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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 253 records · Page 14

SARS-CoV2 billion-compound docking

Abstract This dataset contains ligand conformations and docking scores for 1.4 billion molecules docked against 6 structural targets from SARS-CoV2, representing 5 unique proteins: MPro, NSP15, PLPro, RDRP, and the Spike protein. Docking was carried out using the AutoDock-GPU platform on the Summit supercomputer and Google Cloud. The docking procedure employed the Solis Wets search method to generate 20 independent ligand binding poses per compound. Each compound geometry was scored using the AutoDock free energy estimate, and rescored using RFScore v3 and DUD-E machine-learned rescoring models. Input protein structures are included, suitable for use by AutoDock-GPU and other docking programs. As the result of an exceptionally large docking campaign, this dataset represents a valuable resource for discovering trends across small molecule and protein binding sites, training AI models, and comparing to inhibitor compounds targeting SARS-CoV-2. The work also gives an example of how to organize and process data from ultra-large docking screens.

60 APPLIED LIFE SCIENCES↗

Resonant inelastic x-ray scattering in warm-dense Fe compounds beyond the SASE FEL resolution limit

Resonant inelastic x-ray scattering (RIXS) is a widely used spectroscopic technique, providing access to the electronic structure and dynamics of atoms, molecules, and solids. However, RIXS requires a narrow bandwidth x-ray probe to achieve high spectral resolution. The challenges in delivering an energetic monochromated beam from an x-ray free electron laser (XFEL) thus limit its use in few-shot experiments, including for the study of high energy density systems. Here we demonstrate that by correlating the measurements of the self-amplified spontaneous emission (SASE) spectrum of an XFEL with the RIXS signal, using a dynamic kernel deconvolution with a neural surrogate, we can achieve electronic structure resolutions substantially higher than those normally afforded by the bandwidth of the incoming x-ray beam. We further show how this technique allows us to discriminate between the valence structures of Fe and Fe2O3, and provides access to temperature measurements as well as M-shell binding energies estimates in warm-dense Fe compounds.

74 ATOMIC AND MOLECULAR PHYSICS↗

The role of detonation condensates on the performance of 1,3,5-triamino-2,4,6-trinitrobenzene (TATB) detonation

Thermochemical models of detonation are widely used to estimate energy delivery, but they are based on the assumption that the carbon-rich condensates (soot) formed during detonation are very similar to bulk carbon. Here, we present an analytic equation of state (EOS) based on experimental detonation data for soot formed during the detonation of triaminotrinitrobenzene (TATB)-based high explosives. X-ray photoelectron spectra of several detonation soots are used to determine the elemental nitrogen abundance, with surprisingly high values for TATB. The proposed TATB soot EOS is highly compressible at low pressures and shares some features of glassy carbon, exhibiting graphite- and diamond-like behavior as a function of pressure. We demonstrate the influence of formed soot on detonation performance, including a lowering of the detonation velocity at typical charge densities, and a more compressive product Hugoniot at overdriven conditions. The soot model improves the accuracy of thermochemical calculations for TATB-based explosives across a wide range of states. Detonation velocity predictions for HMX (cyclotetramethylene-tetranitramine)-TATB blends with 80% or more TATB content, as well predictions for 1,3-diamino-2,4,6-trinitrobenzene (DATB) and 3-nitro-1,2,4-triazol-5-one (NTO), which share some features with TATB, are also improved.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Fermionic quantum processing with programmable neutral atom arrays

Simulating the properties of many-body fermionic systems is an outstanding computational challenge relevant to material science, quantum chemistry, and particle physics.-5.4pc]Please note that the spelling of the following author names in the manuscript differs from the spelling provided in the article metadata: D. González-Cuadra, D. Bluvstein, M. Kalinowski, R. Kaubruegger, N. Maskara, P. Naldesi, T. V. Zache, A. M. Kaufman, M. D. Lukin, H. Pichler, B. Vermersch, Jun Ye, and P. Zoller. The spelling provided in the manuscript has been retained; please confirm. Although qubit-based quantum computers can potentially tackle this problem more efficiently than classical devices, encoding nonlocal fermionic statistics introduces an overhead in the required resources, limiting their applicability on near-term architectures. In this work, we present a fermionic quantum processor, where fermionic models are locally encoded in a fermionic register and simulated in a hardware-efficient manner using fermionic gates. We consider in particular fermionic atoms in programmable tweezer arrays and develop different protocols to implement nonlocal gates, guaranteeing Fermi statistics at the hardware level. We use this gate set, together with Rydberg-mediated interaction gates, to find efficient circuit decompositions for digital and variational quantum simulation algorithms, illustrated here for molecular energy estimation. Finally, we consider a combined fermion-qubit architecture, where both the motional and internal degrees of freedom of the atoms are harnessed to efficiently implement quantum phase estimation as well as to simulate lattice gauge theory dynamics.

