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DOE OSTI2021

Simulation Studies on the Interactions of Electron Beam with Wastewater

The manufactured chemical pollutants, like 1,4 dioxane and PFAS (per- and polyfluroralkyl substances), found in the underground water and/or drinking water are challenging to be removed or biodegraded. Energetic electrons are capable of mediating and removing them. This paper utilizes FLUKA code to evaluate the beam-wastewater interaction effects with different energy, space and divergence distributions of the electron beam. With 8 MeV average energy, the electron beam exits from a 0.0127 cm thick titanium window, travels through a 4.3 cm distance air and a second 0.0127 cm thick stainless water container window with 2.43 cm radius, and finally is injected into the water area, where the volume of water is around 75 cubic cm. The distribution parameters of the electron beam are from the GPT (General Particle Tracer) simulations for UITF (Upgraded Injector Test Facility) in Jefferson lab. By varying the distributions, several measurements including the dose (or energy deposition) distribution, electron fluence, photon fluence are scored and compared. Taking the comparisons into consideration, this paper is aiming to find better electron beams for the wastewater irradiation.

Li, X.↗

DOE OSTI2021

Manipulating magnetism and excitonic states in quasi-two-dimensional electron systems

Building upon our experience in studying the influences of geometric phase and interaction effects on electronic properties, we have performed theoretical research on the manipulation of magnetic and excitonic degrees of freedom in some two-dimensional and quasi two-dimensional systems.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

DOE OSTI2021

Spot Size Optimization of the Scorpius Accelerator

The Scorpius Linear Induction Accelerator (LIA) is being developed by the Advanced Sources and Diagnostics (ASD) Project and will complement other U1a capabilities by providing a multi-pulse, DARHT-class, flash-radiography capability. Commissioning activities are expected to end in Spring of 2026. All of the diagnostics discussed in this chapter are relevant to LIAs that generate high-current relativistic electron beams, and some diagnostics will also be relevant to other accelerators. The Scorpius Accelerator will be the world’s most advance LIA. Although significant technological advancements have been incorporated throughout the machine, many performance aspects of Scorpius will be similar to those of FXR and DARHT Axis-I and -II. These LIAs offer the same challenges, whether it is suppressing beam instabilities, improving diagnostic accuracy, validating computer simulations and beam tunes, or reducing beam-target interaction effects. However, the ultimate figure of merit is consistent between these LIAs, which is spot size and dose.

43 PARTICLE ACCELERATORS↗

DOE OSTI2022

Ellipsoidal Fitting Methodology for Defect Clusters in Gallium Arsenide

In assessing the initial spatial distribution of defects from neutron or heavy ion irradiation, it is useful to have a reliable, automated, and fast-running tool to evaluate characteristic metrics such as the number of sub-clusters or the overall cluster volume. The latter metric, for instance, can be utilized to estimate a reference neutron fluence level at which inter-cluster interaction effects begin to become significant. This paper details a methodology to fit an arbitrarily complex defect map with a set of ellipsoids (one per identified sub-cluster) in which the constituent defects of a sub-cluster are determined using fuzzy degree-of-membership analysis. Specifically, a parameterized model is developed for point defects in gallium arsenide. Cluster volume calculations based on the model are compared against convex hull and single- ellipsoid representations. Results show that the parameterized sub-cluster model begins to deviate from the two reference models at a recoil energy of about 100 keV in GaAs, with the convex hull and single-ellipsoid representations increasingly overestimating the volume thereafter.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2021

