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At least 271 records · Page 15

Microbial necromass in cropland soils: A global meta-analysis of management effects

Microbial necromass is a large and persistent component of soil organic carbon (SOC), especially under croplands. The effects of cropland management on microbial necromass accumulation and its contribution to SOC have been measured in individual studies but have not yet been summarized on the global scale. For this study, we conducted a meta-analysis of 481-paired measurements from cropland soils to examine the management effects on microbial necromass and identify the optimal conditions for its accumulation. Nitrogen fertilization increased total microbial necromass C by 12%, cover crops by 14%, no or reduced tillage (NT/RT) by 20%, manure by 21%, and straw amendment by 21%. Microbial necromass accumulation was independent of biochar addition. NT/RT and straw amendment increased fungal necromass and its contribution to SOC more than bacterial necromass. Manure increased bacterial necromass higher than fungal, leading to decreased ratio of fungal-to-bacterial necromass. Greater microbial necromass increases after straw amendments were common under semi-arid and in cool climates in soils with pH <8, and were proportional to the amount of straw input. In contrast, NT/RT increased microbial necromass mainly under warm and humid climates. Manure application increased microbial necromass irrespective of soil properties and climate. Management effects were especially strong when applied during medium (3–10 years) to long (10+ years) periods to soils with larger initial SOC contents, but were absent in sandy soils. Close positive links between microbial biomass, necromass and SOC indicate the important role of stabilized microbial products for C accrual. Microbial necromass contribution to SOC increment (accumulation efficiency) under NT/RT, cover crops, manure and straw amendment ranged from 45% to 52%, which was 9%–16% larger than under N fertilization. In summary, long-term cropland management increases SOC by enhancing microbial necromass accumulation, and optimizing microbial necromass accumulation and its contribution to SOC sequestration requires site-specific management.

59 BASIC BIOLOGICAL SCIENCES↗

Assessment of Spoilage Microbiota of Rainbow Trout (Oncorhynchus mykiss) during Storage by 16S rDNA Sequencing

Due to the high contents of protein and fat in rainbow trout, it is highly susceptible to spoilage, which limits the storage and transportation processes. Exploring the spoilage microbial community during rainbow trout storage is essential to develop an effective preservation method. Here, the changes in the total bacterial colony and total volatile base nitrogen (TVB-N) during the storage of rainbow trout were investigated. Storage at 0 °C can effectively slow down the spoilage process with bacterial counts and TVB-N contents decreased from 8.7 log CFU/g and 18.7 mg/100 g obtained at 4 °C to 5.6 log CFU/g and 14.5 mg/100 g, respectively. 16S rDNA high-throughput sequencing results showed that the diversity of microbial genera decreased during storage. Acinetobacter, Pseudomonas, and Shewanells gradually became the dominant spoilage genera with contents of 59.9%, 18.6%, and 1.7%, respectively, in the late stage of storage. The spoilage abilities of bacteria belonging to the Pseudomonas and Shewanells genera were analyzed. Shewanella sp. S5-52 showed the highest level of TVB-N content (100.6 mg/100 g) in sterile fish juice, indicating that it had a strong spoilage ability. This study confirmed the dominant spoilage bacterial genera and evaluated the spoilage abilities of isolated strains during the storage of rainbow trout, which laid the foundation for further investigation of the spoilage mechanism of rainbow trout and other aquatic products.

Du, Guangqing↗

Raw Data published in PeerJ, 2021 for Crested Butte decomposition field study 2017-2019.

This data package contains text files that describe geochemical measurements collected from 2017-2019 during isolated conifer needle decomposition field studies in Crested Butte, Colorado. The geochemical measurements were collected across three elevations (2,800–3,500 m) ranging from montane to subalpine ecoregions. The data sets within include total carbon and nitrogen content and fourier-transform infrared spectroscopy (FTIR) results for the initial needles collected in 2016 and after decomposition in 2019. Data collection results from August 2020 are also included from when the experimental plots were removed to understand final concentrations of soil extractable carbon and nitrogen content as well as mass balances from litter bag deployments. Soil porewater results are also provided from 2017-2019 for DOC, TN, UV254, and specific UV absorbance (SUVA) analyses at 15 cm soil depth. Gas flux raw data provides CO2, CH4, N2O, and NH3 measurements above needle decomposition over the three study years. Finally, soil samples for microbial DNA extractions were collected from the upper soil depth. This raw data is available in the NCBI SRA database under SRA accession numbers PRJNA605259 and PRJNA715914. These data sets were generated to investigate the isolated decomposition of spruce and lodgepole conifer needles. The goal of this work was to determine the roles of elevation, soil type, seasonal changes in soil moisture, and snowmelt timing on litter decomposition processes. Results from this work are detailed in the reference paper "Effect of elevation, season and accelerated snowmelt on biogeochemical processes during isolated conifer needle litter decomposition. DOI: 10.7717/peerj.11926."

