based DNA fingerprinting using repetitive sequence-based polymerase chain reaction (rep-PCR) into the capabilities of the laboratory has provided a methodology to track microorganisms between crewmembers and their environment. Both 16S ribosomal DNA identification and bacterial fingerprinting have improved NASA s capability to better understand spacecraft environments and determine the source of contamination events. Preflight sampling has been completed for air, surface, and water samples. In-flight sample collection has been completed for a total of 8 air and surface sample collection sessions. In-flight hardware has performed well and the surface sampling device received positive feedback from the crew for its ease of use. While processing and analysis continue for these samples, early results have begun to provide information on the spacecraft environment. Using a method called Denaturing Gradient Gel Electrophoresis (DGGE), several air and samples were evaluated to determine the types of organisms that were present. Using only molecular techniques, DGGE does not depend on any microbial growth on culture media, allowing a more comprehensive assessment of the spacecraft interior. Preliminary results have identified several microorganisms that would not have been isolated using current technology, though none of these organisms would be considered medically significant. Interestingly, the isolation of Gram negative organisms is greater using DGGE than conventional media based isolation. The cause of this finding is unclear, though it may be the result of the technique s ability to isolate both viable and non-viable bacteria. The next phase of the SWAB sample analysis is the use of quantitative polymerase chain reaction (QPCR) to look for specific medically significant organisms. While not as broad as DGGE, QPCR is much more sensitive and may reveal findings that were not seen during the initial evaluation. Together, this information will lead toward an accurate microbial risk assessment to help set flight requirements to protect the safety, health, and performance of the crew.

Castro, V.A.↗

NASA NTRS2009

Use of UV Sources for Detection and Identification of Explosives

Measurement of Raman and native fluorescence emission using ultraviolet (UV) sources (<400 nm) on targeted materials is suitable for both sensitive detection and accurate identification of explosive materials. When the UV emission data are analyzed using a combination of Principal Component Analysis (PCA) and cluster analysis, chemicals and biological samples can be differentiated based on the geometric arrangement of molecules, the number of repeating aromatic rings, associated functional groups (nitrogen, sulfur, hydroxyl, and methyl), microbial life cycles (spores vs. vegetative cells), and the number of conjugated bonds. Explosive materials can be separated from one another as well as from a range of possible background materials, which includes microbes, car doors, motor oil, and fingerprints on car doors, etc. Many explosives are comprised of similar atomic constituents found in potential background samples such as fingerprint oils/skin, motor oil, and soil. This technique is sensitive to chemical bonds between the elements that lead to the discriminating separability between backgrounds and explosive materials.

Hug, William↗

NASA NTRS2015

External Influences on Modeled and Observed Cloud Trends

Understanding the cloud response to external forcing is a major challenge for climate science. This crucial goal is complicated by intermodel differences in simulating present and future cloud cover and by observational uncertainty. This is the first formal detection and attribution study of cloud changes over the satellite era. Presented herein are CMIP5 (Coupled Model Intercomparison Project - Phase 5) model-derived fingerprints of externally forced changes to three cloud properties: the latitudes at which the zonally averaged total cloud fraction (CLT) is maximized or minimized, the zonal average CLT at these latitudes, and the height of high clouds at these latitudes. By considering simultaneous changes in all three properties, the authors define a coherent multivariate fingerprint of cloud response to external forcing and use models from phase 5 of CMIP (CMIP5) to calculate the average time to detect these changes. It is found that given perfect satellite cloud observations beginning in 1983, the models indicate that a detectable multivariate signal should have already emerged. A search is then made for signals of external forcing in two observational datasets: ISCCP (International Satellite Cloud Climatology Project) and PATMOS-x (Advanced Very High Resolution Radiometer (AVHRR) Pathfinder Atmospheres - Extended). The datasets are both found to show a poleward migration of the zonal CLT pattern that is incompatible with forced CMIP5 models. Nevertheless, a detectable multivariate signal is predicted by models over the PATMOS-x time period and is indeed present in the dataset. Despite persistent observational uncertainties, these results present a strong case for continued efforts to improve these existing satellite observations, in addition to planning for new missions.

