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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 289 records · Page 16

Previous exposure to Spike-providing parental strains confers neutralizing immunity to XBB lineage and other SARS-CoV-2 recombinants in the context of vaccination

The emergence of SARS-CoV-2 recombinants is of particular concern as they can result in a sudden increase in immune evasion due to antigenic shift. Recent recombinants XBB and XBB.1.5 have higher transmissibility than previous recombinants such as “Deltacron.” We hypothesized that immunity to a SARS-CoV-2 recombinant depends on prior exposure to its parental strains. To test this hypothesis, we examined whether Delta or Omicron (BA.1 or BA.2) immunity conferred through infection, vaccination, or breakthrough infection could neutralize Deltacron and XBB/XBB.1.5 recombinants. We found that Delta, BA.1, or BA.2 breakthrough infections provided better immune protection against Deltacron and its parental strains than did the vaccine booster. None of the sera were effective at neutralizing the XBB lineage or its parent BA.2.75.2, except for the sera from the BA.2 breakthrough group. These results support our hypothesis. In turn, our findings underscore the importance of multivalent vaccines that correspond to the antigenic profile of circulating variants of concern and of variant-specific diagnostics that may guide public health and individual decisions in response to emerging SARS-CoV-2 recombinants.

59 BASIC BIOLOGICAL SCIENCES↗

Embedding thermocouples in SS316 with laser powder bed fusion

Recent advances in manufacturing technologies have enabled the fabrication of complex geometries for a wide range of applications, including the energy, aerospace, and civil sectors. The ability to integrate sensors at critical locations within these complex components during the manufacturing process could benefit process monitoring and control by reducing reliance on models to relate surface measurements to internal phenomena. This study investigated embedding thermocouples in a SS316 matrix using laser powder bed fusion. Under optimal processing conditions, embedded thermocouples were characterized post-building, finding good bonding to the matrix with no melt pool penetration to the sensing elements. Futher, the embedded thermocouple performed similarly to an identical non-embedded thermocouple during thermal testing to 500 °C with only a slight difference in response time, which was attributed to the differences in mass and the associated thermal time constants.

image analysis↗

Larmor power limit for cyclotron radiation of relativistic particles in a waveguide

Cyclotron radiation emission spectroscopy (CRES) is a modern technique for high-precision energy spectroscopy, in which the energy of a charged particle in a magnetic field is measured via the frequency of the emitted cyclotron radiation. The He6-CRES collaboration aims to use CRES to probe beyond the standard model physics at the TeV scale by performing high-resolution and low-background beta-decay spectroscopy of 6 He and 19 Ne. Having demonstrated the first observation of individual, high-energy (0.1–2.5 MeV) positrons and electrons via their cyclotron radiation, the experiment provides a novel window into the radiation of relativistic charged particles in a waveguide via the time-derivative (slope) of the cyclotron radiation frequency, df c /dt. We show that analytic predictions for the total cyclotron radiation power emitted by a charged particle in circular and rectangular waveguides are approximately consistent with the Larmor formula, each scaling with the Lorentz factor of the underlying e ± as γ 4 . This hypothesis is corroborated with experimental CRES slope data.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Solitary wave solutions of the 2+1 and 3+1 dimensional nonlinear Dirac equation constrained to planar and space curves

Here, we study the effect of curvature and torsion on the solitons of the nonlinear Dirac equation considered on planar and space curves. Since the spin connection is zero for the curves considered here, the arc variable provides a natural setting to understand the role of curvature. We obtain for various curves in two and three dimensions the transformation of the Dirac equation to the 1 + 1 dimensional flat space Dirac equation written in terms of the arc length. Depending on the curvature, the soliton profile either narrows or expands. Our results may be applicable to yet-to-be-synthesized curved quasi-one dimensional Bose condensates.