54 ENVIRONMENTAL SCIENCES↗

Topography and canopy cover influence soil organic carbon composition and distribution across a forested hillslope in the discontinuous permafrost zone

This dataset contains data used for the paper "Topography and canopy cover influence soil organic carbon composition and distribution across a forested hillslope in the discontinuous permafrost zone". The Related References field will be updated with a full citation when available. Topography and canopy cover influence ground temperature in warming permafrost landscapes, yet soil temperature heterogeneity introduced by meso-topographic slope positions, microtopographic differences in vegetation cover, and the subsequent impact of contrasting temperature conditions to soil organic carbon (SOC) dynamics are understudied. Buffering of permafrost-affected soils against warming air temperatures in boreal forests can reflect surface soil characteristics (e.g., thickness of organic material) as well as the degree and type of canopy cover (e.g., open cover vs closed cover). Both landscape and soil properties interact to determine meso- and micro-scale heterogeneity of ground warming. We sampled a hillslope catena transect in a discontinuous permafrost zone near Fairbanks, Alaska to test the small-scale (1 to 3 meter) impacts of slope position and cover type on soil organic matter composition. Mineral active layer samples were collected from backslope, low backslope, and footslope positions at depths spanning 19 to 60 cm. We examined soil mineralogical composition, soil moisture, total carbon and nitrogen content, and organic mat thickness in conjunction with an assessment of SOC composition using Fourier-transform ion Cyclotron Resonance Mass Spectrometry (FT-ICR-MS). Soils in the footslope position had a higher relative contribution of lignin-like compounds while backslope soils had more aliphatic and condensed aromatic compounds as determined by FT-ICR-MS. The effect of open versus closed tree canopy cover varied with slope position. On the backslope, we found higher oxidation of molecules under open cover compared with closed cover, indicating an effect of warmer soil temperature on decomposition. Little to no effect of canopy was observed for soils at the footslope position, which we attributed, in part, to the strong impact of soil moisture content in SOC dynamics in the water-gathering footslope position. The thin organic mat under open cover on the backslope position may have contributed to differences in soil temperature and thus SOC oxidation under open and closed canopy. Here, the thinner organic mat did not appear to buffer the underlying soil against warm season air temperatures and thus increased SOC decomposition as indicated by higher oxidation of SOC molecules and a lower contribution of simple molecules under open cover compared with the closed canopy sites. Our findings suggest that the role of canopy cover in SOC dynamics varies as a function of landscape position and soil properties, namely organic mat thickness and soil moisture. Condition-specific heterogeneity of SOC composition under open and closed canopy cover highlights the protective effect of canopy cover for soils on backslope positions. This dataset contains a compressed (.zip) archive of the data and R scripts used for this manuscript. The dataset includes files in .csv format, which can be accessed and processed using MS Excel or R. This archive can also be accessed on GitHub at https://github.com/Erin-Rooney/Y1_fairbanks (DOI: 10.5281/zenodo.8071247).

54 ENVIRONMENTAL SCIENCES↗

Reproductive and leaf litterfall fluxes in forest ecosystem sites globally (1950-2022)