clouds (meteorology)↗

NASA NTRS2018

The Chaotic Long-Term X-Ray Variability of 4U 1705-44

The low-mass X-ray binary 4U1705-44 exhibits dramatic long-term X-ray time variability with a time-scale of several hundred days. The All-SkyMonitor (ASM) aboard the Rossi X-ray Timing Explorer (RXTE) and the Japanese Monitor of All-sky X-ray Image (MAXI) aboard the International Space Station together have continuously observed the source from 1995 December through 2014 May. The combined ASM-MAXI data provide a continuous time series over 50 times the length of the time-scale of interest. Topological analysis can help us identify 'fingerprints' in the phase space of a system unique to its equations of motion. The Birman-Williams theorem postulates that if such fingerprints are the same between two systems, then their equations of motion must be closely related. The phase-space embedding of the source light curve shows a strong resemblance to the double-welled non-linear Duffing oscillator. We explore a range of parameters for which the Duffing oscillator closely mirrors the time evolution of 4U1705-44. We extract low period, unstable periodic orbits from the 4U1705-44 and Duffing time series and compare their topological information. The Duffing and 4U1705-44 topological properties are identical, providing strong evidence that they share the same underlying template. This suggests that we can look to the Duffing equation to help guide the development of a physical model to describe the long-term X-ray variability of this and other similarly behaved X-ray binary systems.

Rossi X-ray Timing Explorer (RXTE)↗

NASA NTRSDate not supplied

A New, Efficient, and Consistent Method for Generating Climate Data Record from Operational Hyperspectral Sounder Instruments on AQUA, S-NPP and NOAA 20

Operational IR sounders such AIRS on NASA Aqua, CrIS on S-NPP and on NOAA 20 satellites provide high quality hyperspectral measurements for weather and climate applications. Climate products are typically derived by performing spatial and temporal averaging of level-2 products. It is a time-consuming process to generate level-2 data products since modern hyperspectral satellite sensors have millions of observations each day with thousands of spectral channels for each observation. Additionally, differences in level-2 retrieval algorithms for different satellite sensors can lead to errors in the climate products. We have developed a Climate Fingerprinting Sounder Product (ClimFiSP), which is derived from spatiotemporally averaged level-1 hyperspectral radiances directly. The ClimFiSP algorithm uses consistent radiative kernels and a robust spectral fingerprinting method. It can provide fast and accurate data fusion products from multiple satellite sensors. We have applied this method to both AIRS and CrIS (on SNPP and on NOAA 20) data and generated two decades climate data records for atmospheric temperature, water vapor, cloud, trace gases, and surface skin temperature. The ClimFiSP are being transitioned to NASA data centers for routine generations level-3 products.

Xu Liu↗

NASA NTRSDate not supplied

All-sky Retrieval of Atmospheric Temperature, Water Vapor, Clouds, Trace Gases, and Surface Properties from Operational Hyperspectral IR Sounders

Operational IR sounders such AIRS, CrIS, and IASI provide high quality hyperspectral measurements for weather and climate applications. We will describe a new all-sky Single Field-of-view Sounder Atmospheric Product (SiFSAP). The uniqueness of this product is that it uses all available channels from hyperspectral sounders and the optimal estimation retrieval is done at a single FOV spatial resolution. The SiFSAP includes atmospheric temperature, water vapor, clouds, trace gases, surface skin, and surface emissivity and will be produced operationally at NASA GES DISC. We will describe the core component of the SiFSAP algorithm, which is the Principal Component-based Radiative Transfer Model (PCRTM), and will show example applications of the SiFSAP product for various atmospheric weather and dynamics studies. We also describe a new Climate Fingerprinting Sounder Product (ClimFiSP), which is derived from spatiotemporally averaged level-1 hyperspectral radiances directly. The ClimFiSP algorithm uses consistent radiative kernels and a robust spectral fingerprinting method. It provides fast and accurate data fusion products from multiple satellite sensors. We have applied this method to both AIRS and CrIS (on SNPP and on NOAA 20) data and generated two decades climate data records for atmospheric temperature, water vapor, cloud, trace gases, and surface skin temperature. The ClimFiSP are being transitioned to NASA data centers for routine generations level-3 products.

pcrtm↗

NASA NTRSDate not supplied

Climate Data Record Derived from Hyperspectral Sounders on AQUA, S-NPP and NOAA 20

Climate products are typically derived by performing spatial and temporal averaging of level-2 products. It is a time-consuming process to generate level-2 data products since modern hyperspectral satellite sensors have millions of observations each day with thousands of spectral channels for each observation. Additionally, differences in level-2 retrieval algorithms for different satellite sensors can lead to errors in the climate products. We have developed a Climate Fingerprinting Sounder Product (ClimFiSP), which is derived from spatiotemporally averaged level-1 hyperspectral radiances directly. The ClimFiSP algorithm uses consistent radiative kernels and a robust spectral fingerprinting method. It provides accurate data climate data fusion products from multiple satellite sensors. It eliminates or reduces the errors due to inconsistent L2 algorithms. We have applied this method to both AIRS and CrIS (on SNPP and on NOAA 20) data and generated two decades climate data records for atmospheric temperature, water vapor, cloud, trace gases, and surface skin temperature. The ClimFiSP are being transitioned to NASA data centers for routine generations level-3 products.