97 MATHEMATICS AND COMPUTING↗

Stability of exact solutions of the (2 + 1)-dimensional nonlinear Schrödinger equation with arbitrary nonlinearity parameter κ

In this work, we consider the nonlinear Schrödinger equation (NLSE) in 2+1 dimensions with arbitrary nonlinearity exponent κ in the presence of an external confining potential. Exact solutions to the system are constructed, and their stability as we increase the 'mass' (i.e., the L 2 norm) and the nonlinearity parameter κ is explored. Here we observe both theoretically and numerically that the presence of the confining potential leads to wider domains of stability over the parameter space compared to the unconfined case. Our analysis suggests the existence of a stable regime of solutions for all κ as long as their mass is less than a critical value M*(κ). Furthermore, we find that there are two different critical masses, one corresponding to width perturbations and the other one to translational perturbations. The results of Derrick's theorem are also obtained by studying the small amplitude regime of a four-parameter collective coordinate (4CC) approximation. A numerical stability analysis of the NLSE shows that the instability curve M*(κ) versus κ lies below the two curves found by Derrick's theorem and the 4CC approximation. In the absence of the external potential, κ = 1 demarcates the separation between the blowup regime and the stable regime. In this 4CC approximation, for κ < 1, when the mass is above the critical mass for the translational instability, quite complicated motions of the collective coordinates are possible. Energy conservation prevents the blowup of the solution as well as confines the center of the solution to a finite spatial domain. We call this regime the 'frustrated' blowup regime and give some illustrations. In an appendix, we show how to extend these results to arbitrary initial ground state solution data and arbitrary spatial dimension d.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

A solvable model of a nonlinear extension of quantum mechanics

We introduce a particular nonlinear generalization of quantum mechanics which has the property that it is exactly solvable in terms of the eigenvalues and eigenfunctions of the Hamiltonian of the usual linear quantum mechanics problem. Here, we hope that this simple example will elucidate some of the issues of interpreting nonlinear generalization of quantum mechanics that have been put forth to resolve questions about quantum measurement theory.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

NSTX-U theory, modeling and analysis results

Here, the mission of the low aspect ratio spherical tokamak NSTX-U is to advance the physics basis and technical solutions required for optimizing the configuration of next-step steady-state tokamak fusion devices. NSTX-U will ultimately operate at up to 2 MA of plasma current and 1 T toroidal field on axis for 5 s, and has available up to 15 MW of neutral beam injection power at different tangency radii and 6 MW of high harmonic fast wave heating. With these capabilities NSTX-U will develop the physics understanding and control tools to ramp-up and sustain high performance fully non-inductive plasmas with large bootstrap fraction and enhanced confinement enabled via the low aspect ratio, high beta configuration. With its unique capabilities, NSTX-U research also supports ITER and other critical fusion development needs. Super-Alfvénic ions in beam-heated NSTX-U plasmas access energetic particle (EP) parameter space that is relevant for both α-heated conventional and low aspect ratio burning plasmas. NSTX-U can also generate very large target heat fluxes to test conventional and innovative plasma exhaust and plasma facing component solutions. This paper summarizes recent analysis, theory and modelling progress to advance the tokamak physics basis in the areas of macrostability and 3D fields, EP stability and fast ion transport, thermal transport and pedestal structure, boundary and plasma material interaction, RF heating, scenario optimization and real-time control.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Effect of controlled magnetic island bifurcation on electron diffusion

Magnetic islands strongly influence cross-field electron transport in magnetized plasmas. In particular, bifurcations of the island topology modify the number and location of O-points, X-points, and separatrix boundaries, thereby altering diffusion pathways. In recent DIII-D experiments, external magnetic perturbations were used to rotate and periodically bifurcate the island on the q = 2 surface, causing a switchback between a q = 2/1-dominated structure and a narrower q = 4/2-dominated structure. To investigate how this topological change affects electron transport, we employ the field line tracing code TRIP3D with an implemented collisional operator. Thermal, tracer electrons launched from O-points, X-points, and outside separatrix boundaries reveal distinct diffusion regimes, including classical, subdiffusive, and superdiffusive behavior, depending on both the dominant island mode and launch location. These results suggest that island bifurcation can alter electron diffusion across rational surfaces, with direct implications for particle confinement. While the present work emphasizes diffusion as a general framework, the findings provide insight into the conditions under which electron trapping into an island or stochastization of the island's separatrix can enable additional mechanisms, such as the generation of energetic electrons.

