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At least 271 records · Page 15

Energy-Efficient Neuromorphic Architectures for Nuclear Radiation Detection Applications

A comprehensive analysis and simulation of two memristor-based neuromorphic architectures for nuclear radiation detection is presented. Both scalable architectures retrofit a locally competitive algorithm to solve overcomplete sparse approximation problems by harnessing memristor crossbar execution of vector–matrix multiplications. The proposed systems demonstrate excellent accuracy and throughput while consuming minimal energy for radionuclide detection. To ensure that the simulation results of our proposed hardware are realistic, the memristor parameters are chosen from our own fabricated memristor devices. Based on these results, we conclude that memristor-based computing is the preeminent technology for a radiation detection platform.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Reconstruction of jointly sparse vectors via manifold optimization

In this paper, we consider the challenge of reconstructing jointly sparse vectors from linear measurements. Firstly, we show that by utilizing the rank of the output data matrix we can reduce the problem to a full column rank case. This result reveals a reduction in the computational complexity of the original problem and enables a simple implementation of joint sparse recovery algorithms for full-rank setting. Secondly, we propose a new method for joint sparse recovery in the form of a non-convex optimization problem on a non-compact Stiefel manifold. In our numerical experiments our method outperforms the commonly used l 2,1 minimization in the sense that much fewer measurements are required for accurate sparse reconstructions. Here, we postulate this approach possesses the desirable rank aware property, that is, being able to take advantage of the rank of the unknown matrix to improve the recovery.

97 MATHEMATICS AND COMPUTING↗

Entanglement universality of two-qubit X-states

We demonstrate that for every two-qubit state there is a X-counterpart, i.e., a corresponding two-qubit X-state of same spectrum and entanglement, as measured by concurrence, negativity or relative entropy of entanglement. By parametrizing the set of two-qubit X-states and a family of unitary transformations that preserve the sparse structure of a two-qubit X-state density matrix, we obtain the parametric form of a unitary transformation that converts arbitrary two-qubit states into their X-counterparts. Moreover, we provide a semi-analytic prescription on how to set the parameters of this unitary transformation in order to preserve concurrence or negativity. We also explicitly construct a set of X-state density matrices, parametrized by their purity and concurrence, whose elements are in one-to-one correspondence with the points of the concurrence versus purity (CP) diagram for generic two-qubit states. - Highlights: • Parametrization of separable, entangled and rank-specific two-qubit X-states. • Construction of a set of two-qubit X-states exhausting a two-qubit CP-diagram. • Parametrization of a disentangling unitary transformation for any two-qubit X-state. • Unitary transformation of any two-qubit state into a X-state of same entanglement.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

An overlapping Domain Decomposition preconditioning method for monolithic solution of shear bands

Metals subjected to high strain rate impact often exhibit a sudden and profound drop in the material’s load bearing capability, a ductile failure phenomenon known as shear banding. Shear bands, characterized as material instabilities, are driven by shear heating and described as narrow regions that have sustained intense plastic deformation and high temperature rise. This coupled thermo-mechanical localization problem can be formulated as a nonlinear system with two balance equations, momentum and energy, and two constitutive laws for elasticity and plasticity. Here in our formulation, mixed finite elements are used to discretize the equations in space and an implicit finite difference scheme is used to advance the system in time, where at every time step, a Newton type method is used to solve the system monolithically. To that end, a block Jacobian matrix is formed analytically using Gâteaux derivatives. The resulting Jacobian is sparse, nonsymmetric and its sparsity pattern and eigenvalue content vary with the different stages of shear bands formation, consequently posing a significant challenge to iterative solvers. To address this issue, an overlapping Domain Decomposition preconditioner that takes into account the physics of shear bands and the domain in which it forms, is proposed. The key idea is to resolve the shear band domain accurately while only solving the remaining domain approximately, with selective updates when necessary. The preconditioner is formed on the basis of an additive Schwartz method that is applied to a Schur complement partition of the system. The proposed preconditioner is implemented in parallel and tested on three different benchmark problems as compared against off-the-shelf solvers. We study the effect of h- and k-refinement that are obtained from Isogeometric discretizations of the system, the overlapping strategy and its parallel performance. Excellent performance is demonstrated in serial and parallel on all benchmark examples.

