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All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Root responses to elevated CO 2 , warming and irrigation in a semi-arid grassland: Integrating biomass, length and life span in a 5-year field experiment

Plant roots mediate the impacts of environmental change on ecosystems, yet knowledge of root responses to environmental change is limited because few experiments evaluate multiple environmental factors and their interactions. Inferences about root functions are also limited because root length dynamics are rarely measured. Using a 5-year experiment in a mixed-grass prairie, we report the responses of root biomass, length and life span to elevated carbon dioxide (CO 2 ), warming, elevated CO 2 and warming combined, and irrigation. Root biomass was quantified using soil cores and root length dynamics were assessed using minirhizotrons. By comparing root dynamics with published results for soil resources and above-ground productivity, we provide mechanistic insights into how climate change might impact grassland ecosystems. In the upper soil layer, 0–15 cm depth, both irrigation and elevated CO 2 alone increased total root length by twofold, but irrigation decreased root biomass and elevated CO 2 had only small positive effects on root biomass. The large positive effects of irrigation and elevated CO 2 alone on total root length were due to increases in both root length production and root life span. The increased total root length and life span under irrigation and elevated CO 2 coincided with apparent shifts from water limitation of plant growth to nitrogen limitation. Warming alone had minimal effects on root biomass, length and life span in this shallow soil layer. Warming and elevated CO 2 combined increased root biomass and total root length by c. 25%, but total root length in this treatment was lower than expected if the effects of CO 2 and warming alone were additive. Treatment effects on total root length and root life span varied with soil depth and root diameter. Synthesis. Sub-additive effects of CO 2 and warming suggest studies of elevated CO 2 alone might overestimate the future capacity of grassland root systems to acquire resources. In this mixed-grass prairie, elevated CO 2 with warming stimulated total root length and root life span in deeper soils, likely enhancing plant access to more stable pools of growth-limiting resources, including water and phosphorus. Therefore, these root responses help explain previous observations of higher, and more stable, above-ground productivity in these projected climate conditions.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Increased microbial growth, biomass, and turnover drive soil organic carbon accumulation at higher plant diversity

Species-rich plant communities have been shown to be more productive and to ­exhibit increased long-term soil organic carbon (SOC) storage. Soil microorganisms are central to the conversion of plant organic matter into SOC, yet the relationship between plant diversity, soil microbial growth, turnover as well as carbon use efficiency (CUE) and SOC accumulation is unknown. As heterotrophic soil microbes are primarily carbon limited, it is important to understand how they respond to increased plant-derived carbon inputs at higher plant species richness (PSR). We used the long-term grassland biodiversity experiment in Jena, Germany, to examine how microbial physiology responds to changes in plant diversity and how this affects SOC content. The Jena Experiment considers different numbers of species (1–60), functional groups (1–4) as well as functional identity (small herbs, tall herbs, grasses, and legumes). We found that PSR accelerated microbial growth and turnover and increased microbial biomass and necromass. PSR also accelerated microbial respiration, but this effect was less strong than for microbial growth. In contrast, PSR did not affect microbial CUE or biomass-specific respiration. Structural equation models revealed that PSR had direct positive effects on root biomass, and thereby on microbial growth and microbial biomass carbon. Finally, PSR increased SOC content via its positive influence on microbial biomass carbon. We suggest that PSR favors faster rates of microbial growth and turnover, likely due to greater plant productivity, resulting in higher amounts of microbial biomass and necromass that translate into the observed increase in SOC. We thus identify the microbial mechanism linking species-rich plant communities to a carbon cycle process of importance to Earth's climate system.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Advanced one-pot deconstruction and valorization of lignocellulosic biomass into triacetic acid lactone using Rhodosporidium toruloides

