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At least 253 records · Page 14

Large-scale space use of large juvenile and adult smalltooth sawfish Pristis pectinata: implications for management

The smalltooth sawfish Pristis pectinata is an endangered species endemic to the Atlantic Ocean. The only known viable populations occur in the USA along both coasts of Florida and in the western Bahamas. Little is known about habitat use and movement ecology of large juvenile and adult smalltooth sawfish. Although Critical Habitat — a management designation in the USA — has been identified for small juveniles, it has yet to be identified for these life stages. Between May 2016 and April 2019, we used passive acoustic telemetry and 3 large data sharing networks of receivers to track movements of 43 large juvenile and adult smalltooth sawfish. During this study, 24 females and 19 males were implanted with transmitters with estimated 4 or 10 yr battery lives. These tagged individuals were detected off the southeastern USA on 461 receivers ranging from off the coast of Brunswick, Georgia, to the lower Florida Keys, and along the Gulf coast to Apalachee Bay, Florida. Seasonal migrations were undertaken by 58% (43% mature; 57% immature) of the tagged individuals, with the remainder being apparent residents of their tagging locations. Tagged sawfish from both size classes and of both sexes migrated, which indicates that neither sex nor length is a predictor of whether a sawfish will migrate or not. Although both coasts of Florida were used for migration, most individuals consistently used the same coast when they migrated. The areas surrounding Boca Grande, Cape Canaveral, and the lower Florida Keys were heavily visited sites that could be further evaluated as potential Critical Habitat for these life stages. Understanding the movement patterns of this Critically Endangered species is essential for creating policies to protect areas important for promoting growth of the population.

Pristis pectinata Habitat use · Acoustic monitorin↗

The architecture of resilience: a genome assembly of Myrothamnus flabellifolia sheds light on desiccation tolerance and sex determination

Myrothamnus flabellifolia is a dioecious resurrection plant endemic to southern Africa that has become an important model for understanding desiccation tolerance. Despite its ecological and medicinal significance, genomic and transcriptomic resources for the species are limited. We generated a chromosome-level, haplotype-resolved reference genome assembly and annotation for M. flabellifolia and conducted transcriptomic profiling across a natural dehydration–rehydration time course in the field. Genome architecture and sex determination were characterized, and co-expression network and cis-regulatory element (CRE) enrichment analyses were used to investigate dynamic responses to desiccation. The 1.28-Gb genome exhibits unusually consistent chromatin architecture with unique chromosome organization across highly divergent haplotypes. We identified an XY sexual system with a small sex-determining region on Chromosome 8. Transcriptomic responses varied with dehydration severity, pointing to early suppression of growth, progressive activation of protective mechanisms, and subsequent return to homeostasis upon rehydration. Late embryogenesis abundant and early light-induced protein transcripts were dynamically regulated and showed enrichment of abscisic acid and stress-responsive CREs pointing toward conserved responses. Together, this study provides foundational resources for understanding the genomic architecture and reproductive biology of M. flabellifolia and offers new insights into the mechanisms of desiccation tolerance.

chromosome structure↗

GeoNEX-SUBSETS: Geostationary Satellite Observations Over International Observing Network Sites

Satellite remote sensing is crucial for monitoring the Earth’s surface and for simulating global carbon and water cycles. Subsets of satellite data from sensors such as MODIS over established observing networks have been valuable for researchers for comparing the ground observed phenomena with satellite observations. Here, we introduce new subsets of the GeoNEX geostationary satellite datasets over locations of several ground observation networks. The NASA Earth Exchange group has been generating geostationary satellite products with our international partners and universities to cover the entire globe. In comparison to polar-orbiting satellite sensors such as MODIS, the new generation geostationary satellites observe target areas at a higher frequency (5-10 minutes), which also significantly increased the data volume. To reduce the burden of downloading and extracting geostationary time series data and provide easy access to the community, we provide subsets of GeoNEX products through our data portal [www.data.nas.nasa.gov]. The ready-to-use subset follows the same format as the MODIS fixed sites subset tools for users who are familiar with MODIS subset data and software. The selected networks include Fluxnet, AERONET, and Phenocam over the conterminous US. We demonstrate the usage of the GeoNEX fixed-site subset data and showcase thir advantages with three example studies. The first example is simulating the diurnal cycle of plant ecophysiology at Fluxnet sites. The high frequency of the GeoNEX time series allows us to run ecological models at sub-hour time steps and directly compare the simulated carbon and water fluxes with half-hourly Fluxnet data. The second example uses the geostationary data to track phenological changes. It highlights the high-frequent observations of geostationary satellites in helping mask cloud covers and capture the quick responses of vegetation to environmental changes. As such, these examples demonstrate the value of ready-to-use GeoNEX subsets data in terrestrial ecophysiology research.

