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Advances in Hyperspectral Image Classification Methods for Vegetation and Agricultural Cropland Studies

Hyperspectral data are becoming more widely available via sensors on airborne and unmanned aerial vehicle (UAV) platforms, as well as proximal platforms. While space-based hyperspectral data continue to be limited in availability, multiple spaceborne Earth-observing missions on traditional platforms are scheduled for launch, and companies are experimenting with small satellites for constellations to observe the Earth, as well as for planetary missions. Land cover mapping via classification is one of the most important applications of hyperspectral remote sensing and will increase in significance as time series of imagery are more readily available. However, while the narrow bands of hyperspectral data provide new opportunities for chemistry-based modeling and mapping, challenges remain. Hyperspectral data are high dimensional, and many bands are highly correlated or irrelevant for a given classification problem. For supervised classification methods, the quantity of training data is typically limited relative to the dimension of the input space. The resulting Hughes phenomenon, often referred to as the curse of dimensionality, increases potential for unstable parameter estimates, overfitting, and poor generalization of classifiers. This is particularly problematic for parametric approaches such as Gaussian maximum likelihood–based classifiers that have been the backbone of pixel-based multispectral classification methods. This issue has motivated investigation of alternatives, including regularization of the class covariance matrices, ensembles of weak classifiers, development of feature selection and extraction methods, adoption of nonparametric classifiers, and exploration of methods to exploit unlabeled samples via semi-supervised and active learning. Data sets are also quite large, motivating computationally efficient algorithms and implementations. This chapter provides an overview of the recent advances in classification methods for mapping vegetation using hyperspectral data. Three data sets that are used in the hyperspectral classification literature (e.g., Botswana Hyperion satellite data and AVIRIS airborne data over both Kennedy Space Center and Indian Pines) are described in Section 3.2 and used to illustrate methods described in the chapter. An additional high-resolution hyperspectral data set acquired by a SpecTIR sensor on an airborne platform over the Indian Pines area is included to exemplify the use of new deep learning approaches, and a multiplatform example of airborne hyperspectral data is provided to demonstrate transfer learning in hyperspectral image classification. Classical approaches for supervised and unsupervised feature selection and extraction are reviewed in Section 3.3. In particular, nonlinearities exhibited in hyperspectral imagery have motivated development of nonlinear feature extraction methods in manifold learning, which are outlined in Section 3.3.1.4. Spatial context is also important in classification of both natural vegetation with complex textural patterns and large agricultural fields with significant local variability within fields. Approaches to exploit spatial features at both the pixel level (e.g., co-occurrence–based texture and extended morphological attribute profiles [EMAPs]) and integration of segmentation approaches (e.g., HSeg) are discussed in this context in Section 3.3.2. Recently, classification methods that leverage nonparametric methods originating in the machine learning community have grown in popularity. An overview of both widely used and newly emerging approaches, including support vector machines (SVMs), Gaussian mixture models, and deep learning based on convolutional neural networks is provided in Section 3.4. Strategies to exploit unlabeled samples, including active learning and metric learning, which combine feature extraction and augmentation of the pool of training samples in an active learning framework, are outlined in Section 3.5. Integration of image segmentation with classification to accommodate spatial coherence typically observed in vegetation is also explored, including as an integrated active learning system. Exploitation of multisensor strategies for augmenting the pool of training samples is investigated via a transfer learning framework in Section 3.5.1.2. Finally, we look to the future, considering opportunities soon to be provided by new paradigms, as hyperspectral sensing is becoming common at multiple scales from ground-based and airborne autonomous vehicles to manned aircraft and space-based platforms.

