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At least 289 records · Page 16

Population‐level gene expression can repeatedly link genes to functions in maize

SUMMARY Transcriptome‐wide association studies (TWAS) can provide single gene resolution for candidate genes in plants, complementing genome‐wide association studies (GWAS) but efforts in plants have been met with, at best, mixed success. We generated expression data from 693 maize genotypes, measured in a common field experiment, sampled over a 2‐h period to minimize diurnal and environmental effects, using full‐length RNA‐seq to maximize the accurate estimation of transcript abundance. TWAS could identify roughly 10 times as many genes likely to play a role in flowering time regulation as GWAS conducted data from the same experiment. TWAS using mature leaf tissue identified known true‐positive flowering time genes known to act in the shoot apical meristem, and trait data from a new environment enabled the identification of additional flowering time genes without the need for new expression data. eQTL analysis of TWAS‐tagged genes identified at least one additional known maize flowering time gene through trans ‐eQTL interactions. Collectively these results suggest the gene expression resource described here can link genes to functions across different plant phenotypes expressed in a range of tissues and scored in different experiments.

Torres‐Rodríguez, J. Vladimir↗

Analysis of coronal H I Lyman alpha measurements from a rocket flight on 1979 April 13

It is noted that measurements of the profiles of resonantly scattered hydrogen Lyman-alpha coronal radiation have been used in determining hydrogen kinetic temperatures from 1.5 to 4 solar radii from sun center in a quiet region of the corona. Proton temperatures derived using the line widths decrease with height from 2.6 x 10 to the 6th K at 1.5 solar radii to 1.2 x 10 to the 6th K at 4 solar radii. These measurements, together with temperatures for lower heights determined from earlier Skylab and eclipse data, suggest that there is a maximum in the quiet coronal proton temperature at about 1.5 solar radii. Comparison of measured Lyman-alpha intensities with those calculated using a representative model for the radial variation of the coronal electron density yields information on the magnitude of the electron temperature gradient and suggests that the solar wind flow was subsonic for distances less than 4 solar radii.

Withbroe, G. L.↗

Time variability of solar active regions at centimeter wavelengths

An analysis is presented of the variability of centimeter wavelength emission originating from the solar transition region and lower corona, and the variability is compared with the sun's quiescent emission. Sequential dual wavelength observations are presented and used to put constraints on a possible model of the variability of active region emissions and to better understand the dynamics of active regions. It is shown that gyroresonance emission contributes significantly to the active region emission at 6 cm, whereas all the quiet-sun emission can be attributed to free-free emission. From comparison of the quiet-sun and active region models, it is shown that the density at the base of the transition region is higher in active regions.

Shevgaonkar, R. K.↗

Coronagraphic observations and analyses of the ultraviolet solar corona

This status report for the period 1 October 1992 to 30 September 1994 covers the final preparation and first observations with the Spartan Ultraviolet Coronal Spectrometer on Spartan 201-1, and the preparation and second flight for Spartan 201-2. Both flights were fully successful and resulted in high quality spectroscopic observations of the extended solar corona out to 3.5 solar radii from Sun-center. The primary focus of this report is the results from Spartan 201-1. There is also a brief description of the evaluation of the quick look data from the second flight. Highlights from the first flight include a discovery that the proton velocity distribution in coronal holes is complex and consists of a central core with elevated high velocity wings compared to a Gaussian shape.

Kohl, John L.↗

A New View of the Origin of the Solar Wind

This paper uses white-light measurements made by the SOHO LASCO coronagraph and HAO Mauna Loa Mk III K-coronameter to illustrate the new view of solar wind structure deduced originally from radio occultation measurements.

solar↗

The distant future of solar activity: A case study of Beta Hydri. III - Transition region, corona, and stellar wind

The paper investigates the secular decay of solar-type activity through a detailed comparison of the present sun with the very old solar-type star, Beta Hyi, taken as a proxy of the future sun. Analyses of successive atmospheric layers are presented, with emphasis of the outermost parts. The FUV emission lines for the transition zone are among the faintest so far seen in any solar-type star. The coronal soft X-ray spectrum was measured through different filters on EXOSAT and compared to simulated X-ray observations of the sun seen as a star. The flux from Beta Hyi is weaker than that from the solar corona and has a different spectrum. It is inferred that a thermally driven stellar wind can no longer be supported, which removes the mechanism from further rotational braking of the star through a magnetic stellar wind.

