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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 289 records · Page 16

Imaging Systems Provide Maps for U.S. Soldiers

Spanning nearly four decades, the remarkable Landsat program has continuously provided data about the Earth s surface, including detailed maps of vegetation, land use, forest extent and health, surface water, population distribution, as well as how these features have changed over time. Managed by NASA and the U.S. Geological Survey, Landsat s series of satellites obtain data through passive remote sensing, or the use of sensors to read the energy reflected or emitted from the Earth s surface. After the data from the sensors is processed and analyzed, it can be applied to create information-rich images of the planet. While the Landsat program has launched seven satellites since 1972, only Landsat 5 and 7 are currently operating. The next spacecraft in line to ensure continuity of data for years to come is the Landsat Data Continuity Mission (LDCM). Planned for launch in 2012, LDCM will take measurements of the Earth in visible, nearinfrared, shortwave infrared, and thermal infrared bands. In addition to widespread use for land use planning and monitoring on local to regional scales, support for disaster response and evaluations, as well as water use monitoring, LDCM measurements will directly serve NASA s research in the areas of climate, the carbon cycle, ecosystems, the water cycle, biogeochemistry, and Earth s surface and interior.

Source record↗

Origin of reduced efficiency in GaN-based micro-LEDs studied by scanning near-field optical microscopy

The quantum efficiency of micro-light emitting diodes (micro-LEDs) is lower than that of large area LEDs. This efficiency reduction is typically attributed to the nonradiative Shockley–Read–Hall recombination at the surface defects and current leakage through the sidewall region without a clear distinction between these effects. In this work, we attempt to find out which of these phenomena is most critical for the reduced efficiency of micro-LEDs. This has been done by mapping electroluminescence (EL) and photoluminescence (PL) and measuring PL dynamics in blue GaN micro-LEDs fabricated by dry etching. It has been found that in the as-etched device, the EL intensity is much lower than in devices with KOH etching and atomic layer deposition of SiO 2 . This effect is especially pronounced close to the sidewalls. On the other hand, PL decay times are similar in as-etched and passivated devices, both in their center and at the sidewalls. This allows concluding that the main mechanism of the reduced efficiency of micro-LEDs fabricated by dry etching is the current leakage in the sidewall region and not the nonradiative recombination. The KOH etching has been found to be the most efficient means to eliminate the current leakage.

36 MATERIALS SCIENCE↗

SU-F-J-196: A Prototype System for Portal Imaging for Intensity Modulated Neutron Therapy

Purpose: Fast neutron therapy is offered at the University of Washington Medical Center for treatment of selected cancers. The hardware and control systems of the UW Clinical Neutron Therapy System are undergoing upgrades to enable delivery of IMNT. To clinically implement IMNT, dose verification tools need to be developed. We propose a portal imaging system that relies on the creation of positron emitting isotopes ({sup 11}C and {sup 15}O) through (n, 2n) reactions with a PMMA plate placed below the patient. After field delivery, the plate is retrieved from the vault and imaged using a reader that detects the annihilation photons. The pattern of activity produced in the plate provides information to reconstruct the neutron fluence map that can be compared to fluence maps from Monte Carlo (MCNP) simulations to verify treatment delivery. We have previously performed Monte Carlo simulations of the portal imaging system (GATE simulations) and the beam line (MCNP simulations). In this work, initial measurements using a prototype system are presented. Methods: Custom electronics were developed for BGO detectors read out with photomultiplier tubes (previous generation PET detectors from a CTI ECAT 953 scanner). Two detectors were placed in coincidence, with a detector separation of 2 cm. Custom software was developed to create the crystal look up tables and perform a limited angle planar reconstruction with a stochastic normalization. To test the initial capabilities of the system, PMMA squares were irradiated with neutrons at a depth of 1.5 cm and read out using the prototype system. Doses ranging from 10–200 cGy were delivered. Results: Using the prototype system, dose differences in the therapeutic range could be determined. Conclusion: The prototype portal imaging system is capable of detecting neutron doses as low as 10–50 cGy and shows great promise as a patient QA tool for IMNT.