74 ATOMIC AND MOLECULAR PHYSICS↗

Experimental 3-dimensional tracking of the dynamics of a single electron in the Fermilab Integrable Optics Test Accelerator (IOTA)

We present the results of experimental studies on the transverse and longitudinal dynamics of a single electron in the IOTA storage ring. IOTA is a flexible machine dedicated to beam physics experiments with electrons and protons. A method was developed to reliably inject and circulate a controlled number of electrons in the ring. A key beam diagnostic system is the set of sensitive high-resolution digital cameras for the detection of synchrotron light emitted by the electrons. With 60–130 electrons in the machine, we measured beam lifetime and derived an absolute calibration of the optical system. At exposure times of 0.5 s, the cameras were sensitive to individual electrons. Camera images were used to reconstruct the time evolution of oscillation amplitudes of a single electron in all 3 degrees of freedom. The evolution of amplitudes directly showed the interplay between synchrotron-radiation damping, quantum excitations, and scattering with the residual gas. From the distribution of measured single-electron oscillation amplitudes, we deduced transverse emittances, momentum spread, damping times, and beam energy. Estimates of residual-gas density and composition were calculated from the measured distributions of vertical scattering angles. Combining scattering and lifetime data, we also provide an estimate of the aperture of the ring. To our knowledge, this is the first time that the dynamics of a single electron are tracked in all three dimensions with digital cameras in a storage ring.

43 PARTICLE ACCELERATORS↗

Measurement of the mean excitation energy of liquid argon

The mean excitation energy (I-value) of liquid argon is a critical input for energy estimation in neutrino oscillation experiments. It is measured to be 199 +4 -5 eV using the range of 402.2 MeV protons from the Fermilab Linac. This compares to the author's recent evaluation of (197 ± 7) eV based on a combination of an oscillator strength distribution analysis, gaseous argon range measurements, sparse stopping power data on solid argon, and an extrapolation of data on the effect of phase from other substances. Using all sources of information, we recommend a value of (198 ± 4) eV for liquid argon, which is significantly higher than 188 eV, from ICRU-37's gaseous argon evaluation, commonly used in Monte Carlo codes such as Geant4.

47 OTHER INSTRUMENTATION↗

Kinematically enhanced interpolating operators for boosted hadrons

We propose to use interpolating operators for lattice quantum chromodynamics calculations of highly boosted pions and nucleons with kinematically enhanced ground-state overlap factors at large momentum. Because this kinematic enhancement applies to the signal but not the variance of the correlation function, these interpolating operators can achieve better signal-to-noise ratios at large momentum. We perform proof-of-principle calculations with boosted pions and nucleons using close-to-physical and larger quark masses to explore the utility of our proposal. Results for effective energies and matrix elements, as well as Lanczos ground-state energy estimators, are consistent with theoretical expectations for signal-to-noise improvement at large momenta.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Lanczos Algorithm, the Transfer Matrix, and the Signal-to-Noise Problem

This Letter introduces a method for determining the energy spectrum of lattice quantum chromodynamics by applying the Lanczos algorithm to the transfer matrix and using a bootstrap generalization of the Cullum-Willoughby method to filter out spurious eigenvalues. Proof-of-principle analyses of the simple harmonic oscillator and the lattice quantum chromodynamics proton mass demonstrate that this method provides faster ground-state convergence than the “effective mass,” which is related to the power-iteration algorithm. Lanczos provides more accurate energy estimates than multistate fits to correlation functions with small imaginary times while achieving comparable statistical precision. Two-sided error bounds are computed for Lanczos results and guarantee that excited-state effects cannot shift Lanczos results far outside their statistical uncertainties.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Nearly optimal state preparation for quantum simulations of lattice gauge theories

