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At least 271 records · Page 15
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Development of DNA methylation‐based epigenetic age predictors in loblolly pine ( Pinus taeda )

Abstract Biological ageing is connected to life history variation across ecological scales and informs a basic understanding of age‐related declines in organismal function. Altered DNA methylation dynamics are a conserved aspect of biological ageing and have recently been modelled to predict chronological age among vertebrate species. In addition to their utility in estimating individual age, differences between chronological and predicted ages arise due to acceleration or deceleration of epigenetic ageing, and these discrepancies are linked to disease risk and multiple life history traits. Although evidence suggests that patterns of DNA methylation can describe ageing in plants, predictions with epigenetic clocks have yet to be performed. Here, we resolve the DNA methylome across CpG, CHG, and CHH‐methylation contexts in the loblolly pine tree ( Pinus taeda ) and construct epigenetic clocks capable of predicting ages in this species within 6% of its maximum lifespan. Although patterns of CHH‐methylation showed little association with age, both CpG and CHG‐methylation contexts were strongly associated with ageing, largely becoming hypomethylated with age. Among age‐associated loci were those in close proximity to malate dehydrogenase, NADH dehydrogenase, and 18S and 26S ribosomal RNA genes. This study reports one of the first epigenetic clocks in plants and demonstrates the universality of age‐associated DNA methylation dynamics which can inform conservation and management practices, as well as our ecological and evolutionary understanding of biological ageing in plants.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2021

An Improved Method for Extracting, Sorting, and AMS Dating of Pollen Concentrates From Lake Sediment

High-resolution chronologies are crucial for paleoenvironmental reconstructions, and are particularly challenging for lacustrine records of terrestrial paleoclimate. Accelerator Mass Spectrometry (AMS) radiocarbon measurement of terrestrial macrofossils is the most common technique for building age models for lake sediment cores, but relies on the presence of terrestrial macrofossils in sediments. In the absence of sufficient macrofossils, pollen concentrates represent a valuable source of dates for building high-resolution chronologies. However, pollen isolation and dating may present several challenges, as has been reported by different authors in previous work over the last few decades. Here we present an improved method for extracting, purifying and radiocarbon-dating pollen concentrates using flow cytometry to improve the extraction efficiency and the purity of the pollen concentrates. Overall, the nature of the sediments and the abundance of the pollen represent major considerations in obtaining enough pollen grains and, consequently, enough carbon to be dated. Further, the complete separation of pollen from other forms of organic matter is required to ensure the accuracy of the dates. We apply the method to surface samples and sediment cores recovered from two contrasting lake basins on the eastern side of the Sierra Nevada (California), and describe the variations that may be used to optimize pollen preparation from a variety of sediments.

58 GEOSCIENCES↗
NASA NTRS2016

The Mexican Drought Atlas: Tree-Ring Reconstructions of the Soil Moisture Balance During the Late Pre-Hispanic, Colonial, and Modern Eras