60 APPLIED LIFE SCIENCES↗

Image tools for UNIX

This talk features two simple and useful tools for digital image processing in the UNIX environment. They are xv and pbmplus. The xv image viewer which runs under the X window system reads images in a number of different file formats and writes them out in different formats. The view area supports a pop-up control panel. The 'algorithms' menu lets you blur an image. The xv control panel also activates the color editor which displays the image's color map (if one exists). The xv image viewer is available through the internet. The pbmplus package is a set of tools designed to perform image processing from within a UNIX shell. The acronym 'pbm' stands for portable bit map. Like xv, the pbm plus tool can convert images from and to many different file formats. The source code and manual pages for pbmplus are also available through the internet. This software is in the public domain.

Banks, David C.↗

In-Situ Gamma Radiation Mapping Device - 19353

The SRNL developed GrayQb{sup TM} is a passive, low cost gamma radiation mapping device which uses a tungsten pinhole and a phosphor storage plate (PSP) to generate images. Presently, the device requires retrieval to extract images off the PSP using an external scanner. In partnership with Los Alamos National Lab (LANL), SRNL has developed an in-situ GrayQb{sup TM} radiation mapping device eliminating the need to remove the radiation sensitive phosphor storage plate (PSP) from the device for scanning between exposures. By incorporating a customized version of the LANL patented MiniMax camera-based PSP reader system into the GrayQb{sup TM} housing, the exposed PSP can now be read in-situ and digitally transmitted to a remote computer for viewing. In-situ imaging is a valuable addition to GrayQb{sup TM} because of the reduced need of personnel interaction which mitigates risk as well as the option for multiple images being acquired during one deployment. Upgrades implemented which allow for in-situ imaging to be performed include using the tungsten pinhole, a PSP, red LEDs, a blue light filter, and a commercial off the shelf (COTS) color camera. The images are transmitted wirelessly to an external computer. This presentation will discuss the selection, characteristics, and testing of the camera-based PSP reading system, improved PSP materials, and the results/performance of the upgraded GrayQb{sup TM} device. Testing has been performed with simulated radiation exposures as well as A-241 and Cs-137 button sources. These upgrades and tests have been performed over a 12-month period and this presentation will be a summary and conclusion to this year long project. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

AbacusSummit Halo Light Cone Catalogs

This is a set of halo light cone catalogs from the AbacusSummit suite of cosmological N-body simulations (abacussummit.readthedocs.io/). They are a value-added data product provided by post-processing the simulation output. The main application of the halo light cone catalogs is the construction of realistic mock galaxy catalogues and weak lensing maps on the sky. The algorithm (described in Hadzhiyska et al. 2021) associates CompaSO halos from 29 redshift epochs spanning z = 0.1-2.5 with their particles at the time of light-cone crossing. It then records the halo and particle information into an easily accessible product, which can be read with the CompaSO reader. The 25 base resolution boxes at fiducial cosmology have a halo light cone catalog covering an octant of the sky to z approx 0.8 and about 2000 deg2 extending to z approx 2.4. The huge boxes provide light cone information of the full sky until z approx 2.18 and extend further towards the corners of the box (available until z = 2.25). Galaxy mock catalogs on the sky can be generated easily though the AbacusHOD script providing an extended HOD framework (see Yuan et al. 2021, for details), which has been modified to work with the halo light cone catalogs. The available tracers are luminous red galaxies (LRGs), emission-line galaxies (ELGs), and quasi-stellar objects (QSOs).

79 ASTRONOMY AND ASTROPHYSICS↗

Monitoring water quality from LANDSAT

Water quality monitoring possibilities from LANDSAT were demonstrated both for direct readings of reflectances from the water and indirect monitoring of changes in use of land surrounding Swift Creek Reservoir in a joint project with the Virginia State Water Control Board and NASA. Film products were shown to have insufficient resolution and all work was done by digitally processing computer compatible tapes. Land cover maps of the 18,000 hectare Swift Creek Reservoir watershed, prepared for two dates in 1974, are shown. A significant decrease in the pine cover was observed in a 740 hectare construction site within the watershed. A measure of the accuracy of classification was obtained by comparing the LANDSAT results with visual classification at five sites on a U-2 photograph. Such changes in land cover can alert personnel to watch for potential changes in water quality.