Pasolli, Edoardo↗

Goddard Cumulus Ensemble (GCE) Model: Application for Understanding Preciptation Processes

The global hydrological cycle is central to climate system interactions and the key to understanding their behavior. Rainfall and its associated precipitation processes are a key link in the hydrologic cycle. Fresh water provided by tropical rainfall and its variability can exert a large impact upon the structure of the upper ocean layer. In addition, approximately two-thirds of the global rain falls in the Tropics, while the associated latent heat release accounts for about three-fourths of the total heat energy for the Earth's atmosphere. Precipitation from convective cloud systems comprises a large portion of tropical heating and rainfall. Furthermore, the vertical distribution of convective latent-heat releases modulates large-scale tropical circulations (e.g., the 30-60-day intraseasonal oscillation), which, in turn, impacts midlatitude weather through teleconnection patterns such as those associated with El Nino. Shifts in these global circulations can result in prolonged periods of droughts and floods, thereby exerting a tremendous impact upon the biosphere and human habitation. And yet, monthly rainfall over the tropical oceans is still not known within a factor of two over large (5 degrees latitude by 5 degrees longitude) areas. Hence, the Tropical Rainfall Measuring Mission (TRMM), a joint U.S./Japan space project, can provide a more accurate measurement of rainfall as well as estimate the four-dimensional structure of diabatic heating over the global tropics. The distributions of rainfall and inferred heating can be used to advance our understanding of the global energy and water cycle. In addition, this information can be used for global circulation and climate models for testing and improving their parameterizations.

Tao, Wei-Kuo↗

The effect of surface boundary conditions on the climate generated by a coarse-mesh general circulation model

A hierarchy of experiments was run, starting with an all water planet with zonally symmetric sea surface temperatures, then adding, one at a time, flat continents, mountains, surface physics, and realistic sea surface temperatures. The model was run with the sun fixed at a perpetual January. Ensemble means and standard deviations were computed and the t-test was used to determine the statistical significance of the results. The addition of realistic surface physics does not affect the model climatology to as large as extent as does the addition of mountains. Departures from zonal symmetry of the SST field result in a better simulation of the real atmosphere.

Cohen, C.↗

Fracture, failure, and fragmentation

A general approach is required for describing matter of behavior when the failure is likely to involve growth and coalescence of a large number of fractures. Failures of this kind appear frequently in rapid dynamic processes, particularly in the formation of spall fragments. An approach to formulating constitutive relations that accounts for the opening, shear and growth of an ensemble of cracks is discussed. The approach accounts for plastic flow accompanying fragmentation. The resulting constitutive relations were incorporated into a Lagrangian computer program. A theoretical approach to coalescence is described. The simplest formulation uses a linear Liouville equation, with crack growth limited by the mean free path of cracks, assumed constant. This approach allows for an anisotropic distribution of cracks. An alternative approach in which the decrease of the mean free path with increasing crack size is accounted for, but the crack distribution is assumed isotropic is described. A reduction of the governing Liouville equation to an ordinary differential equation of third order is possible, and the result can be used to determine how mean free path decreases with increasing crack size.

Dienes, J. K.↗

Uncertainty in Soil Moisture Retrievals: an Ensemble Approach Using SMOS L-Band Microwave Data

The uncertainty of soil moisture (SM) retrievals from satellite brightness temperature (TB) observations depends primarily on the choice of radiative transfer model (RTM) parameters, prior SM information and TB inputs. This paper studies the sensitivity of several (quasi-)operational and experimental SM retrieval products from the Soil Moisture Ocean Salinity (SMOS) mission to these choices at 11 reference sites, located in 7 watersheds across the United States (US). Different literature-based RTM parameter sets cause large biases between retrievals. Whereas typical RTM parameter sets are calibrated for SM retrievals, it is shown that a parameter set carefully optimized for TB forward modeling can also be used for retrieving SM. It is also shown that the inclusion of dynamic prior SM estimates in a Bayesian retrieval scheme can strongly improve SM retrievals, regardless of the choice of RTM parameters, and that the use of multi-angular and multi-polarization TB does not necessarily lead to superior retrievals compared to retrievals based on TB data at a single incidence angle and polarization. The second part of this paper evaluates ensemble uncertainty metrics for SM retrievals obtained by propagating a wide range of RTM parameters through the RTM. As expected for bounded variables, the spread in the ensemble SM retrievals is smallest for wet and dry SM values and highest for intermediate SM values. After removal of the strong long-term mean bias associated with the RTM parameter values for individual ensemble members, the remaining anomaly ensemble SM spread of 0.037 cu m/cu m approximates the actual time series unbiased root-mean-square-difference of 0.042 cu m/cu m between ensemble mean retrievals and in situ reference data across the reference sites. However, the temporal variability in the anomaly ensemble spread reveals higher-order biases in the retrieval error, which should be accounted for when characterizing retrieval error.