Dravins, D.↗

Physical Properties of a Coronal Hole from a Coronal Diagnostics Spectrometer, Mauna Loa Coronagraph, and LASCO Observations during the Whole Sun Month

Until recently, inference of electron density distribution in the solar corona was limited by the field of view of white-light coronagraphs (typically out to 6 Rs). Now, for the first time we have a series of white- light coronagraphs (SOHO/LASCO) whose combined field of view extends from 1.1 - 30 Rs. Quantitative information on electron density distribution of coronal hole and coronal plumes/rays are estimated by using white-light, polarized brightness (pB) observations from the SOHO/LASCO/C2 and C3 and HAO/Mauna Loa Mark III coronagraphs from 1.15 to 8.0 Rs. Morphological information on the boundary of the polar coronal hole and streamer interface is determined from the white-light observations in a manner similar to the Skylab polar coronal hole boundary estimate. The average coronal hole electron density in the region 1 - 1.15 Rs is estimated from the density-sensitive EUV line ratios of Si IX 3501342 A observed by the SOHO/coronal diagnostic spectrometer (CDS). We combine these numbers with the estimate from white-light (WL) observations to obtain a density profile from 1 to 8 Rs for the plumes and the polar coronal hole. We find that white light and spectral analysis produce consistent density information. Extrapolated densities inferred from SOHO observations are compared to Ulysses in situ observations of density. Like the density inferred from the Spartan 201-03 coronagraph, the current SOHO density profiles suggest that the acceleration of the fast solar wind takes place very close to the Sun, within 10-15 Rs. The density information is used to put constraints on solar wind flow velocities and effective temperatures. Finally, these results are compared to the recent analysis of the Spartan 201-03 white-light observations.

Guhathakurta, M.↗

Dynamic phenomena in coronal flux tubes

The study of stellar atmospheres and the determination of specific physical mechanisms, geometries, and magnetic structures by which coronae are maintained is examined. Ultraviolet and soft X-ray components observed in the radiative output of cool stars and the Sun require counterentropic temperature gradients for their explanation. The existence of a hot corona is recognized as a result of mechanical or fluid dynamic effects and the importance of the magnetic field in the heating is accepted. Magnetohydrodynamic energy release associated with the emergence of magnetic flux through the chromosphere and its dynamic readjustment in the corona are major counterentropic phenomena which are considered as primary candidates for corona heating. Systematic plows in coronal flux tubes result from asymmetric heating and systematic flows can exist without substantial chromospheric pressure differences.

Mariska, J. T.↗

The Solar Wind

Parker's model of a spherically expanding corona, the "solar wind," is compared with D. E. Blackwell's observations of the 1954 minimum equatorial corona. A significant discrepancy is found between the predicted and the observed electron densities at distances from the sun greater than 20 solar radii. Blackwell's data are found to be consistent with a model in which the corona expands mostly within a disk less than 25 solar radii thick, lying within the sun's equatorial plane. The thickness of the disk as a function of distance from the sun is qualitatively explained in terms of magnetic pressure. The solar wind is found to have a considerable effect on the lunar atmosphere. First, the calculated density of the lunar atmosphere is greatly reduced by collisions with protons in the solar wind. If the flux of particles in this wind has the conventional values ranging between 10(exp 10) to 10(exp 11) per sq cm-sec, the calculations yield a lunar pressure of 10(exp -13) atmosphere of argon, in agreement with the value predicted by Elsmore and Whitfield on the basis of observations on the occultation of radio stars. Second, following a suggestion by Gold, it was found that the collisions of solar-wind protons with the lunar surface produce an atmosphere of cold neutral hydrogen with a density of 10(exp 5) per cu cm at the lunar surface. The density falls off at greater distances in accordance with the inverse-square law. Estimates indicate that the interaction of solar particles with the neutral hydrogen will produce an extended lunar ionosphere with a density of the order of 400 protons/cu cm in the vicinity of the moon.

Herring, J. R.↗

The coronal field lines of an evolving bipolar magnetic region

A simple potential field model is presented to illustrate that loops of magnetic flux rise upward through the corona during the relatively short growth phase of a bipolar magnetic region but contract back to the sun's surface during the much longer decay phase of the photospheric region. To reconcile this behavior with the unidirectional, solar-wind-driven convection of flux outward from the sun, one must postulate the existence of an X-type neutral line in the middle corona where open field lines can be converted back to closed ones.

Sheeley, N. R., Jr.↗

Starprobe - The science opportunities

The scientific objectives of the NASA Starprobe mission for an unmanned spacecraft to pass within three solar radii of the sun's surface are reviewed. Fundamental observations of gravitation, relativity, and factors related to the solar interior, measurements of the static and dynamic electromagnetic fields and the particle populations close to the sun, and observations of the solar atmosphere from the photosphere to the corona with high spatial resolution would be possible with the Starprobe. A determination of the quadrupole coefficient in the expansion of the gravitational potential field of the sun is noted to be possible by measuring the departure from a Keplerian orbit of the Starprobe as it passes perihelion, yielding data on the rate of revolution of the interior of the sun. Further information on shock acceleration, energy losses, radio bursts, interplanetary propagation, and diffusion will be available at 10-60 solar radii.

