Search NASA⌕ Search

SEARCH · Search NASA

Results for “sequence determinants”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 289 records · Page 16

A theoretical and observational study of the Red Giant Branch phase transition in Magellanic Cloud clusters - A progress report

Preliminary results are reported for an investigation comparing theoretical models of the sudden appearance of an extended RGB (and its effects on the spectral energy distributions of stellar populations) with data from ESO CCD observations of clusters in the LMC and SMC. Isochrones for the entire RGB are being constructed on the basis of 100 new evolutionary sequences (calculated using the evolution code of Sweigart and Gross, 1976 and 1978) to permit determination of synthetic colors and spectral energy distributions. The observations so far indicate a main sequence about 0.1 mag redder than that predicted by the present models or by the isochrones of VandenBerg and Bell (1985), and fail to show a B-V color difference at the RGB phase transition.

Buonanno, R.↗

Vacuum ultraviolet radiation and thermal cycling effects on atomic oxygen protective photovoltaic array blanket materials

The importance of synergistic environmental exposure is demonstrated through the evaluation of DuPont 93-1 in simulated LEO environment. Changes in optical properties, surface condition, and mass loss data are described. The qualitative results indicate the necessity for exposure of materials to a series of simulated LEO environments in order to properly determine synergistic effects and demonstrate the overall LEO durability of candidate materials. It is shown that synergistic effects may occur with vacuum thermal cycling combined with VUV radiation followed by atomic oxygen exposure. Testing the durability of candidate solar array blanket materials in a test sequence with necessary synergistic effects makes it possible to determine the appropriate material for providing structural support and maintaining the proper operating temperature for solar cells in the SSF Photovaltaic Power System.

Brady, J.↗

Leveraging Existing Mission Tools in a Re-Usable, Component-Based Software Environment

Emerging methods in component-based software development offer significant advantages but may seem incompatible with existing mission operations applications. In this paper we relate our positive experiences integrating existing mission applications into component-based tools we are delivering to three missions. In most operations environments, a number of software applications have been integrated together to form the mission operations software. In contrast, with component-based software development chunks of related functionality and data structures, referred to as components, can be individually delivered, integrated and re-used. With the advent of powerful tools for managing component-based development, complex software systems can potentially see significant benefits in ease of integration, testability and reusability from these techniques. These benefits motivate us to ask how component-based development techniques can be relevant in a mission operations environment, where there is significant investment in software tools that are not component-based and may not be written in languages for which component-based tools even exist. Trusted and complex software tools for sequencing, validation, navigation, and other vital functions cannot simply be re-written or abandoned in order to gain the advantages offered by emerging component-based software techniques. Thus some middle ground must be found. We have faced exactly this issue, and have found several solutions. Ensemble is an open platform for development, integration, and deployment of mission operations software that we are developing. Ensemble itself is an extension of an open source, component-based software development platform called Eclipse. Due to the advantages of component-based development, we have been able to vary rapidly develop mission operations tools for three surface missions by mixing and matching from a common set of mission operation components. We have also had to determine how to integrate existing mission applications for sequence development, sequence validation, and high level activity planning, and other functions into a component-based environment. For each of these, we used a somewhat different technique based upon the structure and usage of the existing application.

Greene, Kevin↗

An in silico assessment of gene function and organization of the phenylpropanoid pathway metabolic networks in Arabidopsis thaliana and limitations thereof

The Arabidopsis genome sequencing in 2000 gave to science the first blueprint of a vascular plant. Its successful completion also prompted the US National Science Foundation to launch the Arabidopsis 2010 initiative, the goal of which is to identify the function of each gene by 2010. In this study, an exhaustive analysis of The Institute for Genomic Research (TIGR) and The Arabidopsis Information Resource (TAIR) databases, together with all currently compiled EST sequence data, was carried out in order to determine to what extent the various metabolic networks from phenylalanine ammonia lyase (PAL) to the monolignols were organized and/or could be predicted. In these databases, there are some 65 genes which have been annotated as encoding putative enzymatic steps in monolignol biosynthesis, although many of them have only very low homology to monolignol pathway genes of known function in other plant systems. Our detailed analysis revealed that presently only 13 genes (two PALs, a cinnamate-4-hydroxylase, a p-coumarate-3-hydroxylase, a ferulate-5-hydroxylase, three 4-coumarate-CoA ligases, a cinnamic acid O-methyl transferase, two cinnamoyl-CoA reductases) and two cinnamyl alcohol dehydrogenases can be classified as having a bona fide (definitive) function; the remaining 52 genes currently have undetermined physiological roles. The EST database entries for this particular set of genes also provided little new insight into how the monolignol pathway was organized in the different tissues and organs, this being perhaps a consequence of both limitations in how tissue samples were collected and in the incomplete nature of the EST collections. This analysis thus underscores the fact that even with genomic sequencing, presumed to provide the entire suite of putative genes in the monolignol-forming pathway, a very large effort needs to be conducted to establish actual catalytic roles (including enzyme versatility), as well as the physiological function(s) for each member of the (multi)gene families present and the metabolic networks that are operative. Additionally, one key to identifying physiological functions for many of these (and other) unknown genes, and their corresponding metabolic networks, awaits the development of technologies to comprehensively study molecular processes at the single cell level in particular tissues and organs, in order to establish the actual metabolic context.