Abstract Background Rhodosporidium toruloides is capable of co-utilization of complex carbon sources and robust growth from lignocellulosic hydrolysates. This oleaginous yeast is therefore an attractive host for heterologous production of valuable bioproducts at high titers from low-cost, deconstructed biomass in an economically and environmentally sustainable manner. Here we demonstrate this by engineering R. toruloides to produce the polyketide triacetic acid lactone (TAL) directly from unfiltered hydrolysate deconstructed from biomass with minimal unit process operations. Results Introduction of the 2-pyrone synthase gene into R. toruloides enabled the organism to produce 2.4 g/L TAL from simple media or 2.0 g/L from hydrolysate produced from sorghum biomass. Both of these titers are on par with titers from other better-studied microbial hosts after they had been heavily engineered. We next demonstrate that filtered hydrolysates produced from ensiled sorghum are superior to those derived from dried sorghum for TAL production, likely due to the substantial organic acids produced during ensiling. We also demonstrate that the organic acids found in ensiled biomass can be used for direct synthesis of ionic liquids within the biomass pretreatment process, enabling consolidation of unit operations of in-situ ionic liquid synthesis, pretreatment, saccharification, and fermentation into a one-pot, separations-free process. Finally, we demonstrate this consolidation in a 2 L bioreactor using unfiltered hydrolysate, producing 3.9 g/L TAL. Conclusion Many steps involved in deconstructing biomass into fermentable substrate can be combined into a distinct operation, and directly fed to cultures of engineered R. toruloides cultures for subsequent valorization into gram per liter titers of TAL in a cost-effective manner.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2026

Higher_wood_density_lowers_feedstock_cost_and_has_minimal_impact_on_biomass_conversion_to_biofuels

Poplar and other woody feedstocks have the potential to provide up to 200 million tons of biomass per year that could be converted to liquid fuels. Most forestry strategies that aim at increasing biomass productivity per hectare rely on short rotation plantations of fast-growing varieties. The improvement of wood density as a key trait itself has largely been overlooked. We evaluated natural variation in wood density across a population of genetically diversePopulus trichocarpatrees grown in a common garden. Wood density varies greatly within this population but is heritable higher wood density was not systematically associated with reduced growth, challenging assumptions of a trade-off between wood density and biomass accumulation. Furthermore, denser wood led to significant improvements throughout the supply chain, including, lowering biomass production and transportation costs. Higher density not correlate to changes in biomass composition. Density did not impact bioconversion in the two feedstock-to-fuel pipelines tested (pretreatment by ionic liquids or soaking in aqueous ammonia, and fermentation to ethanol) on a representative subset of poplars. These findings highlight wood density as a promising breeding target for accelerating the development of high-yielding, conversion-efficient bioenergy crops and as an avenue for increasing land-use efficiency and reducing biomass transportation cost. This data set contain three datasets.

CBI↗
NASA NTRS1975

Estimating vegetative biomass from LANDSAT-1 imagery for range management

Evaluation of LANDSAT-1, band 5 data for use in estimation of vegetative biomass for range management decisions was carried out for five selected range sites in the Sandhills region of Nebraska. Analysis of sets of optical density-vegetative biomass data indicated that comparisons of biomass estimation could be made within one frame but not between frames without correction factors. There was high correlation among sites within sets of radiance value-vegetative biomass data and also between sets, indicating comparisons of biomass could be made within and between frames. Landsat-1 data are shown to be a viable alternative to currently used methods of determining vegetative biomass production and stocking rate recommendations for Sandhills rangeland.

Seevers, P. M.↗
NASA NTRS1981

Biomass measurement from LANDSAT: Drought and energy applications

The theory supporting the use of vegetation indices derived from LANDSAT data for the direct measurement of biomass is reviewed. The use of multispectral data to measure biomass is a natural and viable application since the photosynthetic production of biomass gives vegetation its unique spectral properties. Vegetation indices also perform a normalization function which tends to make them insensitive to atmospheric and soil color variations. Optical and digital LANDSAT products are discussed relative to the use of vegetation indices to monitor drought impact. Based on results obtained in Colorado, operational use of LANDSAT to monitor drought is cost effective, practical and ready for implementation today. The direct measurement of biomass energy resources may also benefit from LANDSAT technology. Measurement of total biomass and annual primary production may be feasible. Identification of that component of biomass resources available for energy use will require other sources of information, however.