Jan Quets↗

Comparisons of some large scientific computers

In 1975, the National Aeronautics and Space Administration (NASA) began studies to assess the technical and economic feasibility of developing a computer having sustained computational speed of one billion floating point operations per second and a working memory of at least 240 million words. Such a powerful computer would allow computational aerodynamics to play a major role in aeronautical design and advanced fluid dynamics research. Based on favorable results from these studies, NASA proceeded with developmental plans. The computer was named the Numerical Aerodynamic Simulator (NAS). To help insure that the estimated cost, schedule, and technical scope were realistic, a brief study was made of past large scientific computers. Large discrepancies between inception and operation in scope, cost, or schedule were studied so that they could be minimized with NASA's proposed new compter. The main computers studied were the ILLIAC IV, STAR 100, Parallel Element Processor Ensemble (PEPE), and Shuttle Mission Simulator (SMS) computer. Comparison data on memory and speed were also obtained on the IBM 650, 704, 7090, 360-50, 360-67, 360-91, and 370-195; the CDC 6400, 6600, 7600, CYBER 203, and CYBER 205; CRAY 1; and the Advanced Scientific Computer (ASC). A few lessons learned conclude the report.

Credeur, K. R.↗

Tone-excited jet: Theory and experiments

A detailed study to understand the phenomenon of broadband jet-noise amplification produced by upstream discrete-tone sound excitation has been carried out. This has been achieved by simultaneous acquisition of the acoustic, mean velocity, turbulence intensities, and instability-wave pressure data. A 5.08 cm diameter jet has been tested for this purpose under static and also flight-simulation conditions. An open-jet wind tunnel has been used to simulate the flight effects. Limited data on heated jets have also been obtained. To improve the physical understanding of the flow modifications brought about by the upstream discrete-tone excitation, ensemble-averaged schlieren photographs of the jets have also been taken. Parallel to the experimental study, a mathematical model of the processes that lead to broadband-noise amplification by upstream tones has been developed. Excitation of large-scale turbulence by upstream tones is first calculated. A model to predict the changes in small-scale turbulence is then developed. By numerically integrating the resultant set of equations, the enhanced small-scale turbulence distribution in a jet under various excitation conditions is obtained. The resulting changes in small-scale turbulence have been attributed to broadband amplification of jet noise. Excellent agreement has been found between the theory and the experiments. It has also shown that the relative velocity effects are the same for the excited and the unexcited jets.

Ahuja, K. K.↗

Improving Assimilated Global Data Sets using TMI Rainfall and Columnar Moisture Observations

A global analysis that optimally combine observations from diverse sources with physical models of atmospheric and land processes can provide a comprehensive description of the climate systems. Currently, such data products contain significant errors in primary hydrological fields such as precipitation and evaporation, especially in the tropics. In this study, we show that assimilating precipitation and total precipitable water (TPW) retrievals derived from the TRMM Microwave Imager (TMI) improves not only the hydrological cycle but also key climate parameters such as clouds, radiation, and the large-scale circulation produced by the Goddard Earth Observing System (GEOS) data assimilation system (DAS). In particular, assimilating TMI rain improves clouds and radiation in areas of active convection, as well as the latent heating distribution and the large-scale motion field in the tropics, while assimilating TMI TPW heating distribution and the large-scale motion field in the tropics, while assimilating TMI TPW retrievals leads to reduced moisture biases and improved radiative fluxes in clear-sky regions. The improved analysis also improves short-range forecasts in the tropics. Ensemble forecasts initialized with the GEOS analysis incorporating TMI rain rates and TPW yield smaller biases in tropical precipitation forecasts beyond 1 day and better 500 hPa geopotential height forecasts up to 5 days. Results of this study demonstrate the potential of using high-quality space-borne rainfall and moisture observations to improve the quality of assimilated global data for climate analysis and weather forecasting applications

