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All sourcesNASA NTRSDOE OSTI
DOE OSTI2012

ON THE LINEAR TERM CORRECTION FOR NEEDLET/WAVELET NON-GAUSSIANITY ESTIMATORS

We derive the linear correction term for needlet and wavelet estimators of the bispectrum and the nonlinearity parameter f{sub NL} on cosmic microwave background radiation data. We show that on masked WMAP-like data with anisotropic noise, the error bars improve by 10%-20% and almost reach the optimal error bars obtained with the bispectrum estimator also known as 'KSW'. In the limit of full-sky and isotropic noise, this term vanishes. We apply needlet and wavelet estimators to the WMAP 7-year data and obtain our best estimate f{sub NL} = 37.5 {+-} 21.8 (68% CL).

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2013

DETECTION OF PLASMA FLUCTUATIONS IN WHITE-LIGHT IMAGES OF THE OUTER SOLAR CORONA: INVESTIGATION OF THE SPATIAL AND TEMPORAL EVOLUTION

This work focuses on the first results from the identification and characterization of periodic plasma density fluctuations in the outer corona, observed in STEREO-A COR1 white-light image time series. A two-dimensional reconstruction of the spatial distribution and temporal evolution of the coronal fluctuation power has been performed over the whole plane of the sky, from 1.4 to 4.0 R{sub Sun }. The adopted diagnostic tool is based on wavelet transforms. This technique, with respect to the standard Fourier analysis, has the advantage of localizing non-persistent fluctuating features and exploring variations of the relating wavelet power in both space and time. The map of the variance of the coronal brightness clearly outlines intermittent spatially coherent fluctuating features, localized along, or adjacent to, the strongest magnetic field lines. In most cases, they do not correspond to the visible coronal structures in the brightness maps. The results obtained provide a scenario in which the solar corona shows quasi-periodic, non-stationary density variations characterized by a wide range of temporal and spatial scales and strongly confined by the magnetic field topology. In addition, structures fluctuating with larger power are larger in size and evolve more slowly. The characteristic periodicities of the fluctuations are comparable to their lifetimes. This suggests that plasma fluctuations lasting only one or two wave periods and initially characterized by a single dominant periodicity either rapidly decay into a turbulent mixed flow via nonlinear interactions with other plasma modes, or they are damped by thermal conduction. The periodic non-stationary coronal fluctuations outlined by the closed field lines at low and mid latitudes might be associated with the existence of slow standing magneto-acoustic waves excited by the convective supergranular motion. The fluctuating ray-like structures observed along open field lines appear to be linked either to the intermittent nature of the processes underlying the generation of magnetic reconnection in the polar regions or to the oscillatory transverse displacements of the coronal ray itself.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2014

A new multi-dimensional general relativistic neutrino hydrodynamics code for core-collapse supernovae. IV. The neutrino signal

Considering six general relativistic, two-dimensional (2D) supernova (SN) explosion models of progenitor stars between 8.1 and 27 M {sub ☉}, we systematically analyze the properties of the neutrino emission from core collapse and bounce to the post-explosion phase. The models were computed with the VERTEX-COCONUT code, using three-flavor, energy-dependent neutrino transport in the ray-by-ray-plus approximation. Our results confirm the close similarity of the mean energies, (E), of ν-bar {sub e} and heavy-lepton neutrinos and even their crossing during the accretion phase for stars with M ≳ 10 M {sub ☉} as observed in previous 1D and 2D simulations with state-of-the-art neutrino transport. We establish a roughly linear scaling of 〈E{sub ν-bar{sub e}}〉 with the proto-neutron star (PNS) mass, which holds in time as well as for different progenitors. Convection inside the PNS affects the neutrino emission on the 10%-20% level, and accretion continuing beyond the onset of the explosion prevents the abrupt drop of the neutrino luminosities seen in artificially exploded 1D models. We demonstrate that a wavelet-based time-frequency analysis of SN neutrino signals in IceCube will offer sensitive diagnostics for the SN core dynamics up to at least ∼10 kpc distance. Strong, narrow-band signal modulations indicate quasi-periodic shock sloshing motions due to the standing accretion shock instability (SASI), and the frequency evolution of such 'SASI neutrino chirps' reveals shock expansion or contraction. The onset of the explosion is accompanied by a shift of the modulation frequency below 40-50 Hz, and post-explosion, episodic accretion downflows will be signaled by activity intervals stretching over an extended frequency range in the wavelet spectrogram.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

