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DOE OSTI2023

TESS giants transiting giants V – two hot Jupiters orbiting red giant hosts

ABSTRACT In this work, we present the discovery and confirmation of two hot Jupiters orbiting red giant stars, TOI-4377 b and TOI-4551 b, observed by Transiting Exoplanet Survey Satellite in the Southern ecliptic hemisphere and later followed-up with radial-velocity (RV) observations. For TOI-4377 b, we report a mass of $0.957^{+0.089}_{-0.087} \ M_\mathrm{J}$ and a inflated radius of 1.348 ± 0.081 RJ orbiting an evolved intermediate-mass star (1.36 M⊙ and 3.52 R⊙; TIC 394918211) on a period of of 4.378 d. For TOI-4551 b, we report a mass of 1.49 ± 0.13 MJ and a radius that is not obviously inflated of $1.058^{+0.110}_{-0.062} \ R_\mathrm{J}$, also orbiting an evolved intermediate-mass star (1.31 M⊙ and 3.55 R⊙; TIC 204650483) on a period of 9.956 d. We place both planets in context of known systems with hot Jupiters orbiting evolved hosts, and note that both planets follow the observed trend of the known stellar incident flux-planetary radius relation observed for these short-period giants. Additionally, we produce planetary interior models to estimate the heating efficiency with which stellar incident flux is deposited in the planet’s interior, estimating values of $1.91 \pm 0.48~{{\ \rm per\ cent}}$ and $2.19 \pm 0.45~{{\ \rm per\ cent}}$ for TOI-4377 b and TOI-4551 b, respectively. These values are in line with the known population of hot Jupiters, including hot Jupiters orbiting main-sequence hosts, which suggests that the radii of our planets have re-inflated in step with their parent star’s brightening as they evolved into the post-main sequence. Finally, we evaluate the potential to observe orbital decay in both systems.

Pereira, Filipe (ORCID:0000000221577146)↗

DOE OSTI2024

Tracing back the birth environments of Type Ia supernova progenitor stars: a pilot study based on 44 early-type host galaxies

The environmental dependence of Type Ia supernova (SN Ia) luminosities is well established, and efforts are being made to find its origin. Previous studies typically use the currently observed status of the host galaxy. However, given the delay time between the birth of the progenitor star and the SN Ia explosion, the currently observed status may differ from the birth environment of the SN Ia progenitor star. In this paper, employing the chemical evolution and accurately determined stellar population properties of 44 early-type host galaxies, we, for the first time, estimate the SN Ia progenitor star birth environment, specifically [Fe/H] Birth and [α/Fe] Birth . We show that [α/Fe] Birth has a $30.4^{\text{+10.6}}_{-10.1}{{\ \rm per\ cent}}$ wider range than the currently observed [α/Fe] Current , while the range of [Fe/H] Birth is not statistically different ($17.9^{\text{+26.0}}_{-27.1}{{\ \rm per\ cent}}$) to that of [Fe/H] Current . The birth and current environments of [Fe/H] and [α/Fe] are sampled from different populations (p-values of the Kolmogorov–Smirnov test <0.01). We find that light-curve fit parameters are insensitive to [Fe/H] Birth (<0.9σ for the non-zero slope), while a linear trend is observed with Hubble residuals (HRs) at the 2.4σ significance level. With [α/Fe] Birth , no linear trends (<1.1σ) are observed. Interestingly, we find that [α/Fe] Birth clearly splits the SN Ia sample into two groups: SN Ia exploded in [α/Fe] Birth -rich or [α/Fe ]Birth -poor environments. SNe Ia exploded in different [α/Fe] Birth groups have different weighted-means of light-curve shape parameters: 0.81 ± 0.33 (2.5σ). They are thought to be drawn from different populations (p-value = 0.01). Regarding SN Ia colour and HRs, there is no difference (<1.0σ) in the weighted-means and distribution (p-value > 0.27) of each [α/Fe] Birth group.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2025

