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DOE OSTI2021

Integrated Models for Electrical Distribution Network Planning and District-Scale Building Energy Use

The increase of greenhouse emissions caused by a rise in global energy consumption is pushing the scientific community to develop tools that address key environmental, techno-economic and social issues. One specific area of focus is to create tools that enable the design of high-performance energy districts, including grid-interactive efficient buildings and electrical distribution infrastructure. This paper outlines the approach of integrating a synthetic distribution network tool (RNM-US) with URBANopt™, a modular and customizable software development kit for thermal and electrical modelling of buildings and energy systems at a district scale. First, we describe the algorithms implemented to integrate RNM-US with URBANopt to automatically generate the distribution network for the district considered. Following, we present a case study for the potential uses of the RNM-US integrations with URBANopt, highlighting the capabilities for economic and technical analysis of the distribution network built in relation to the electricity needs of the modelled buildings.

30 DIRECT ENERGY CONVERSION↗

NASA NTRS2024

Platte River Water Resources: Assessing Urban Flood Vulnerability to Select Restoration Sites for Urban Woods and Prairies in the Great Plains

In the Platte River Basin, wetlands provide ecosystem services such as flood mitigation and wildlife habitat. However, increasing urban development in the area has impacted natural floodplain processes, leading to a decline in wildlife habitat and an elevated flood risk for nearby communities. To address this issue, Audubon Great Plains’ Urban Woods and Prairies (UWP) Initiative focuses on restoring vital habitats within urban areas to protect bird species and reduce flood hazards. Our project used remotely sensed data, including Landsat 8 Operational Land Imagery (OLI), Sentinel-2 Multispectral Instrument (MSI), and Sentinel-1 Synthetic Aperture Radar (SAR), to assess land use and land cover from 2013 to 2023, as well as flood extent. Broad-scale analysis of the LULC showed some changes in land use patterns across the Central Platte River Basin, with the most notable being a decrease in Agricultural land coverage and an increase in Vegetation and Grassland coverage. Land use changes varied across 13 focal cities across the entire basin. In particular, developed land in Grand Island, NE, nearly tripled from 2019 to 2023, making it a good possible candidate for restoration efforts. We overlaid a flood extent map with the LULC classifications in Grand Island to identify possible restoration sites under UWP. This data will inform Audubon Great Plains in identifying potential restoration sites in key cities.

Jennifer Mathis↗

DOE OSTI2022

Scale-dependent enhancement of productivity and stability in xenic Nannochloropsis cultures

Although bacterial amendments can enhance algal productivity and stability, the development of algal-bacteria consortia for commercial-scale utilization is limited. Here, for this work, we used an established high-throughput approach to generate algal-bacteria consortia, and tested consortia performance at spatial scales from microplates to 320 L raceway ponds. We used both lab and field-reared strains of Nannochloropsis oceanica to build consortia. In some experiments, we imposed environmental perturbations to test the ability of bacteria to enhance algal culture stability. In repeated assays at the scale of well plates, flasks, and bioreactors, strong effects of bacterial amendments on N. oceanica were observed. These effects were most dramatic when cultures experienced stressors such as temperature perturbations or removal of CO 2 augmentation. Isolates that were advanced for field testing included species in the genera Algoriphagus, Oceanicaulis, and Marinobacter. When consortia were generated in the field, positive effects of bacterial amendments were not observed. The amended bacteria were outcompeted, and bacterial community composition across treatments converged after the first grow out. These results highlight the complexity of using consortia in open systems, where interactions between the existing bacterial community, inoculated bacteria, and changing environmental conditions are layered upon other differences in scale and cultivation regimes. Moreover, functionally redundant bacteria are likely present in the field. Following this work, we hypothesize that tight interactions (e.g., obligate relationships between partners) will scale more predictably to outdoor systems. We suggest relying on true synthetic ecological approaches in which the relationships between bacteria and algae partners are well understood, or synthetic ecological approaches coupled with high throughput approaches to design and test consortia. We also recommend future work to examine the effect of algae-bacteria inoculation ratios on productivity and stability, track dynamics of partners through time, and manage ponds to retain beneficial symbioses.