The Atacama Cosmology Telescope: map-based noise simulations for DR6

Abstract The increasing statistical power of cosmic microwave background (CMB) datasets requires a commensurate effort in understanding their noise properties. The noise in maps from ground-based instruments is dominated by large-scale correlations, which poses a modeling challenge. This paper develops novel models of the complex noise covariance structure in the Atacama Cosmology Telescope Data Release 6 (ACT DR6) maps. We first enumerate the noise properties that arise from the combination of the atmosphere and the ACT scan strategy. We then prescribe a class of Gaussian, map-based noise models, including a new wavelet-based approach that uses directional wavelet kernels for modeling correlated instrumental noise. The models are empirical, whose only inputs are a small number of independent realizations of the same region of sky. We evaluate the performance of these models against the ACT DR6 data by drawing ensembles of noise realizations. Applying these simulations to the ACT DR6 power spectrum pipeline reveals a ∼ 20% excess in the covariance matrix diagonal when compared to an analytic expression that assumes noise properties are uniquely described by their power spectrum. Along with our public code,mnms, this work establishes a necessary element in the science pipelines of both ACT DR6 and future ground-based CMB experiments such as the Simons Observatory (SO).

Astronomy & Astrophysics↗
DOE OSTI2021

The WaZP galaxy cluster sample of the dark energy survey year 1

We present a new (2+1)D galaxy cluster finder based on photometric redshifts called Wavelet Z Photometric (WaZP) applied to DES first year (Y1A1) data. The results are compared to clusters detected by the South Pole Telescope (SPT) survey and the redMaPPer cluster finder, the latter based on the same photometric data. WaZP searches for clusters in wavelet-based density maps of galaxies selected in photometric redshift space without any assumption on the cluster galaxy populations. The comparison to other cluster samples was performed with a matching algorithm based on angular proximity and redshift difference of the clusters. It led to the development of a new approach to match two optical cluster samples, following an iterative approach to minimize incorrect associations. The WaZP cluster finder applied to DES Y1A1 galaxy survey (1511.13 deg^2 up to = 23 mag) led to the detection of 60 547 galaxy clusters with redshifts 0.05 < z < 0.9 and richness N_gals ≥ 5. Considering the overlapping regions and redshift ranges between the DES Y1A1 and SPT cluster surveys, all sz based SPT clusters are recovered by the WaZP sample. The comparison between WaZP and redMaPPer cluster samples showed an excellent overall agreement for clusters with richness N_gals (λ for redMaPPer) greater than 25 (20), with 95 per cent recovery on both directions. Based on the cluster cross-match, we explore the relative fragmentation of the two cluster samples and investigate the possible signatures of unmatched clusters.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Fine structure of the isovector giant dipole resonance in Nd 142 – 150 and Sm 152

Inelastic proton scattering at energies of a few hundred MeV and very-forward scattering angles including 0° has been established as a tool for the study of electric-dipole strength distributions in nuclei. The present work reports a systematic investigation of the chain of stable even-mass Nd isotopes representing a transition from spherical to quadrupole-deformed nuclei. Extraction of the equivalent photo-absorption cross sections and analysis of their fine structure in the energy region of the isovector giant dipole resonance (IVGDR). Method: Proton inelastic scattering reactions of 200 MeV protons were measured at the iThemba Laboratory for Accelerator Based Sciences in Cape Town, South Africa. The scattering products were momentum-analyzed by the K600 magnetic spectrometer positioned at θ Lab = 0°. Using dispersion-matching techniques, energy resolutions of ΔE ≈ 40–50 keV (full width at half maximum) were obtained. After subtraction of background and contributions from other multipoles, the spectra were converted to photoabsorption cross sections using the equivalent virtual-photon method. Wavelet-analysis techniques are used to extract characteristic energy scales of the fine structure of the IVGDR from the experimental data. Fine structure of the IVGDR is observed even for the most deformed nuclei studied. Comparisons between the extracted experimental energy scales and those energy scales obtained from the quasiparticle-phonon model (QPM) and Skyrme separable random phase approximation (SSRPA) predictions provide insight into the role of different giant-resonance damping mechanisms. It can be seen that the scales in the spherical and most likely also in the deformed nuclei mainly result from the fragmentation of the one-particle-one-hole (1p1h) strength into several dominant transitions serving as doorway states. In cases where calculations beyond the 1p1h level are available, some impact of the spreading due to coupling of the two-particle-two-hole (2p2h) states to the 1p1h doorway states is observed. New virtual-photon absorption data for the chain of stable Nd isotopes and 152 Sm are presented, with a focus on the phenomenon of nonstatistical cross-section fluctuations, referred to as fine structure, in the energy region of the IVGDR. The wavelet-analysis techniques used allowed for the features of the fine structure to be quantified in the form of characteristic scales. Finally, comparisons between experimental results and model predictions indicate that Landau damping seems to be the main source of the fine structure in both the spherical and deformed nuclei, but calculations including 2p2h degrees of freedom would be beneficial to confirm this for the deformed cases.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2019