Structural decomposition of merger-free galaxies hosting luminous AGNs

ABSTRACT Active galactic nucleus (AGN) growth in disc-dominated, merger-free galaxies is poorly understood, largely due to the difficulty in disentangling the AGN emission from that of the host galaxy. By carefully separating this emission, we examine the differences between AGNs in galaxies hosting a (possibly) merger-grown, classical bulge, and AGNs in secularly grown, truly bulgeless disc galaxies. We use galfit to obtain robust, accurate morphologies of 100 disc-dominated galaxies imaged with the Hubble Space Telescope. Adopting an inclusive definition of classical bulges, we detect a classical bulge component in $53.3 \pm 0.5$ per cent of the galaxies. These bulges were not visible in Sloan Digital Sky Survey photometry, however these galaxies are still unambiguously disc-dominated, with an average bulge-to-total luminosity ratio of $0.1 \pm 0.1$. We find some correlation between bulge mass and black hole mass for disc-dominated galaxies, though this correlation is significantly weaker in comparison to the relation for bulge-dominated or elliptical galaxies. Furthermore, a significant fraction ($\gtrsim 90$ per cent) of our black holes are overly massive when compared to the relationship for elliptical galaxies. We find a weak correlation between total stellar mass and black hole mass for the disc-dominated galaxies, hinting that the stochasticity of black hole–galaxy co-evolution may be higher in disc-dominated than bulge-dominated systems.

Fahey, Matthew J.↗

DOE OSTI2021

Autocrine and paracrine interferon signalling as ‘ring vaccination’ and ‘contact tracing’ strategies to suppress virus infection in a host

The innate immune response, particularly the interferon response, represents a first line of defence against viral infections. The interferon molecules produced from infected cells act through autocrine and paracrine signalling to turn host cells into an antiviral state. Although the molecular mechanisms of IFN signalling have been well characterized, how the interferon response collectively contribute to the regulation of host cells to stop or suppress viral infection during early infection remain unclear. Here, we use mathematical models to delineate the roles of the autocrine and the paracrine signalling, and show that their impacts on viral spread are dependent on how infection proceeds. In particular, we found that when infection is well-mixed, the paracrine signalling is not as effective; by contrast, when infection spreads in a spatial manner, a likely scenario during initial infection in tissue, the paracrine signalling can impede the spread of infection by decreasing the number of susceptible cells close to the site of infection. Furthermore, we argue that the interferon response can be seen as a parallel to population-level epidemic prevention strategies such as ‘contact tracing’ or ‘ring vaccination’. Thus, our results here may have implications for the outbreak control at the population scale more broadly.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2022

Rare-earth monopnictides: Family of antiferromagnets hosting magnetic Fermi arcs

We report since the discovery of topological insulators a great deal of research effort has been devoted to magnetic topological materials, in which nontrivial spin properties can be controlled by magnetic fields, culminating in a wealth of fundamental phenomena and possible applications. The main focus was on ferromagnetic materials that can host Weyl fermions and therefore spin-textured Fermi arcs. The recent discovery of Fermi arcs and new magnetic band splitting in the antiferromagnet (AFM) NdBi has opened up new avenues for exploration. Here we show that these uncharted effects are not restricted to this specific compound, but also emerge in CeBi and NdSb when they undergo paramagnetic to AFM transition. Our data show that the Fermi arcs in NdSb have twofold symmetry, leading to strong anisotropy that may enhance effects of spin textures on transport properties. Our findings thus demonstrate that the RBi and RSb series are materials that host magnetic Fermi arcs and may be a potential platform for modern spintronics.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

DOE OSTI2024

Fast Iterative Multi-site Hosting Capacity Analysis for Distribution Systems With Search Space Pruning

Interconnection studies for distributed energy resources (DERs) is a time-intensive process, primarily due to the necessity of solving large number of power flow scenarios. Hosting capacity analysis (HCA) is a time-consuming aspect of interconnection studies that is divided into single-site HCA (SHCA) and multi-site HCA (MHCA). From a computational and understandable standpoint, the industry seeks iteration-based solutions for SHCA, although it doesn't maximize the total DER hosting capacity (DERHC) of the grid, as MHCA does. While non-iterative solutions are available for MHCA, they involve a trade-off between the modeling accuracy of the distribution system, solution quality, and ease of understanding. In this work, we present a fast iterative solution for MHCA, reducing computational complexity by eliminating the need to solve power flows for a large amount of search space, thus making iterative solutions feasible. This iterative approach guarantees both a global optimal solution with sufficient time and a fast, close-to-optimal solution through efficient search space pruning. It also easily integrates with existing utility HCA tools. The results are demonstrated on select locations in the IEEE-123 bus system for community-scale interconnection studies. We highlight the benefits of skipping the need to solve millions of power flows, all while maximizing the grid's total DERHC.

