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DOE OSTI2023

DEHP− extractant binding to trivalent lanthanide Er3+: Fast binding accompanied by concerted angular motions of hydration water

Solvent extraction of trivalent rare earth metal ions by organophosphorus extractants proceeds via binding of phosphoric acid headgroups to the metal ion. Water molecules in the tightly bound first hydration shell of the metal ions must be displaced by oxygen atoms from phosphoric acid headgroups. Here, we use classical molecular dynamics simulations to explore the event in which a fully hydrated Er3+ binds to its first phosphoric acid headgroup. Approach of the headgroup into the region between the first and second hydration shells leads to a fast ejection of a water molecule that is accompanied by reordering of the hydration water molecules, including discretization of their angular positions and collective rotation about the metal ion. The water molecule ejected from the first shell is located diametrically opposite from the binding oxygen. Headgroup binding places a headgroup oxygen closer to Er3+ than its first hydration shell and creates a loosely bound water that subsequently exchanges between the first shell and its environment. This second exchange of water also occurs at discrete angular positions. This geometrical aspect of binding may be of relevance to understanding the binding and transport of ion–extractant complexes that are expected to occur at the organic–aqueous liquid–liquid interface used in solvent extraction processes.

Chemistry↗

DOE OSTI2026

Spectral deconvolution without the deconvolution: Extracting temperature from x-ray Thomson scattering spectra without the source-and-instrument function

X-ray Thomson scattering (XRTS) probes the dynamic structure factor of the system, but the measured spectrum is broadened by the combined source-and-instrument function (SIF) of the setup. In order to extract properties such as temperature from an XRTS spectrum, the broadening by the SIF needs to be removed. Recent work [Dornheim et al. Nat. Commun. 13 , 7911 (2022)] has suggested that the SIF may be deconvolved using the two-sided Laplace transform. However, the extracted information can depend strongly on the shape of the input SIF, and the SIF is in practice challenging to measure accurately. Here, we propose an alternative approach: we demonstrate that considering ratios of Laplace-transformed XRTS spectra collected at different scattering angles is equivalent to performing the deconvolution, but without the need for explicit knowledge of the SIF. From these ratios, it is possible to directly extract the temperature from the scattering spectra, when the system is in thermal equilibrium. We find the method to be generally robust to spectral noise and physical differences between the spectrometers, and we explore situations in which the method breaks down. Furthermore, the fact that consistent temperatures can be extracted for systems in thermal equilibrium indicates that non-equilibrium effects could be identified by inconsistent temperatures of a few eV between the ratios of three or more scattering angles.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2021

Conceptual Design for a Blanket Tritium Extraction Test Stand

Future fusion reactors must be able to breed the tritium they will consume. Several breeding and tritium extraction technologies are under investigation internationally. PbLi is of particular interest as a breeder material. A new forced convection PbLi loop, the Tritium Extraction eXperiment (TEX), is being designed and constructed to investigate tritium extraction from PbLi. Specifically, TEX will serve to investigate the extraction efficiency of various vacuum permeator membranes and configurations. The major components of the loop include a moving magnet pump, reverse permeator, furnace test section, analysis chamber, supply tank, and plenum. As significant hazards are present in such experiments, safety is an integral focus of the experimental design.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2021

An integrated manifold learning approach for high-dimensional data feature extractions and its applications to online process monitoring of additive manufacturing

As an effective dimension reduction and feature extraction technique, manifold learning has been successfully applied to high-dimensional data analysis. With the rapid development of sensor technology, a large amount of high-dimensional data such as image streams can be easily available. Thus, a promising application of manifold learning is in the field of sensor signal analysis, particular for the applications of online process monitoring and control using high-dimensional data. The objective of this study is to develop a manifold learning-based feature extraction method for process monitoring of Additive Manufacturing (AM) using online sensor data. Due to the non-parametric nature of most existing manifold learning methods, their performance in terms of computational efficiency, as well as noise resistance has yet to be improved. To address this issue, this study proposes an integrated manifold learning approach termed multi-kernel metric learning embedded isometric feature mapping (MKML-ISOMAP) for dimension reduction and feature extraction of online high-dimensional sensor data such as images. Based on the extracted features with the utilization of supervised classification and regression methods, an online process monitoring methodology for AM is implemented to identify the actual process quality status. Finally, in the numerical simulation and real-world case studies, the proposed method demonstrates excellent performance in both prediction accuracy and computational efficiency.