Effects of isothermal stratification strength on vorticity dynamics for single-mode compressible Rayleigh-Taylor instability

The effects of isothermal initial stratification on the dynamics of the vorticity for single-mode Rayleigh-Taylor instability (RTI) are examined using two-dimensional fully compressible wavelet-based direct numerical simulations. Here, the simulations model low Atwood number ( A = 0.04) RTI development for four different initial stratification strengths, corresponding to Mach numbers from 0.3 (weakly stratified) to 1.2 (strongly stratified), and for three different Reynolds numbers, from 25 500 to 102 000. Here, the Mach number is based on the Atwood-independent gravity wave speed and characterizes the strength of the initial stratification. All simulations use adaptive wavelet-based mesh refinement to achieve very fine spatial resolutions at relatively low computational cost. For all stratifications, the RTI bubble and spike go through the exponential growth regime, followed by a slowing of the RTI evolution.

42 ENGINEERING↗
DOE OSTI2025

Massive compression for high data rate macromolecular crystallography (HDRMX): impact on diffraction data and subsequent structural analysis

New higher-count-rate, integrating, large-area X-ray detectors with framing rates as high as 17400 images per second are beginning to be available. These will soon be used for specialized macromolecular crystallography experiments but will require optimal lossy compression algorithms to enable systems to keep up with data throughput. Some information may be lost. Can we minimize this loss with acceptable impact on structural information? To explore this question, we have considered several approaches: summing short sequences of images, binning to create the effect of larger pixels, use of JPEG-2000 lossy wavelet-based compression, and use of Hcompress, which is a Haar-wavelet-based lossy compression borrowed from astronomy. We also explore the effect of the combination of summing, binning, and Hcompress or JPEG-2000. In each of these last two methods one can specify approximately how much one wants the result to be compressed from the starting file size. These provide particularly effective lossy compressions that retain essential information for structure solution from Bragg reflections.

47 OTHER INSTRUMENTATION↗
DOE OSTI2026

A Pulsar-Inspired Timing Framework for Power System: Optimization and Performance Evaluation

Due to their excellent stability, neutron pulsar stars are considered promising candidate timing sources for power system applications. However, the complexity of pulsar signals necessitates advanced processing algorithms to provide accurate timing references. This paper presents the foundational framework for pulsar signal processing, serving as the basis for further optimization. To enhance the timing accuracy and computation efficiency in pulsar period searches, three algorithms are proposed as the initial optimization step: wavelet de-noising, fast folding, and cross-correlation for profile evaluation. Wavelet de-noising improves signal-to-noise ratio (SNR) by 36%–70%. Fast folding reduces computation time from hundreds of seconds to mere milliseconds. Cross-correlation works better than traditional SNR-based methods by effectively identifying the optimal period. The performance of the proposed algorithms is evaluated using observation data from telescopes. Together, these algorithms significantly improve pulsar timing performance, reducing the error of the Pulse Per Second (PPS) signal from hundreds to tens of microseconds.