Guddanti, Kishan Prudhvi↗

DOE OSTI2025

Dynamic Charging Rendezvous and Motion Planning for a Multi-AGV Team Including a Mobile Charging Host

Teams of automated battery-powered electric vehicles have the potential to execute complex mission tasks in off-road environments for agriculture, military, and other applications. Limited onboard energy reserves hinder their adoption in large-scale resource-constrained environments, where recharging is a necessity. It may be infeasible to install a network of static charging stations in off-road environments. For this reason, dedicated mobile host vehicles with charging capabilities are proposed as a means to increase range and capabilities of the multivehicle team. Here, in this study, we consider an ad hoc planning framework, where results from a high-confidence trajectory planner are leveraged to plan charging rendezvous between a host and other worker vehicles in a receding horizon fashion to provide high confidence that energy reserves will not be prematurely exhausted. The core problem is posed so as to minimize the impact of recharging on the mission in terms of task delays, overall energy utilization, and costs of fast charging. Through extensive Monte Carlo simulations of an off-road mission, we show a decrease in task delays without substantial increases in energy needs by updating the charging rendezvous plan during the mission. However, if updates are made too often, model mismatch may cause unnecessary cycling and mission failure.

Energy constraints↗

DOE OSTI2020

Serendipita bescii promotes winter wheat growth and modulates the host root transcriptome under phosphorus and nitrogen starvation

Summary Serendipita vermifera ssp. bescii , hereafter referred to as S. bescii , is a root‐associated fungus that promotes plant growth in both its native switchgrass host and a variety of monocots and dicots. Winter wheat ( Triticum aestivum L.), a dual‐purpose crop, used for both forage and grain production, significantly contributes to the agricultural economies of the Southern Great Plains, USA. In this study, we investigated the influence of S. bescii on growth and transcriptome regulation of nitrogen (N) and phosphorus (P) metabolism in winter wheat. Serendipita bescii significantly improved lateral root growth and forage biomass under a limited N or P regime. Further, S. bescii activated sets of host genes regulating N and P starvation responses. These genes include, root‐specific auxin transport, strigolactone and gibberellin biosynthesis, degradation of phospholipids and biosynthesis of glycerolipid, downregulation of ammonium transport and nitrate assimilation, restriction of protein degradation by autophagy and subsequent N remobilization. All these genes are hypothesized to regulate acquisition, assimilation and remobilization of N and P. Based on transcriptional level gene regulation and physiological responses to N or P limitation, we suggest S. bescii plays a critical role in modulating stress imposed by limitation of these two critical nutrients in winter wheat.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2025

Seasonal Host Shifts for Legionella Within an Industrial Water‐Cooling System

Legionella is a genus of environmental bacteria containing pathogenic species such as Legionella pneumophila that are responsible for Legionnaires' disease, a potentially fatal respiratory infection. Disease aetiology can involve Legionella replication intracellularly within protists and this study aimed to characterise the Legionella -protist relationship to develop novel outbreak prevention targets. Water and sediment samples were collected from a water-cooling tower in South Carolina over a 6-month period. Concomitantly, multiple environmental parameters were recorded. Bacterial and eukaryotic communities were characterised using 16S rRNA gene V4 region and a 252 bp fragment of 18S rRNA gene, respectively. Co-occurrence network analyses were performed to elucidate Legionella -protist correlations through time. We found that Legionella correlated with different protists as the seasons progressed. Acanthamoeba correlated with Legionella in early spring followed by Vannella and Korotnevella in late spring and early summer, and were joined by Echinamoeba in mid-summer. Vannella and Acanthamoeba are known potential hosts for Legionella , while Korotnevella is a potential undocumented host. Of the environmental parameters, temperature showed strong correlation with protists genera, suggesting that Legionella abundance was driven by temperature-dependent protist availability. Our results highlight ecological shifts that are associated with elevated Legionella levels, which offers potential targets to help predict and prevent disease outbreaks.

microbial communities↗

DOE OSTI2021

A viral RNA hijacks host machinery using dynamic conformational changes of a tRNA-like structure

Viruses require multifunctional structured RNAs to hijack their host’s biochemistry, but their mechanisms can be obscured by the difficulty of solving conformationally dynamic RNA structures. Using cryo–electron microscopy (cryo-EM), we visualized the structure of the mysterious viral transfer RNA (tRNA)–like structure (TLS) from the brome mosaic virus, which affects replication, translation, and genome encapsidation. Structures in isolation and those bound to tyrosyl-tRNA synthetase (TyrRS) show that this ~55-kilodalton purported tRNA mimic undergoes large conformational rearrangements to bind TyrRS in a form that differs substantially from that of tRNA. Our study reveals how viral RNAs can use a combination of static and dynamic RNA structures to bind host machinery through highly noncanonical interactions, and we highlight the utility of cryo-EM for visualizing small, conformationally dynamic structured RNAs.