climate data record↗

NASA NTRSDate not supplied

20-Years of Atmospheric Temperature, Water Vapor, Cloud, and Surface Temperature Anomalies and Trends Derived From Operational Hyperspectral Ir Sounders

Hyperspectral IR sounders such as AIRS on Aqua, CrIS on S-NPP, NOAA20 and JPSS-2, IASI on Metop A, B, and C provide high-quality atmospheric temperature, water, vapor, and greenhouse gas vertical profiles. Additionally, they provide atmospheric cloud properties, surface emissivity, and surface skin temperatures. We have developed two algorithms which can consistently derive these products from multiple IR sounders. The first one is a Single Field-of-view Sounder Atmospheric Product (SIFSAP) algorithm and the second one is a Climate Fingerprinting Sounder Product (ClimFiSP) algorithm. Compared to current operational AIRS and CrIS Level-2 (L2) algorithms, which perform one retrieval for each 3 by 3 field of views (FOVs) using a cloud-clearing approach, the SiFSAP algorithm, on the other hand, performs one retrieval for each FOV using an all-sky optimal estimation approach. The SiFSAP algorithm retrieves all the above-mentioned atmosphere and surface properties simultaneously including cloud properties with 3-time higher spatial resolution and 9-times more products. The core of the SiFSAP algorithm is an accurate and fast Principal Component-based Radiative Transfer Model (PCRTM), which can calculate hyperspectral radiance spectra under both clear and cloudy conditions. The PCRTM was developed in the past decade using consistent reference line-by-line radiative transfer model and spectroscopy for hyperspectral sounders such as AIRS, CrIS, IASI, NAST-I, and S-HIS. The SiFSAP retrieval algorithm also uses the same climatology a priori and associated covariances, which makes it ideal for generating high quality products for both weather and climate applications. Climate products are typically derived by performing spatial and temporal averaging of L2 products. It is a time-consuming process to generate L2 data products since AIRS, CrIS, and IASI have millions of observations each day with thousands of spectral channels for each observation. Additionally, differences in L2 retrieval algorithms for different satellite sensors can lead to errors in the climate products. Our ClimFiSP algorithm, which performs retrievals from spatiotemporally averaged L1 hyperspectral radiances directly, will be orders of magnitude faster than traditional method. he ClimFiSP algorithm uses consistent radiative kernels and a robust spectral fingerprinting method. It provides accurate data climate data fusion products from multiple satellite sensors. We have applied this method to both AIRS and CrIS (on SNPP and on NOAA 20) data and generated two decades climate data records for atmospheric temperature, water vapor, cloud, trace gases, and surface skin temperature. Both SiFSAP and ClimFiSP will be available at NASA GES DISC data center for public access.

Xu Liu↗

NASA NTRSDate not supplied

Deriving a Suite of Climate Data Records from 21-years of Sounder Observations

Two retrieval algorithms, a Single Field-of-view Sounder Atmospheric Product (SiFSAP) Level 2 algorithm and a Climate Fingerprinting Sounder Product (ClimFiSP) Level 3 algorithm, have been developed at NASA Langley Research Center. In this presentation, we will demonstrate the radiance closure build into these two algorithms. This is possible due to the use of a principal-component-based radiative transfer model (PCRTM). The PCRTM enables the inclusion of all available spectral information from hyperspectral IR sounders. It also has fast and accurate capability of modeling observed cloudy radiance spectra directly. The SiFSAP, which fits sounder radiance spectra using PCRTM as forward model and an optimal estimation as inverse model, has 3-times higher spatial resolution and 9-times denser data products comparing to current NASA and NOAA operational IR sounder products. With great support from NASA sounder SIPS, the SiFSAP algorithm has been delivered to NASA GES DISC for L2 and L3 data generation and releasing. The ClimFiSP uses a spectral fingerprinting method to directly generate L3 data products from spatiotemporally averaged L1 data. The goal of ClimFiSP is to generate high-quality climate data records (CDRs) from multiple IR sounders (e.g. Aqua AIRS, SNPP CrIS, NOAA-20 and NOAA-21 CrIS) using a consistent retrieval methodology. Using CHIRP L1 data, we have generated 20-years of CDRs for atmospheric temperature, water vapor, and trace gas profiles, as well as cloud and surface properties. The algorithm will be transitioned to Sounder SIPS soon and eventually to NASA GES DISC.