59 BASIC BIOLOGICAL SCIENCES↗

NASA NTRSDate not supplied

The NASA Disasters Response Coordination System’s (DRCS) Response to the 2024 Hurricane Season

The National Aeronautics and Space Administration (NASA) Disasters Response Coordination System (DRCS) leverages the best available science and expertise to aid federal, state, local, and non-governmental organization (NGO) partners in addressing identified needs during a disaster response. During the 2024 hurricane season, the DRCS activated for seven hurricanes/tropical storms, providing openly available geospatial data through NASA’s Disasters Mapping Portal. Hurricanes Helene and Milton were major hurricanes that impacted the southeastern United States within weeks of one another. Impacts from Helene and Milton to the region included inland flooding, record coastal storm surge, over a thousand landslides, and regional power and telecommunications outages. In response to Helene and Milton, DRCS provided actionable information and products to stakeholders, including Synthetic Aperture Radar (SAR) analysis for landslide and flood detection, Black Marble nighttime lights products for assessing power outages, and Normalized Difference Vegetation Index (NDVI) analysis for post-event vegetation change detection. NASA deployed an Uninhibited Aerial Vehicle SAR (UAVSAR) instrument to collect data on flood extent, providing crucial information on affected communities. Additionally, astronauts aboard the International Space Station (ISS) collected hand-held photography along the paths of Hurricane Helene and Milton to aid in response efforts. Here, we summarize the DRCS responses to Helene and Milton, in particular highlighting the information and products that were provided by the DRCS and how they were utilized by partners to address immediate response needs.

Earth observations↗

DOE OSTI2023

Systems Engineering of Rhodococcus opacus to Enable Production of Drop-in Fuels from Lignocellulose

Production of drop-in fuels from lignocellulose using Rhodococcus opacus PD630 (hereafter R. opacus) is a challenging goal. During the grant period we have pushed the field forward significantly in several areas of research. Towards the end goal of accelerating the adoption of R. opacus in biofuel production, during the grant period we have expanded the phenotypic characterization of R. opacus grown in single aromatic (model lignocellulosic) compounds or their mixtures, modeling the growth conditions in lignocellulosic biomass. Harnessing the power of adaptive evolution, we produced evolved R. opacus isolates with superior lignin valorization capabilities and identified differentially expressed genes and pathways after adaptation. We used next generation multi-omic techniques such as genomic, transcriptomic, and metabolomic analyses, to identify the catabolic pathways used by R. opacus to degrade aromatic compounds and funnel these degradation products into central metabolism, as well as the aromatic transport genes required for increased tolerance and utilization. Taking this information one step further, we identified endogenous transcription factors and regulatory mechanisms important for degradation of five model aromatic compounds. To accurately estimate R. opacus growth and consumption on model lignin compounds we pioneered the use of novel extraction procedures prior to GC-MS analysis. Alongside 13 C-metabolic flux analysis, we have elucidated the metabolic routes preferred by Rhodococcus opacus during aromatic compound degradation. Finally, we used in tandem lipidomics and high-resolution mass spectrometry to identify the modulation of mycolic acids and phospholipid membrane composition modification as a strategy for aromatic tolerance in R. opacus. Being a non-model organism, R. opacus lacks the breadth of tools and technical foundation which drive biofuel research in more well-understood microbes such as Escherichia coli. To reduce this burden for use, we designed and produced new tools for genomic manipulation and engineering in R. opacus. These engineering breakthroughs support efficient genomic editing, enabling gene overexpression, repression, and genetic alteration. Using these tools, we have generated synthetically engineered strains with increased lipogenesis and growth, both positive traits required for increased lignin valorization. Optimizing engineered strains for biofuel production from lignocellulose requires extremely sophisticated synthetic rewiring of metabolism. To facilitate systems-level reorganization of metabolism in R. opacus, we created a genome-scale model that accurately predicts metabolic flux and growth rates on the aromatic compound phenol. Lignin requires extensive pre-treatment before biological degradation by R. opacus. Towards an eventual goal of degrading real-world lignin, we developed new depolymerization processes to generate lignin breakdown products (LBP). We optimized LBP storage and composition analysis techniques, enabling accurate prediction of specific LBP compound integration into cell wall components. Overall, through the work funded by this grant we generated 20 manuscripts (17 published, 3 in review/preparation), methods for increased accuracy in metabolomics of aromatic compounds, multiple genetic tools for altering the R. opacus genome, genome scale models for predicting flux through metabolic pathways, as well as multi-omic data for community use. The work funded by this grant has increased the knowledge of aromatic degradation in bacteria and advanced our efforts to optimize R. opacus for lignin valorization.