Science & Technology - Other Topics↗

DOE OSTI2023

Horizontal Gene Transfer and CRISPR Targeting Drive Phage-Bacterial Host Interactions and Coevolution in “Pink Berry” Marine Microbial Aggregates

Phages, which are viruses that infect bacteria, are important components of all microbial systems, in which they drive the turnover of organic matter by lysing host cells, facilitate horizontal gene transfer (HGT), and coevolve with their bacterial hosts. Bacteria resist phage infection, which is often costly or lethal, through a diversity of mechanisms.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2025

CpoS-Inc interactions facilitate host cell modulation during Chlamydia trachomatis infection

ABSTRACT Chlamydia trachomatis ( C.t .), the leading bacterial cause of sexually transmitted infections, replicates within a unique intracellular compartment called the inclusion, which is modified by secreted proteins known as inclusion membrane (Inc) proteins. Here, we further characterize CpoS, an Inc protein previously shown to be critical for bacterial replication and inclusion development. We demonstrate that CpoS directly binds multiple coiled-coil region-containing Incs and engages Rab GTPases at a separate site. Notably, CpoS-InaC interactions facilitate the recruitment of select Arf GTPases to the inclusion membrane, while Rab recruitment occurs independently of these interactions. Biochemical and biophysical analyses revealed that Incs self-oligomerize to form higher-ordered structures, with CpoS adopting a tetrameric conformation resembling that of eukaryotic SNARE proteins. We propose that these assemblies serve as scaffolds to orchestrate vesicle docking, tethering, and fusion. Our findings highlight the intricate interplay between bacterial and host factors, revealing how C.t . leverages both Inc-Inc interactions and host protein engagement to manipulate vesicular trafficking and sustain infection.

Tijerina, Xavier [Department of Microbiology and I↗

DOE OSTI2020

Microbiomes Reduce Their Host’s Sensitivity to Interspecific Interactions

Description of the Earth’s microbiota has recently undergone a phenomenal expansion that has challenged basic assumptions in many areas of biology, including hominid evolution, human gastrointestinal and neurodevelopmental disorders, and plant adaptation to climate change. By using the classic model system of freshwater phytoplankton that has been drawn upon for numerous foundational theories in ecology, we show that microbiomes, by facilitating their host population, can also influence between-species interactions among their eukaryotic hosts. Between-species interactions, including competition for resources, has been a central tenet in the field of ecology because of its implications for the diversity and composition of communities and how this in turn shapes ecosystem functioning.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Grid Modeling and Hosting Capacity Analysis

An interface with the OpenDSS distribution grid simulator, facilitating users in calibrating and validating models. Additionally, three distinct tools have been developed: PV Hosting Capacity: This tool allows users to determine the additional amount of photovoltaic (PV) generation that can be integrated into the system without breaching operational constraints. EV Hosting Capacity: This tool focuses on identifying the capacity for incorporating extra electric vehicle (EV) load into the system without surpassing operational limitations. Project Impact Analysis Tool: This tool is designed to assess and report all potential grid violations associated with a specific project, providing valuable insights into its impact on the distribution grid.

Poudel, Shiva↗

DOE OSTI2025

Mechanistic within-host mathematical model of inhalational anthrax

We present a mathematical model of the dynamics of Bacillus anthracis bacteria within the lymph nodes and blood of a host, following inhalation of an initial dose of spores. We also incorporate the dynamics of protective antigen, which is the binding component of the anthrax toxin produced by the bacteria. The model offers a mechanistic description of the early infection dynamics of inhalational anthrax, while its stochastic nature allows us to study the probabilities of different outcomes (for example, how likely it is that the infection will be cleared for a given inhaled dose of spores) in order to explain dose-response data for inhalational anthrax. The model is calibrated via a Bayesian approach, using in vivo data from New Zealand white rabbit and guinea pig infection studies, enabling within-host parameters to be estimated. We also leverage incubation-period data from the Sverdlovsk 1979 anthrax outbreak to show that the model can accurately describe human time-to-symptoms data under reasonable parameter regimes. Finally, we derive a simple approximate formula for the probability of symptom onset before time t, assuming that the number of inhaled spores has a Poisson distribution.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2022

DISTRIBUTION OF ION-EXCHANGEABLE RARE EARTH ELEMENTS AND CRITICAL MINERALS IN COAL-HOSTED CLAYS OF THE POWDER RIVER BASIN, WY