GeoNEX↗

Mobile Device Application for Monitoring Cyanobacteria Harmful Algal Blooms Using Sentinel-3 Satellite Ocean and Land Colour Instruments

Cyanobacterial harmful algal blooms (cyanoHAB) cause human and ecological health problems in lakes worldwide. The timely distribution of satellite-derived cyanoHAB data is necessary for adaptive water quality management and for targeted deployment of water quality monitoring resources. Software platforms that permit timely, useful, and cost-effective delivery of information from satellites are required to help managers respond to cyanoHABs. The Cyanobacteria Assessment Network (CyAN) mobile device application (app) uses data from the European Space Agency Copernicus Sentinel-3 satellite Ocean and Land Colour Instrument (OLCI) in near real-time to make initial water quality assessments and quickly alert managers to potential problems and emerging threats related to cyanobacteria. App functionality and satellite data were validated with 25 state health advisories issued in 2017. The CyAN app provides water quality managers with a user-friendly platform that reduces the complexities associated with accessing satellite data to allow fast, efficient, initial assessments across lakes.

Harmful Algal Bloom↗

3D-CHESS: Decentralized, Distributed, Dynamic, and Context-aware Heterogeneous Sensor Systems

This paper describes the objectives and current status of the 3D-CHESS project which aims to demonstrate a new Earth observing strategy based on a context-aware Earth observing sensor web. This sensor web consists of a set of nodes with a knowledge base, heterogeneous sensors, edge computing, and autonomous decision-making capabilities. Context awareness is defined as the ability for the nodes to gather, exchange, and leverage contextual information (e.g., state of the Earth system, state and capabilities of itself and of other nodes in the network, and how those states relate to the dy- namic mission objectives) to improve decision making and planning. The current goal of the project is to demonstrate proof of concept by comparing the performance of a 3D- CHESS sensor web with that of status quo architectures in the context of a multi-sensor inland hydrologic and ecologic monitoring system.

David, Cedric H.↗

The ecology of prominences

The paper discusses the roles of prominences in the solar scheme. Attention is given to classifications and the ways in which prominences exist: hydrostatic support, ballistic support, and magnetic support. In the case of ballistic support, surges are differentiated from sprays which involve the ejection of material that is already above the solar surface. Discussion also covers filimets and fibrils and the conditions for their appearance. It is proposed that most flares originate in prominence instabilities. In addition supergranulation is covered, noting the network is not seen on the boundary of unipolar regions. It is concluded that prominences play a critical role in flares and field reconnection, and the evolution of solar magnetic fields.

Zirin, H.↗

Solutions Network Formulation Report. The Potential Contributions of the Global Precipitation Measurement Mission to Phosphorus Reduction Efforts in the Florida Everglades

This candidate solution suggests the use of GPM precipitation observations to enhance the CERP. Specifically, GPM measurements could augment in situ precipitation data that are used to model agricultural phosphorus discharged into the Everglades. This solution benefits society by aiding water resource managers in identifying effective phosphorus reduction scenarios and thereby returning the Everglades to a more natural state. This solution supports the Water Management, Coastal Management, and Ecological Forecasting National Applications.

Anderson, Daniel↗

Sea Ice Outlook for September 2015 June Report - NASA Global Modeling and Assimilation Office

The recent decline in perennial sea ice cover in Arctic Ocean is a topic of enormous scientific interest and has relevance to a broad variety of scientific disciplines and human endeavors including biological and physical oceanography, atmospheric circulation, high latitude ecology, the sustainability of indigenous communities, commerce, and resource exploration. A credible seasonal prediction of sea ice extent would be of substantial use to many of the stakeholders in these fields and may also reveal details on the physical processes that result in the current trends in the ice cover. Forecasts are challenging due in part to limitations in the polar observing network, the large variability in the climate system, and an incomplete knowledge of the significant processes. Nevertheless it is a useful to understand the current capabilities of high latitude seasonal forecasting and identify areas where such forecasts may be improved. Since 2008 the Arctic Research Consortium of the United States (ARCUS) has conducted a seasonal forecasting contest in which the average Arctic sea ice extent for the month of September (the month of the annual extent minimum) is predicted from available forecasts in early June, July, and August. The competition is known as the Sea Ice Outlook (SIO) but recently came under the auspices of the Sea Ice Prediction Network (SIPN), and multi-agency funded project to evaluate the SIO. The forecasts are submitted based on modeling, statistical, and heuristic methods. Forecasts of Arctic sea ice extent from the GMAO are derived from seasonal prediction system of the NASA Goddard Earth Observing System model, version 5 (GEOS 5) coupled atmosphere and ocean general circulation model (AOGCM). The projections are made in order to understand the relative skill of the forecasting system and to determine the effects of future improvements to the system. This years prediction is for a September average Arctic ice extent of 5.030.41 million km2.