Maxwell, E. L.↗
NASA NTRS1985

Remote Sensing of Coastal Wetlands Biomass Using Thematic Mapper Wavebands

Spectral data, simulating thematic mapper bands 3, 4 and 5 were gathered in salt and brackish marshes using a hand-held radiometer. Simple regression models were developed equating spectral radiance indicies with total live biomass for S. alterniflora in a salt marsh and for a variety of plant species in a brackish marsh. Models were then tested and compared to harvest estimates of biomass. In the salt marsh, biomass estimates from spectral data were similar to harvest biomass estimates during most of the growing season. Estimates of annual net aerial primary productivity calculated from spectral data were within 21% of production estimated from harvest data. During August, biomass estimates from spectral data in the brackish marsh were similar to biomass estimated by harvesting techniques but not always comparable at other times in the growing season.

Hardisky, M. A.↗
NASA NTRS1989

Tropical forest biomass and successional age class relationships to a vegetation index derived from Landsat TM data

Forest stand structure and biomass data were collected using conventional forest inventory techniques in tropical, subtropical, and warm temperate forest biomes. The feasibility of detecting tropical forest successional age class and total biomass differences using Landsat-Thematic mapper (TM) data, was evaluated. The Normalized Difference Vegetation Index (NDVI) calculated from Landsat-TM data were not significantly correlated with forest regeneration age classes in the mountain terrain of the Luquillo Experimental Forest, Puerto Rico. The low sun angle and shadows cast on steep north and west facing slopes reduced spectral reflectance values recorded by TM orbital altitude. The NDVI, calculated from low altitude aircraft scanner data, was significatly correlated with forest age classes. However, analysis of variance suggested that NDVI differences were not detectable for successional forests older than approximately 15-20 years. Also, biomass differences in young successional tropical forest were not detectable using the NDVI. The vegetation index does not appear to be a good predictor of stand structure variables (e.g., height, diameter of main stem) or total biomass in uneven age, mixed broadleaf forest. Good correlation between the vegetation index and low biomass in even age pine plantations were achieved for a warm temperate study site. The implications of the study for the use of NDVI for forest structure and biomass estimation are discussed.

Sader, Steven A.↗
NASA NTRS1985

Remote sensing of wetland biomass and productivity for global biosystem research

The study of ecosystem function and the contributions of particular ecosystems to global elemental cycling will require data collection from orbital platforms. Presently used ground sampling techniques are not adequate for large area vegetation assessments. The research was directed toward an understanding of the relationship between spectral radiance and plant canopy biomass. Changes in the architecture of the canopy alters the observed spectral radiance patterns. The green components of a plant canopy interacts most strongly with incident radiation and usually reflect edaphic conditions as they relate to plant vigor. Plant biomass serves as an excellent integrator of the environmental factors encountered by the plant and can be used as an indicator for predicting soil redox, nutrient status, microbial activity, etc. The use was examined of TM spectral data to discriminate biomass classes and, in turn, to relate the biomass classes to the chemical status of the soil. Several preliminary studies have indicated that solar angle can be used to improve biomass predictions. This important observation also suggests that latitudinal extrapolation of the biomass predicting models will be possible if selected characteristics of the incident radiation are known.

Hardisky, M. A.↗
NASA NTRS1995

Spaceborne Applications of P Band Imaging Radars for Measuring Forest Biomass

In three sites of boreal and temperate forests, P band HH, HV, and VV polarization data combined estimate total aboveground dry woody biomass within 12 to 27% of the values derived from allometric equations, depending on forest complexity. Biomass estimates derived from HV-polarization data only are 2 to 14% less accurate. When the radar operates at circular polarization, the errors exceed 100% over flooded forests, wet or damaged trees and sparse open tall forests because double-bounce reflections of the radar signals yield radar signatures similar to that of tall and massive forests. Circular polarizations, which minimize the effect of Faraday rotation in spaceborne applications, are therefore of limited use for measuring forest biomass. In the tropical rain forest of Manu, in Peru, where forest biomass ranges from 4 kg/sq m in young forest succession up to 50 kg/sq m in old, undisturbed floodplain stands, the P band horizontal and vertical polarization data combined separate biomass classes in good agreement with forest inventory estimates. The worldwide need for large scale, updated, biomass estimates, achieved with a uniformly applied method, justifies a more in-depth exploration of multi-polarization long wavelength imaging radar applications for tropical forests inventories.