36 MATERIALS SCIENCE↗

DOE OSTI2024

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning

Abstract Motivation Creating knowledge bases and ontologies is a time consuming task that relies on manual curation. AI/NLP approaches can assist expert curators in populating these knowledge bases, but current approaches rely on extensive training data, and are not able to populate arbitrarily complex nested knowledge schemas. Results Here we present Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES), a Knowledge Extraction approach that relies on the ability of Large Language Models (LLMs) to perform zero-shot learning and general-purpose query answering from flexible prompts and return information conforming to a specified schema. Given a detailed, user-defined knowledge schema and an input text, SPIRES recursively performs prompt interrogation against an LLM to obtain a set of responses matching the provided schema. SPIRES uses existing ontologies and vocabularies to provide identifiers for matched elements. We present examples of applying SPIRES in different domains, including extraction of food recipes, multi-species cellular signaling pathways, disease treatments, multi-step drug mechanisms, and chemical to disease relationships. Current SPIRES accuracy is comparable to the mid-range of existing Relation Extraction methods, but greatly surpasses an LLM’s native capability of grounding entities with unique identifiers. SPIRES has the advantage of easy customization, flexibility, and, crucially, the ability to perform new tasks in the absence of any new training data. This method supports a general strategy of leveraging the language interpreting capabilities of LLMs to assemble knowledge bases, assisting manual knowledge curation and acquisition while supporting validation with publicly-available databases and ontologies external to the LLM. Availability and implementation SPIRES is available as part of the open source OntoGPT package: https://github.com/monarch-initiative/ontogpt.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2022

SeqMask: Behavior Extraction Over Cyber Threat Intelligence Via Multi-Instance Learning

Abstract Identification and extraction of Tactics, Techniques and Procedures (TTPs) for Cyber Threat Intelligence (CTI) restore the full picture of cyber attacks and guide the analysts to assess the system risk. Existing frameworks can hardly provide uniform and complete processing mechanisms for TTPs information extraction without adequate knowledge background. A multi-instance learning approach named SeqMask is proposed in this paper as a solution. SeqMask extracts behavior keywords from CTI evaluated by the semantic impact, and predicts TTPs labels by conditional probabilities. Still, the framework has two mechanisms to determine the validity of keywords. One using expert experience verification. The other verifies the distortion of the classification effect by blocking existing keywords. In the experiments, SeqMask reached 86.07% and 73.99% in F1 scores for TTPs classifications. For the top 20% of keywords, the expert approval rating is 92.20%, where the average repetition of keywords whose scores between 100% and 90% is 60.02%. Particularly, when the top 65% of the keywords were blocked, the F1 decreased to about 50%; when removing the top 50%, the F1 was under 31%. Further, we also validate the possibility of extracting TTPs from full-size CTI and malware whose F1 are improved by 2.16% and 0.81%.

Ge, Wenhan↗

DOE OSTI2021

Advanced extraction of the deuteron charge radius from electron-deuteron scattering data

To extract the charge radius of the proton, $r_{p}$, from the electron scattering data, the PRad collaboration at Jefferson Lab has developed a rigorous framework for finding the best functional forms - the fitters - for a robust extraction of $r_{p}$ from a wide variety of sample functions for the range and uncertainties of the PRad data. In this work we utilize and further develop this framework. Herein we discuss methods for searching for the best fitter candidates as well as a procedure for testing the robustness of extraction of the deuteron charge radius, $r_{d}$, from parameterizations based on elastic electron-deuteron scattering data. The ansatz proposed in this paper for the robust extraction of $r_{d}$, for the proposed low-$Q^{2}$ DRad experiment at Jefferson Lab, can be further improved once there are more data.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2024

Extracting transition generalized parton distributions from hard exclusive pion-nucleon scattering

We study the extraction of transition generalized parton distributions (GPDs) from production of two back-to-back high transverse momentum photons ( γ γ ) and a massive pair of leptons ( ℓ + ℓ − ) in hard exclusive pion-nucleon scattering. We argue that the exclusive scattering amplitude of both processes could be factorized into nonperturbative pion distribution amplitude and nucleon transition GPDs that are convoluted with perturbatively calculable short-distance matching coefficients. We demonstrate that the exclusive diphoton production not only is complementary to the Drell-Yan-type dilepton production for extracting the GPDs but also provides enhanced sensitivities for extracting the parton momentum fraction x dependence of the GPDs. We show that both exclusive observables are physically measurable at the J-PARC and AMBER experiment energies. If the target nucleon can be polarized, corresponding spin asymmetries can offer additional sensitivities for extracting transition GPDs. Published by the American Physical Society 2024