Hou, Arthur Y.↗

Validation of MODIS Aerosol Retrieval Over Ocean

The MODerate resolution Imaging Spectroradiometer (MODIS) algorithm for determining aerosol characteristics over ocean is performing with remarkable accuracy. A two-month data set of MODIS retrievals co-located with observations from the AErosol RObotic NETwork (AERONET) ground-based sunphotometer network provides the necessary validation. Spectral radiation measured by MODIS (in the range 550 - 2100 nm) is used to retrieve the aerosol optical thickness, effective particle radius and ratio between the submicron and micron size particles. MODIS-retrieved aerosol optical thickness at 660 nm and 870 nm fall within the expected uncertainty, with the ensemble average at 660 nm differing by only 2% from the AERONET observations and having virtually no offset. MODIS retrievals of aerosol effective radius agree with AERONET retrievals to within +/- 0.10 micrometers, while MODIS-derived ratios between large and small mode aerosol show definite correlation with ratios derived from AERONET data.

Remer, Lorraine A.↗

Making High Accuracy Null Depth Measurements for the LBTI Exozodi Survey

The characterization of exozodiacal light emission is both important for the understanding of planetary systems evolution and for the preparation of future space missions aiming to characterize low mass planets in the habitable zone of nearby main sequence stars. The Large Binocular Telescope Interferometer (LBTI) exozodi survey aims at providing a ten-fold improvement over current state of the art, measuring dust emission levels down to a typical accuracy of 12 zodis per star, for a representative ensemble of 30+ high priority targets. Such measurements promise to yield a final accuracy of about 2 zodis on the median exozodi level of the targets sample. Reaching a 1 sigma measurement uncertainty of 12 zodis per star corresponds to measuring interferometric cancellation (null) levels, i.e visibilities at the few 100 ppm uncertainty level. We discuss here the challenges posed by making such high accuracy mid-infrared visibility measurements from the ground and present the methodology we developed for achieving current best levels of 500 ppm or so. We also discuss current limitations and plans for enhanced exozodi observations over the next few years at LBTI.

exozodiacal light emission↗

Climate and the Global Famine of 1876-78

From 1875 to 1878, concurrent multiyear droughts in Asia, Brazil, and Africa, referred to as the Great Drought, caused widespread crop failures, catalyzing the so-called Global Famine, which had fatalities exceeding 50 million people and long-lasting societal consequences. Observations, paleoclimate reconstructions, and climate model simulations are used 1) to demonstrate the severity and characterize the evolution of drought across different regions, and 2) to investigate the underlying mechanisms driving its multiyear persistence. Severe or record-setting droughts occurred on continents in both hemispheres and in multiple seasons, with the "Monsoon Asia" region being the hardest hit, experiencing the single most intense and the second most expansive drought in the last 800 years. The extreme severity, duration, and extent of this global event is associated with an extraordinary combination of preceding cool tropical Pacific conditions (1870-76), a record-breaking El Nino (1877-78), a record strong Indian Ocean dipole (1877), and record warm North Atlantic Ocean (1878) conditions. Composites of historical analogs and two sets of ensemble simulations - one forced with global sea surface temperatures (SSTs) and another forced with tropical Pacific SST - were used to distinguish the role of the extreme conditions in different ocean basins. While the drought in most regions was largely driven by the tropical Pacific SST conditions, an extreme positive phase of the Indian Ocean dipole and warm North Atlantic SSTs, both likely aided by the strong El Nino in 1877-78, intensified and prolonged droughts in Australia and Brazil, respectively, and extended the impact to northern and southeastern Africa. Climatic conditions that caused the Great Drought and Global Famine arose from natural variability, and their recurrence, with hydrological impacts intensified by global warming, could again potentially undermine global food security.

multi-year drought↗

Making high accuracy null depth measurements for the LBTI Exozodi survey

The characterization of exozodiacal light emission is both important for the understanding of planetary systems evolution and for the preparation of future space missions aiming to characterize low mass planets in the habitable zone of nearby main sequence stars. The Large Binocular Telescope Interferometer (LBTI) exozodi survey aims at providing a ten-fold improvement over current state of the art, measuring dust emission levels down to a typical accuracy of ~12 zodis per star, for a representative ensemble of ~30+ high priority targets. Such measurements promise to yield a final accuracy of about 2 zodis on the median exozodi level of the targets sample. Reaching a 1σ measurement uncertainty of 12 zodis per star corresponds to measuring interferometric cancellation (“null”) levels, i.e visibilities at the few 100 ppm uncertainty level. We discuss here the challenges posed by making such high accuracy mid-infrared visibility measurements from the ground and present the methodology we developed for achieving current best levels of 500 ppm or so. We also discuss current limitations and plans for enhanced exozodi observations over the next few years at LBTI.