Here, we present several improvements to the recently developed ground-state preparation algorithm based on the quantum eigenvalue transformation for unitary matrices (QETU), apply this algorithm to a lattice formulation of U(1) gauge theory in (2+1) dimensions, as well as propose an alternative application of QETU, a highly efficient preparation of Gaussian distributions. The QETU technique was originally proposed as an algorithm for nearly optimal ground-state preparation and ground-state energy estimation on early fault-tolerant devices. It uses the time-evolution input model, which can potentially overcome the large overall prefactor in the asymptotic gate cost arising in similar algorithms based on the Hamiltonian input model. We present modifications to the original QETU algorithm that significantly reduce the cost for the cases of both exact and Trotterized implementation of the time evolution circuit. We use QETU to prepare the ground state of a U(1) lattice gauge theory in two spatial dimensions, explore the dependence of computational resources on the desired precision and system parameters, and discuss the applicability of our results to general lattice gauge theories. We also demonstrate how the QETU technique can be utilized for preparing Gaussian distributions and wave packets in a way which outperforms existing algorithms for as little as n q ≳ 2–5 qubits.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

ScaleML: Machine Learning based Heap Memory Object Scaling Prediction

Memory subsystem contributes 28-40% of total energy consumption. Several studies investigated energy prediction and consumption via profiling memory object access patterns. However, such profiling leads to higher energy consumption due to intense memory object-level profiling to achieve high prediction accuracy. Further, memory object access pattern prediction has been considered through analyzing the variation between memory object access patterns, referred to as scaling rate. The existing techniques for scaling rate prediction, such as Linear Scaling Rate (LSR), suffer from a high error rate in prediction with changes in access patterns, which leads to a high error rate of energy consumption prediction. In this paper, we compare and evaluate several memory object access pattern prediction models including LSR and machine learning (ML) models. Further, we propose SCALEML, a heap memory object scaling rate prediction mechanism that employs an ML model to achieve high access pattern prediction accuracy with variations in memory object access patterns. We evaluate SCALEML using various application benchmarks. The experimental results show that SCALEML achieves about 20% higher accuracy than the LSR model for predicting the scaling rate of object access patterns and energy estimation.

Park, Joongeon↗

WattAMeter [SWR-25-101]

WattAMeter is a Python package for monitoring and recording power consumption over time, enabling users to collect time series data on CPU, GPU, and RAM power usage. It also estimates energy consumption and CO₂ emissions.

da Silva Pereira, Weslley [National Renewable Ener↗

SARS-CoV2 Docking Dataset

Description: Small-molecule conformations and docking scores for 1.4 billion molecules docked against 6 protein targets from SARS-CoV2: MPro 5R84, MPro 6WQF, NSP15 6WLC, PLPro 7JIR, Spike 6M0J, and a hand-optimized model of the RNA-dependent RNA polymerase. Docking was carried out using the Autodock-GPU program performing 20 independent structure minimizations per dock - saving 3 results per molecule. Scores reported include the Autodock free energy estimate as well as RF3 and VS-DUD-E v2 machine-learned rescoring models. Protein structure files and maps in the format input to Autodock-GPU are included. Literature Ref: Supercomputer-Based Ensemble Docking Drug Discovery Pipeline with Application to Covid-19, J. Chem. Inf. Model. 2020, 60(12): 5832–5852.

36 MATERIALS SCIENCE↗

Flight Arrival Data for Each Airport

This dataset contains flight arrival data for each airport, which serves as the input for generating load profiles and estimating energy needs and fleet and charger requirements. ![image](distribution-flight-arrivals.png) Distribution of annual flight arrivals across different airport categories.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

A Virtual Element Method for the Full MHD system

In this manuscript we present a novel discretization for the incompressible MHD system. Our approach follows the framework of the Virtual Element Method and offers two main advantages. The method can be implemented in unstructured meshes making it highly versatile and capable of handling a wide array of problems involving interfaces, free-boundaries or adaptive refinements on the mesh. The second advantage involves the divergence of the magnetic field, our approach guarantees that it remains solenoidal. We include a theoretical proof of the condition on the magnetic field as well as energy estimates and a well-posedness study. The latter sheds light as to the stability properties of the method.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

LGAD Single Event Burnout Studies

We report on simulation of single event burnout of low gain avalanche diodes during high voltage operation after irradiation. A model is described which can be used to estimate energy deposition needed for single event burnout and the dependence of burnout on thermal conductivity and thermal resistance to heat sinks.