Wu, Ori [ORNL] (ORCID:0000000326723410)↗
DOE OSTI2026

A Physics-Aligned Multi-Domain Machine Learning Framework for Time-Localised Diagnosis of Power Electronics Faults

This paper presents a physics-aligned framework for fault diagnosis in multi-phase power-electronic systems using cycle-synchronous windowing and multi-domain features derived from Fourier, wavelet, and Hilbert–Huang representations. While both logistic regression and multilayer perceptron (MLP) models achieve perfect performance under standard evaluation, blind unseen testing reveals a critical failure in a baseline MLP. This is shown to arise from model selection based on validation accuracy. Using validation-loss-based selection restores correct unseen performance and improves confidence. Feature ablation shows that Fourier and wavelet features dominate, while computational analysis indicates that feature extraction, particularly HHT, governs runtime.

Kumar, Praveen [ORNL] (ORCID:0000000291877857)↗
DOE OSTI2018

Climate reconstruction for the Entre‐Douro‐e‐Minho region ( NW Portugal) between AD 1626 and AD 1820: synthesis of viticulture data and foraminiferal evidence

This work presents two novel climate‐related time series for the northwest of Portugal. The first is an AD 1626–1820 triennial‐resolved wine production series, based on the Benedictine accounts from six monasteries of the Entre‐Douro‐e‐Minho ( EDM ) region. The second, an AD 1654–2010 benthic foraminiferal record from the Caminha salt marsh, located in the lower estuary of the Minho River. The series were analysed together for the common period to outline how both palaeoclimatic proxies respond to the most likely natural environmental drivers of temporal variability, solar forcing included. Singular spectral analysis revealed a common significant multidecadal periodicity agreeing with recognized long‐term changes in solar activity, i.e. the Lower Gleissberg cycle (50–80 years). The application of wavelet analysis allowed the detection of high coherence at this time scale (centred at c . 64 years) between marsh foraminifera and both total solar irradiance and the North Atlantic Oscillation index. This relationship persists throughout the c . AD 1730–1875 period. The continuous wavelet transform results for wine production were inconclusive. As the time‐span analysed is recognized as one of high socio‐economic and political distress, the main human‐driven impacts on wine production, particularly in the two periods of greatly reduced solar activity – the Maunder and Dalton Minima – are reviewed in the light of the available historical records. In addition to a documented climate‐related agricultural crisis in Portugal, damage and losses to wine production may have been triggered by several local and international conflicts in which the country was involved. But to what extent the two influences contributed to the wine production variations observed in the EDM region during both periods remains an open question.

Moreno, João↗
DOE OSTI2012

Comparative analysis of nonlinear dimensionality reduction techniques for breast MRI segmentation

Purpose: Visualization of anatomical structures using radiological imaging methods is an important tool in medicine to differentiate normal from pathological tissue and can generate large amounts of data for a radiologist to read. Integrating these large data sets is difficult and time-consuming. A new approach uses both supervised and unsupervised advanced machine learning techniques to visualize and segment radiological data. This study describes the application of a novel hybrid scheme, based on combining wavelet transform and nonlinear dimensionality reduction (NLDR) methods, to breast magnetic resonance imaging (MRI) data using three well-established NLDR techniques, namely, ISOMAP, local linear embedding (LLE), and diffusion maps (DfM), to perform a comparative performance analysis. Methods: Twenty-five breast lesion subjects were scanned using a 3T scanner. MRI sequences used were T1-weighted, T2-weighted, diffusion-weighted imaging (DWI), and dynamic contrast-enhanced (DCE) imaging. The hybrid scheme consisted of two steps: preprocessing and postprocessing of the data. The preprocessing step was applied for B{sub 1} inhomogeneity correction, image registration, and wavelet-based image compression to match and denoise the data. In the postprocessing step, MRI parameters were considered data dimensions and the NLDR-based hybrid approach was applied to integrate the MRI parameters into a single image, termed the embedded image. This was achieved by mapping all pixel intensities from the higher dimension to a lower dimensional (embedded) space. For validation, the authors compared the hybrid NLDR with linear methods of principal component analysis (PCA) and multidimensional scaling (MDS) using synthetic data. For the clinical application, the authors used breast MRI data, comparison was performed using the postcontrast DCE MRI image and evaluating the congruence of the segmented lesions. Results: The NLDR-based hybrid approach was able to define and segment both synthetic and clinical data. In the synthetic data, the authors demonstrated the performance of the NLDR method compared with conventional linear DR methods. The NLDR approach enabled successful segmentation of the structures, whereas, in most cases, PCA and MDS failed. The NLDR approach was able to segment different breast tissue types with a high accuracy and the embedded image of the breast MRI data demonstrated fuzzy boundaries between the different types of breast tissue, i.e., fatty, glandular, and tissue with lesions (>86%). Conclusions: The proposed hybrid NLDR methods were able to segment clinical breast data with a high accuracy and construct an embedded image that visualized the contribution of different radiological parameters.