Mennesson, Bertrand↗

To What Extent Can Vegetation Mitigate Greenhouse Warming? A Modeling Approach

Climate models participating in the IPCC Fourth Assessment Report indicate that under a 2xCO2 environment, runoff would increase faster than precipitation overland. However, observations over large U.S watersheds indicate otherwise. This inconsistency suggests that there may be important feedbacks between climate and land surface unaccounted for in the present generation of models. We postulate that the increase in precipitation associated with the increase in CO2 is also increasing vegetation density, which may already be feeding back onto climate. Including this feedback in a climate model simulation resulted in precipitation and runoff trends consistent with observations and reduced the warming by 0.6OC overland. This unaccounted for missing water may be linked to about 10% of the missing land carbon sink. A recent compilation of outputs from 19 coupled atmosphere-ocean general circulation models used in the IPCC Fourth Assessment Report (AR4) shows projected increases in air temperature, precipitation and river discharge for 24 major rivers in the world in response to doubling CO2 by the end of the century (1). The ensemble mean from these models also indicates that, compared to their respective baselines overland, the global mean of the runoff change would increase faster (8.9% per year) than that of the precipitation (5% per year). We analyze century-scale observed annual runoff time-series (1901-2002) over 9 hydrological units covering large regions of the Eastern United States (Fig.1) compiled by the United States Geological Survey (USGS)(2). These regions were selected because they are the most forested; the least water-limited and are not under extensive irrigation. We compare these time-series to similar time-series of observed annual precipitation anomalies spanning the period 1900-1995 (3). Both time-series exhibit a positive longterm trend (Fig. 2); however, in contrast to the analysis of (I), these historic data records show that the rate of precipitation increase is 5.5 % per year, roughly double the rate of runoff increase of 3.1 % per year.

Bounoua, L.↗

Impact of Soil Moisture Initialization on Seasonal Weather Prediction

The potential role of soil moisture initialization in seasonal forecasting is illustrated through ensembles of simulations with the NASA Seasonal-to-Interannual Prediction Project (NSIPP) model. For each boreal summer during 1997-2001, we generated two 16-member ensembles of 3-month simulations. The first, "AMIP-style" ensemble establishes the degree to which a perfect prediction of SSTs would contribute to the seasonal prediction of precipitation and temperature over continents. The second ensemble is identical to the first, except that the land surface is also initialized with "realistic" soil moisture contents through the continuous prior application (within GCM simulations leading up to the start of the forecast period) of a daily observational precipitation data set and the associated avoidance of model drift through the scaling of all surface prognostic variables. A comparison of the two ensembles shows that soil moisture initialization has a statistically significant impact on summertime precipitation and temperature over only a handful of continental regions. These regions agree, to first order, with regions that satisfy three conditions: (1) a tendency toward large initial soil moisture anomalies, (2) a strong sensitivity of evaporation to soil moisture, and (3) a strong sensitivity of precipitation to evaporation. The degree to which the initialization improves forecasts relative to observations is mixed, reflecting a critical need for the continued development of model parameterizations and data analysis strategies.