Barker, J. L.↗

An optimized ChIP-Seq framework for profiling histone modifications in Chromochloris zofingiensis

The eukaryotic green alga Chromochloris zofingiensis is a reference organism for studying carbon partitioning and a promising candidate for the production of biofuel precursors. Recent transcriptome profiling transformed our understanding of its biology and generally algal biology, but epigenetic regulation remains understudied and represents a fundamental gap in our understanding of algal gene expression. Chromatin immunoprecipitation followed by deep sequencing (ChIP-Seq) is a powerful tool for the discovery of such mechanisms, by identifying genome-wide histone modification patterns and transcription factor-binding sites alike. Here, we established a ChIP-Seq framework for Chr. zofingiensis yielding over 20 million high-quality reads per sample. The most critical steps in a ChIP experiment were optimized, including DNA shearing to obtain an average DNA fragment size of 250 bp and assessment of the recommended formaldehyde concentration for optimal DNA-protein cross-linking. We used this ChIP-Seq framework to generate a genome-wide map of the H3K4me3 distribution pattern and to integrate these data with matching RNA-Seq data. In line with observations from other organisms, H3K4me3 marks predominantly transcription start sites of genes. Our H3K4me3 ChIP-Seq data will pave the way for improved genome structural annotation in the emerging reference alga Chr. zofingiensis.

59 BASIC BIOLOGICAL SCIENCES↗

Custom Accessors: Enabling Scalable Data Ingestion, (Re-)Organization, and Analysis on Distributed Systems

The emerging class of high velocity and high volume data analytic workflows comprise interwoven data ingestion, organization, and processing stages, with ingestion and organization steps often contributing comparable or even higher computational costs than actual processing steps. Since complex workflows consist of a variety of phases that view and use data differently, being able to construct efficient, scalable, distributed data structures (arrays, vectors, sets, maps, and multi-maps) is essential and requires custom methods to extend and shrink containers, analyze and position data, and, maintain globallyconsistent meta-data. In this paper, we propose a novel datastructure access paradigm based on the concept of Accessors. At a high level, accessors are customizable callable objects that can modify the behavior of insert, read, update, and delete operations for distributed containers while preserving atomicity guarantees. Accessors provide a very clean and natural way to implement a variety of programming patterns, e.g., conditional insertion/deletion and cascading computations, which would be otherwise hard (or even impossible) to express in parallel and distributed settings without using locks. We demonstrate the practicality and usefulness of our approach with two representative use cases and study the performance of these applications on a distributed High-Performance Computing system. Our analysis highlights that our proposed abstraction allows for an effective overlapping and concurrent execution of different workflow steps (e.g., data ingestion and analysis), which in a conventional analytics pipeline would execute sequentially, contributing cumulatively to the overall latency.

Castellana, Vito G. [BATTELLE (PACIFIC NW LAB)] (O↗

Delineation of soil temperature regimes from HCMM data

Supplementary data including photographs as well as topographic, geologic, and soil maps were obtained and evaluated for ground truth purposes and control point selection. A study area (approximately 450 by 450 pixels) was subset from LANDSAT scene No. 2477-17142. Geometric corrections and scaling were performed. Initial enhancement techniques were initiated to aid control point selection and soils interpretation. The SUBSET program was modified to read HCMM tapes and HCMM data were reformated so that they are compatible with the ORSER system. Initial NMAP products of geometrically corrected and scaled raw data tapes (unregistered) of the study were produced.

Day, R. L.↗

Radiological Surveys of 1600 km of In-Use Roads in Ichinoseki City, Japan Following the Fukushima Dai-ichi Reactor Accident - 17467

In March 2011, the Japanese Fukushima Dai-ichi nuclear reactor was damaged by a 9.0 magnitude earth quake and subsequent 15-meter tsunami. As a result of the nuclear reactor accident, radioactive material from the nuclear reactor and fuel storage pool (primarily radioactive iodine and cesium) was released to the atmosphere and carried by the wind as a plume that spread radioactive contamination across roughly 13,000 square kilometers of the countryside. Amec Foster Wheeler's Radiological Services and Engineering Group mobilized a team of Engineers and Operators to Japan to implement a radiological survey (scan) of roads located in Ichinoseki City, Iwate Prefecture, north of Fukushima, using three of Amec Foster Wheeler's Orion ScanPlotSM advanced radiological scanning systems. The survey was performed in less than two months while the roads were kept open for public use, and was conducted with motorized scooters and battery-assisted bicycles. The survey was performed with operational support from Obayashi, Inc., a large Japanese construction company headquartered in Tokyo. Over a seven-week period, the ScanPlotSM systems covered approximately 1,600 kilometers of roads within Ichinoseki City and surrounding areas of Iwate Prefecture. ScanPlotSM systems recorded GPS locations and radiation dose rate levels from Cs-137 on the road's surface at one-second increments during the survey and displayed the dose rate reading in micro-Sieverts per hour (μSv/h) on the back of the bicycle or motor scooter in real-time on a results monitor so that members of the public would be able to see real-time data. Radiological survey data was provided to Obayashi daily for development of survey result maps for the city. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Development of Software to Model AXAF-I Image Quality