74 ATOMIC AND MOLECULAR PHYSICS↗

Reduction of Iron (III) Oxide in Microwaves Toward Gasification Studies

The purpose of this study is to reduce hematite (Fe2O3) using hydrogen (H2), carbon monoxide (CO), and methane (CH4) gases using microwave irradiation. Conventional temperature programmed reduction of iron phase transformation under H2, CO, and CH4 agree with the literature. Furthermore, the activation energy for the iron phase transformation in a conventional reactor was in the order of H2>CO>CH4, suggesting that CH4 was the best reductant to initiate the reduction at a much lower temperature than CO, and CO was significantly better than H2 atmosphere. Due to the uneven temperature distribution, the apparent activation energy of microwave reduction under H2 was approximately 1/4th when compared to the conventional reduction in H2. X-ray diffraction (XRD) analysis showed a mixed oxide phase in microwave reduction as opposed to the clear phase transformation in conventional studies. To combat the temperature measurement issues in microwave studies, fiber optic sensors and Forward Looking InfraRed (FLIR) sensors were used to acquire the actual temperature distribution in the catalyst bed. Therefore, a reasonably accurate activation energy estimation was achieved in the catalyst bed. Combining these with the characterization and quantification of the different iron phases in microwave reduction will provide a blueprint for future microwave-assisted gasification studies.

Aireddy, Divakar Reddy↗

Simulation of a High-Confinement Tidal Energy Array (Abstract)

When the projected area of a current turbine array occupies a substantial fraction of a tidal or river channel cross-sectional area, the confinement associated with the channel boundaries substantially increases turbine efficiency. This effect can be exploited to substantially reduce the levelized cost of energy for current turbine arrays. However, the presence of such an array will affect inflow velocity, water depth, and circulation in the surrounding area. This has implications for array performance and environmental impacts. This project combines existing numerical modeling capability from PNNL with an understanding of confined array performance from UW. The work will 1) Simulate tidal currents and water surface elevation in a regional circulation model that includes the Knik Arm site at appropriate resolution; 2) Incorporate a varying thrust coefficient into this model that reflects the outcomes of tidal hydrodynamic simulations of confined turbine arrays; 3) Use the model to determine the effects of array operation on water levels and inflow conditions as a function of different blockage ratios and control strategies; and 4) Identify the “far field” environmental implications of operating an array of this type. UW will use the outputs from this model to evaluate the implications of “feedback effects” and variable inflow conditions on levelized cost of energy estimates for a confinement exploiting array of cross-flow turbines.

16 TIDAL AND WAVE POWER↗

Modelling detector-specific reconstruction uncertainties in LAr-TPC

The Short-Baseline Neutrino (SBN) program features three Liquid Argon Time Projection Chamber (LAr-TPC) detectors positioned along the Booster Neutrino Beam (BNB) axis: the Short Baseline Neutrino Near Detector, MicroBooNE, and the ICARUS T600. As the largest operational LAr-TPC, ICARUS T600 serves as the far detector, located 600 m from the BNB target. While its primary goal is to record neutrino events, it also detects other ionizing events, including cosmic rays. This work focuses on analyzing and modeling detector-specific reconstruction uncertainties in LAr-TPC. These inefficiencies, identified during the Pattern Recognition phase handled by the PANDORA algorithm, impact subsequent Particle Fits and Offline Analysis. Specifically, inaccuracies in track reconstruction can lead to significant physical consequences, such as erroneous particle energy estimates and poor Particle Identification (PID), reducing the efficiency of neutrino event characterization. A key issue addressed is split tracks, caused by missing hits or incomplete track stitching by PANDORA. The aim of this internship is to characterize, model, and quantify the impact of split tracks on track reconstruction.

43 PARTICLE ACCELERATORS↗