SIPN↗

Very High Resolution Tree Cover Mapping for Continental United States using Deep Convolutional Neural Networks

Uncertainties in input land cover estimates contribute to a significant bias in modeled above ground biomass (AGB) and carbon estimates from satellite-derived data. The resolution of most currently used passive remote sensing products is not sufficient to capture tree canopy cover of less than ca. 10-20 percent, limiting their utility to estimate canopy cover and AGB for trees outside of forest land. In our study, we created a first of its kind Continental United States (CONUS) tree cover map at a spatial resolution of 1-m for the 2010-2012 epoch using the USDA NAIP imagery to address the present uncertainties in AGB estimates. The process involves different tasks including data acquisition ingestion to pre-processing and running a state-of-art encoder-decoder based deep convolutional neural network (CNN) algorithm for automatically generating a tree non-tree map for almost a quarter million scenes. The entire processing chain including generation of the largest open source existing aerial satellite image training database was performed at the NEX supercomputing and storage facility. We believe the resulting forest cover product will substantially contribute to filling the gaps in ongoing carbon and ecological monitoring research and help quantifying the errors and uncertainties in derived products.

High Resolution↗

Solutions Network Formulation Report. The Potential Contributions of the Global Precipitation Measurement Mission to Estuary Management in Acadia National Park

This candidate solution suggests the use of GPM precipitation observations to enhance the Acadia National Park NLERDSS. Simulated GPM data should provide measurements that would enable analysis of how precipitation affects runoff and nutrient load in the park?s wetlands. This solution benefits society by aiding park and resource managers in making predictions based on hypothetical changes and in identifying effective mitigation scenarios. This solution supports the Coastal Management, Water Management, and Ecological Forecasting National Applications.

Anderson, Daniel↗

Acquisition and production of skilled behavior in dynamic decision-making tasks

Detailed summaries of two NASA-funded research projects are provided. The first project was an ecological task analysis of the Star Cruiser model. Star Cruiser is a psychological model designed to test a subject's level of cognitive activity. Ecological task analysis is used as a framework to predict the types of cognitive activity required to achieve productive behavior and to suggest how interfaces can be manipulated to alleviate certain types of cognitive demands. The second project is presented in the form of a thesis for the Masters Degree. The thesis discusses the modeling of decision-making through the use of neural network and genetic-algorithm machine learning technologies.

Kirlik, Alex↗

Solutions Network Formulation Report. The Potential Contribution of the Ocean Surface Topography Mission to the General NOAA Oil Monitoring Environment

Data collected by the OSTM could be used to provide a solution for the GNOME DST. GNOME, developed by NOAA?s Office of Response and Restoration Hazardous Materials Response Division, geospatially models oil spill trajectories using wind, current, river flow, and tidal data. Data collected by the OSTM would supply information about ocean currents and wind speeds. This Candidate Solution is in alignment with the Coastal Management, Water Management, Disaster Management, Public Health, Ecological Forecasting, and Homeland Security National Applications and will benefit society by improving the capabilities of emergency responders who evaluate an oil spill?s probable threat.

Hilbert, Kent↗

Three‐trophic level food webs support the safety of a biocontrol agent 3 years after release

Biological control (biocontrol) is a powerful tool for managing invasive alien species and assisting the restoration of native ecosystems. Rigorous post‐release monitoring of biocontrol agents is critical to evaluate the success of biocontrol programs; however, this is still rarely implemented. Here, we combined the use of species interaction networks with a Before‐After Control‐Impact design to evaluate the target and non‐target, direct and indirect effects of the Australian gall wasp Trichilogaster acaciaelongifoliae , released to control the invasive plant Acacia longifolia in Portugal. We compared the structure of plant‐galling insect‐parasitoid food webs before and 3 years after the release of the biocontrol agent. Exhaustive sampling did not detect any non‐target effects, either direct (on non‐target plants) or indirect (on other galling insects via shared plants). Additionally, no significant changes were detected in network structure that could be related to the establishment of the biocontrol agent. This study shows that monitoring biocontrol at the community level is possible and that, when carefully planned, biocontrol poses minimal risk of non‐target effects.