This report describes work conducted on Delivery Order 181 between October 1996 through June 1997. During this period software was written to: compute axial PSD's from RDOS AXAF-I mirror surface maps; plot axial surface errors and compute PSD's from HDOS "Big 8" axial scans; plot PSD's from FITS format PSD files; plot band-limited RMS vs axial and azimuthal position for multiple PSD files; combine and organize PSD's from multiple mirror surface measurements formatted as input to GRAZTRACE; modify GRAZTRACE to read FITS formatted PSD files; evaluate AXAF-I test results; improve and expand the capabilities of the GT x-ray mirror analysis package. During this period work began on a more user-friendly manual for the GT program, and improvements were made to the on-line help manual.

Geary, Joseph↗

Electron-ion coincidence measurements of molecular dynamics with intense X-ray pulses

Molecules can sequentially absorb multiple photons when irradiated by an intense X-ray pulse from a free-electron laser. If the time delay between two photoabsorption events can be determined, this enables pump-probe experiments with a single X-ray pulse, where the absorption of the first photon induces electronic and nuclear dynamics that are probed by the absorption of the second photon. Here we show a realization of such a single-pulse X-ray pump-probe scheme on N 2 molecules, using the X-ray induced dissociation process as an internal clock that is read out via coincident detection of photoelectrons and fragment ions. By coincidence analysis of the kinetic energies of the ionic fragments and photoelectrons, the transition from a bound molecular dication to two isolated atomic ions is observed through the energy shift of the inner-shell electrons. Via ab-initio simulations, we are able to map characteristic features in the kinetic energy release and photoelectron spectrum to specific delay times between photoabsorptions. In contrast to previous studies where nuclear motions were typically revealed by measuring ion kinetics, our work shows that inner-shell photoelectron energies can also be sensitive probes of nuclear dynamics, which adds one more dimension to the study of light-matter interactions with X-ray pulses.

74 ATOMIC AND MOLECULAR PHYSICS↗

Solving the 2D SUSY Gross-Neveu-Yukawa model with conformal truncation

We use Lightcone Conformal Truncation to analyze the RG flow of the two-dimensional supersymmetric Gross-Neveu-Yukawa theory, i.e. the theory of a real scalar superfield with a $\mathbb{Z}$ 2 -symmetric cubic superpotential, aka the 2d Wess-Zumino model. The theory depends on a single dimensionless coupling $\overline{g}$, and is expected to have a critical point at a tuned value ${\overline{g}}_{\ast }$ where it flows in the IR to the Tricritical Ising Model (TIM); the theory spontaneously breaks the $\mathbb{Z}$ 2 symmetry on one side of this phase transition, and breaks SUSY on the other side. We calculate the spectrum of energies as a function of $\overline{g}$ and see the gap close as the critical point is approached, and numerically read off the critical exponent ν in TIM. Beyond the critical point, the gap remains nearly zero, in agreement with the expectation of a massless Goldstino. We also study spectral functions of local operators on both sides of the phase transition and compare to analytic predictions where possible. In particular, we use the Zamolodchikov C -function to map the entire phase diagram of the theory. Crucial to this analysis is the fact that our truncation is able to preserve supersymmetry sufficiently to avoid any additional fine tuning.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

SNP Discovery with EST and NextGen Sequencing in Switchgrass ( Panicum virgatum L. )