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2015

A novel partial volume effects correction technique integrating deconvolution associated with denoising within an iterative PET image reconstruction

Purpose: Partial volume effect (PVE) plays an important role in both qualitative and quantitative PET image accuracy, especially for small structures. A previously proposed voxelwise PVE correction method applied on PET reconstructed images involves the use of Lucy–Richardson deconvolution incorporating wavelet-based denoising to limit the associated propagation of noise. The aim of this study is to incorporate the deconvolution, coupled with the denoising step, directly inside the iterative reconstruction process to further improve PVE correction. Methods: The list-mode ordered subset expectation maximization (OSEM) algorithm has been modified accordingly with the application of the Lucy–Richardson deconvolution algorithm to the current estimation of the image, at each reconstruction iteration. Acquisitions of the NEMA NU2-2001 IQ phantom were performed on a GE DRX PET/CT system to study the impact of incorporating the deconvolution inside the reconstruction [with and without the point spread function (PSF) model] in comparison to its application postreconstruction and to standard iterative reconstruction incorporating the PSF model. The impact of the denoising step was also evaluated. Images were semiquantitatively assessed by studying the trade-off between the intensity recovery and the noise level in the background estimated as relative standard deviation. Qualitative assessments of the developed methods were additionally performed on clinical cases. Results: Incorporating the deconvolution without denoising within the reconstruction achieved superior intensity recovery in comparison to both standard OSEM reconstruction integrating a PSF model and application of the deconvolution algorithm in a postreconstruction process. The addition of the denoising step permitted to limit the SNR degradation while preserving the intensity recovery. Conclusions: This study demonstrates the feasibility of incorporating the Lucy–Richardson deconvolution associated with a wavelet-based denoising in the reconstruction process to better correct for PVE. Future work includes further evaluations of the proposed method on clinical datasets and the use of improved PSF models.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2015

Predicting adenocarcinoma recurrence using computational texture models of nodule components in lung CT

Purpose: To investigate the importance of presurgical computed tomography (CT) intensity and texture information from ground-glass opacities (GGO) and solid nodule components for the prediction of adenocarcinoma recurrence. Methods: For this study, 101 patients with surgically resected stage I adenocarcinoma were selected. During the follow-up period, 17 patients had disease recurrence with six associated cancer-related deaths. GGO and solid tumor components were delineated on presurgical CT scans by a radiologist. Computational texture models of GGO and solid regions were built using linear combinations of steerable Riesz wavelets learned with linear support vector machines (SVMs). Unlike other traditional texture attributes, the proposed texture models are designed to encode local image scales and directions that are specific to GGO and solid tissue. The responses of the locally steered models were used as texture attributes and compared to the responses of unaligned Riesz wavelets. The texture attributes were combined with CT intensities to predict tumor recurrence and patient hazard according to disease-free survival (DFS) time. Two families of predictive models were compared: LASSO and SVMs, and their survival counterparts: Cox-LASSO and survival SVMs. Results: The best-performing predictive model of patient hazard was associated with a concordance index (C-index) of 0.81 ± 0.02 and was based on the combination of the steered models and CT intensities with survival SVMs. The same feature group and the LASSO model yielded the highest area under the receiver operating characteristic curve (AUC) of 0.8 ± 0.01 for predicting tumor recurrence, although no statistically significant difference was found when compared to using intensity features solely. For all models, the performance was found to be significantly higher when image attributes were based on the solid components solely versus using the entire tumors (p < 3.08 × 10{sup −5}). Conclusions: This study constitutes a novel perspective on how to interpret imaging information from CT examinations by suggesting that most of the information related to adenocarcinoma aggressiveness is related to the intensity and morphological properties of solid components of the tumor. The prediction of adenocarcinoma relapse was found to have low specificity but very high sensitivity. Our results could be useful in clinical practice to identify patients for which no recurrence is expected with a very high confidence using a presurgical CT scan only. It also provided an accurate estimation of the risk of recurrence after a given duration t from surgical resection (i.e., C-index = 0.81 ± 0.02)