López‐Núñez, Francisco A. [Centre for Functional E↗

Midwest Food Security & Agriculture II: Leveraging NASA Earth Observations to Analyze and Display Crop Phenology Data and Weather Conditions to Support Expansion of Small Grain Crops in the Midwest

Agriculture in the Midwest is dominated by monoculture systems that strip the soil of nutrients, decrease yields, and worsen water quality. Crop diversification and cultivating small grains is economically and ecologically advantageous, but limited in practice due to a lack of data about small-grain crop performance as well as monoculture-favoring insurance coverage, economic incentives, and sociocultural traditions. Practical Farmers of Iowa (PFI) strives to create more sustainable agriculture and supports Midwestern farmers in adding small grains into their crop rotations. The DEVELOP team partnered with the USDA Agricultural Research Service and the USA National Phenology Network to assist PFI in applying NASA Earth observation data to track small-grain crop performance. This project developed a Google Earth Engine user interface that enables PFI farmers to compare satellite-assessed vegetation production and climatic conditions of their farm with other PFI farmers. The team assessed the crop performance through Normalized Difference Vegetation Index (NDVI) values derived from Landsat 7 Enhanced Thematic Mapper Plus (ETM+) and Landsat 8 Operational Land Imager (OLI). Additionally, the team created a regression model to analyze the predictive properties of vegetation indices and crop yield, ultimately establishing a relationship with mean NDVI from the early growing season. PFI farmers can utilize these products to make informed decisions about their crop production as well as advocate for more expansive insurance policies to protect small-grain crops.

Sophie Barrowman↗

Controlling matric potential in microfluidics to examine microbial dynamics in unsaturated porous media

The use of microfluidics for the study of soil microbial ecology is an emerging field. Most microfluidic studies of biological systems, however, have been performed under fully saturated conditions that are not representative of natural soil. Therefore, while microfluidics offer many unique capabilities that other methodologies cannot, they are not currently suited to address the effects of matric potential, an important variable defining the microbial moisture niche. Here, a methodology is presented that allows the user to control the aqueous conditions within microfluidic networks by manipulating matric potential using a hanging water column. The method relies on hydrophilic surface treatment of the microfluidic device using polyvinyl alcohol (PVA) and incorporating a bed of small pores at the network boundaries, which serve as a porous ceramic plate analogue (PPA). The method was validated on a simple capillary bundle and then on a more complex pore network. A water retention curve, exhibiting hysteresis, was generated for the pore network over a narrow matric potential range of 0 to – 5 kPa. Both the drainage and wetting curves were reproducible, as were the spatial configuration and the number of fragmented moisture niches in the pore network, particularly on the drainage curve. In contrast, the wetting curve exhibited greater variability in spatial configuration due to the “ink bottle effect,” where capillarity was interrupted by wider pore bodies. Ultimately, the methodology provides realistic pore-scale moisture conditions that can be easily manipulated and maintained, enabling new opportunities to explore soil biophysics and microbial biogeography in unsaturated porous media. As a brief example, images showing the localization of fluorescently tagged Pantoea sp. YR343 at −4.3 kPa are presented, highlighting bacterial distributions in water films and air-water interfaces.

59 BASIC BIOLOGICAL SCIENCES↗

Automated Framework for Groundwater Monitoring Using DWT with LSTM and Transformers

Environmental monitoring is critical for safeguarding public health and ecological well-being. Traditional data structuring and workflow monitoring methods consume significant time and effort, hindering timely insights and effective decision-making. Our study addresses this challenge by presenting an AI framework that automates data cleaning, structuring, and modeling processes, specifically targeting applications in groundwater monitoring. By leveraging automation for data processing and model training, our framework establishes a novel and efficient paradigm for environmental monitoring, with its potential application to the vast network of over a hundred Department of Energy Environmental Management (DoE-EM) cleanup sites across the country. It analyzes data streams from a network of groundwater Internet-of-Things (IoT) sensors deployed at the Savannah River Site (SRS) for prediction modeling. This allows human experts to focus on analysis and decision-making, ultimately leading to better environmental outcomes.The framework employs multivariate time-series forecasting methods to study and model the behavior of varying chemical analytes. The continuous learning process is enabled by utilizing deep learning techniques. It allows the framework to become more nuanced in its analysis over time, adapting to the specific characteristics of the environmental site and the evolving nature of contaminant behavior. Deep learning models known for sequence modeling, LSTM, and Transformers are employed for time series forecasting. Data processing and structuring are essential components significantly impacting the final model's performance. This hypothesis was proven by presenting a comparative analysis of model performance with processed and unprocessed data. The feature engineering approach utilized was the Discrete Wavelet Transform, which works well with time series data.