42 ENGINEERING↗

The Improved Simple Corner Balance Method and Efforts to Enhance its Computational Performance

The diamond difference (DD) spatial discretization has long been a work horse of the neutron transport community. For nearly as long as DD has been used in neutron transport, it has been observed that DD produces undamped, non-physical angular fluxes in spatially under resolved problems and can fail in the thick diffusion limit. A long list of alternative spatial discretizations, all with better physics properties: accuracy, robustness, and/or preservation of the thick diffusion limit, have been proposed as alternatives to DD. Unfortunately, these alternative spatial discretizations also require significantly more floating point operations (FLOPs) per unknown compared to DD. Historically, neutron transport problems of interest have been able to be resolved sufficiently that DD is accurate enough and FLOPs have been the computational performance bottleneck controlling time to solution. Thus, in practice DD has been and remains a preferred spatial discretization for neutron transport simulations. Trends in computing architecture are leading to a new paradigm where data movement, not FLOPs will control time to solution. This presents an opportunity to improve neutron transport physics by reconsidering more FLOP intensive spatial discretization than DD without incurring a time to solution penalty. In this work, we consider the improved simple corner balance (ISCB) spatial discretization, a unique alternative to DD that has the same memory footprint as DD, and detail efforts to improve its computational performance. The ISCB spatial discretization is a more FLOP intensive spatial discretization than DD with the same memory footprint as DD. Though designed to maximize FLOP intensity, third party libraries such as LAPACK are not tuned for the unique, frequent, small linear algebra needs of neutron transport problems. While hand coding a sparse Gauss elimination is likely to be faster than a dense matrix solve (CM vs. HGE), were LAPACK suitable for small linear algebra problems, we would not have seen a performance increase with decreased numbers of LAPACK calls for the Schur complement solve (SC4 vs. SC1). Significant effort has reduced the relative compute time of ISCB to DD, but on current computer architectures DD is still faster than ISCB. Future work comparing the overall efficiency of ISCB to DD may reveal that while ISCB is slower than DD on current computers, ISCB is more accurate than DD by a factor greater than the compute time slowdown. As new computer architectures become available, we will test our hypothesis that neutron transport simulations will be bandwidth limited, ideally rendering the additional FLOPs required by ISCB to be 'free' [in terms of time to solution]. (authors)

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Adapting In Situ Accelerators for Sparsity With Granular Matrix Reordering

Neural network (NN) inference is an essential part of modern systems and is found at the heart of numerous applications ranging from image recognition to natural language processing. In situ NN accelerators can efficiently perform NN inference using resistive crossbars, which makes them a promising solution to the data movement challenges faced by conventional architectures. Although such accelerators demonstrate significant potential for dense NNs, they often do not benefit from sparse NNs, which contain relatively few non-zero weights. Processing sparse NNs on in situ accelerators results in wasted energy to charge the entire crossbar where most elements are zeros. To address this limitation, this paper proposes Granular Matrix Reordering (GMR): a preprocessing technique that enables an energy-efficient computation of sparse NNs on in situ accelerators. GMR reorders the rows and columns of sparse weight matrices to maximize the crossbars' utilization and minimize the total number of crossbars needed to be charged. The reordering process does not rely on sparsity patterns and incurs no accuracy loss. Finally, GMR achieves an average of 28% and up to 34% reduction in energy consumption over seven pruned NNs across four different pruning methods and network architectures.

97 MATHEMATICS AND COMPUTING↗

Scaling Up Data-Parallel Analytics Platforms: Linear Algebraic Operation Cases

Linear algebraic operations such as matrix manipulations form the kernel of many machine learning and other crucial algorithms. Scaling up as well as scaling out such algorithms are key to supporting large scale data analysis that require efficient processing over millions of data samples. To this end, we present, ARION, a hardware acceleration based approach for scaling-up individual tasks of Spark, a popular data-parallel analytics platform. We support both linear algebraic operations of between two dense matrices, and between sparse and dense matrices in distributed environments. ARION provides a flexible control of acceleration according to matrix density, along with efficient scheduling based on runtime resource utilization. We demonstrate the benefit of our approach for general matrix multiplication operations over large matrices with up to four billion elements by using Gramian matrix computation that is commonly used in machine learning. Experiments show that our approach achieves more than 2× and 1.5× end-to-end performance speedups for dense and sparse matrices, respectively, and up to 57.04× faster computation compared to MLlib, a state of the art Spark-based implementation. This work is sponsored in part by the NSF under the grants: CNS-1565314, CNS-1405697, and CNS-1615411. The manuscript has been authored by UT-Battelle, LLC under Contract No. DE-AC05-00OR22725 with the U.S. Department of Energy. The United States Government retains and the publisher, by accepting the article for publication, acknowledges that the United States Government retains a non-exclusive, paid-up, irrevocable, world-wide license to publish or reproduce the published form of this manuscript, or allow others to do so, for United States Government purposes. The Department of Energy will provide public access to these results of federally sponsored research in accordance with the DOE Public Access Plan (http://energy.gov/downloads/doe-public-access-plan). This research used resources of the Oak Ridge Leadership Computing Facility at the Oak Ridge National Laboratory, which is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC05-00OR22725.