NASA Program Fundamental Space Biology↗

Negatively supercoiled simian virus 40 DNA contains Z-DNA segments within transcriptional enhancer sequences

Three 8-base pair (bp) segments of alternating purine-pyrimidine from the simian virus 40 enhancer region form Z-DNA on negative supercoiling; minichromosome DNase I-hypersensitive sites determined by others bracket these three segments. A survey of transcriptional enhancer sequences reveals a pattern of potential Z-DNA-forming regions which occur in pairs 50-80 bp apart. This may influence local chromatin structure and may be related to transcriptional activation.

Nordheim, A.↗

Program RELATE

Computer program to compare sequences of amino acids in two proteins to determine regions of identical or related structure

AMINO ACID↗

The lithium-like 2s 2S-2p 2P transition in solar flares

Accurate wavelengths of the Fe XXIV lithium-like doublet at 192 and 255 A are derived from measurements made in a sample of four solar flares observed with a spectroheliograph aboard Skylab and selected to minimize systematic effects. The mean value of the Fe XXIV doublet interval is determined, and new members of the lithium isoelectronic sequence are identified, including Cr XXII, Mn XXIII, and Ni XXVI. Doublet splitting along the lithium sequence is analyzed in terms of the experimental screening factor, it is found that the doublet separations increase smoothly with charge number along the sequence, and the doublet interval in Ni XXVI is accurately extrapolated. The experimental screening factors are compared with the values predicted by Snyder's (1971) relativistic screening theory, and excellent agreement is found.

Widing, K. G.↗

Interplanetary approach optical navigation with applications

The use of optical data from onboard television cameras for the navigation of interplanetary spacecraft during the planet approach phase is investigated. Three optical data types were studied: the planet limb with auxiliary celestial references, the satellite-star, and the planet-star two-camera methods. Analysis and modelling issues related to the nature and information content of the optical methods were examined. Dynamic and measurement system modelling, data sequence design, measurement extraction, model estimation and orbit determination, as relating optical navigation, are discussed, and the various error sources were analyzed. The methodology developed was applied to the Mariner 9 and the Viking Mars missions. Navigation accuracies were evaluated at the control and knowledge points, with particular emphasis devoted to the combined use of radio and optical data. A parametric probability analysis technique was developed to evaluate navigation performance as a function of system reliabilities.

Jerath, N.↗

A parametric study of fracture toughness of fibrous composite materials

Impacts to fibrous composite laminates by objects with low velocities can break fibers giving crack-like damage. The damage may not extend completely through a thick laminate. The tension strength of these damage laminates is reduced much like that of cracked metals. The fracture toughness depends on fiber and matrix properties, fiber orientations, and stacking sequence. Accordingly, a parametric study was made to determine how fiber and matrix properties and fiber orientations affect fracture toughness and notch sensitivity. The values of fracture toughness were predicted from the elastic constants of the laminate and the failing strain of the fibers using a general fracture toughness parameter developed previously. For a variety of laminates, values of fracture toughness from tests of center-cracked specimens and values of residual strength from tests of thick laminates with surface cracks were compared to the predictions to give credibility to the study. In contrast to the usual behavior of metals, it is shown that both ultimate tensile strength and fracture toughness of composites can be increased without increasing notch sensitivity.

Poe, C. C., Jr.↗

Intermediate-age core helium burning stars and the distance to the Magellanic Clouds

The luminosities of the core helium burning stars in six Magellanic Cloud intermediate-age star clusters, whose ages have recently been determined from photometry reaching below the main-sequence turnoff, are compared with the predictions of a new grid of theoretical models. It is found that for the so-called 'short' distance moduli consistent results can be achieved with moderate amounts of mass loss from the main sequence to the core helium burning stage for the older clusters, and with rather more substantial mass loss for the younger objects. For the 'long' moduli, however, the results of the comparison give inconsistent results in that the required masses for the clump stars generally exceed the corresponding turnoff masses, in some cases by several tenths of a solar mass. The results support the adoption of smaller distances to these galaxies.