Forest allocation of net primary productivity (NPP) to reproduction is poorly quantified globally, despite its critical role in forest regeneration and a well-supported trade-off with allocation to growth. Although field measurements of total NPP are rare, our work finds that a proxy for reproductive carbon allocation constructed from leaf (L) and reproductive (R) litterfall fluxes, R/(R+L), is strongly correlated with R/NPP, facilitating analysis across a wide range of sites where biometric estimates of NPP are not available (R² = 0.85; Hanbury-Brown et al., 2022, Ward et al., in prep). To investigate relationships between ecosystem-scale reproductive allocation (RA) and climate, soil fertility, and stand age gradients, we conducted a literature search and synthesized 824 observations of annual average leaf and reproductive litterfall fluxes across forest sites globally. The zip file includes 1) a folder Data/ containing the litterfall data ("GlobalForestRA_data.csv") and metadata ("GlobalForestRA_metadata.doc") files. The data file includes geographic coordinates, long-term mean annual temperature and precipitation (1970-2000, extracted from WorldClim2.1), leaf and reproductive litterfall fluxes, sampling interval and protocols, forest characteristics (dominant leaf morphology, information pertaining to forest age and successional stage, and disturbance history) and soil properties (% sand, %silt, %clay, total phosphorus (P), nitrogen (N), cation exchange capacity (CEC) and pH) extracted from SoilGrids250 and from on-site measurements, where available. The metadata file contains information about each variable reported in the data file, including data sources, processing methods, and all references. The Data folder contains two additional files used to create Figure 1; these are described in greater detail in the README.2) R scripts GloalForestRA_analysis.r and GlobalForestRA_SI.r and a folder /Functions used to produce results, figures, and tables in the manuscript Ward et al. (in press)3) a README file describing how the data and R scripts can be used to reproduce statistical results, figures, and tables found in the manuscript. Ward et al. (in press)This repository can also be found at: https://github.com/r-ward/Global_Analysis_ForestRA.Ward, R.E., Zhang-Zheng, H. Aernethy, K., Adu-Bredu, S., Arroyo, L., Bailey, A. et al. (in press). Forest age rivals climate to explain reproductive allocation patterns in forest ecosystems globally. Ecology Letters. Hanbury-Brown, A.R., Ward, R.E. & Kueppers, L.M. (2022). Forest regeneration within Earth system models: current process representations and ways forward. New Phytol., 235, 20–40.Ward et al. (2025), Forest age rivals climate to explain reproductive allocation patterns in forest ecosystems globally, in prep.

54 ENVIRONMENTAL SCIENCES↗

Carbon chemistry of Luna 16 and Luna 20 samples.

Luna 16 and Luna 20 samples were analyzed for volatilizable species using vacuum pyrolysis to 1400 C. The major gaseous products evolved (ranging from 10-650 micrograms/g) were H2O, CO, CO2, N2 and CH4. Minor components (all less than 10 micrograms/g) included NH3, HCN, NO, SO2, H2S, C2H2, C2H4, C2H6, C3H6 and higher hydrocarbons, benzene, toluene, and the polymeric contaminants Teflon and silicone oil. The total carbon and nitrogen contents (micrograms/g) for these sieved samples were: Luna 16 - C 418, N 134 and Luna 20 - C 380, N 80.

Simoneit, B. R.↗

Gaseous exhaust emissions from a J-58 engine at simulated supersonic flight conditions

Emissions of total oxides of nitrogen, unburned hydrocarbons, carbon monoxide, and carbon dioxide from a J-58 engine at simulated flight conditions of Mach 2.0, 2.4, and 2.8 at 19.8 km altitude are reported. For each flight condition, measurements were made for four engine power levels from maximum power without afterburning through maximum afterburning. These measurements were made 7 cm downstream of the engine primary nozzle using a single point traversing gas sample probe. Results show that emissions vary with flight speed, engine power level, and with radial position across the exhaust.

Holdeman, J. D.↗

Emission calibration of a J-58 afterburning turbojet engine at simulated supersonic stratospheric flight conditions

Emissions of total oxides of nitrogen, unburned hydrocarbons, and carbon monoxide from a J-58 engine at simulated flight conditions of Mach 2.0, 2.4, and 2.8 at 19.8 km altitude are reported. For each flight condition, measurements were made for four engine power levels from maximum power without afterburning through maximum afterburning. These measurements were made 7 cm downstream of the engine primary nozzle using a single point traversing gas sample probe. Results show that emissions vary with flight speed, engine power level, and with radial position across the exhaust.

Holdeman, J. D.↗

Emission calibration of a J-58 afterburning turbojet engine at simulated supersonic, stratospheric flight conditions

Emissions of total oxides of nitrogen, unburned hydrocarbons, and carbon monoxide from a J-58 engine at simulated flight conditions of Mach 2.0, 2.4, and 2.8 at 19.8 km altitude are reported. For each flight condition, measurements were made for four engine power levels from maximum power without afterburning through maximum afterburning. These measurements were made 7 cm downstream of the engine primary nozzle using a single point traversing gas sample probe. Results show that emissions vary with flight speed, engine power level, and with radial position across the exhaust.