Mexico has suffered a long history and prehistory of severe sustained drought. Drought over Mexico is modulated by ocean-atmospheric variability in the Atlantic and Pacific, raising the possibility for long-range seasonal climate forecasting, which could help mediate the economic and social impacts of future dry spells. The instrumental record of Mexican climate is very limited before 1920, but tree-ring chronologies developed from old-growth forests in Mexico can provide an excellent proxy representation of the spatial pattern and intensity of past moisture regimes useful for the analysis of climate dynamics and climate impacts. The Mexican Drought Atlas (MXDA) has been developed from an extensive network of 252 climate sensitive tree-ring chronologies in and near Mexico. The MXDA reconstructions extend from 1400 CE-2012 and were calibrated with the instrumental summer (JJA) self-calibrating Palmer Drought Severity Index (scPDSI) on a 0.5deg latitude/longitude grid extending over land areas from 14 to 34degN and 75-120degW using Ensemble Point-by-Point Regression (EPPR) for the 1944-1984 period. The grid point reconstructions were validated for the period 1920-1943 against instrumental gridded scPDSI values based on the fewer weather station observations available during that interval. The MXDA provides a new spatial perspective on the historical impacts of moisture extremes over Mexico during the past 600-years, including the Aztec Drought of One Rabbit in 1454, the drought of El Ano de Hambre in 1785-1786, and the drought that preceded the Mexican Revolution of 1909-1910. The El Nino/Southern Oscillation (ENSO) is the most important ocean-atmospheric forcing of moisture variability detected with the MXDA. In fact, the reconstructions suggest that the strongest central equatorial Pacific sea surface temperature (SST) teleconnection to the soil moisture balance over North America may reside in northern Mexico. This ENSO signal has stronger and more time-stable correlations than computed for either the Atlantic Multidecadal Oscillation or Pacific Decadal Oscillation. The extended Multivariate ENSO Index is most highly correlated with reconstructed scPDSI over northern Mexico, where warm events favor moist conditions during the winter, spring, and early summer. This ENSO teleconnection to northern Mexico has been strong over the past 150 years, but it has been comparatively weak and non-stationary in the MXDA over central and southern Mexico where eastern tropical Pacific and Caribbean/tropical Atlantic SSTs seem to be more important. The ENSO teleconnection to northern Mexico is weaker in the available instrumental PDSI, but analyses based on the millennium climate simulations with the Community Earth System Model suggest that the moisture balance during the winter, spring, and early summer over northern Mexico may indeed be particularly sensitive to ENSO forcing. Nationwide drought is predicted to become more common with anthropogenic climate change, but the MXDA reconstructions indicate that intense "All Mexico" droughts have been rare over the past 600 years and their frequency does not appear to have increased substantially in recent decades.

El Nino↗
NASA NTRS2015

The Archaeology of Little Wood Creek: New Chronometric Evidence

This study reports on the establishment of viable dates for several major cultural components at the Little Wood Creek site on the upper Hudson in Fort Edward, New York. The original excavation in the mid-1980s (Grossman et al. 1990) resulted in the identification of two major periods of occupation, a deeply buried Transitional period sequence of living floors, and closer to the surface, and separated by circa five feet of sterile alluvium, a series of Late Woodland period pits and features. Both are overlain by the discovery of the southern bastion of Revolutionary War-era Fort Edward. Ambiguities in the original bulk radiocarbon dating of the site left it in chronological limbo with widely divergent determinations for both prehistoric occupation periods. New AMS dates from 10 samples, four Transitional period and six Late Woodland period assays, both refined the absolute chronology of the site complex and clarified several major issues in the cultural and environmental history of the region. Together, these two sets of dates, combined with recent high resolution environmental sequences, provide sufficient resolution to correlate the newly defined periods of occupation with major events in the pollen and climate record of eastern New York State.

chronology↗
NASA NTRS2023

The Complex Exhumation History of Jezero Crater Floor Unit and Its Implication for Mars Sample Return

During the first year of NASA's Mars 2020 mission, Perseverance rover has investigated the dark crater floor unit of Jezero crater and four samples of this unit have been collected. The focus of this paper is to assess the potential of these samples to calibrate the crater-based Martian chronology. We first review the previous estimation of crater-based model age of this unit. Then, we investigate the impact crater density distribution across the floor unit. It reveals that the crater density is heterogeneous from areas which have been exposed to the bombardment during the last 3 Ga to areas very recently exposed to bombardment. It suggests a complex history of exposure to impact cratering. We also display evidence of several remnants of deposits on the top of the dark floor unit across Jezero below which the dark floor unit may have been buried. We propose the following scenario of burying/exhumation: the dark floor unit would have been initially buried below a unit that was a few tens of meters thick. This unit then gradually eroded away due to Aeolian processes from the northeast to the west, resulting in uneven exposure to impact bombardment over 3 Ga. A cratering model reproducing this scenario confirms the feasibility of this hypothesis. Due to the complexity of its exposure history, the Jezero dark crater floor unit will require additional detailed analysis to understand how the Mars 2020 mission samples of the crater floor can be used to inform the Martian cratering chronology.