Xu Liu↗

NASA NTRSDate not supplied

Newly Available Single Field-of-view Sounder Atmospheric Product (SiFSAP) and Its Derivative Product

The Single Field-of-view Sounder Atmospheric product (SiFSAP) has been developed and delivered to NASA GES DISC. The SiFSAP Algorithm Theoretical Basis Documents (ATBD) and users manuals are ready to be released to public. This novel data product supplements other operational products such as AIRS version 7 and the Community Long-term Infrared Microwave Combined Atmospheric Product System (CLIMCAPS) from two main perspectives: 1) improving the spatial resolution of sounder Level-2 data to extend its usage in weather and dynamics focus area; 2) establishing radiance closure between Level-2 data and directly measured Level-1 radiances to facilitate the climate trend analysis. SiFSAP has 3-times higher spatial resolution and 9-times denser data products comparing to current NASA and NOAA operational IR sounder products. SiFSAP is derived using the optimal estimation method based physical retrieval algorithm. The Principal Component-based Radiative Transfer Model (PCRTM) which includes the cloud scattering simulation is used for the forward model so that the solution can fit the spectral radiances under all-sky conditions for individual single field-of-view (SFOV) measurements. A general introduction of the SiFSAP algorithm and corresponding validation work will be presented. Also introduced here is the Climate Fingerprinting Sounder product (ClimFiSP) that is the derivative product of SiFSAP and will be released in the near future. The ClimFiSP algorithm uses pre-constructed fingerprinting relationship to achieve a low-latency Level-3 data production and facilitate the fusion of data of different sounders.

Wan Wu↗

NASA NTRSDate not supplied

Two Decades of Atmospheric and Surface Temperature, Water Vapor, and Cloud Trends Derived from Satellite Remote Sensors

Satellite remote sensor such as Atmospheric Infrared Sounder (AIRS), Cross-track Infrared Sounder (CrIS), and Infrared Atmospheric Sounding Interferometer (IASI) provide high-quality atmospheric temperature, water, vapor, and greenhouse gas vertical profiles. Additionally, they provide atmospheric cloud properties, surface emissivity, and surface skin temperatures. We have developed two algorithms which can consistently derive these products from multiple IR sounders. The first one is a Single Field-of-view Sounder Atmospheric Product (SIFSAP) algorithm and the second one is a Climate Fingerprinting Sounder Product (ClimFiSP) algorithm. Compared to current operational AIRS and CrIS Level-2 (L2) algorithms, which perform one retrieval for each 3 by 3 field of views (FOVs) using a cloud-clearing approach, the SiFSAP algorithm, on the other hand, performs one retrieval for each FOV using an all-sky optimal estimation approach. The SiFSAP algorithm retrieves all the above-mentioned atmosphere and surface properties simultaneously including cloud properties with 3-time higher spatial resolution and 9-times more products. Climate products are typically derived by performing spatial and temporal averaging of L2 products. It is a time-consuming process to generate L2 data products since AIRS, CrIS, and IASI have millions of observations each day with thousands of spectral channels for each observation. Additionally, differences in L2 retrieval algorithms for different satellite sensors can lead to errors in the climate products. Our ClimFiSP algorithm, which performs retrievals from spatiotemporally averaged L1 hyperspectral radiances directly, will be orders of magnitude faster than traditional method. he ClimFiSP algorithm uses consistent radiative kernels and a robust spectral fingerprinting method. It provides accurate data climate data fusion products from multiple satellite sensors. We have applied this method to both AIRS and CrIS (on SNPP and on NOAA 20) data and generated two decades climate data records for atmospheric temperature, water vapor, cloud, trace gases, and surface skin temperature. Both SiFSAP and ClimFiSP will be available at NASA GES DISC data center for public access.

remote sensing↗

NASA NTRSDate not supplied

Remote Sensing of Atmospheric Temperature, Water Vapor, Trace Gases, Cloud, and Surface Properties on Daily and Decadal Time Scales

Xu Liu↗

NASA NTRSDate not supplied

Generating Essential Climate Variables from Multiple Satellite Hyperspectral Remote Sensors