Underwood, J. H.↗

Solar Activity Modeling: From Subgranular Dynamical Scales to the Solar Cycles

Dynamical effects of solar magnetoconvection span a wide range spatial and temporal scales that extends from the interior to the corona and from fast turbulent motions to the global-Sun magnetic activity. To study the solar activity on short temporal scales (from minutes to hours), we use 3D radiative MHD simulations that allow us to investigate complex turbulent interactions that drive various phenomena, such as plasma eruptions, spontaneous formation of magnetic structures, funnel-like structures and magnetic loops in the corona, and others. In particular, we focus on multi-scale processes of energy exchange across the different layers, which contribute to the corona heating and eruptive dynamics, as well as interlinks between different layers of the solar interior and atmosphere. For modeling the global-scale activity we use the data assimilation approach that has demonstrated great potential for building reliable long-term forecasts of solar activity. In particular, it has been shown that the Ensemble Kalman Filter (EnKF) method applied to the Parker-Kleeorin-Ruzmakin dynamo model is capable of predicting solar activity up to one sunspot cycle ahead in time, as well as estimating the properties of the next cycle a few years before it begins. In this presentation, using the available magnetogram data, we discuss development of the methodology and forecast quality criteria (including forecast uncertainties and sources of errors). We demonstrate the influence of observational limitation on the prediction accuracy. We present the EnKF predictions of the upcoming Solar Cycle 25 based on both the sunspot number series and observed magnetic fields, and discuss the uncertainties and potential of the data assimilation approach for modeling and forecasting the solar activity.

Kitiashvili, I. N.↗

The magnetic non-equilibrium of buoyant flux tubes in the solar corona

The magnetic field in the convection zone and photosphere of the sun exists mostly as concentrated tubes of magnetic flux. It is, therefore, necessary to study the basic properties of magnetic flux tubes to obtain a basis for understanding the behavior of the sun's magnetic field. The present investigation is concerned with the global equilibrium shape of a flux tube in the stratified solar atmosphere. A fundamental property of isolated flux tubes is magnetic buoyancy. Attention is given to flux tubes with external field, and twisted flux tubes. It is shown that the analysis of Parker (1975, 1979) and Spruit (1981) for calculating the equilibrium of a slender flux tube in a stratified atmosphere may be extended to more general situations. The slender tube approximation provides a method of solving the problem of modeling the overall curvature of flux tubes. It is found that for a twisted flux tube, there can be two possible equilibrium values of the height.

Browning, P. K.↗

Probing the Energetic Particle Environment near the Sun

NASA’s Parker Solar Probe mission1 recently plunged through the inner heliosphere of the Sun to its perihelia, about 24 million kilometres from the Sun. Previous studies farther from the Sun (performed mostly at a distance of 1 astronomical unit) indicate that solar energetic particles are accelerated from a few kiloelectronvolts up to near-relativistic energies via at least two processes: ‘impulsive’ events, which are usually associated with magnetic reconnection in solar flares and are typically enriched in electrons, helium-3 and heavier ions2, and ‘gradual’ events3,4, which are typically associated with large coronal-mass-ejection-driven shocks and compressions moving through the corona and inner solar wind and are the dominant source of protons with energies between 1 and 10 megaelectronvolts. However, some events show aspects of both processes and the electron–proton ratio is not bimodally distributed, as would be expected if there were only two possible processes5. These processes have been very difficult to resolve from prior observations, owing to the various transport effects that affect the energetic particle population en route to more distant spacecraft6. Here we report observations of the near-Sun energetic particle radiation environment over the first two orbits of the probe. We find a variety of energetic particle events accelerated both locally and remotely including by corotating interaction regions, impulsive events driven by acceleration near the Sun, and an event related to a coronal mass ejection. We provide direct observations of the energetic particle radiation environment in the region just above the corona of the Sun and directly explore the physics of particle acceleration and transport.

D J Mccomas↗

Heating and acceleration of the solar wind

The dynamics of the expanding corona are discussed emphasizing the physical processes which accelerate the plasma as it flows away from the Sun. The solar wind plays a dominant role in the energy balance of the part of the corona in which it originates. The wind acceleration processes, in large part, with the mechanisms that transport energy to the corona in the first place.

Kopp, R. A.↗

Simulation of the magnetic structure of the inner heliosphere by means of non-spherical source surface

A new method for mapping the Sun's magnetic field B from the photosphere through the corona and interplanetary space is presented. The method entails the derivation of B from a scalar potential within a current-free annular volume bounded inside by photosphere and outside by a prescribed nonspherical source surface to which B is made (as nearly as possible) perpendicular. As usual we obtain the potential for the part of B that arises from currents inside the Sun by fitting an expansion to the observed line-of-sight component of B at the photosphere. A second least-squares fit is introduced to obtain the part of B that arises from currents outside the source surface. Comparisons are made between this model and observed coronal and interplanetary structures. There is evidence that observation data underestimate the strength of photospheric polar magnetic fields.

Levine, R. H.↗