Mars 2020↗
DOE OSTI2021

An uncertainty-focused database approach to extract spatiotemporal trends from qualitative and discontinuous lake-status histories

Changes in lake status are often interpreted as palaeoclimate indicators due to their dependence on precipitation and evaporation. The Global Lake Status Database (GLSDB) has since long provided a standardised synopsis of qualitative lake status over the last 30,000 14C years. Potential sources of uncertainty however are not recorded in the GLSDB. Here we present an updated and improved relational-database framework that incorporates uncertainty in both chronology and the interpretation of palaeoenvironmental data. The database uses peer-reviewed palaeolimnological studies to produce a consensus on qualitative lake-status histories, whose chronologies are revised and standardized through the recalibration of radiocarbon dates and the application of Bayesian age-depth modelling for stratigraphic archives. Quantitative information on absolute water-level elevation is preserved if available from geomorphological sources. We also propose a new probabilistic analytical framework that accounts for these uncertainties to reconstruct synoptic, integrated environmental signals. The process is based on a Monte Carlo algorithm that iteratively samples individual lake-status histories within the limits of their uncertainties to produce many possible scenarios. We then use Recursively-Subtracted Empirical Orthogonal Function analysis to extract dominant patterns of lake-status variability from these scenarios. As a proof of concept, we apply this framework to 67 sites in eastern and southern Africa whose lake-status histories cover part of the late Pleistocene and/or Holocene. We show that, despite the sometimes large temporal and interpretation uncertainties, and the inclusion of highly discontinuous lake-status time series, identifying the major known millennial-scale climatic phases during the last 20,000 years is possible. Our framework was also able to identify an antiphased response between the lake basins in eastern and interior southern Africa to these changes. Here, we propose that our new database and methodology framework serves as a template for efficient lake-status data synthesis, encourages the incorporation of lake-status data in palaeoclimate syntheses, and expands the possibilities for the use of such data in the evaluation of climate models.

58 GEOSCIENCES↗
DOE OSTI2021

Chronostratigraphy of talus flatirons and piedmont alluvium along the Book Cliffs, Utah – Testing models of dryland escarpment evolution

Research on the evolution of dryland escarpments and what drives and controls their erosional retreat have been limited by a lack of chronologically constrained records. Prior investigations of escarpments in the southwestern U.S. and globally garner two endmember conceptual models -- one focused on bottom-up baselevel drivers and autogenic variations in piedmont and toeslope erosion processes, the other focused on the role of climate as a top-down forcing mechanism on sediment production and transport from cliffs. In this work, we test these conceptual models along a section of the Book Cliffs in central Utah, where climate has varied strongly and baselevel has fallen significantly over the late Quaternary. Four generations of talus flatirons and piedmont terraces are preserved in the study area we date them by optically stimulated luminescence and 10Be-exposure techniques. OSL depositional ages cluster into four generations of deposits with mean ages and mean standard errors of 117.8 ± 6.7 ka, 83.4 ± 3.3 ka, 52.4 ± 1.8 ka, and 5.6 ± 0.3 ka. 10Be-exposure results from talus boulders protruding from flatirons confirm that the youngest generation of talus is Holocene, with recent rock-fall boulders still being received on the landform top. Older flatiron generations produce incoherent, minimum exposure ages reflecting an increasing dominance of in situ boulder weathering and a steady-state denudation rate of ~45 mm/ky after tens of thousands of years. Based on the chronostratgraphy and correlation of talus and piedmont deposits, we interpret climate as the primary control on escarpment evolution. Depositional ages do not correspond to glacial epochs as historically presumed, but instead to episodes of intermediate and unstable or variable Pleistocene climate during Marine Isotope Stage-3 and 5 a/b. Results support the significance of high climate variability at millennial timescales in driving both sediment production by mass wasting from the cliff as well as sediment storage and reworking along the piedmont. In contrast, wetter climates of glacial epochs apparently caused greater erosion and sediment transport to trunk drainages. Our chronology also reveals a systematic decrease in deposit age with increasing distance up the piedmont from the regional baselevel of the Price River, consistent with transient fluvial incision and terrace abandonment. The Book Cliffs record notably does not correlate with similarly constrained records in Spain or the contrasting record from the Negev, yet they all share the feature of enhanced talus deposition and cliff retreat corresponding to climate instability rather than in response to steady glacial-climate conditions. Thus, we outline a model of escarpment evolution and retreat governed largely by top-down climate-forcing of sediment production and transport during climate variability, with local changes in baselevel and erosional processes on the piedmont being a modifying, secondary factor.