Increasing demand for a more robust domestic supply of rare earth elements (REE) and critical minerals (CM) has led to significant investigation into unconventional sources. Coal and coal byproducts from the Powder River Basin (PRB) of Wyoming are potential sources of REE but lack complete characterization of mineral hosts including ion-adsorption clays (IACs). IACs, which provide a substantial portion of the global REE supply, form when hydrated REE complexes are physiosorbed to negatively charged sites on clay surfaces. Typical IAC minerals include kaolinite, illite, and smectite. REE complexes are easily leached from IACs via ion exchange, making them economically attractive. However, research regarding the partitioning behaviors of strategic metals into PRB coal-hosted clays is limited. This project aims to quantify the modes of occurrence and distribution of REE and CM in clay minerals derived from PRB coals. Strategic metals investigated in this project have historic production or promising deposits within the PRB and/or high anticipated supply risk, and include: REE (lanthanides and Y), V, Ti, platinum group elements (PGE; Pt, Pd, Rh, Ru, Ir, Os), Al, Co, Ga, Zr, and W. Semi-quantitative compositional data from portable x-ray fluorescence spectroscopy (pXRF) on coal core from the PRB is consistent with the known correlation between REE and Al content, suggesting increased REE abundance will be found in clay-rich units. pXRF data also identifies elevated V, Ti, Co, and Zr correlated with Al. Preliminary x-ray diffraction (XRD) data indicates kaolinite, illite, and dickite are abundant minerals in overburden and clay-rich partings. Quantitative analysis via inductively coupled plasma mass spectrometry (ICP-MS) provides insights into REE and CM fractionation in coals as we compare trace metal occurrence to variations in mineralogy. Additionally, we apply scanning electron microscopy (SEM) and energy dispersive x-ray spectroscopy (EDS) data to correlate clay size and morphology to trace metal occurrence. Our findings supplement a broader effort to couple REE and CM extraction with existing domestic coal production and contribute to the fundamental understanding of adsorption processes that occur in low-temperature basin environments.

Stuart, Sophia↗

DOE OSTI2023

Summary of Vendor Irradiation Capsule Workshop Hosted at Oak Ridge National Laboratory, October 3-4, 2022

The Department of Energy office of Nuclear Energy, Advanced Reactor Technology office tasked Idaho National Laboratory (INL), and Oak Ridge National Laboratory (ORNL) with hosting a set of two workshops. The primary purpose of these workshops was to convince the commercial high temperature reactor community, specifically the graphite and composite experts, to collaborate with the building and operation of a graphite/ceramic composite irradiation capsule(s). The workshops were designed to first instruct the attendees on the technical and scheduling challenges in conducting such an experiment by providing information on different technical areas in scheduling, designing, building, operating, and disassembling such irradiation capsules. A secondary purpose was to determine the individual irradiation requirements (including the desired irradiated material properties) to understand what the remaining technical needs for gas-cooled and salt-cooled advanced nuclear reactors. The first workshop was held at ORNL October 3-4, 2022. This report summarizes the discussions held during this workshop. The second workshop was hosted at INL April 4-6, 2023 and will have a separate summary report.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

DOE OSTI2020

Multi-omics Characterization of the Host Response to COVID-19

This project is a multi-disciplinary collaboration between investigators at PNNL with expertise in mass spectrometry (MS)-based omics technology development, omics measurement methods development and application, statistics, machine learning and integration of disparate datasets for a systems-level understanding, and expertise in pathogenic coronaviruses, and investigators at the University of Wisconsin-Madison (UW-Madison) with expertise in pathogenic respiratory viruses (e.g. influenza). The goal of this project is to obtain a comprehensive picture of the human host factors critical for the outcome of SARS-CoV-2 infection. We will generate broad untargeted multi-omics profiles using both state-of-the-art and novel instrumentation and approaches to enable the identification of the molecular mechanisms and host response pathways that impact human COVID-19 outcomes. We anticipate these results will lead to the generation of biomarker panels that are predictive of disease outcomes and mechanistic hypotheses that can be further interrogated in future studies and will provide the basis for vaccine or therapeutic development. To do so, we are obtaining and analyzing blood samples from COVID-19 patients with a range of disease outcomes that were treated at the Center Hospital of the National Center for Global Health and Medicine in Tokyo, Japan and other collaborating hospitals in our network. Specifically, this project will fund proteomics and metabolomics analyses of clinical COVID samples, machine learning-based integration of the data, and pathway-based interpretation of the data. This project was funded in June 2020. In the time span of June to September 2020, the project team developed an analytically and statistically robust analysis plan and made various preparations to facilitate sample receipt from our UW-Madison collaborators. This included blocking and randomization of sample prep orders, ordering of reagents and reference materials, and shipping of materials needed for preparation of the samples under BSL3 conditions to our collaborators at UW-Madison. As of FY21, this project has been picked up via a sponsor, the Naval Medical Research Center, which will cover the remainder of the proposed scope of work.

60 APPLIED LIFE SCIENCES↗