DIII-D↗

Seasonal variability and predictability of monsoon precipitation in Southern Africa

Rainfed agriculture is the mainstay of economies across Southern Africa (SA), where most precipitation is received during the austral summer monsoon. This study aims to further our understanding of monsoon precipitation predictability over SA. We use three natural climate forcings, El Niño–Southern Oscillation, Indian Ocean Dipole (IOD), and the Indian Ocean Precipitation Dipole (IOPD)—the dominant precipitation variability mode—to construct an empirical model that exhibits significant skill over SA during monsoon in explaining precipitation variability and in forecasting it with a five-month lead. While most explained precipitation variance (50%–75%) comes from contemporaneous IOD and IOPD, preconditioning all three forcings is key in predicting monsoon precipitation with a zero to five-month lead. Seasonal forecasting systems accurately represent the interplay of the three forcings but show varying skills in representing their teleconnection over SA. This makes them less effective at predicting monsoon precipitation than the empirical model.

54 ENVIRONMENTAL SCIENCES↗

Parametrically driven nonlinear Dirac equation with arbitrary nonlinearity

Here, the damped and parametrically driven nonlinear Dirac equation with arbitrary nonlinearity parameter $\kappa$ is analyzed, when the external force is periodic in space and given by $\mathcal{f(x) = r}$ cos(Kx), both numerically and in a variational approximation using five collective coordinates (time dependent shape parameters of the wave function). Our variational approximation satisfies exactly the low-order moment equations. Because of competition between the spatial period of the external force λ = 2π/K , and the soliton width $l_s$, which is a function of the nonlinearity $\kappa$ as well as the initial frequency ω 0 of the solitary wave, there is a transition (at fixed ω 0 ) from trapped to unbound behavior of the soliton, which depends on the parameters $\mathcal{r}$ and K of the external force and the nonlinearity parameter $\kappa$. We previously studied this phenomena when $\kappa$ = 1 where we showed that for λ $\gg l_s$ the soliton oscillates in an effective potential, while forλ $\ll l_s$ it moves uniformly as a free particle. In this paper we focus on the $\kappa$ dependence of the transition from oscillatory to particle behavior and explicitly compare the curves of the transition regime found in the collective coordinate approximation as a function of $\mathcal{r}$ and K when $\kappa$ = 1/2,1,2 at fixed value of the frequency ω 0 . Since the solitary wave gets narrower for fixed ω 0 as a function of $\kappa$, we expect and indeed find that the regime where the solitary wave is trapped is extended as we increase $\kappa$.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Stability and response of trapped solitary wave solutions of coupled nonlinear Schrödinger equations in an external, $\mathcal{PT}$- and supersymmetric potential

In this work, we present trapped solitary wave solutions of a coupled nonlinear Schrödinger (NLS) system in 1 + 1 dimensions in the presence of an external, supersymmetric and complex $\mathcal{PT}$-symmetric potential. The Schrödinger system this work focuses on possesses exact solutions whose existence, stability, and spatio-temporal dynamics are investigated by means of analytical and numerical methods. Two different variational approximations are considered where the stability and dynamics of the solitary waves are explored in terms of eight and twelve time-dependent collective coordinates (CCs). We find regions of stability for specific potential choices as well as analytic expressions for the small oscillation frequencies in the CC approximation. Our findings are further supported by performing systematic numerical simulations of the NLS system.

97 MATHEMATICS AND COMPUTING↗

Behavior of solitary waves of coupled nonlinear Schrödinger equations subjected to complex external periodic potentials with odd-$\mathcal{PT}$ symmetry

In this work, we discuss the response of both moving and trapped solitary wave solutions of a two-component nonlinear Schrödinger system in 1 + 1 dimensions to an odd-$\mathcal{PT}$ external periodic complex potential. The dynamical behavior of perturbed solitary waves is explored by conducting numerical simulations of the nonlinear system and using a collective coordinate variational approximation. We present case examples corresponding to choices of parameter values and initial conditions involved therein. The results of the collective coordinate approximation are compared against numerical simulations where we observe qualitatively good agreement between the two. Unlike the case for a single-component solitary wave in a complex periodic $\mathcal{PT}$-symmetric potential, the collective coordinate equations do not have a small oscillation regime, and initially the height of the two components changes in opposite directions often causing instability. We find that the dynamic stability criteria we have used in the one-component case are a good indicator for the onset of dynamic instabilities in the present setup.