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2026

Extraction of neutron-capture cross sections on 92 Zr using the charge-exchange Oslo method

The 93 Nb (𝑡, 3 He ) reaction at 115 MeV/nucleon was studied to demonstrate that nuclear level densities and 𝛾-ray strength functions can be extracted from charge-exchange reactions at intermediate energies using the Oslo technique. The matrix of excitation energy in 93 Zr, reconstructed from the (𝑡, 3 He ) reaction, versus the energy of 𝛾 rays emitted by the excited 93 Zr nuclei, was obtained in an experiment with the S800 Spectrograph operated in coincidence with the GRETINA 𝛾 -ray detector. The extracted level density and 𝛾 -ray strength function obtained by applying the Oslo method to this matrix were used to estimate the 92 Zr⁢(𝑛,𝛾) ⁢93 Zr cross section by combining the new results with other experimental data and theoretical calculations for 𝐸⁢1 and 𝑀⁢1 strength functions at higher energies. Good agreement with direct measurements of the 92 Zr⁢(𝑛,𝛾)⁢ 93 Zr cross section was found. The contribution from the upbend in the extracted 𝛾-ray strength function was important to achieve the consistency, as the neutron-capture cross section without this contribution is significantly below the direct measurements otherwise. Since charge-exchange reactions at intermediate energies have long been used for extracting Gamow-Teller strengths, the successful demonstration of the charge-exchange Oslo method enables experiments in which (𝑛,𝛾) cross sections and Gamow-Teller strengths can be measured simultaneously, which is of benefit for astrophysical studies.

90 ≤ A ≤ 149↗

DOE OSTI2023

DQ Admittance Model Extraction for IBRs via Gaussian Pulse Excitation

While $dq$ admittance models have shown to be very useful for stability analysis, extracting admittance models of inverter-based resources (IBRs) from the electromagnetic transient (EMT) simulation environment using frequency scans takes time. In this letter, a new perturbation method based on Gaussian pulses in combination with the system identification algorithms shows great promise for parametric $dq$ admittance model extraction. We present the $dq$ admittance model extracting method for a type-4 wind turbine. Challenges in implementing Gaussian pulse excitation are also pointed out. In conclusion, the extracted $dq$ admittance model via the new method shows to have a high matching degree with the measurements obtained from frequency scans.

24 POWER TRANSMISSION AND DISTRIBUTION↗

DOE OSTI2025

VAIM-CFF: a variational autoencoder inverse mapper solution to Compton form factor extraction from deeply virtual exclusive reactions

We develop a new methodology for extracting Compton form factors (CFFs) from deeply virtual exclusive reactions such as the unpolarized DVCS cross section using a specialized inverse problem solver, a variational autoencoder inverse mapper (VAIM). The VAIM-CFF framework not only allows us access to a fitted solution set possibly containing multiple solutions in the extraction of all 8 CFFs from a single cross section measurement, but also accesses the lost information contained in the forward mapping from CFFs to cross section. We investigate various assumptions and their effects on the predicted CFFs such as cross section organization, number of extracted CFFs, use of uncertainty quantification technique, and inclusion of prior physics information. We then use dimensionality reduction techniques such as principal component analysis to visualize the missing physics information tracked in the latent space of the VAIM framework. Through re-framing the extraction of CFFs as an inverse problem, we gain access to fundamental properties of the problem not comprehensible in standard fitting methodologies: exploring the limits of the information encoded in deeply virtual exclusive experiments.

Accelerator Physics↗

DOE OSTI2020

Automatic Building Feature Extraction Toolkit (AutoBFE) v1.0

In recent years advances in the performance of machine learning methods have considerably improved the ability to accurately extract information from images. Identification of building characteristics from imagery is an example of an application that is time consuming and costly to perform manually, and where automatic feature extraction holds great promise. A major contribution of the work conducted in this project is the provision of open, transparent, and replicable solutions for buildings features extraction from images (e.g., satellite/aerial images). In this first version of the toolkit we are focussing on extracting building footprints from satellite/aerial images using state of the art deep learning image segmentation algorithms.