Rignot, Eric J.↗
NASA NTRS1998

Laboratory Studies of Carbon Emission from Biomass Burning for use in Remote Sensing

Biomass burning is a significant source of many trace gases in the atmosphere. Up to 25% of the total anthropogenic carbon dioxide added to the atmosphere annually is from biomass burning. However, this gaseous emission from fires is not directly detectable from satellite. Infrared radiance from the fires is. In order to see if infrared radiance can be used as a tracer for these emitted gases, we made laboratory measurements to determine the correlation of emitted carbon dioxide, carbon monoxide and total burned biomass with emitted infrared radiance. If the measured correlations among these quantities hold in the field, then satellite-observed infrared radiance can be used to estimate gaseous emission and total burned biomass on a global, daily basis. To this end, several types of biomass fuels were burned under controlled conditions in a large-scale combustion laboratory. Simultaneous measurements of emitted spectral infrared radiance, emitted carbon dioxide, carbon monoxide, and total mass loss were made. In addition measurements of fuel moisture content and fuel elemental abundance were made. We found that for a given fire, the quantity of carbon burned can be estimated from 11 (micro)m radiance measurements only within a factor of five. This variation arises from three sources, 1) errors in our measurements, 2) the subpixel nature of the fires, and 3) inherent differences in combustion of different fuel types. Despite this large range, these measurements can still be used for large-scale satellite estimates of biomass burned. This is because of the very large possible spread of fire sizes that will be subpixel as seen by Moderate Resolution Imaging Spectroradiometer (MODIS). Due to this large spread, even relatively low-precision correlations can still be useful for large-scale estimates of emitted carbon. Furthermore, such estimates using the MODIS 3.9 (micro)m channel should be even more accurate than our estimates based on 11 (micro)m radiance.

Wald, Andrew E.↗
NASA NTRS2000

BOREAS RSS-15 SIR-C and Landsat TM Biomass and Landcover Maps of the NSA

As part of BOREAS, the RSS-15 team conducted an investigation using SIR-C, X-SAR, and Landsat TM data for estimating total above-ground dry biomass for the SSA and NSA modeling grids and component biomass for the SSA. Relationships of backscatter to total biomass and total biomass to foliage, branch, and bole biomass were used to estimate biomass density across the landscape. The procedure involved image classification with SAR and Landsat TM data and development of simple mapping techniques using combinations of SAR channels. For the SSA, the SIR-C data used were acquired on 06-Oct-1994, and the Landsat TM data used were acquired on 02-Sep-1995. The maps of the NSA were developed from SIR-C data acquired on 13-Apr-1994. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

Hall, Forrest G.↗
NASA NTRS2003

The Study of Biomass Emissions for Defining Radiative Forcing of Climate

Accurate quantification of the amounts of trace gases and particulate matter emitted from vegetation fires and other sources of biomass burning (agricultural waste and biofuels) on a regional and global basis is required by a number of users, including scientists studying a wide range of atmospheric processes, national governments who are required to report greenhouse gas emissions, and those interested in quantifying the sources of air pollution that affect human health at regional scales. Over the past decade, improvements in the ability to detect and map fires using a number of different satellite systems have been achieved, largely through efforts coordinated through working groups organized by the IGBP Data and Information System and Global Observation of Forest Cover (GOFC) projects. In addition, significant advances and improvement in or understanding of the emissions factors for biomass burning in different biomes has resulted through efforts by the Biomass Burning Experiment (BIBEX) organized through the International Global Atmospheric Chemistry project. A number of satellite-based fire data products have been generated, and a number of new products will shortly be available. These new data products will provide the basis for estimating emissions from biomass burning on a global basis. However, a number of issues remain concerning the availability of other data sets needed to generate these estimates. Recognizing these issues, the GOFC-Fire Satellite Validation Workshop (held in Lisbon, Portugal on 9-11 July 2001), recommended that a workshop focusing on Improving Global Estimates of Atmospheric Emissions from Biomass Burning be organized. This workshop was held from 17- 19 July 2002 on the campus of the University of Maryland, College Park, Maryland. This workshop served as the annual meeting of the GOFC/GOLD-Fire Program. The overall goals of the meeting were to review the information products generated from satellite imagery and other sources that are currently available for developing emission estimates from biomass burning, evaluate areas where improved or additional products would be beneficial, and recommend products for use by the atmospheric science community.