Simulation Studies on the Interactions of Electron Beam with Wastewater

Li, X.↗

DOE OSTI2024

Predictive Indicators of the Performance of Large Language Models

In several mission contexts, it is desirable to estimate the performance of large language models (LLMs) on tasks that we cannot run directly. In light of published “scaling laws” our hypothesis is that some tasks should be consistently more challenging than others based on characteristics of the task. The goal of this project was to begin quantifying how much information about LLM performance can be gained from the features of a model and a task. Two of our statistical models struggled to converge. Pass/fail test results may provide limited information for inference beyond model quality and task difficulty, but we see no evidence at this time for significant feature interaction effect sizes, arguing for simple models. Future work extending the models to capitalize on perplexity of ground truth answers is suggested. This project also introduces “Depth of Knowledge Variant Testing” as a strategy for more finely assessing language models on open domain question and answer tasks. We developed sets of questions that ask a language model to produce similar information while demonstrating increasing depth of knowledge, and also relabeled existing Q&A test questions with their depth of knowledge. Our results suggest further consideration of Bloom’s taxonomy and further refinement of prompts to properly elicit information at varying depths. In the course of this work, we set up a basic infrastructure for standardizing tasks and testing many language models on these tasks. In addition to testing the predictive quality of model features and performance across test suites, with this project we have introduced two new task features to contextualize each test question: the Dewey Classification main category of information covered, and the Bloom’s taxonomy level that corresponds to the depth of knowledge probed by the question. Splits across these and other features produced over five hundred task subtypes with distinct feature vectors, which we tested on half a dozen models.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2026

From viruses to protists: temperature response of the neglected components of microbial controls on peatland nutrient cycling

The response of plant-associated microbial communities to rising temperatures likely plays a key role in global Carbon (C) and Nitrogen (N) biogeochemical cycles. Mosses of the genus Sphagnum, in particular, sequester 25% of all terrestrial C as recalcitrant peat. However, their ability to sequester C is mediated by interactions with microbes that fix N and pass it to the moss to grow in otherwise oligotrophic systems. Two important biotic controls on this processes are likely to respond to rising temperatures –predation by protists and infections by viruses– but whether and how this might occur is not well understood. This proposal addressed these questions using a combination of genomics and mathematical modeling with both field data from whole-ecosystem warming experiments, and laboratory-based microcosm experiments. We have discovered 1) mechanistic links between cell traits and thermal performance in protists, which 2) enabled predictions from populations to ecosystems, 3) we have identified eco-phenotypic feedbacks that determine protist–bacterial predator–prey dynamics, 4) have documented concomitant compositional and trait shifts in protist communities with warming in the field, 5) revealed consistent interactive effects of temperature and nutrients on bacterial and protist communities; 6) characterized the Sphagnum virome, and 7) made modeling predictions on its implications for thermal responses of microbial communities in peatlands globally. This award also substantially strengthened U.S. scientific capacity and workforce development.

Gibert, Jean Philippe [Duke University]↗

DOE OSTI2025

Interaction of HOMs in periodic accelerating structures

The paper discusses the HOM interaction effect in a 5-cell 650 MHz HB cavity prototype for the PIP-II project. This effect may lead to flat HOM passbands. In the presence of misalignments, this passband disintegrates into individual cell resonances that are not coupled to the beam pipes and, therefore, have a high-quality factor and R/Q ratio. These resonances can lead to excessive cryogenic loading, increased emittance, and beam instabilities. An analytical theory has been developed to explain this effect, as well as special methods for eliminating it.

Yakovlev, V. [Fermilab]↗

DOE OSTI2024

Differential Organic Carbon Mineralization Responses to Soil Moisture in Three Different Soil Orders Under Mixed Forested System: Supporting Data