Holdeman, J. D.↗

Measurement of exhaust emissions from two J-58 engines at simulated supersonic cruise flight conditions

Emissions of total oxides of nitrogen, unburned hydrocarbons, carbon monoxide, and carbon dioxide from two J-58 afterburning turbojet engines at simulated high-altitude flight conditions are reported. Test conditions included flight speeds from Mach 2 to 3 at altitudes from 16 to 23 km. For each flight condition, exhaust measurements were made for four or five power levels from maximum power without afterburning through maximum afterburning. The data show that exhaust emissions vary with flight speed, altitude, power level, and radial position across the exhaust. Oxides of nitrogen (NOX) emissions decreased with increasing altitude, and increased with increasing flight speed. NOX emission indices with afterburning were less than half the value without afterburning. Carbon monoxide and hydrocarbon emissions increased with increasing altitude, and decreased with increasing flight speed. Emissions of these species were substantially higher with afterburning than without.

Holdeman, J. D.↗

Exhaust emission calibration of two J-58 afterburning turbojet engines at simulated high-altitude, supersonic flight conditions

Emissions of total oxides of nitrogen, nitric oxide, unburned hydrocarbons, carbon monoxide, and carbon dioxide from two J-58 afterburning turbojet engines at simulated high-altitude flight conditions are reported. Test conditions included flight speeds from Mach 2 to 3 at altitudes from 16.0 to 23.5 km. For each flight condition exhaust measurements were made for four or five power levels, from maximum power without afterburning through maximum afterburning. The data show that exhaust emissions vary with flight speed, altitude, power level, and radial position across the exhaust. Oxides of nitrogen emissions decreased with increasing altitude and increased with increasing flight speed. Oxides of nitrogen emission indices with afterburning were less than half the value without afterburning. Carbon monoxide and hydrocarbon emissions increased with increasing altitude and decreased with increasing flight speed. Emissions of these species were substantially higher with afterburning than without.

Holdeman, J. D.↗

Geochemistry of biomolecules

A highly sensitive fluorometric technique is developed for the determination of biological and geo-organic compounds in ancient sediments and extraterrestrial samples. This technique is used to establish chemical evidence for fossil pigments in an extraterrestrial sample. Also developed is a highly sensitive and specific fluorometric method for the determination of total primary amine nitrogen in soil samples.

Bonner, J.↗

Experimental study of the C/3P/ + N/4S/ + M yields CN/B 2Sigma+/ + M recombination

The kinetics of the CN violet band emission produced by the reaction of nitrogen with cynogen is investigated as a function of the densities of atomic carbon and atomic nitrogen and of total pressure. It is shown that CN is formed in a three-body recombination reaction from C and N atoms. The reactions studied have relevance to investigations of the chemistry of interstellar molecules.

Washida, N.↗

Measurement of exhaust emissions from two J-58 engines at simulated supersonic cruise flight conditions

Emissions of total oxides of nitrogen, unburned hydrocarbons, carbon monoxide, and carbon dioxide from two J-58 afterburning turbojet engines at simulated high-altitude flight conditions are reported. Test conditions included flight speeds from Mach 2 to 3 at altitudes from 16 to 23 km. For each flight condition, exhaust measurements were made for four or five power levels from maximum power without afterburning through maximum afterburning. The data show that exhaust emissions vary with flight speed, altitude, power level, and radial position across the exhaust. Oxides of nitrogen emissions decreased with increasing altitude and increased with increasing flight speed. NO(x) emission indices with afterburning were less than half the value without afterburning. Carbon monoxide and hydrocarbon emissions increased with increasing altitude and decreased with increasing flight speed. Emissions of these species were substantially higher with afterburning than without.