Penner, Joyce↗
NASA NTRS2008

Model Effects on GLAS-Based Regional Estimates of Forest Biomass and Carbon

ICESat/GLAS waveform data are used to estimate biomass and carbon on a 1.27 million sq km study area. the Province of Quebec, Canada, below treeline. The same input data sets and sampling design are used in conjunction with four different predictive models to estimate total aboveground dry forest biomass and forest carbon. The four models include nonstratified and stratified versions of a multiple linear model where either biomass or (square root of) biomass serves as the dependent variable. The use of different models in Quebec introduces differences in Provincial biomass estimates of up to 0.35 Gt (range 4.942+/-0.28 Gt to 5.29+/-0.36 Gt). The results suggest that if different predictive models are used to estimate regional carbon stocks in different epochs, e.g., y2005, y2015, one might mistakenly infer an apparent aboveground carbon "change" of, in this case, 0.18 Gt, or approximately 7% of the aboveground carbon in Quebec, due solely to the use of different predictive models. These findings argue for model consistency in future, LiDAR-based carbon monitoring programs. Regional biomass estimates from the four GLAS models are compared to ground estimates derived from an extensive network of 16,814 ground plots located in southern Quebec. Stratified models proved to be more accurate and precise than either of the two nonstratified models tested.

Nelson, Ross↗
NASA NTRS2009

Recent Biomass Burning in the Tropics and Related Changes in Tropospheric Ozone

Biomass burning is an important source of chemical precursors of tropospheric ozone. In the tropics, biomass burning produces ozone enhancements over broad regions of Indonesia, Africa, and South America including Brazil. Fires are intentionally set in these regions during the dry season each year to clear cropland and to clear land for human/industrial expansion. In Indonesia enhanced burning occurs during dry El Nino conditions such as in 1997 and 2006. These burning activities cause enhancement in atmospheric particulates and trace gases which are harmful to human health. Measurements from the Aura Ozone Monitoring Instrument (OMI) and Microwave Limb Sounder (MLS) from October 2004-November 2008 are used to evaluate the effects of biomass burning on tropical tropospheric ozone. These measurements show sizeable decreases approx.15-20% in ozone in Brazil during 2008 compared to 2007 which we attribute to the reduction in biomass burning. Three broad biomass burning regions in the tropics (South America including Brazil, western Africa, and Indonesia) were analyzed in the context of OMI/MLS measurements and the Global Modeling Initiative (GMI) chemical transport model developed at Goddard Space Flight Center. The results indicate that the impact of biomass burning on ozone is significant within and near the burning regions with increases of approx.10-25% in tropospheric column ozone relative to average background concentrations. The model suggests that about half of the increases in ozone from these burning events come from altitudes below 3 km. Globally the model indicates increases of approx.4-5% in ozone, approx.7-9% in NO, (NO+NO2), and approx.30-40% in CO.