58 GEOSCIENCES↗
DOE OSTI2020

Deeper snow increases the net soil organic carbon accrual rate in moist acidic tussock tundra: 210Pb evidence from Arctic Alaska

The net change in the carbon inventory of arctic tundra remains uncertain as global warming leads to shifts in arctic water and carbon cycles. To better understand the response of arctic tundra carbon to changes in winter precipitation amount, we investigated soil depth profiles of carbon concentration and radionuclide activities ( 7 Be, 137 Cs, 210 Pb, and 241 Am) in the active layer of a twenty-two-year winter snow depth manipulation experiment in moist acidic tussock tundra at Toolik Lake, Alaska. Depth correlations of cumulative carbon dry mass (g cm -2 ) vs. unsupported 210 Pb activity (mBq g -1 ) were examined using a modified constant rate of supply (CRS) model. Results were best fit by two-slope CRS models indicating an apparent step temporal increase in the accumulation rate of soil organic carbon. Most of the best-fit model chronologies indicated that the increase in carbon accumulation rate apparently began and persisted after snow fence construction in 1994. The inhomogeneous nature of permafrost soils and their relatively low net carbon accumulation rates make it challenging to establish robust chronologic records. Nonetheless, the data obtained in this study support a decadal-scale increase in net soil organic carbon accumulation rate in the active layer of arctic moist acidic tussock tundra under conditions of increased winter precipitation.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Exposure to ionizing radiation disrupts normal epigenetic aging in Japanese medaka

Alterations to the epigenome are a hallmark of biological aging and age-dependent patterning of the DNA methylome (“epigenetic aging”) can be modeled to produce epigenetic age predictors. Rates of epigenetic aging vary amongst individuals and correlate to the onset of age-related disease and all-cause mortality. Yet, the origins of epigenetic-to-chronological age discordance are not empirically resolved. Here, we investigate the relationship between aging, DNA methylation, and environmental exposures in Japanese medaka (Oryzias latipes). We find age-associated DNA methylation patterning enriched in genomic regions of low CpG density and that, similar to mammals, most age-related changes occur during early life. We construct an epigenetic clock capable of predicting chronological age with a mean error of 61.1 days (~8.4% of average lifespan). To test the role of environmental factors in driving epigenetic age variation, we exposed medaka to chronic, environmentally relevant doses of ionizing radiation. Because most organisms share an evolutionary history with ionizing radiation, we hypothesized that exposure would reveal fundamental insights into environment-by-epigenetic aging interactions. Radiation exposure disrupted epigenetic aging by accelerating and decelerating normal age-associated patterning and was most pronounced in cytosines that were moderately associated with age. These findings empirically demonstrate the role of DNA methylation in integrating environmental factors into aging trajectories.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2021

Redefining Resource Adequacy for Modern Power Systems: A Report of the Redefining Resource Adequacy Task Force

Today's rapidly increasing levels of wind, solar, storage, and load flexibility require the industry to rethink reliability planning and resource adequacy methods for modern power systems. Periods with a risk of shortfall often no longer coincide with peak demand - reliability risks are less about peak load and more about the daily setting of the sun, extended cloud cover, wind speeds, cold snaps, and heat waves. In addition, demand is increasingly flexible. Key resources are time-sensitive, as batteries need time to recharge and electricity customers can only be asked to provide demand response for just so long. And reliability failures are often correlated - with one another and with the weather. Two driving factors require the industry to reconsider its analytical approach for resource adequacy: (1) Chronological grid operations: The increasing importance of variable renewable resources (such as wind and solar) and of energy-limited resources (storage and demand response) make it essential to understand the full year of chronological operation of the grid. Specific attention must be paid to hourly, seasonal, and inter-annual resource variability. The sequence of the variability is key, as energy-limited resources such as batteries or demand response require either a preceding period or subsequent period of high production to be useful for grid reliability. (2) Correlated events: Historically, resource adequacy analysis focused on shortfalls caused by random, discrete mechanical failures of large generating units. In contrast, shortfalls today are often caused by multiple, correlated events caused by common weather patterns. Resource adequacy analysis must increasingly shift its focus to these correlated events. The redesign of resource adequacy methods will benefit from a set of guiding principles to better allow for sharing of insights and best practices, interregional resource coordination, and a smoother regulatory process for resource procurement. The objective of this report is to move this redesign forward. It provides an overview of key drivers changing the way resource adequacy needs to be evaluated, identifies shortcomings of conventional approaches, and outlines first principles for practitioners to consider as they adapt their approaches. The central message is: what got us here won't get us there.