Xu, Luna↗

Toward memory-efficient melt pool monitoring: a classification framework using event-based imaging and sparse sensing technique

Vision sensors like CMOS and CCD cameras are often used for in-process monitoring of melt pools in laser-based additive and welding processes, but they require transferring large amounts of data and computational processing resources. Event-based neuromorphic imagery, on the other hand, detects only the change in pixel intensity, thus potentially reducing the data amount and latency. With an event imager, this study develops a framework for melt pool condition classification, including image construction, time scale selection, optimal pixel selection, and sparse classification, to achieve a highly memory-efficient scheme. These are based on sparse sensing techniques with singular value decomposition (SVD) and QR pivoting, the two fundamental matrix transformations for linear dimensionality reduction. The framework is then validated by classifying a controlled experiment by exciting various mode shapes of liquid gallium pools of varying depths (3, 6, and 8 mm). At 200 pixels, the classifier can reach overall accuracy of 75%, while at 2000 pixels (0.013% of the total possible pixels), the accuracy is nearly 90% (89.86%). At the same number of pixels, random selection can only achieve 46% and 67%, respectively. The memory savings of the sparsely sampled event data compared to a conventional imager is about 500 times. In addition to performance, implementation and limitations of the framework are also discussed.

42 ENGINEERING↗

Testing and signal identification for two-sample high-dimensional covariances via multi-level thresholding

The paper considers testing and signal identification for covariance matrices from two populations of marginally sub-Gaussian distributed. A multi-level thresholding procedure is proposed for testing the equality of two high-dimensional covariance matrices, which is designed to detect sparse and faint differences between the covariances. A novel -statistic composition is developed to establish the asymptotic distribution of the thresholding statistics in conjunction with the matrix blocking and the coupling techniques. It is shown that the proposed test is more powerful than the existing tests in detecting sparse and weak signals in covariances. Multiple testing procedures are constructed to discover different covariances and the sub-groups of variables with different covariance structures between the two populations. The proposed procedures are based on the multi-level thresholding test, which are able to control the false discovery proportion () with high power. Simulation experiments and a case study on the returns of the S&P 500 stocks before and after the COVID-19 pandemic are conducted to demonstrate and compare the utilities of the proposed methods.

97 MATHEMATICS AND COMPUTING↗

Accuracy and convergence properties of the fixed-stress iterative solution of two-way coupled poromechanics

Here, the paper deals with the numerical solution of Biot's equations of coupled consolidation obtained by a mixed formulation combining continuous Galerkin finite–element and multipoint flux approximation finite–volume methods. The solution algorithm relies on the recently developed fixed–stress solution scheme, in which first the flow problem and then the mechanical one are addressed iteratively. We show that the algorithm can be interpreted as a particular block triangular preconditioning strategy applied within a Richardson iteration. The key component to the success of the preconditioner is the sparse approximation to the Schur complement based on a pressure space mass matrix scaled by a weighting factor that depends element–wise on the inverse of a suitable bulk modulus. The accuracy of the method is assessed, making use of well–known analytical solutions from the literature. Numerical results demonstrate robustness and low computational cost of the fixed–stress scheme in accurately capturing the two–way coupling between deformation and pressure.