Holdeman, J. D.↗

Exhaust emission survey of an F100 afterburning turbofan engine at simulated altitude flight conditions

Emissions of carbon monoxide, total oxides of nitrogen, unburned hydrocarbons, and carbon dioxide from an F100, afterburning, two spool turbofan engine at simulated flight conditions are reported. For each flight condition emission measurements were made for two or three power levels from intermediate power (nonafterburning) through maximum afterburning. The data showed that emissions vary with flight speed, altitude, power level, and radial position across the nozzle. Carbon monoxide emissions were low for intermediate power (nonafterburning) and partial afterburning, but regions of high carbon monoxide were present downstream of the flame holder at maximum afterburning. Unburned hydrocarbon emissions were low for most of the simulated flight conditions. The local NOX concentrations and their variability with power level increased with increasing flight Mach number at constant altitude, and decreased with increasing altitude at constant Mach number. Carbon dioxide emissions were proportional to local fuel air ratio for all conditions.

Moss, J. E.↗

Exhaust emissions survey of a turbofan engine for flame holder swirl type augmentors at simulated altitude flight conditions

Emissions of carbon dioxide, total oxides of nitrogen, unburned hydrocarbons, and carbon monoxide from an F100 afterburning two spool turbofan engine at simulated flight conditions are reported. Tests were run at Mach 0.8 at altitudes of 10.97 and 13.71 km (36,000 and 45,000 ft), and at Mach 1.2 at 13.71 km (45,000 ft). Emission measurements were made from intermediate power (nonafterburning) through maximum afterburning, using a single point gas sample probe traversed across the horizontal diameter of the exhaust nozzle. The data show that emissions vary with flight speed, altitude, power level, and radial position across the nozzle. Carbon monoxide emissions were low for intermediate and partial afterburning power. Unburned hydrocarbons were near zero for most of the simulated flight conditions. At maximum afterburning, there were regions of NOx deficiency in regions of high CO. The results suggest that the low NOx levels observed in the tests are a result of interaction with high CO in the thermal converter. CO2 emissions were proportional to local fuel air ratio for all test conditions.

Moss, J. E., Jr.↗

Evidence for diabatic cooling and poleward transport within and around the 1987 Antarctic ozone hole

Atmospheric dynamics at altitudes of 17.5-19 km were analyzed using measurements of N2O, total water, total odd-nitrogen species, and potential vorticity (derived from pressures, temperatures, and wind speeds) obtained aboard the ER-2 aircraft flown in the period between August 23 and September 22 during the Airborne Antarctic Ozone Experiment. Results indicated a consistent gradual poleward movement of air, extending from about 10 deg in latitude outside the boundary of the ozone hole to about 5 deg inside. Evidence is presented of ongoing diabatic cooling throughout this zone, both inside and outside the chemically perturbed region.

Profitt, M. H.↗

Airborne Measurements of NO, NO2, and NO(y) as Related to NASA's Pacific Exploratory Mission

The Tropospheric Trace Gas and Airborne Measurements Group's (TTGAMG) efforts on NASA GTE (Global Tropospheric Experiment) PEM (Pacific Exploratory Mission) West A & B field campaign primarily involved the acquisition of NO, NO2 and NO(y) measurements, as well as the subsequent analysis and interpretation of the data base obtained during the PEM West field campaign. These investigations focused on the distribution of trace gases, sources and sinks of ozone, ozone producing precursors with a heavy emphasize on ozone's photochemical state, and the partitioning of the molecules within the NO(y) family over the north western Pacific Ocean. The two components of PEM West were focused on observing air masses as they reached the Asian Continent (PEM West A) or as the air mass departed the Asian Continent (PEM West B). NO(x) concentrations play a pivotal role in controlling the photochemical lifetime of ozone in these environments, and understanding the NO(x) species partitioning is paramount. The transport of NO(x) into the regions, in the form of longer lived NO(y) family members, was examined in relation to the comparison of natural occurring sources of NO(x) (i.e., lightning and stratosphere/troposphere exchange) to those produced as a result of anthropogenic activity (i.e., biomass burning and aircraft emissions). The TTGAMG's measurements of NOx and NO(y), in conjunction with other investigators' measurements of PAN (H. B. Singh's group) and HNO3 (R. W. Talbot's group), have been used to assess the total reactive odd nitrogen levels over the study regions, the partitioning of the reactive odd nitrogen species in their various forms, and the usefulness of the NO, measurement and its measurement technique. The TTGAMG's primary PEM West objectives were the characterization of the factors controlling the distribution and fate of reactive odd nitrogen compounds over the western Pacific Ocean and an analysis of the concentration of various trace gases in the troposphere as the air mass aged by both dynamical mixing and photochemical processes in the troposphere.

Sandholm, Scott↗