This data contains data from 90-day long incubation study which aimed to look at the soil moisture-texture relationship on soil organic carbon (SOC) cycling. Soils were collected from three distinct soil textures from mixed forests in 2017: sandy (Georgia, 2017-05-01), loamy (Missouri, 2017-06-14) and clayey (Texas, December 2017) were incubated at different soil moisture levels (air-dried, 25% water holding capacity (WHC), 50% WHC, 100% WHC and 175% WHC) at room temperature for a period of 90 days. Files contain microbial respiration, active and slow SOC pools, and their respective mineralization rates, extractable organic carbon (C), and C-acquiring extracellular enzymes. Findings from these data were used in Singh et al. (2021). This study aimed to examine the interactive effect of soil moisture and texture on SOC mineralization. Soil samples of three distinct textures (sandy, loamy, and clayey) were collected from mixed forests of Georgia, Missouri, and Texas, respectively. Soil cores of 5 cm diameter were collected from numerous random locations at each site from 0-15 cm depth after scraping the litter layer and mixed thoroughly to obtain a composite sample per site. Three additional soil cores were collected to determine the WHC using pressure plate extractors. Soil samples were composited, and triplicate soil samples were incubated in mason jars for a period of 90 days at room temperature under different moisture regimes: air dried, 25% WHC, 50% WHC, at WHC and 100% saturation. Soil respiration was measured weekly, and destructive sampling was conducted at 1, 15, 60, and 90 days to determine extractable organic C, C acquiring enzyme activity, and active and slow SOC pools with their respective mineralization rates. The C acquiring enzyme activity was the total activity of α-glucosidase, β-glucosidase, cellobiohydrolase, and β-xylosidase enzymes. Gas samples for microbial respiration measurements were collected from headspace of incubation jars through the sampling ports on the lids and then analyzed using a Shimadzu Gas Chromatograph (GC-2014). Prior to sampling, the vials were evacuated. Blank correction was also done by collecting gas samples from empty incubation jars. Double pool exponential decay model was used in SigmaPlot to determine the active and slow SOC pools and their mineralization rates (Farrar et al., 2012; Jagadamma et al., 2014). The C-acquiring extracellular enzymes were measured using the microplate method by German et al., (2011). Microbial community structure was determined using the phospholipid fatty acid (PLFA) and neutral lipid fatty acid (NLFA) analyses (Buyer and Sasser, 2012). This dataset has seven data files provided in comma-separate (*.csv) format. Additional metadata are provided: seven data dictionaries and a file-level metadata file in comma separate (*.csv) format and a user guide in PDF (*.pdf) format.

Carbon acquiring enzyme activity↗

DOE OSTI2022

Dissecting the Genetic Architecture of Carbon Partitioning in Sorghum Using Multiscale Phenotypes

Carbon partitioning in plants may be viewed as a dynamic process composed of the many interactions between sources and sinks. The accumulation and distribution of fixed carbon is not dictated simply by the sink strength and number but is dependent upon the source, pathways, and interactions of the system. As such, the study of carbon partitioning through perturbations to the system or through focus on individual traits may fail to produce actionable developments or a comprehensive understanding of the mechanisms underlying this complex process. Using the recently published sorghum carbon-partitioning panel, we collected both macroscale phenotypic characteristics such as plant height, above-ground biomass, and dry weight along with microscale compositional traits to deconvolute the carbon-partitioning pathways in this multipurpose crop. Multivariate analyses of traits resulted in the identification of numerous loci associated with several distinct carbon-partitioning traits, which putatively regulate sugar content, manganese homeostasis, and nitrate transportation. Using a multivariate adaptive shrinkage approach, we identified several loci associated with multiple traits suggesting that pleiotropic and/or interactive effects may positively influence multiple carbon-partitioning traits, or these overlaps may represent molecular switches mediating basal carbon allocating or partitioning networks. Conversely, we also identify a carbon tradeoff where reduced lignin content is associated with increased sugar content. The results presented here support previous studies demonstrating the convoluted nature of carbon partitioning in sorghum and emphasize the importance of taking a holistic approach to the study of carbon partitioning by utilizing multiscale phenotypes.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2020

Data from: Switchgrass rhizosphere metabolite chemistry driven by nitrogen availability