Touzani, Samir↗

DOE OSTI2021

Code Artifact for: Clustering Analysis of Commercial Vehicles Using Automatically Extracted Features from Time Series Data [SWR-21-96]

This repository contains data ingestion, feature extraction, and analysis code used in NREL Technical report "Clustering Analysis of Commercial Vehicles Using Automatically Extracted Features from Time Series Data." The code is written in Python. The ETL and feature extraction code must be run in a Spark context. The analysis code can be run without Spark, provided you have pre-computed features in a CSV file. Analysis code related to the NREL Technical Report NREL/TP-2C00-74212. Includes PySpark functions to perform trip segmentation and feature extraction over big time series data in Apache Spark. Includes "domain specific" features such as Aerodynamic Speed (ft/s), Characteristic Acceleration (ft/s2), Percent Below 55 (%), Percent Zero (%), Stops Per Mile, Average Speed (mph), Maximum Speed (mph), and Speed Standard Deviation (mph). Includes Pyspark UDF to compute "domain agnostic" features using the TSFresh library. This software record also includes the analysis notebooks and code to generate the results in the previously mentioned technical report.

Perr-Sauer, Jordan↗

DOE OSTI2024

Near-complete extraction of maximum stored energy from large-core fibers using coherent pulse stacking amplification of femtosecond pulses

High field science relies on ultrashort pulse lasers with multi-joule pulse energies for studying light–matter interactions under extreme conditions and for driving particle accelerators and secondary radiation sources of x rays, gamma rays, neutrons, positrons, muons, and protons. Next-generation laser drivers will require a 10 3 -10 4 times increase in pulse repetition rates, producing multi-joule energies at multi-kilowatt average powers to enable practical applications in nuclear engineering, advanced materials, medicine, biology, homeland security, and high-energy physics. Spatially coherently combined femtosecond fiber lasers are recognized as a pathway to these next-generation drivers, with significant practical advantages including high efficiency and the possibility of compact integration. However, chirped pulse amplification in fibers is capable of extracting only a small fraction (usually ~1%) of the maximum stored energy. Here we demonstrate near-complete maximum stored energy extraction with low accumulated nonlinearity from a large-core fiber amplifier using coherent pulse stacking amplification. We have amplified a 81-pulse stacking burst in a 85 µm core chirally coupled core Yb-doped fiber, extracting up to 9.5 mJ (~90% of stored energy) with < 4.5 radians of accumulated nonlinear phase, temporally combined this burst into a single pulse, and achieved 4.2 mJ pulses of 313 fs bandwidth-limited duration after compression. This represents, to our knowledge, the highest energy extracted and compressed into a femtosecond pulse from a single fiber amplifier, enabling approximately two orders of magnitude size reduction of future high-energy coherently spatially combined fiber laser arrays.

47 OTHER INSTRUMENTATION↗

DOE OSTI2026

CHESS 2025: Crown polygons and extracted reflectance for field sampling sites

This dataset contains (1) crown polygons for each tree, meadow, and shrub site sampled in the 2025 Colorado Headwaters Ecological Spectroscopy Study (CHESS) campaign (in geojson format, .geojson) and (2) extracted reflectance, uncertainty, and shade estimates for each crown polygon from the 2018 National Ecological Observatory Network (NEON) and 2025 CHESS campaigns. (in CSV format, .csv). Additional metadata are provided in a data dictionary describing column names and definitions (dd.csv), and in a file-level metadata file (flmd.csv). Crown polygons were manually delineated for each site in the 2025 campaign using a combination of field-collected GPS data (doi:10.15485/3022418), RGB (red, green, blue) and false color reflectance mosaics (doi:10.15485/3013535), and LiDAR-derived (Light Detection and Ranging) canopy height (CHM) and digital surface (DSM) models (DOI and citation to be added upon publication). Where there was misalignment between the spectrometer- and LiDAR-derived data products, polygons prioritized alignment with the spectrometer-derived data products. Polygons were delineated conservatively to only select pixels representative of vegetation samples collected in the field. Crown polygons for 2018 are published at (doi:10.15485/1618130) and were developed using the same protocol. For each polygon, all pixels from all flightlines were extracted where the pixel centroid was contained within the polygon. For each pixel, we extracted the surface reflectance, uncertainty, and shade estimates. Details on the extracted datasets are available at (doi:10.15485/3013527, doi:10.15485/3013535). CHESS Project Description: The Colorado Headwaters Ecological Spectroscopy Study (CHESS) comprised a multi-week airborne remote sensing and field observation campaign in the Upper Gunnison Basin, Colorado, conducted in June and July of 2025. Airborne remote sensing was conducted by the National Ecological Observatory Network Airborne Observation Platform (NEON AOP), concurrent with a field campaign run by the Rocky Mountain Biological Laboratory (RMBL), the Lawrence Berkeley National Laboratory (LBNL) and SLAC National Accelerator Laboratory Watershed Function Science Focus Area (SFA), and NASA-JPL (Jet Propulsion Laboratory) Earth Surface Mineral Dust Source Investigation (EMIT) program. Between June 10 and July 18, 2025, the NEON AOP flight team collected high-resolution aerial imaging spectroscopy and Light Detection and Ranging (LiDAR) data over three domains: the Upper East River (CRBU), Almont Triangle (ALMO), and the Upper Taylor Basin (UPTA). In coordination with the flights, a field campaign acquired ground-truth observations, including observations of vegetation composition, foliar traits, forest demography, and subsurface properties in 18 core sampling areas within the domains. Additional surface water observations were taken at over 380 point locations. All CHESS campaign datasets can be found within the CHESS ESS-DIVE data portal: https://data.ess-dive.lbl.gov/portals/chess. Funding Acknowledgment: This research was carried out at the Jet Propulsion Laboratory, California Institute of Technology, under a contract with the National Aeronautics and Space Administration (80NM0018D0004) and was funded by EMIT Extended Mission Phase E Science.