09 BIOMASS FUELS↗

DOE OSTI2025

STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies

The interdisciplinary nature of microbiome research, coupled with the generation of complex multi-omics data, makes knowledge sharing challenging. The Strengthening the Organization and Reporting of Microbiome Studies (STORMS) guidelines provide a checklist for the reporting of study information, experimental design and analytical methods within a scientific manuscript on human microbiome research. Here, in this Consensus Statement, we present the standards for technical reporting in environmental and host-associated microbiome studies (STREAMS) guidelines. The guidelines expand on STORMS and include 67 items to support the reporting and review of environmental (for example, terrestrial, aquatic, atmospheric and engineered), synthetic and non-human host-associated microbiome studies in a standardized and machine-actionable manner. Based on input from 248 researchers spanning 28 countries, we provide detailed guidance, including comparisons with STORMS, and case studies that demonstrate the usage of the STREAMS guidelines. In conclusion, STREAMS, like STORMS, will be a living community resource updated by the Consortium with consensus-building input of the broader community.

59 BASIC BIOLOGICAL SCIENCES↗

NASA NTRS2017

Revision to Global Persistent SAR Sampling with the NASA-ISRO SAR (NISAR) Mission

Abstract—The National Aeronautics and Space Administration (NASA) in the United States and the Indian Space Research Organisation (ISRO) are developing an Earth-orbiting science and applications mission that will exploit synthetic aperture radar to map Earth’s surface every 12 days, persistently on ascending and descending portions of the orbit, over all land and ice-covered surfaces. The mission’s primary objectives will be to study Earth land and ice deformation, and ecosystems, in areas of common interest to the US and Indian science communities. This single spacecraft solution with an L-band (24 cm wavelength) and S-band (10 cm wavelength) radar has a swath of over 240 km at fine resolution, using full polarimetry where needed, uses a reflector-feed system whereby the feed aperture elements are individually sampled to allow a scan-on-receive (“SweepSAR”) capability at both L-band and S-band. This design is in contrast to recent concepts towards large constellations of smaller radar satellites, and is driven by the science requirements for complete coverage over the 12-day repeat cycle, using repeat pass interferometry and polarimetry to measure deformation and surface properties. A single spacecraft with enough aperture, power, duty cycle, and downlink capacity was determined to be a more practical and implementable solution that multiple smaller spacecraft. The use of a single large aperture reflector for both the L- and Sband radars enables both to have comparable performance, leading to overall development and operational efficiencies.

Bhan, Rakesh↗

NASA NTRS2021

NASA-ISRO SAR (NISAR) Mission Status

The National Aeronautics and Space Administration (NASA) in the United States and the Indian Space Research Organisation (ISRO) are developing the NASA-ISRO Synthetic Aperture Radar (NISAR) mission, now planned for launch toward the end of 2022. The mission will exploit synthetic aperture radar to map Earth’s surface every 12 days, persistently on ascending and descending portions of the orbit, over all land and ice-covered surfaces. The mission’s primary objectives will be to study Earth land and ice deformation, and ecosystems, in areas of common interest to the US and Indian science communities. This single observatory solution with an L-band (24 cm wavelength) and S-band (10 cm wavelength) radar has a swath of over 240 km at fine resolution, using full polarimetry where needed. To achieve these unprecedented capabilities, both radars use a reflector-feed system, whereby the feed aperture elements are individually sampled to allow a scan-on-receive (“SweepSAR”) capability at both L-band and S-band. The L-band and S-band electronics and feed apertures, provided by NASA and ISRO respectively, share a common 12-m diameter deployable reflector/boom system, provided by NASA. These two radars, which can operate simultaneously, even with FPGA-based on-board digital beamforming and filtering to reduce data rates, produce prodigious amounts of data. Given the high data rates and ambitious coverage requirements, new technologies for high-rate Ka-band downlink complement these first-of-a-kind radar systems.