60 APPLIED LIFE SCIENCES↗
DOE OSTI2015

TU-AB-BRA-10: Prognostic Value of Intra-Radiation Treatment FDG-PET and CT Imaging Features in Locally Advanced Head and Neck Cancer

Purpose: To predict response to radiation treatment using computational FDG-PET and CT images in locally advanced head and neck cancer (HNC). Methods: 68 patients with State III-IVB HNC treated with chemoradiation were included in this retrospective study. For each patient, we analyzed primary tumor and lymph nodes on PET and CT scans acquired both prior to and during radiation treatment, which led to 8 combinations of image datasets. From each image set, we extracted high-throughput, radiomic features of the following types: statistical, morphological, textural, histogram, and wavelet, resulting in a total of 437 features. We then performed unsupervised redundancy removal and stability test on these features. To avoid over-fitting, we trained a logistic regression model with simultaneous feature selection based on least absolute shrinkage and selection operator (LASSO). To objectively evaluate the prediction ability, we performed 5-fold cross validation (CV) with 50 random repeats of stratified bootstrapping. Feature selection and model training was solely conducted on the training set and independently validated on the holdout test set. Receiver operating characteristic (ROC) curve of the pooled Result and the area under the ROC curve (AUC) was calculated as figure of merit. Results: For predicting local-regional recurrence, our model built on pre-treatment PET of lymph nodes achieved the best performance (AUC=0.762) on 5-fold CV, which compared favorably with node volume and SUVmax (AUC=0.704 and 0.449, p<0.001). Wavelet coefficients turned out to be the most predictive features. Prediction of distant recurrence showed a similar trend, in which pre-treatment PET features of lymph nodes had the highest AUC of 0.705. Conclusion: The radiomics approach identified novel imaging features that are predictive to radiation treatment response. If prospectively validated in larger cohorts, they could aid in risk-adaptive treatment of HNC.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2015

TU-CD-BRB-08: Radiomic Analysis of FDG-PET Identifies Novel Prognostic Imaging Biomarkers in Locally Advanced Pancreatic Cancer Patients Treated with SBRT

Purpose: This study aims to identify novel prognostic imaging biomarkers in locally advanced pancreatic cancer (LAPC) using quantitative, high-throughput image analysis. Methods: 86 patients with LAPC receiving chemotherapy followed by SBRT were retrospectively studied. All patients had a baseline FDG-PET scan prior to SBRT. For each patient, we extracted 435 PET imaging features of five types: statistical, morphological, textural, histogram, and wavelet. These features went through redundancy checks, robustness analysis, as well as a prescreening process based on their concordance indices with respect to the relevant outcomes. We then performed principle component analysis on the remaining features (number ranged from 10 to 16), and fitted a Cox proportional hazard regression model using the first 3 principle components. Kaplan-Meier analysis was used to assess the ability to distinguish high versus low-risk patients separated by median predicted survival. To avoid overfitting, all evaluations were based on leave-one-out cross validation (LOOCV), in which each holdout patient was assigned to a risk group according to the model obtained from a separate training set. Results: For predicting overall survival (OS), the most dominant imaging features were wavelet coefficients. There was a statistically significant difference in OS between patients with predicted high and low-risk based on LOOCV (hazard ratio: 2.26, p<0.001). Similar imaging features were also strongly associated with local progression-free survival (LPFS) (hazard ratio: 1.53, p=0.026) on LOOCV. In comparison, neither SUVmax nor TLG was associated with LPFS (p=0.103, p=0.433) (Table 1). Results for progression-free survival and distant progression-free survival showed similar trends. Conclusion: Radiomic analysis identified novel imaging features that showed improved prognostic value over conventional methods. These features characterize the degree of intra-tumor heterogeneity reflected on FDG-PET images, and their biological underpinnings warrant further investigation. If validated in large, prospective cohorts, this method could be used to stratify patients based on individualized risk.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