2018 NEON and 2025 CHESS Campaigns↗

DOE OSTI2025

An extraction scheme for future CEBAF FFA based energy upgrade

Jefferson lab is considering an energy increase from current 12 GeV to 22 GeV for its CEBAF accelerator. This will be accomplished by recirculating 5-6 additional turns through two parallel CEBAF LINACs using an FFA arc at each end of the racetrack. The total recirculation turns would be 10 times, the first four turns use present conventional arcs to make the 180-degree bends from one LINAC to the other. However, the last 5-6 turns will all share a single beam line inside two FFA arcs. This reduces the footprint and the cost of the project significantly. On the other hand, having the trajectories of last 5-6 recirculating beams close to each other makes it challenging to extract beams from different passes with different energies. In this paper we will explain our present extraction system for 12 GeV, our challenges and limitations, and a possible extraction solution for the 22 GeV upgrade with the goal of extracting beam at different turns/energies to different experimental halls.

Accelerator Physics↗

DOE OSTI2021

Microfluidic Liquid-Liquid Extraction Chip with Integrated Raman Sensors (Phase I and Phase II Final Report)

As demand for electricity continues to increase worldwide, the world’s nuclear power generating capacity will continue to grow. Nuclear power is the most environmentally benign way of producing electricity on a large scale. The long-term successful use of nuclear power, however, is critically dependent upon adequate and safe processing and disposal of spent nuclear fuels. A very important feature of nuclear energy is that spent fuels can be reprocessed to recover fissile and fertile materials that can then be used as fresh fuel for nuclear power plants. The DOE-NE Fuel Cycle Research and Development (FCR&D) is currently developing nuclear material reprocessing technologies. In a typical nuclear fuel reprocessing system, centrifugal contactors are used as liquid-liquid extraction devices where two immiscible liquids are mixed at high speeds using a rotor, which creates a fine dispersion of droplets of organic phase in an aqueous phase that contains the analyte. Understanding the extraction efficiency at these contactors through modeling and simulation is important in the development of reprocessing technologies and the optimization of current technologies such as the PUREX process. The outcome of this program will be a liquid-liquid microfluidic flow cell chip with embedded spectroscopic sensors for the analysis of extracted analytes. This device will be useful in the optimization of new fuel reprocessing schemes as well as existing reprocessing processes by providing a microfluidic modeling platform to optimize extraction parameters. The Phase I and Phase II work developed a microfluidic chip design that allows integration of Raman and absorption fiber optic probes and successfully demonstrated the feasibility of using Raman and absorption probes to detect key analytes that partition into the aqueous and organic phases.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

DOE OSTI2021

Extraction, Scrub, and Strip Test Results for the Salt Waste Processing Facility Sample Tank 202

An Extraction, Scrub, and Strip (ESS) test was performed on a sample from Tank-202. The purpose of testing this sample is to determine if the solvent is displaying the correct extraction and stripping behavior with cesium. The ESS test showed acceptable performance of the solvent for extraction, scrub, and strip operations. The extraction D(Cs) measured 14.2, exceeding the required value of 8. This value is consistent with results from previous ESS tests using similar solvent formulations. Similarly, the strip cesium distribution ratios fell within acceptable ranges.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