Kumar, Raj↗

NASA NTRS2021

Science Status of the NASA-ISRO SAR Mission

The NASA-ISRO SAR (NISAR) Mission is entering its second phase of integration and test, preparing for a launch in January 2023. The mission will exploit synthetic aperture radar to map Earth’s surface every 12 days, persistently on ascending and descending portions of the orbit, over all land and ice-covered surfaces. The mission’s primary objectives will be to study Earth land and ice deformation, and ecosystems, in areas of common interest to the US and Indian science communities. This single observatory solution with an L-band (24 cm wavelength) and S-band (10 cm wavelength) radar has a swath of over 240 km at fine resolution, and will operate primarily in a dual-polarimetric mode in an exact repeat orbit. The science teams at NASA and ISRO are working jointly to finalize the joint science plan, calibration and validation plan, and science products, and operational procedures.

Kumar, Raj↗

DOE OSTI2024

Community detection in hypergraphs via mutual information maximization

Abstract The hypergraph community detection problem seeks to identify groups of related vertices in hypergraph data. We propose an information-theoretic hypergraph community detection algorithm which compresses the observed data in terms of community labels and community-edge intersections. This algorithm can also be viewed as maximum-likelihood inference in a degree-corrected microcanonical stochastic blockmodel. We perform the compression/inference step via simulated annealing. Unlike several recent algorithms based on canonical models, our microcanonical algorithm does not require inference of statistical parameters such as vertex degrees or pairwise group connection rates. Through synthetic experiments, we find that our algorithm succeeds down to recently-conjectured thresholds for sparse random hypergraphs. We also find competitive performance in cluster recovery tasks on several hypergraph data sets.

97 MATHEMATICS AND COMPUTING↗

NASA NTRS2014

Flood Extent Mapping for Namibia Using Change Detection and Thresholding with SAR

A new method for flood detection change detection and thresholding (CDAT) was used with synthetic aperture radar (SAR) imagery to delineate the extent of flooding for the Chobe floodplain in the Caprivi region of Namibia. This region experiences annual seasonal flooding and has seen a recent renewal of severe flooding after a long dry period in the 1990s. Flooding in this area has caused loss of life and livelihoods for the surrounding communities and has caught the attention of disaster relief agencies. There is a need for flood extent mapping techniques that can be used to process images quickly, providing near real-time flooding information to relief agencies. ENVISAT/ASAR and Radarsat-2 images were acquired for several flooding seasons from February 2008 to March 2013. The CDAT method was used to determine flooding from these images and includes the use of image subtraction, decision based classification with threshold values, and segmentation of SAR images. The total extent of flooding determined for 2009, 2011 and 2012 was about 542 km2, 720 km2, and 673 km2 respectively. Pixels determined to be flooded in vegetation were typically <0.5 % of the entire scene, with the exception of 2009 where the detection of flooding in vegetation was much greater (almost one third of the total flooded area). The time to maximum flooding for the 2013 flood season was determined to be about 27 days. Landsat water classification was used to compare the results from the new CDAT with SAR method; the results show good spatial agreement with Landsat scenes.

Flood↗

NASA NTRS2021

Maya Forest Water Resources I: Using NASA Earth Observations to Map Forested Inundation in the Maya Forest