Koster, Randal D.↗

Making High Accuracy Null Depth Measurements for the LBTI ExoZodi Survey

The characterization of exozodiacal light emission is both important for the understanding of planetary systems evolution and for the preparation of future space missions aiming to characterize low mass planets in the habitable zone of nearby main sequence stars. The Large Binocular Telescope Interferometer (LBTI) exozodi survey aims at providing a ten-fold improvement over current state of the art, measuring dust emission levels down to a typical accuracy of approximately 12 zodis per star, for a representative ensemble of approximately 30+ high priority targets. Such measurements promise to yield a final accuracy of about 2 zodis on the median exozodi level of the targets sample. Reaching a 1 sigma measurement uncertainty of 12 zodis per star corresponds to measuring interferometric cancellation (null) levels, i.e visibilities at the few 100 ppm uncertainty level. We discuss here the challenges posed by making such high accuracy mid-infrared visibility measurements from the ground and present the methodology we developed for achieving current best levels of 500 ppm or so. We also discuss current limitations and plans for enhanced exozodi observations over the next few years at LBTI.

exozodiacal light emission↗

Continuum Covariance Propagation for Understanding Variance Loss in Advective Systems

Motivated by the spurious variance loss encountered during covariance propagation in atmospheric and other large-scale data assimilation systems, we consider the problem for state dynamics governed by the continuity and related hyperbolic partial differential equations. This loss of variance has been attributed to reduced-rank representations of the covariance matrix, as in ensemble methods for example, or else to the use of dissipative numerical methods. Through a combination of analytical work and numerical experiments, we demonstrate that significant variance loss, as well as gain, typically occurs during covariance propagation, even at full rank. The cause of this unusual behavior is a discontinuous change in the continuum covariance dynamics as correlation lengths become small, for instance in the vicinity of sharp gradients in the velocity field. This discontinuity in the covariance dynamics arises from hyperbolicity: the diagonal of the kernel of the covariance operator is a characteristic surface for advective dynamics. Our numerical experiments demonstrate that standard numerical methods for evolving the state are not adequate for propagating the covariance, because16they do not capture the discontinuity in the continuum covariance dynamics as correlations lengths tend to zero. Our analytical and numerical results show that this leads to significant, spurious variance loss in certain regions, and gain in others. The results suggest that developing local covariance propagation methods designed specifically to capture covariance evolution near the diagonal may prove a useful alternative to current methods of covariance propagation.

covariance propagation↗

Transition-Sensitized Turbulence Models for Compressible and Incompressible Flows

During the grant period from January 1,2002 to December 31,2002 work was carried out on three projects to extend the range of applicability of advanced turbulence models. First, a new transition-sensitized turbulence model was tested and refined. Second, the influence of compressibility on the pressure-strain rate correlation was studied. Third, the relationship between time-filtered large eddy simulation (TLES) and Reynolds-averaged Navier Stokes (RANS) modeling was investigated leading to submission of the article. The transition-sensitized turbulence model encompasses the early-stage transition and turbulent flow regimes describing the evolution of the ensemble mean disturbance energy and dissipation rate. It is founded on a consistent mathematical description of the laminar regime with its linear disturbances and the fully turbulent regime with its stochastic fluctuations. The unified description is provided by the ensemble viewpoint.

Thacker, William D.↗

Assimilation of GRACE Terrestrial Water Storage Data into a Land Surface Model

The NASA Gravity Recovery and Climate Experiment (GRACE) system of satellites provides observations of large-scale, monthly terrestrial water storage (TWS) changes. In. this presentation we describe a land data assimilation system that ingests GRACE observations and show that the assimilation improves estimates of water storage and fluxes, as evaluated against independent measurements. The ensemble-based land data assimilation system uses a Kalman smoother approach along with the NASA Catchment Land Surface Model (CLSM). We assimilated GRACE-derived TWS anomalies for each of the four major sub-basins of the Mississippi into the Catchment Land Surface Model (CLSM). Compared with the open-loop (no assimilation) CLSM simulation, assimilation estimates of groundwater variability exhibited enhanced skill with respect to measured groundwater. Assimilation also significantly increased the correlation between simulated TWS and gauged river flow for all four sub-basins and for the Mississippi River basin itself. In addition, model performance was evaluated for watersheds smaller than the scale of GRACE observations, in the majority of cases, GRACE assimilation led to increased correlation between TWS estimates and gauged river flow, indicating that data assimilation has considerable potential to downscale GRACE data for hydrological applications. We will also describe how the output from the GRACE land data assimilation system is now being prepared for use in the North American Drought Monitor.

Reichle, Rolf H.↗