24 POWER TRANSMISSION AND DISTRIBUTION↗
NASA NTRS1973

Re-187, recycling r-process elements through stars, and the age of the Galaxy.

The enhanced beta-decay rate of ionized Re-187 in stars has been studied within the context of a detailed numerical model of the production of r-process elements and their recycling through stars during the course of galactic evolution. It is concluded that the enhanced decay rate does not significantly reduce the Re-Os chronometer age for the Galaxy. Consequently, the Re-187 beta-decay half-life and the Os-186/Os-187 neutron cross-section ratio remain as the significant uncertainties in this chronology. Unlike the uncertainties in other chronologies, both are amenable to laboratory measurements.

Talbot, R. J., Jr.↗
NASA NTRS1978

The tectonic and volcanic history of Mercury as inferred from studies of scarps, ridges, troughs, and other lineaments

Tectonic and volcanic modification of the Mercurian surface is discussed, and nine landform classes are defined. An evolutionary chronology, based on reported interpretations of scarp, ridge, trough, and other lineament features, is presented, and the roles (in chronological order) of accretion and differentiation, tidal spindown, plains volcanism, heavy bombardment, cooling/contraction, Caloris impact, intense surface modification, basin subsidence, local plains volcanism, isostatic basin uplift, and light cratering are considered. The observational data were obtained by Mariner 10.

Dzurisin, D.↗
NASA NTRS1981

Martian ages

Four discussions are conducted: (1) the methodology of relative age determination by impact crater statistics, (2) a comparison of proposed Martian impact chronologies for the determination of absolute ages from crater frequencies, (3) a report on work dating Martian volcanoes and erosional features by impact crater statistics, and (4) an attempt to understand the main features of Martian history through a synthesis of crater frequency data. Two cratering chronology models are presented and used for inference of absolute ages from crater frequency data, and it is shown that the interpretation of all data available and tractable by the methodology presented leads to a global Martian geological history that is characterized by two epochs of activity. It is concluded that Mars is an ancient planet with respect to its surface features.

Neukum, G.↗
NASA NTRS1982

Effects of moisture, residual thermal curing stresses, and mechanical load on the damage development in quasi-isotropic laminates

This investigation demonstrates how moisture absorbed in (0/+ or - 45/90)s and (0/90/+ or - 45)s graphite epoxy laminates significantly alters the stress state and chronology of damage development along the laminate edge during static tension and tension-tension cyclic loading. Emphasis is placed on using reasonable approximations for wet and dry elastic properties, including out-of-plane properties (nu sub 23 and G sub 23), since these properties are required by finite element and shear lag models to predict the stress state at the laminate edge. Moisture was observed to alter the dry edge stress state in the 90-deg plies of the (0/+ or - 45/90)s laminate such that delaminations occurred at a lower load and transverse cracks occurred at a higher load. A model was developed which predicted the differences in loads required to initiate damage in the 90-deg plies of the two laminates in the wet and dry conditions. Although moisture can alter the chronology of damage development, the damage state in each laminate observed prior to fracture appeared to be independent of moisture content.