Ziemke↗
NASA NTRS2012

Purifying, Separating, and Concentrating Cells From a Sample Low in Biomass

Frequently there is an inability to process and analyze samples of low biomass due to limiting amounts of relevant biomaterial in the sample. Furthermore, molecular biological protocols geared towards increasing the density of recovered cells and biomolecules of interest, by their very nature, also concentrate unwanted inhibitory humic acids and other particulates that have an adversarial effect on downstream analysis. A novel and robust fluorescence-activated cell-sorting (FACS)-based technology has been developed for purifying (removing cells from sampling matrices), separating (based on size, density, morphology), and concentrating cells (spores, prokaryotic, eukaryotic) from a sample low in biomass. The technology capitalizes on fluorescent cell-sorting technologies to purify and concentrate bacterial cells from a low-biomass, high-volume sample. Over the past decade, cell-sorting detection systems have undergone enhancements and increased sensitivity, making bacterial cell sorting a feasible concept. Although there are many unknown limitations with regard to the applicability of this technology to environmental samples (smaller cells, few cells, mixed populations), dogmatic principles support the theoretical effectiveness of this technique upon thorough testing and proper optimization. Furthermore, the pilot study from which this report is based proved effective and demonstrated this technology capable of sorting and concentrating bacterial endospore and bacterial cells of varying size and morphology. Two commercial off-the-shelf bacterial counting kits were used to optimize a bacterial stain/dye FACS protocol. A LIVE/DEAD BacLight Viability and Counting Kit was used to distinguish between the live and dead cells. A Bacterial Counting Kit comprising SYTO BC (mixture of SYTO dyes) was employed as a broad-spectrum bacterial counting agent. Optimization using epifluorescence microscopy was performed with these two dye/stains. This refined protocol was further validated using varying ratios and mixtures of cells to ensure homogenous staining compared to that of individual cells, and were utilized for flow analyzer and FACS labeling. This technology focuses on the purification and concentration of cells from low-biomass spacecraft assembly facility samples. Currently, purification and concentration of low-biomass samples plague planetary protection downstream analyses. Having a capability to use flow cytometry to concentrate cells out of low-biomass, high-volume spacecraft/ facility sample extracts will be of extreme benefit to the fields of planetary protection and astrobiology. Successful research and development of this novel methodology will significantly increase the knowledge base for designing more effective cleaning protocols, and ultimately lead to a more empirical and true account of the microbial diversity present on spacecraft surfaces. Refined cleaning and an enhanced ability to resolve microbial diversity may decrease the overall cost of spacecraft assembly and/or provide a means to begin to assess challenging planetary protection missions.

Benardini, James N.↗
NASA NTRS2022

GEDI Launches a New Era of Biomass Inference from Space

Accurate estimation of aboveground forest biomass stocks is required to assess the impacts of land use changes such as deforestation and subsequent regrowth on concentrations of atmospheric CO 2 . The Global Ecosystem Dynamics Investigation (GEDI) is a lidar mission launched by NASA to the International Space Station in 2018. GEDI was specifically designed to retrieve vegetation structure within a novel, theoretical sampling design that explicitly quantifies biomass and its uncertainty across a variety of spatial scales. In this paper we provide the estimates of pan-tropical and temperate biomass derived from two years of GEDI observations. We present estimates of mean biomass densities at 1 km resolution, as well as estimates aggregated to the national level for every country GEDI observes, and at the sub-national level for the United States. For all estimates we provide the standard error of the mean biomass. These data serve as a baseline for current biomass stocks and their future changes, and the mission’s integrated use of formal statistical inference points the way towards the possibility of a new generation of powerful monitoring tools from space.

Ralph Dubayah↗
DOE OSTI2020

Nanoporous Catalysts for Biomass Conversion

Transforming plant biomass to biofuel and chemicals has become a global effort as results of increasing fuel demand but diminishing fossil-based energy preservation and rising concerns of climate and environmental impact. Various conversion routes involving thermochemical and biological conversions have been established and well-studied. Heterogeneous catalysis is playing a critical role in the biomass conversion and, with some unique catalytic properties, nanoporous catalysts have been extensively utilized in catalytic process of biomass conversion and exhibited exciting catalytic performance. This chapter will be devoted to nanoporous catalysts used in biomass conversion. It will start with a brief introduction of current biomass conversion technologies and then a detailed review of the application of various nanoporous materials in a large diversity of catalytic reactions in biomass conversion. The nanoporous materials include zeolites and zeotypes, metal-organic frameworks (MOFs), nanoporous carbons and carbon nitrides, nanoporous oxides, hydroxides and complex oxide forms, porous organic polymers (POPs), and porous metals.

Shi, Hui↗