SU-D-207B-01: Radiomics Feature Reproducibility From Repeat CT Scans of Patients with Rectal Cancer

Purpose: To evaluate the reproducibility of radiomics features by repeating computed tomographic (CT) scans in rectal cancer. To choose stable radiomics features for rectal cancer. Methods: 40 rectal cancer patients were enrolled in this study, each of whom underwent two CT scans within average 8.7 days (5 days to 17 days), before any treatment was delivered. The rectal gross tumor volume (GTV) was distinguished and segmented by an experienced oncologist in both CTs. Totally, more than 2000 radiomics features were defined in this study, which were divided into four groups (I: GLCM, II: GLRLM III: Wavelet GLCM and IV: Wavelet GLRLM). For each group, five types of features were extracted (Max slice: features from the largest slice of target images, Max value: features from all slices of target images and choose the maximum value, Min value: minimum value of features for all slices, Average value: average value of features for all slices, Matrix sum: all slices of target images translate into GLCM and GLRLM matrices and superpose all matrices, then extract features from the superposed matrix). Meanwhile a LOG (Laplace of Gauss) filter with different parameters was applied to these images. Concordance correlation coefficients (CCC) and inter-class correlation coefficients (ICC) were calculated to assess the reproducibility. Results: 403 radiomics features were extracted from each type of patients’ medical images. Features of average type are the most reproducible. Different filters have little effect for radiomics features. For the average type features, 253 out of 403 features (62.8%) showed high reproducibility (ICC≥0.8), 133 out of 403 features (33.0%) showed medium reproducibility (0.8≥ICC≥0.5) and 17 out of 403 features (4.2%) showed low reproducibility (ICC≥0.5). Conclusion: The average type radiomics features are the most stable features in rectal cancer. Further analysis of these features of rectal cancer can be warranted for treatment monitoring and prognosis prediction.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

SU-F-R-35: Repeatability of Texture Features in T1- and T2-Weighted MR Images

Purpose: To evaluate repeatability of lung tumor texture features from inspiration/expiration MR image pairs for potential use in patient specific care models and applications. Repeatability is a desirable and necessary characteristic of features included in such models. Methods: T1-weighted Volumetric Interpolation Breath-Hold Examination (VIBE) and/or T2-weighted MRI scans were acquired for 15 patients with non-small cell lung cancer before and during radiotherapy for a total of 32 and 34 same session inspiration-expiration breath-hold image pairs respectively. Bias correction was applied to the VIBE (VIBE-BC) and T2-weighted (T2-BC) images. Fifty-nine texture features at five wavelet decomposition ratios were extracted from the delineated primary tumor including: histogram(HIST), gray level co-occurrence matrix(GLCM), gray level run length matrix(GLRLM), gray level size zone matrix(GLSZM), and neighborhood gray tone different matrix (NGTDM) based features. Repeatability of the texture features for VIBE, VIBE-BC, T2-weighted, and T2-BC image pairs was evaluated by the concordance correlation coefficient (CCC) between corresponding image pairs, with a value greater than 0.90 indicating repeatability. Results: For the VIBE image pairs, the percentage of repeatable texture features by wavelet ratio was between 20% and 24% of the 59 extracted features; the T2-weighted image pairs exhibited repeatability in the range of 44–49%. The percentage dropped to 10–20% for the VIBE-BC images, and 12–14% for the T2-BC images. In addition, five texture features were found to be repeatable in all four image sets including two GLRLM, two GLZSM, and one NGTDN features. No single texture feature category was repeatable among all three image types; however, certain categories performed more consistently on a per image type basis. Conclusion: We identified repeatable texture features on T1- and T2-weighted MRI scans. These texture features should be further investigated for use in specific applications such as tissue classification and changes during radiation therapy utilizing a standard imaging protocol. Authors have the following disclosures: a research agreement with Philips Medical systems (Hugo, Weiss), a license agreement with Varian Medical Systems (Hugo, Weiss), research grants from the National Institute of Health (Hugo, Weiss), UpToDate royalties (Weiss), and none(Mahon, Ford, Karki). Authors have no potential conflicts of interest to disclose.

60 APPLIED LIFE SCIENCES↗