58 GEOSCIENCES↗

Structural response reconstruction using a system-equivalent singular vector basis

Here, this paper develops a novel method for reconstructing the full-field response of structural dynamic systems using sparse measurements. The singular value decomposition is applied to a frequency response matrix relating the structural response to physical loads, base motion, or modal loads. The left singular vectors form a non-physical reduced basis that can be used for response reconstruction with far fewer sensors than existing methods. The contributions of the singular vectors to measured response are termed singular-vector loads (SVLs) and are used in a regularized Bayesian framework to generate full-field response estimates and confidence intervals. The reconstruction framework is applicable to the estimation of single data records and power spectral densities from multiple records. Reconstruction is successfully performed in configurations where the number of SVLs to identify is less than, equal to, and greater than the number of sensors used for reconstruction. In a simulation featuring a seismically excited shear structure, SVL reconstruction significantly outperforms modal FRF-based reconstruction and successfully estimates full-field responses with as few as two uniaxial accelerometers. SVL reconstruction is further verified in a simulation featuring an acoustically excited cylinder. Finally, response reconstruction and uncertainty quantification are performed on an experimental structure with three shaker inputs and 27 triaxial accelerometer outputs.

42 ENGINEERING↗

Detecting False Data Injection Attacks Against Power System State Estimation With Fast Go-Decomposition Approach

State estimation is a fundamental function in modern energy management system, but its results may be vulnerable to false data injection attacks (FDIAs). FDIA is able to change the estimation results without being detected by the traditional bad data detection algorithms. In this paper, we propose an accurate and computational attractive approach for FDIA detection. In this work, we first rely on the low rank characteristic of the measurement matrix and the sparsity of the attack matrix to reformulate the FDIA detection as a matrix separation problem. Then, four algorithms that solve this problem are presented and compared, including the traditional augmented Lagrange multipliers (ALMs), double-noise-dual-problem (DNDP) ALM, the low rank matrix factorization, and the proposed new “Go Decomposition (GoDec).” Numerical simulation results show that our GoDec algorithm outperforms the other three alternatives and demonstrates a much higher computational efficiency. Furthermore, GoDec is shown to be able to handle measurement noise and applicable for large-scale attacks.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Compressed basis GMRES on high-performance graphics processing units

Krylov methods provide a fast and highly parallel numerical tool for the iterative solution of many large-scale sparse linear systems. To a large extent, the performance of practical realizations of these methods is constrained by the communication bandwidth in current computer architectures, motivating the investigation of sophisticated techniques to avoid, reduce, and/or hide the message-passing costs (in distributed platforms) and the memory accesses (in all architectures). This article leverages Ginkgo’s memory accessor in order to integrate a communication-reduction strategy into the (Krylov) GMRES solver that decouples the storage format (i.e., the data representation in memory) of the orthogonal basis from the arithmetic precision that is employed during the operations with that basis. Given that the execution time of the GMRES solver is largely determined by the memory accesses, the cost of the datatype transforms can be mostly hidden, resulting in the acceleration of the iterative step via a decrease in the volume of bits being retrieved from memory. Together with the special properties of the orthonormal basis (whose elements are all bounded by 1), this paves the road toward the aggressive customization of the storage format, which includes some floating-point as well as fixed-point formats with mild impact on the convergence of the iterative process. We develop a high-performance implementation of the “compressed basis GMRES” solver in the Ginkgo sparse linear algebra library using a large set of test problems from the SuiteSparse Matrix Collection. We demonstrate robustness and performance advantages on a modern NVIDIA V100 graphics processing unit (GPU) of up to 50% over the standard GMRES solver that stores all data in IEEE double-precision.

97 MATHEMATICS AND COMPUTING↗

An Algebraic Sparsified Nested Dissection Algorithm Using Low-Rank Approximations

Here, we propose a new algorithm for the fast solution of large, sparse, symmetric positive-definite linear systems, spaND (sparsified Nested Dissection). It is based on nested dissection, sparsification, and low-rank compression. After eliminating all interiors at a given level of the elimination tree, the algorithm sparsifies all separators corresponding to the interiors. This operation reduces the size of the separators by eliminating some degrees of freedom but without introducing any fill-in. This is done at the expense of a small and controllable approximation error. The result is an approximate factorization that can be used as an efficient preconditioner. We then perform several numerical experiments to evaluate this algorithm. We demonstrate that a version using orthogonal factorization and block-diagonal scaling takes fewer CG iterations to converge than previous similar algorithms on various kinds of problems. Furthermore, this algorithm is provably guaranteed to never break down and the matrix stays symmetric positive-definite throughout the process. We evaluate the algorithm on some large problems show it exhibits near-linear scaling. The factorization time is roughly $\mathcal{O}$(N), and the number of iterations grows slowly with N.