97 MATHEMATICS AND COMPUTING↗

Stability of trapped solutions of a nonlinear Schrödinger equation with a nonlocal nonlinear self-interaction potential

This work focuses on the study of the stability of trapped soliton-like solutions of a (1 + 1)-dimensional nonlinear Schrödinger equation (NLSE) in a nonlocal, nonlinear, self-interaction potential of the form [|Ψ(x,t)| 2 +|Ψ(-x,t)| 2 ] κ where κ is an arbitrary nonlinearity parameter. Although the system with κ = 1 (i.e. fully integrable case) was first reported by Yang (2018 Phys. Rev. E 98 042202), here in the present work, we extend this model to the one in which κ is arbitrary. This allows us to compare the stability properties of the now trapped solutions to previously found solutions of the more usual NLSE with κ ≠ 1 which are moving soliton solutions. We show that there is a simple, one-component, nonlocal Lagrangian and corresponding action governing the dynamics of the system. Using a collective coordinate method derived from the action as well as assuming the validity of Derrick's theorem, we find that these trapped solutions are stable for 0 < κ < 2 and unstable when κ > 2. At the critical value of κ, i.e. κ = 2, the solution can either collapse or blowup linearly in time when q 0 = 0, where q 0 is the center of the initial density ρ(x, t = 0) = ψ*ψ of the solution. For q 0 ≠ 0 the displaced solution collapses. When κ > 2 initial small displacements from the origin also lead to collapse of the wave function. This phenomenon is not seen in the usual NLSE.

collective coordinates↗

Hosting downscaled decision-relevant community data products in ESGF2-US

As regionally-relevant high-resolution Earth system data is increasingly relied upon across scientific, policy, and practitioner communities, there is an urgent need for coordinated and federated infrastructure to store, manage, standardize, and distribute decision-relevant community data products. Substantial effort is required to ensure that these products, which are often critical for regional impact assessments and decision-making, are findable, accessible, interoperable, and reusable. The Earth System Grid Federation US project (ESGF2-US) is addressing this challenge by expanding its open-source, distributed platform to support the hosting and dissemination of downscaled Earth system datasets. This expansion includes aligning new downscaled datasets with developing community standards for metadata and file structure, consistent with existing ESGF archives. This includes ensuring CF-compliance, applying CMORization where appropriate, and developing tools to streamline user access. In this paper, we highlight the technical and coordination work required to bring downscaled data into ESGF2-US and aim to inform the broader Earth system data user community about the growing availability and utility of these curated resources.

ESGF↗

Inexact Newton-CG algorithms with complexity guarantees

Abstract We consider variants of a recently developed Newton-CG algorithm for nonconvex problems (Royer, C. W. & Wright, S. J. (2018) Complexity analysis of second-order line-search algorithms for smooth nonconvex optimization. SIAM J. Optim., 28, 1448–1477) in which inexact estimates of the gradient and the Hessian information are used for various steps. Under certain conditions on the inexactness measures, we derive iteration complexity bounds for achieving $\epsilon $-approximate second-order optimality that match best-known lower bounds. Our inexactness condition on the gradient is adaptive, allowing for crude accuracy in regions with large gradients. We describe two variants of our approach, one in which the step size along the computed search direction is chosen adaptively, and another in which the step size is pre-defined. To obtain second-order optimality, our algorithms will make use of a negative curvature direction on some steps. These directions can be obtained, with high probability, using the randomized Lanczos algorithm. In this sense, all of our results hold with high probability over the run of the algorithm. We evaluate the performance of our proposed algorithms empirically on several machine learning models. Our approach is a first attempt to introduce inexact Hessian and/or gradient information into the Newton-CG algorithm of Royer & Wright (2018, Complexity analysis of second-order line-search algorithms for smooth nonconvex optimization. SIAM J. Optim., 28, 1448–1477).