Seidel, E.↗

A parametric study of fracture toughness of fibrous composite materials

Impacts to fibrous composite laminates by objects with low velocities can break fibers giving crack-like damage. The damage may not extend completely through a thick laminate. The tension strength of these damage laminates is reduced much like that of cracked metals. The fracture toughness depends on fiber and matrix properties, fiber orientations, and stacking sequence. Accordingly, a parametric study was made to determine how fiber and matrix properties and fiber orientations affect fracture toughness and notch sensitivity. The values of fracture toughness were predicted from the elastic constants of the laminate and the failing strain of the fibers using a general fracture toughness parameter developed previously. For a variety of laminates, values of fracture toughness from tests of center-cracked specimens and values of residual strength from tests of thick laminates with surface cracks were compared to the predictions to give credibility to the study. In contrast to the usual behavior of metals, it is shown that both ultimate tensile strength and fracture toughness of composites can be increased without increasing notch sensitivity.

Poe, C. C., Jr.↗

Molecular outflows and mass loss in the pre-main-sequence stars

Molecular outflows are used here to probe mass loss in premain sequence (PMS) stars. Mass-loss rates are determined for 26 objects ranging in luminosity from four to about 100,000 solar, in mass from 0.5 to 30 solar, and in age from about 10,000 to about a million years. The derived mass-loss rates range from 9 x 10 to the -9th to 9 x 10 to the -4th solar mass/yr, with a typical value of 3 x 10 to the -7th solar mass/yr. PMS objects showing mass loss fall in a clearly demarcated region of the H-R diagram. The mass loss is proportional to bolometric luminosity to the 0.6 power and to stellar mass to the 1.8 power. The implications of these findings for the nature of the PMS mass-loss mechanism, for self-regulated low-mass star formation, and for planetary formation are discussed.

Levreault, Russell M.↗

C2 in Comet Halley - Evidence for its being third generation and resolution of the vibrational population discrepancy

Long-split spectrophotometric observations of Comet Halley on five nights at heliocentric distances of 0.90-2.21 AU are used to determine the surface brightness distribution of the coma in the strongest C2 Swan bands and the scattered light continuum. It is found that the C2 must be the product of the decay of two precursors. A clear-cut determination of the variation of the C2 band sequence flux ratios with heliocentric distance is obtained.

O'Dell, C. R.↗

Heavy ion beam-ionosphere interactions - Charging and neutralizing the payload

Three different electrical charging and neutralization processes were experienced during gun operation in the Argon Release Controlled Studies rocket flights, which carried ion generators to 400-500 km in the nighttime auroral ionosphere: DC charging of the vehicle, brief charging at gun turn-on, and extended oscillatory sequences. The present analysis of these phenomena has determined that, during oscillatory events, the entire environment of a payload could alternate between hot electron and cold electron configurations at rates which may have been in excess of 10 kHz.

Kaufmann, R. L.↗

Parallel algorithm for determining motion vectors in ice floe images by matching edge features

A parallel algorithm is described to determine motion vectors of ice floes using time sequences of images of the Arctic ocean obtained from the Synthetic Aperture Radar (SAR) instrument flown on-board the SEASAT spacecraft. Researchers describe a parallel algorithm which is implemented on the MPP for locating corresponding objects based on their translationally and rotationally invariant features. The algorithm first approximates the edges in the images by polygons or sets of connected straight-line segments. Each such edge structure is then reduced to a seed point. Associated with each seed point are the descriptions (lengths, orientations and sequence numbers) of the lines constituting the corresponding edge structure. A parallel matching algorithm is used to match packed arrays of such descriptions to identify corresponding seed points in the two images. The matching algorithm is designed such that fragmentation and merging of ice floes are taken into account by accepting partial matches. The technique has been demonstrated to work on synthetic test patterns and real image pairs from SEASAT in times ranging from .5 to 0.7 seconds for 128 x 128 images.

Manohar, M.↗

Material property measurements with post-processed thermal image data

Some of the applications to materials evaluation and property determination of thermographic NDE using digital postprocessing of sequences of thermograms are demonstrated. A generic description is given of the steps used in postprocessing for obtaining material property values.

Welch, Christopher S.↗

Spectral stratigraphy

A new approach to stratigraphic analysis is described which uses photogeologic and spectral interpretation of multispectral remote sensing data combined with topographic information to determine the attitude, thickness, and lithology of strata exposed at the surface. The new stratigraphic procedure is illustrated by examples in the literature. The published results demonstrate the potential of spectral stratigraphy for mapping strata, determining dip and strike, measuring and correlating stratigraphic sequences, defining lithofacies, mapping biofacies, and interpreting geological structures.

Lang, Harold R.↗

GENEX: A knowledge-based expert assistant for Genbank data analysis

We describe a knowledge-based expert assistant, GENEX (Gene Explorer), that simplifies some analysis of Genbank data. GENEX is written in CLIPS (C Language Integrated Production System), and expert system tool, developed at the NASA Johnson Space Center. The main purpose of the system is to look for gene start site annotations, unusual DNA sequence composition, and regulatory protein patterns. application where determinations are made via a decision tree.

Batra, Sajeev↗