97 MATHEMATICS AND COMPUTING↗

A Particle-Based Conditional Sampling Scheme for the Simulation of Transport in Fractured Rock With Diffusion Into Stagnant Water and Rock Matrix

In situ experiments and field-scale characterization studies have pointed out that, in fractured crystalline media, groundwater flow is highly channelized. This implies that, at the scale of a single fracture, only part of the fracture surface area is in contact with flowing water, while the rest of in-plane water is essentially stagnant and can be accessed by solutes via molecular diffusion. Despite their importance for contaminant retention, to date, there are no numerical or analytical approaches that could be used to assess the implication of stagnant water zones on solute transport in realistic large-scale Discrete Fracture Network-based models. In this study, we present an efficient and flexible algorithm for the simulation of transport in fractured rock with diffusion into stagnant water and rock matrix. The algorithm is a generalization of a previously developed numerical framework for time domain particle tracking in sparsely fractured rock. The key of the generalization is that total time in fracture (τ f ) is first evaluated using a Monte Carlo sampling and then a second sampling is performed conditioned on τ f . The algorithm has been successfully validated against existing independent solutions and the implication of diffusion into stagnant water and secondary diffusion into the matrix has been assessed for a realistic modeling scenario. The results show that, due to diffusion into stagnant water, contaminants are more strongly retarded. This increased retention is more significant for sorbing species, as a larger number of sorption sites is accessible. A high sensitivity to the flowing channel/stagnant water zone geometry has also been observed.

54 ENVIRONMENTAL SCIENCES↗

Sparse Approximate Multifrontal Factorization with Composite Compression Methods

This article presents a fast and approximate multifrontal solver for large sparse linear systems. In a recent work by Liu et al., we showed the efficiency of a multifrontal solver leveraging the butterfly algorithm and its hierarchical matrix extension, HODBF (hierarchical off-diagonal butterfly) compression to compress large frontal matrices. The resulting multifrontal solver can attain quasi-linear computation and memory complexity when applied to sparse linear systems arising from spatial discretization of high-frequency wave equations. To further reduce the overall number of operations and especially the factorization memory usage to scale to larger problem sizes, in this article we develop a composite multifrontal solver that employs the HODBF format for large-sized fronts, a reduced-memory version of the nonhierarchical block low-rank format for medium-sized fronts, and a lossy compression format for small-sized fronts. This allows us to solve sparse linear systems of dimension up to 2.7 × larger than before and leads to a memory consumption that is reduced by 70% while ensuring the same execution time. The code is made publicly available in GitHub.

97 MATHEMATICS AND COMPUTING↗

Matrix and Array (MATAR) Library

MATAR is a C++ software library to allow developers to easily create and use dense and sparse data representations that are also portable across disparate architectures using Kokkos.

Morgan, Nathaniel↗

The 3D Lyman- α forest power spectrum from eBOSS DR16

We measure the three-dimensional power spectrum (P3D) of the transmitted flux in the Lyman-α (Ly α) forest using the complete extended Baryon Oscillation Spectroscopic Survey data release 16 (eBOSS DR16). This sample consists of ~205 000 quasar spectra in the redshift range 2 ≤ z ≤ 4 at an effective redshift z = 2.334. We propose a pair-count spectral estimator in configuration space, weighting each pair by exp( i k ∙ r), for wave vector k and pixel pair separation r, effectively measuring the anisotropic power spectrum without the need for fast Fourier transforms. This accounts for the window matrix in a tractable way, avoiding artefacts found in Fourier-transform based power spectrum estimators due to the sparse sampling transverse to the line of sight of Ly α skewers. We extensively test our pipeline on two sets of mocks: (i) idealized Gaussian random fields with a sparse sampling of Ly α skewers, and (ii) log-normal LyaCoLoRe mocks including realistic noise levels, the eBOSS survey geometry and contaminants. On eBOSS DR16 data, the Kaiser formula with a non-linear correction term obtained from hydrodynamic simulations yields a good fit to the power spectrum data in the range $(0.02 ≤ k ≤ 0.35)$ h Mpc -1 at the 1–2σ level with a covariance matrix derived from LyaCoLoRe mocks. We demonstrate a promising new approach for full-shape cosmological analyses of Ly α forest data from cosmological surveys such as eBOSS, the currently observing Dark Energy Spectroscopic Instrument and future surveys such as the Prime Focus Spectrograph, WEAVE-QSO, and 4MOST.

79 ASTRONOMY AND ASTROPHYSICS↗