Plants and soil microorganisms interact closely in the rhizosphere where plants may exchange carbon (C) for functional benefits from the microbial community. For example, the bioenergy crop, switchgrass (Panicum virgatum) is thought to exchange root-exuded C for nitrogen (N) fixed by diazotrophs (free-living N-fixers). However, this interaction is not well characterized and it is not known how or if switchgrass responds to diazotrophs or their activity. To explore this question, we assessed rhizosphere metabolite chemistry of switchgrass grown in a hydroponic system under two N levels and under inoculated or uninoculated conditions. Plants were grown with the inoculum Azotobacter vinelandii DJ for three days before harvest. We found switchgrass root exudate chemistry to be driven by N availability. Total metabolite concentrations were generally greater under high N versus low N and unaffected by inoculation. Examination of rhizosphere chemical fingerprints indicates metabolite chemistry was also driven strongly by N availability with a greater relative abundance of carbohydrates under high N and greater relative abundance of organic acids under low N. We also found evidence of changes in rhizosphere chemical fingerprints by inoculation treatment. However, we found little evidence of N treatment and inoculation interaction effects which suggests this response is not directly mediated by N availability.

09 BIOMASS FUELS↗

DOE OSTI2025

RTN-107: The Rubin Observatory Target-of-Opportunity Mock Data Challenge

We describe the activities of the Target-of-Opportunity mock data challenge, taking place from Sep 22 2025 - Oct 18 2025. We center this activity in four questions that are critical for maximizing the scientific output of the ToO system: (1) How quickly can Rubin Observatory start observing after a ToO alert is received? (2) How efficient is Rubin Observatory at recovering the host of a ToO event? (3) How accurate are the observing strategies that the community has created for the ToO program? (4) How can expert ToO scientists interact effectively with the ToO system, where many processes are fully automated? In this challenge, and the report summarized herein, we aim to answer the aforementioned questions to better the Rubin ToO program.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2020

Superconductivity in a doped valley coherent insulator in magic angle graphene: Goldstone-mediated pairing and Kohn-Luttinger mechanism

We consider magic angle graphene in the doping regime around charge neutrality and study the connection between a recently proposed inter-valley coherent insulator at zero doping and the neighboring superconducting domes. The breaking of the valley U(1) symmetry leads to massless Goldstone modes, which couple to the doped charge carriers. We derive the effective interaction between these Goldstone modes and the conduction electrons and study its role in mediating superconductivity. Combining it with the screened Coulomb potential, we find weak-coupling superconducting instabilities in the two-component p- and d-wave channels. The competition between the two channels is set by the distance between the bilayer graphene device and the metallic gates. We find that the p-wave instability originates from the attraction mediated by the Goldstone modes, while the d-wave pairing is caused purely by the screened Coulomb interaction, similarly to the Kohn-Luttinger mechanism.

Kozii, Vladyslav↗

DOE OSTI2021

ExaWind: Exascale Predictive Wind Plant Flow Physics Modeling

The scientific goal of the ExaWind project is to advance our fundamental understanding of the flow physics governing whole wind plant performance, including wake formation, complex terrain impacts, and turbine-turbine-interaction effects. The primary application codes in the ExaWind environment are Nalu-Wind, an unstructured-grid computational fluid dynamics (CFD) code, AMR-Wind, a structured-grid CFD code, and OpenFAST, a whole-turbine simulation code. In this poster we present our progress towards simulating the ExaWind challenge problem, which is a predictive simulation of a wind farm with tens of megawatt-scale wind turbines dispersed over an area of 50 square kilometers.