As climate change increases the severity and frequency of extreme weather events in the tropics, it is vital for the safety of local communities and the health of ecosystems to monitor seasonal inundation. Forested inundation affects the ability of forested wetlands to provide ecosystem services, such as flood mitigation, water filtration, carbon storage, and erosion mitigation. While ground-based monitoring has traditionally been used to map inundation extent, those methods are costly and time-intensive. The NASA DEVELOP team focused on seasonal inundation throughout 2008 in the Maya Forest, when changes in inundation were drastic. To monitor seasonal inundation, our team used in situ field data and Earth observations from Landsat 7 Enhanced Thematic Mapper (ETM+), Advanced Land Observing Satellite (ALOS) Phased Array type L-band Synthetic Aperture Radar (PALSAR) 1, Shuttle Radar Topography Mission (SRTM), and products from the Ice, Cloud, and Land Elevation Satellite (ICESat). The team applied a Random Forest algorithm to Landsat 7 imagery, generating an object-level land cover classification with an overall accuracy of 72.1% and forest class with 100% recall and 78% precision. The team applied L-band backscatter thresholds from existing literature to forest-masked ALOS imagery and refined the thresholds in an iterative process using field data and hydrology models to delineate seasonal inundation extent. These publicly available data products help end users from Belize’s Land Information Center (LIC) and Forest Department, Guatemala’s Center for Monitoring and Evaluation (CEMEC), and Mexico’s El Colegio de la Frontera Sur (ECOSUR) to inform land management and protect community infrastructure.

Madelyn Savan↗

DOE OSTI2023

Mechanistic Studies to Enable Aerobic Oxidation of C-H Bonds by Manganese Catalysts (Final Report)

The project Mechanistic Studies to Enable Aerobic Oxidation of C-H Bonds by Manganese Catalysts provided fundamental new insight into the factors affecting hydrocarbon oxidation reactions by manganese-oxo complexes. These insights stem from the development of a structure-function relationship, whereby particular molecular properties of manganese(IV)-oxo complexes were shown to correlate to their efficacy in hydrocarbon oxidation reactions. This work is important, as manganese oxidation catalysts have seen increasing use in synthetic transformations, including reactions relevant to the synthesis of pharmaceuticals and other value-added chemicals. The desirability of developing new manganese catalysts stems from the inexpensive nature and low toxicity of the metal manganese, which contrasts with the high cost and toxicity of many other metals. The work carried out by this project was disseminated to the scientific community in the form of 14 peer-reviewed publications and over twenty presentations. In addition, the research results were incorporated into graduate and undergraduate courses at the University of Kansas, providing additional means of dissemination.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2023

MFA-DVR: direct volume rendering of MFA models

3D volume rendering is widely used to reveal insightful intrinsic patterns of volumetric datasets across many domains. However, the complex structures and varying scales of volumetric data can make efficiently generating high-quality volume rendering results a challenging task. Multivariate functional approximation (MFA) is a new data model that addresses some of the critical challenges: high-order evaluation of both value and derivative anywhere in the spatial domain, compact representation for large-scale volumetric data, and uniform representation of both structured and unstructured data. Here, in this paper, we present MFA-DVR, the first direct volume rendering pipeline utilizing the MFA model, for both structured and unstructured volumetric datasets. We demonstrate improved rendering quality using MFA-DVR on both synthetic and real datasets through a comparative study. We show that MFA-DVR not only generates more faithful volume rendering than using local filters but also performs faster on high-order interpolations on structured and unstructured datasets. MFA-DVR is implemented in the existing volume rendering pipeline of the Visualization Toolkit (VTK) to be accessible by the scientific visualization community.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2022

TIA: A forward model and analyzer for Talbot interferometry experiments of dense plasmas

Interferometry is one of the most sensitive and successful diagnostic methods for plasmas. However, owing to the design of most common interferometric systems, the wavelengths of operation and, therefore, the range of densities and temperatures that can be probed are severely limited. Talbot–Lau interferometry offers the possibility of extending interferometry measurements to x-ray wavelengths by means of the Talbot effect. While there have been several proof-of-concept experiments showing the efficacy of this method, it is only recently that experiments to probe High Energy Density (HED) plasmas using Talbot–Lau interferometry are starting to take place. To improve these experimental designs, we present here the Talbot-Interferometry Analyzer (TIA) tool, a forward model for generating and postprocessing synthetic x-ray interferometry images from a Talbot–Lau interferometer. Although TIA can work with any two-dimensional hydrodynamic code to study plasma conditions as close to reality as possible, this software has been designed to work by default with output files from the hydrodynamic code FLASH, making the tool user-friendly and accessible to the general plasma physics community. Here, the model has been built into a standalone app, which can be installed by anyone with access to the MATLAB runtime installer and is available upon request to the authors.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