Mathematics↗

Large-scale deep learning for metastasis detection in pathology reports

Objectives No existing algorithm can reliably identify metastasis from pathology reports across multiple cancer types and the entire US population. In this study, we develop a deep learning model that automatically detects patients with metastatic cancer by using pathology reports from many laboratories and of multiple cancer types. Materials and Methods We use 60 471 unstructured pathology reports from 4 Surveillance, Epidemiology, and End Results (SEER) registries. The reports were coded into 1 of 3 labels: metastasis negative, metastases positive, or metastasis undetermined. We utilize a task-specific deep neural network trained from scratch and compare its performance with a widely used large language model (LLM). Results Our deep learning architecture trained on task-specific data outperforms a general-purpose LLM, with a recall of 0.894 compared to 0.824. We quantified model uncertainty and used it to defer reports for human review. We found that retaining 72.9% of reports increased recall from 0.894 to 0.969. Discussion A smaller deep learning architecture trained on task-specific data outperforms a general LLM. Equally critical to model performance is the incorporation of uncertainty quantification, achieved here through an abstention mechanism. Conclusions This study’s finding demonstrate the feasibility of developing algorithms to automatically identify metastatic cancer cases from unstructured pathology reports.

machine learning↗

BOSS quasar outflows traced by C iv

ABSTRACT We investigate possible factors that drive fast quasar outflows using a sample of 39 249 quasars at median redshift 〈z〉 ≈ 2.17. Unique to this study, the quasar redshifts are re-measured based on the Mg ii emission line, and explore unprecedented outflow velocities (>6000 km s−1), while maintaining statistical significance. We measure reliable C iv blueshifts for 1178 quasars with velocities >2500 km s−1. From those, 255(13) quasars have blueshifts above 4000(6000) km s−1, with the highest C iv velocity ≈7000 km s−1. Several correlations are observed, where higher C iv blueshifts in general are in quasars with broader, weaker C iv emission profiles, weak He ii emission, larger Eddington ratios, and bluer ultraviolet (UV) continuum slope across the rest-frame UV to near-infrared. Analysis reveals two primary factors contributing to faster outflows: higher Eddington ratios, and softer far-UV continuum (hν >24.6 eV). We find supporting evidence that radiative line driving may generate extreme outflow velocities, influenced by multiple factors as suggested by the aforementioned correlations. This evidence highlights the importance of considering a multidimensional parameter space in future studies when analyzing large C iv blueshifts to determine the fundamental causes of outflows.

Gillette, Jarred (ORCID:0000000185284839)↗

The DYRKP1 kinase regulates cell wall degradation in Chlamydomonas by inducing matrix metalloproteinase expression

Abstract The cell wall of plants and algae is an important cell structure that protects cells from changes in the external physical and chemical environment. This extracellular matrix, composed of polysaccharides and glycoproteins, must be constantly remodeled throughout the life cycle. However, compared to matrix polysaccharides, little is known about the mechanisms regulating the formation and degradation of matrix glycoproteins. We report here that a plant kinase belonging to the dual-specificity tyrosine phosphorylation-regulated kinase (DYRKP1) family present in all eukaryotes regulates cell wall degradation after mitosis of Chlamydomonas reinhardtii by inducing the expression of matrix metalloproteinases. Without DYRKP1, daughter cells cannot disassemble parental cell walls and remain trapped inside for more than 10 days. On the other hand, the dual-specificity tyrosine phosphorylation-regulated kinase complementation lines show normal degradation of the parental cell wall. Transcriptomic and proteomic analyses indicate a marked downregulation of MMP gene expression and accumulation, respectively, in the dyrkp1 mutants. The mutants deficient in matrix metalloproteinases retain palmelloid structures for a longer time than the background strain, like dyrkp1 mutants. Our findings show that dual-specificity tyrosine phosphorylation-regulated kinase, by ensuring timely MMP expression, enables the successful execution of the cell cycle. Altogether, this study provides insight into the life cycle regulation in plants and algae.

Kim, Minjae (ORCID:0000000223561295)↗