49 EE - Wind and Water Power Program - Wind (EE-4W↗

DOE OSTI2023

ExaWind: Then and Now

The scientific goal of the ExaWind project is to advance our fundamental understanding of the flow physics governing whole wind plant performance, including wake formation, complex terrain impacts, and turbine-turbine-interaction effects. The primary application codes in the ExaWind environment are Nalu-Wind, an unstructured-grid computational fluid dynamics (CFD) code, AMR-Wind, a structured-grid CFD code, and OpenFAST, a whole-turbine simulation code. In this poster we present the current status of the ExaWind software stack in the context of the modeling and simulation capabilities when the project started in 2016.

computational fluid dynamics↗

DOE OSTI2021

Neutron Structure Functions at Large Bjorken X

The E12-10-002 (F2) experiment ran in Hall C at JLab to extract the F2 structure functions of proton and neutron from inclusive H(e, e0) and D(e, e0) reactions in the high Bjorken x region. Those extractions put constraints on the Parton Distribution Functions PDFs (especially at large Bjorken x), and facilitate the study of Quark Hadron Duality. The F2 experiment measurements covers a large kinematic range in x from 0.2 to 1.0, and in Q2 from 4 to 16 GeV2 . While the proton F2 structure function has been studied extensively through inelastic electron-proton scattering, much less is known about neutron structure due to the unavailability of high density, free neutron targets. The BONuS12 experiment was proposed to measure the neutron F2 on a nearly free neutron within a weakly bound deuteron target via the spectator tagging method. Tagging the slow backward moving spectator protons minimizes both off-shell and final-state interaction effects, and the measured proton momentum is used to correct for the initial-state momentum of the struck neutron. The recoil detector is used to detect spectator protons with momenta 70 < ps < 150 MeV/c. This dissertation outlines the design, construction and testing of the recoil detector, Radial Time Projection Chamber (RTPC) and discusses the results of the H(e, e0) and D(e, e0) cross sections and the F2 structure functions obtained from the Hall C F2 data analysis.

Nadeeshani, Sooriyaarachchilage↗

DOE OSTI2023

Effect of Dipole Interactions on Blocking Temperature and Relaxation Dynamics of Superparamagnetic Iron-Oxide (Fe 3 O 4 ) Nanoparticle Systems

The effects of dipole interactions on magnetic nanoparticle magnetization and relaxation dynamics were investigated using five nanoparticle (NP) systems with different surfactants, carrier liquids, size distributions, inter-particle spacing, and NP confinement. Dipole interactions were found to play a crucial role in modifying the blocking temperature behavior of the superparamagnetic nanoparticles, where stronger interactions were found to increase the blocking temperatures. Consequently, the blocking temperature of a densely packed nanoparticle system with stronger dipolar interactions was found to be substantially higher than those of the discrete nanoparticle systems. The frequencies of the dominant relaxation mechanisms were determined by magnetic susceptibility measurements in the frequency range of 100 Hz–7 GHz. The loss mechanisms were identified in terms of Brownian relaxation (1 kHz–10 kHz) and gyromagnetic resonance of Fe 3 O 4 (~1.12 GHz). It was observed that the microwave absorption of the Fe 3 O 4 nanoparticles depend on the local environment surrounding the NPs, as well as the long-range dipole–dipole interactions. These significant findings will be profoundly important in magnetic hyperthermia medical therapeutics and energy applications.

36 MATERIALS SCIENCE↗

DOE OSTI2024

Constraints On Covariant WIMP-Nucleon Effective Field Theory Interactions from the First Science Run of the LUX-ZEPLIN Experiment

The first science run of the LUX-ZEPLIN (LZ) experiment, a dual-phase xenon time project chamber operating in the Sanford Underground Research Facility in South Dakota, USA, has reported leading limits on spin-independent WIMP-nucleon interactions and interactions described from a non-relativistic effective field theory (NREFT). Using the same 5.5~t fiducial mass and 60 live days of exposure we report on the results of a relativistic extension to the NREFT. We present constraints on couplings from covariant interactions arising from the coupling of vector, axial currents, and electric dipole moments of the nucleon to the magnetic and electric dipole moments of the WIMP which cannot be described by recasting previous results described by an NREFT. Using a profile-likelihood ratio analysis, in an energy region between 0~keV_{nr} to 270~keV_{nr}, we report 90% confidence level exclusion limits on the coupling strength of five interactions in both the isoscalar and isovector bases. .

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