NASA NTRS2002

High Resolution X-ray Imaging

Cash, Webster↗

NASA NTRS2002

High Resolution X-ray Imaging

NAG5-5020 covered a period of 7.5 years during which a great deal of progress was made in x-ray optical techniques under this grant. We survived peer review numerous times during the effort to keep the grant going. In 1994, when the grant started we were actively pursuing the application of spherical mirrors to improving x-ray telescopes. We had found that x-ray detectors were becoming rapidly more sophisticated and affordable, but that x-ray telescopes were only being improved through the intense application of money within the AXAF program. Clearly new techniques for the future were needed. We were successful in developing and testing at the HELSTF facility in New Mexico a four reflection coma-corrected telescope made from spheres. We were able to demonstrate 0.3 arcsecond resolution, almost to the diffraction limit of the system. The community as a whole was, at that time, not particularly interested in looking past AXAF (Chandra) and the effort needed to evolve. Since we had reached the diffraction limit using non-Wolter optics we then decided to see if we could build an x-ray interferometer in the laboratory. In the lab the potential for improved resolution was substantial. If synthetic aperture telescopes could be built in space, then orders of magnitude improvement would become feasible. In 1998 NASA, under the direction of Dr Nick White of Goddard, started a study to assess the potential and feasibility of x-ray interferometry in space. My work became of central interest to the committee because it indicated that such was possible. In early 1999 we had the breakthrough that allowed us build a practical interferometer. By using flats and hooking up with the Marshall Space Flight Center facilities we were able to demonstrate fringes at 1.25keV on a one millimeter baseline. This actual laboratory demonstration provided the solid proof of concept that NASA needed. As the year progressed the future of x-ray astronomy jelled around the Maxim program. Maxim is a set of two major x-ray astronomy missions based on the concepts I developed and demonstrated under this SR&T grant. The first Maxim is to image the sky at 100 micro-arcsecond resolution. That is one thousand times higher resolution than Hubble. The full Maxim has the ultimate goal of imaging the event horizon of a black hole in an active galactic nucleus (ALAN). This will require 0.1 micro-arcsecond resolution - one million times higher than Hubble! Nonetheless, using the techniques developed under this grant, it has become possible. Maxim Pathfinder is now in the NASA planning for a new start in approximately 20 10. The full Maxim is carried as a vision mission for the post 2015 timeframe. Finally, this grant is the evolved version of the SR&T grant we carried during the 1980s and up to 1994. At that point in time this grant was also working on x-ray optics, but concentrating on x-ray spectroscopy. The techniques developed by 1990 were not chosen for use on Chandra or XMM-Newton because they were too new. During the last year, however, the Constellation-X mission recognized the need for better spectroscopy techniques and tapped our expertise. We were able to support the initial work on Con-X through this program. It now appears that the off-plane mount will be used in Con-X, increasing performance and decreasing cost and risk.

Cash, Webster↗

NASA NTRS2016

PLANT: Polarimetric-Interferometric Lab and Analysis Tools for Ecosystem and Land-Cover Science and Applications

PLANT (Polarimetric-interferometric Lab and Analysis Tools) is a new collection of software tools developed at the Jet Propulsion Laboratory to support processing and analysis of Synthetic Aperture Radar (SAR) data for ecosystem and land-cover/land-use change science and applications. PLANT inherits code components from the Interferometric Scientific Computing Environment (ISCE) to generate highresolution, coregistered polarimetric-interferometric SLC stacks from Level-0/1 data for a variety of airborne and spaceborne sensors. The goal is to provide the ecosystem and land-cover/land-use change communities with rigorous and efficient tools to perform multi-temporal, polarimetric and tomographic analyses in order to generate calibrated, geocoded and mosaicked Level-2 and Level-3 products (e.g.,maps of above-ground biomass and forest disturbance). In this paper we introduce the capabilities of PLANT and report first results obtained with the tools developed up to date.

Lavalle, Marco↗