Discrete Wavelet Transform (DWT)↗

March 2011 Physical Indicators Workshop Summary Report

The National Climate Assessment (NCA) convened a workshop on Physical Climate Indicators from 29-30 March 2011, as part of a series on Monitoring Climate Change and its Impacts . The overarching goal of this workshop was to identify a few broad categories of potential physical climate indicators using a set of priorities developed by the NCA, and to provide a clear justification for how they would inform the Nation about climate change. Additional goals included providing input on the overall NCA framework for selecting the indicators and suggesting methodologies to construct indicators. Although one of the workshop goals was to address the status of current observational networks to support indicators, this was not a main focus of any single discussion. However, participants agreed with the NCA indicator vision that high quality data were needed to develop indicators, and generally focused on identifying indicator categories that current observation systems could support. The nearly 60 participants, primarily from Federal agencies, received a white paper in advance of the workshop that detailed the NCA vision for a coordinated suite of climate-related physical, ecological, and societal indicators. The intent of these national indicators of change is to develop a way to evaluate and communicate over time both the rate of change in impacts and the capacity to respond to climate drivers. These indicators will be tracked as a part of ongoing, long-term assessment activities, with adjustments as necessary to adapt to changing conditions and understanding. An initial framework was provided to workshop participants to ensure that everyone understood the audience, scope, and purpose of the indicators. A common lexicon was defined since indicator terminology varies widely. In addition, several potential approaches to grouping or categorizing the indicators were presented. Participants spent most of their time in small breakout groups with facilitators, working to address a common set of questions. The workshop was structured to start with the broadest issue and then focus down as the workshop progressed. The first breakout therefore solicited comments on the NCA indicator framework, followed by discussion of the potential approaches to organizing the physical climate indicators. Once several approaches were identified, the groups then worked to define specific measurements, or types of measurements, that could be used to create the indicators.

Roberts, Brent↗

NASA Kennedy Space Center: Contributions to Sea Turtle Science and Conservation

The National Aeronautics and Space Administration (NASA) is a United States (US) federal agency that oversees US space exploration and aeronautical research. NASA's primary launch site, Kennedy Space Center (KSC) is located along the east coast of Florida, on Cape Canaveral and the western Atlantic Ocean. The natural environment within KSC's large land boundaries, not only functions as an extensive safety buffer-area, it performs simultaneously as a wildlife refuge and a national seashore. In the early 1960s, NASA was developing KSC for rocket launches and the US was establishing an awareness of, and commitment to protecting the environment. The US began creating regulations that required the consideration of the environment when taking action on federal land or with federal funds. The timing of the US Endangered Species Act (1973), the US National Environmental Policy Act (1972), coincided with the planning and implementation of the US Space Shuttle Program. This resulted in the first efforts to evaluate the impacts of space launch operation operations on waterways, air quality, habitats, and wildlife. The first KSC fauna and flora baseline studies were predominantly performed by University of Central Florida (then Florida Technological University). Numerous species of relative importance were observed and sea turtles were receiving regulatory review and protection as surveys by Dr. L Ehrhart (UCF) from 1973-1978 described turtles nesting along the KSC beaches and foraging in the KSC lagoon systems. These data were used in the first NASA Environmental Impact Statement for the Space Transportation System (shuttle program) in 1980. In 1982, NASA began a long term ecological monitoring program with contracted scientists on site. This included efforts to track sea turtle status and trends at KSC and maintain protective measures for these species. Many studies and collaborations have occurred on KSC over these last 45 years with agencies (USFWS, NOAA, NAVY), students, and universities (UCF, University of Toronto, Texas A&M, UF). This presentation will review the various studies and collaborations on sea turtles at KSC that include: nest distributions and success, stranding network development, aerial survey testing for nest counts, predator control assessments, the earliest baseline blood chemistry health determinations on nesting females, stress hormones in nesting females, multi-year study of hatchling sex ratios, genetics, species composition, abundance and distribution of in-water juveniles, turtle cold stun response, exterior lighting impacts and control, and satellite tag tracking of post-nesting turtles in the vicinity of near shore shoals and sand mining sites. Through these studies, monitoring, and recommendations, KSC has provided excellent stewardship and protection of the local environment. While conducting its space program mission, KSC has also made significant contributions of information for agencies charged with the conservation and management of these species

Provancha, Jane A.↗