Kriz, R. D.↗
NASA NTRS1983

Pieces of the ancient lunar crust - Ages and composition of clasts in consortium breccia 67915

The composition and chronology of clasts representing three minor lithologies in consortium breccia 67915 are discussed. The lithologies studied are: sodic ferrogabbro, pristine troctolitic anorthosite (67915,26), and granulitic troctolitic anorthosite (67915,67). These lithologies were presumed to represent samples of the ancient lunar crust. The pristine troctolitic anorthosite, a typical member of the pristine anorthosite suite, contains little or no trapped liquid consistent with its two-phase mineralogy. The plagioclase separates have Ar-39-Ar-40 plateau ages of 4.10 + or - 0.06 b.y., and a final rise in the age pattern may represent a 'memory' of the earlier evolution. The granulitic troctolitic anorthosite, which has 13 times larger REE abundances, displays a continuous rise of the Ar-40/Ar-39 ratio. The last 25 percent of the Ar-39 release data establish a minimum age of over 3.5 b.y., but the Pu-244/Nd chronology suggests an age of about 4.3 b.y. The sodic ferrogabbro samples, which appear to be members of the Mg-gabbronorite group of pristine rocks, show large Ar losses but indicate plateaus in the low-temperature data, suggesting a metamorphic event more recently than 260 m.y. ago, a time that is consistent with the North Ray impact event 50 m.y. ago.

Marti, K.↗
NASA NTRS1984

Repeated shock and thermal metamorphism of the Abernathy meteorite

Based on the example of Abernathy (L6 chondrite), it is shown how petrographic investigation can be used to unravel the nature, chronology and conditions of superposed metamorphic events in chondrites. Features considered include the texture of the rock, optical characteristics of olivine, pyroxene and plagioclase, refractive index of plagioclase, metallographical characteristics and microhardness of Fe-Ni alloys. It is deduced that Abernathy has been involved in at least six metamorphic events since the formation of the chondrite. Four distinct shock events and two separate reheating events have been identified. The chronology of these events is established. The conditions for the last four events are reasonably well constrained. These include severe reheating (T greater than 1200 C); severe shock causing complete melting of plagioclase and local melting of the rock (P between 90 and 110 GPa, T between 1250 and 1350 C); mild shock (P between 10 and 25 GPa, T less than 500 C); and reheating below 800 C.

Lambert, P.↗
NASA NTRS1985

The geomorphology of Rhea - Implications for geologic history and surface processes

Morphological analyses of landforms on Rhea are used to define three physiographic provinces: cratered terrain 1 undifferentiated; cratered terrain 1 lineated; and cratered terrain 2. The important statigraphic relationships between the different provinces are examined with respect to major impact basins and tectonic features. It is shown that the formation of multiringed basins may have caused, or at least controlled the locations of major resurfacing and mantling events. The diameters of the central peaks relative to the impact crater diameters are found to be significantly larger than those within the craters of the moon or Mercury. Both cratered and noncrater lineaments have regional orientations which do not fit current global or regional stress models. On the basis of the morphological analysis, a chronological order is established for the origin of the three provinces: the cratered terrain 1 province was formed first; and cratered terrain 1 lineated and cratered terrain 2 were formed second, and last, respectively. It is shown that the chronological order is generally consistent with current theoretical models of the evolution of Rhea.

Moore, J. M.↗
NASA NTRS1986

Archean metamorphic sequence and surfaces, Kangerdlugssuaq Fjord, East Greenland

The characteristics of Archean metamorphic surfaces and fabrics of a mapped sequence of rocks older than about 3000 Ma provide information basic to an understanding of the structural evolution and metamorphic history in Kangerdlugssuaq Fjord, east Greenland. This information and the additional results of petrologic and geochemical studies have culminated in an extended chronology of Archean plutonic, metamorphic, and tectonic events. The basis for the chronology is considered, especially the nature of the metamorphic fabrics and surfaces in the Archean sequence. The surfaces, which are planar mineral parageneses, may prove to be mappable outside Kangerdlugssuaq Fjord, and if so, will be helpful in extending the events that they represent to other Archean sequences in east Greenland. The surfaces will become especially important reference planes if the absolute ages of their metamorphic assemblages can be determined in at least one location where strain was low subsequent to their recrystallization. Once an isochron is obtained, the dynamothermal age of the regionally identifiable metamorphic surface is determined everywhere it can be mapped.

Kays, M. A.↗