Hyperspectral observations from satellite-based sensors provide high information content for the Earth’s atmospheric and surface properties. Traditionally, long-term climate products are derived by performing spatial and temporal averaging of level-2 satellite products. There are two shortcomings of this approach. First, it is a time-consuming process to generate level-2 data products since modern hyperspectral satellite sensors have millions of observations each day with thousands of spectral channels for each observation. Secondly, differences in level-2 retrieval algorithms can lead to errors in the fused multi-satellite data. We have developed a radiometrically consistent spectral fingerprinting method, which overcomes the above-mentioned shortcomings, to derive climate change signals from multiple satellite sensors using spatiotemporally averaged level-1 data. We have applied this method to data collected from Atmospheric Infrared Sounder (AIRS) on Aqua satellite and Cross-track Infrared Sounder (CrIS) on SNPP and NOAA20 and generated decade-long climate data records for atmospheric temperature, water vapor, cloud, trace gases, and surface skin temperature. A key component to this work is a set of observational-based radiative kernels produced from CrIS level-1 data using a single field of view (SFOV) optimal estimation retrieval algorithm. Only limited CrIS level-1 data (e.g., 1-2 years of data) are needed to the derive radiative kernels. Our Principal Component-based Radiative Model (PCRTM) enables us to perform SFOV retrievals under all sky conditions and provides radiative kernels (including those for clouds) needed by the spectral fingerprinting method. In this presentation, we will describe the basic methodology, the details of the algorithm, and results from NASA Aqua AIRS and Suomi-NPP CrIS data. The method can be applied to study future hyperspectral remote sensors such as CLARREO (Climate Absolute Radiance and Refractivity Observatory) Pathfinder (CPF), Tropospheric Emissions: Monitoring of Pollution (TEMPO), Surface Biology and Geology (SBG), Atmosphere Observing System (AOS).

Xu Liu↗

NASA NTRSDate not supplied

Development of Radiative Transfer Models and Retrieval Algorithms for Satellite Remote Sensors

Xu Liu↗

DOE OSTI2022

AIMSim : An accessible cheminformatics platform for similarity operations on chemicals datasets

The recent advances in deep learning, generative modeling, and statistical learning have ushered in a renewed interest in traditional cheminformatics tools and methods. Quantifying molecular similarity is essential in molecular generative modeling, exploratory molecular synthesis campaigns, and drug-discovery applications to assess how new molecules differ from existing ones. Further, most tools target advanced users and lack general implementations accessible to the larger community. In this work, we introduce Artificial Intelligence Molecular Similarity (AIMSim), an accessible cheminformatics platform for performing similarity operations on collections of molecules called molecular datasets. AIMSim provides a unified platform to perform similarity-based tasks on molecular datasets, such as diversity quantification, outlier and novelty analysis, clustering, dimensionality reduction, and inter-molecular comparisons. AIMSim implements all major binary similarity metrics and molecular fingerprints and is provided as a Python package that includes support for command-line use as well as a Graphical User Interface for code-free utilization with fully interactive plots.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2024

Invariant Molecular Representations for Heterogeneous Catalysis

Catalyst screening is a critical step in the discovery and development of heterogeneous catalysts, which are vital for a wide range of chemical processes. In recent years, computational catalyst screening, primarily through density functional theory (DFT), has gained significant attention as a method for identifying promising catalysts. However, the computation of adsorption energies for all likely chemical intermediates present in complex surface chemistries is computationally intensive and costly due to the expensive nature of these calculations and the intrinsic idiosyncrasies of the methods or data sets used. This study introduces a novel machine learning (ML) method to learn adsorption energies from multiple DFT functionals by using invariant molecular representations (IMRs). To do this, we first extract molecular fingerprints for the reaction intermediates and later use a Siamese-neural-network-based training strategy to learn invariant molecular representations or the IMR across all available functionals. Our Siamese network-based representations demonstrate superior performance in predicting adsorption energies compared with other molecular representations. Notably, when considering mean absolute values of adsorption energies as 0.43 eV (PBE-D3), 0.46 eV (BEEF-vdW), 0.81 eV (RPBE), and 0.37 eV (scan+rVV10), our IMR method has achieved the lowest mean absolute errors (MAEs) of 0.18 0.10, 0.16, and 0.18 eV, respectively. These results emphasize the superior predictive capacity of our Siamese network-based representations. The empirical findings in this study illuminate the efficacy, robustness, and dependability of our proposed ML paradigm in predicting adsorption energies, specifically for propane dehydrogenation on a platinum catalyst surface.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2022

PUF-Based Two-Factor Authentication Protocol for Securing the Power Grid Against Insider Threat

Recent advances in smart grid technologies have enabled additional distributed control paradigms that allow more efficient and reliable operation. However, this creates new security concerns for the grid, such as attackers using spoofed grid control devices to generate false measurements. This paper introduces a two-factor authentication protocol leveraging standard public-key cryptography as one authentication factor and a hardware-based fingerprint, known as a Physical Unclonable Function, as a second authentication factor. This protocol incurs a small overhead and prevents cyber-attacks even when an adversary is able to compromise the cryptographic keys stored in the non-volatile memory of an intelligent control device.

42 ENGINEERING↗