Although yield trials for switchgrass (Panicum virgatum L.), a potentially high value biofuel feedstock crop, are currently underway throughout North America, the genetic tools for crop improvement in this species are still in the early stages of development. Identification of high-density molecular markers, such as single nucleotide polymorphisms (SNPs), that are amenable to high-throughput genotyping approaches, is the first step in a quantitative genetics study of this model biofuel crop species. We generated and sequenced expressed sequence tag (EST) libraries from thirteen diverse switchgrass cultivars representing both upland and lowland ecotypes, as well as tetraploid and octoploid genomes. We followed this with reduced genomic library preparation and massively parallel sequencing of the same samples using the Illumina Genome Analyzer technology platform. EST libraries were used to generate unigene clusters and establish a gene-space reference sequence, thus providing a framework for assembly of the short sequence reads. SNPs were identified utilizing these scaffolds. We used a custom software program for alignment and SNP detection and identified over 149,000 SNPs across the 13 short-read sequencing libraries (SRSLs). Approximately 25,000 additional SNPs were identified from the entire EST collection available for the species. This sequencing effort generated data that are suitable for marker development and for estimation of population genetic parameters, such as nucleotide diversity and linkage disequilibrium. Based on these data, we assessed the feasibility of genome wide association mapping and genomic selection applications in switchgrass. Overall, the SNP markers discovered in this study will help facilitate quantitative genetics experiments and greatly enhance breeding efforts that target improvement of key biofuel traits and development of new switchgrass cultivars.

09 BIOMASS FUELS↗

Centroid tracking with area array detectors

A computer program (ALGEVAL) has been developed to simulate the position estimating behavior of a centroid estimator algorithm using data typical of optical point spread function data recorded by an area array detector. Typical results are shown of varying detector properties and optical point spread function types. The detector parameters currently available for study include read noise mean value, dark current mean value and spatial variation, charge transfer efficiency and point spread function location, saturation level, signal level and pixel size. The program is capable of calculating any order centroid using an array size from 2 x 2 to 15 x 15 pixels. The output of the program is either a performance map, histogram data or tabluar data. A number of further developments are recommended.

Glavich, T. A.↗

The Release 6 reference sequence of the Drosophila melanogaster genome

Drosophila melanogaster plays an important role in molecular, genetic, and genomic studies of heredity, development, metabolism, behavior, and human disease. The initial reference genome sequence reported more than a decade ago had a profound impact on progress in Drosophila research, and improving the accuracy and completeness of this sequence continues to be important to further progress. We previously described improvement of the 117-Mb sequence in the euchromatic portion of the genome and 21 Mb in the heterochromatic portion, using a whole-genome shotgun assembly, BAC physical mapping, and clone-based finishing. Here, we report an improved reference sequence of the single-copy and middle-repetitive regions of the genome, produced using cytogenetic mapping to mitotic and polytene chromosomes, clone-based finishing and BAC fingerprint verification, ordering of scaffolds by alignment to cDNA sequences, incorporation of other map and sequence data, and validation by whole-genome optical restriction mapping. These data substantially improve the accuracy and completeness of the reference sequence and the order and orientation of sequence scaffolds into chromosome arm assemblies. Representation of the Y chromosome and other heterochromatic regions is particularly improved. The new 143.9-Mb reference sequence, designated Release 6, effectively exhausts clone-based technologies for mapping and sequencing. Highly repeat-rich regions, including large satellite blocks and functional elements such as the ribosomal RNA genes and the centromeres, are largely inaccessible to current sequencing and assembly methods and remain poorly represented. In conclusion, further significant improvements will require sequencing technologies that do not depend on molecular cloning and that produce very long reads.

59 BASIC BIOLOGICAL SCIENCES↗

The Design and Integrated Performance of SPT-3G

Abstract SPT-3G is the third survey receiver operating on the South Pole Telescope dedicated to high-resolution observations of the cosmic microwave background (CMB). Sensitive measurements of the temperature and polarization anisotropies of the CMB provide a powerful data set for constraining cosmology. Additionally, CMB surveys with arcminute-scale resolution are capable of detecting galaxy clusters, millimeter-wave bright galaxies, and a variety of transient phenomena. The SPT-3G instrument provides a significant improvement in mapping speed over its predecessors, SPT-SZ and SPTpol. The broadband optics design of the instrument achieves a 430 mm diameter image plane across observing bands of 95, 150, and 220 GHz, with 1.2′ FWHM beam response at 150 GHz. In the receiver, this image plane is populated with 2690 dual-polarization, trichroic pixels (∼16,000 detectors) read out using a 68× digital frequency-domain multiplexing readout system. In 2018, SPT-3G began a multiyear survey of 1500 deg 2 of the southern sky. We summarize the unique optical, cryogenic, detector, and readout technologies employed in SPT-3G, and we report on the integrated performance of the instrument.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