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Modular Autonomous Experimentation for Biological Applications

The Modular Autonomous Research System (MARS) was created to address a key challenge in scientific discovery: experiments are often slow, require significant manual labor, and generate data that is not easily integrated across different tools. This limits how quickly scientists can explore new materials, processes, and chemical reactions. Our motivation was to design a system that makes research faster, more reliable, and adaptable by combining automation with artificial intelligence. By doing so, we aimed to reduce human error, accelerate discovery, and allow researchers to quickly test many possibilities that would otherwise take months or years. Our approach was to build a flexible platform that connects laboratory robots, measurement instruments, and a central data system, all guided by artificial intelligence. MARS integrates liquid handling robots, robotic arms, and plate readers with an intelligent decision-making system that chooses the most informative experiments to run next. This creates a closed loop where experiments are performed automatically, the data is analyzed in real time, and new conditions are immediately tested. Through this work, we demonstrated that MARS can carry out multiple experiments with little or no human intervention, adapt to different scientific problems, and handle uncertain or noisy measurements in a robust way. The results show that modular and intelligent automation can significantly accelerate the pace of discovery, providing a model for future self-driving laboratories. This approach addresses the growing scientific need for adaptable, data-driven research platforms that can keep up with the complexity and scale of modern science.

59 BASIC BIOLOGICAL SCIENCES↗

Optimization and Evaluation of Energy Savings for Connected and Autonomous Off-Road Vehicles

Off-road vehicles, such as wheel loaders, excavators, and harvesters, are extensively utilized across a wide range of industries, including construction, agriculture, and mining. These machines have become indispensable in supporting the day-to-day operational needs of a nation, playing a critical role in various sectors' infrastructure and productivity. However, despite their utility, off-road vehicles are significant consumers of fossil fuels, resulting in substantial emissions that contribute to environmental degradation. This highlights the pressing need for research and technological advancements aimed at improving their energy efficiency and reducing their carbon footprint. There are, however, two primary challenges that must be addressed to achieve these goals. First, off-road vehicles typically perform both driving and working tasks simultaneously, which introduces a high level of complexity into their overall dynamic systems. Analysis the interactions between these functions is challenging. Second, research into off-road vehicles is inherently interdisciplinary, demanding expertise across several domains such as fluid power systems, vehicle dynamics, control theory, optimization techniques, and real-world implementation. Recognizing these challenges, we proposed the project titled "Optimization and Evaluation of Energy Savings for Connected and Autonomous Off-Road Vehicles" as a comprehensive solution to enhance fuel efficiency while simultaneously improving productivity. This project specifically focuses on autonomous off-road vehicles, with particular attention to wheel loaders, and seeks to develop novel methods to optimize energy consumption without sacrificing operational performance. The project integrates real-time control algorithms, vehicle dynamics modeling, and co-optimization of powertrain system and vehicle system to achieve these goals. Our optimization strategy dynamically co-optimizes critical parameters at both the powertrain and vehicle levels, including vehicle speed, working tool movements, powertrain dynamics, and engine operations in real-time. To streamline this optimization process, we developed a vehicle model that captures the key dynamics while significantly enhancing computational efficiency. This allows the system to intelligently minimize fuel consumption, all while maintaining or even improving productivity through real-time calculations during various off-road operations. To validate the effectiveness of this energy optimization method, we introduced a state-of-the-art Hardware-in-the-Loop (HIL) testbed. This reconfigurable testbed seamlessly integrates the actual engine with virtual models of the wheel loader's subsystems, allowing for accurate emulation of real-world operational loads and environments. By simulating these conditions, the HIL testbed enables us to evaluate the wheel loader’s performance under diverse working scenarios, ensuring the developed solution is applicable in real-world operations. This testbed proved to be instrumental in validating the optimization algorithms and demonstrating the system's practical effectiveness. During the evaluation and testing phase, we employed the HIL testbed to rigorously assess the energy savings and productivity improvements generated by the optimized system. The results were highly encouraging, revealing that the automated wheel loader achieved over 30% fuel savings compared to traditional, human-operated cycles, with comparable or even enhanced levels of productivity. The insights gained from this HIL-based testing provided critical validation of our approach and highlighted the potential for deploying these optimized autonomous technologies in real-world off-road vehicles.

33 ADVANCED PROPULSION SYSTEMS↗

A Bayesian method for using simulator data to enhance human error probabilities assigned by existing HRA methods

In the past several years, several international organizations have begun to collect data on human performance in nuclear power plant simulators. The data collected provide a valuable opportunity to improve human reliability analysis (HRA), but these improvements will not be realized without implementation of Bayesian methods. Bayesian methods are widely used to incorporate sparse data into models in many parts of probabilistic risk assessment (PRA), but Bayesian methods have not been adopted by the HRA community. In this paper, we provide a Bayesian methodology to formally use simulator data to refine the human error probabilities (HEPs) assigned by existing HRA methods. We demonstrate the methodology with a case study, wherein we use simulator data from the Halden Reactor Project to update the probability assignments from the SPAR-H method. The case study demonstrates the ability to use performance data, even sparse data, to improve existing HRA methods. Furthermore, this paper also serves as a demonstration of the value of Bayesian methods to improve the technical basis of HRA.

99 GENERAL AND MISCELLANEOUS↗

Development of a Severe Accident Analysis Engine Using Approximate Reasoning

In hypothetical severe accident scenarios, nuclear power plant safety is challenged by core degradation and release of fission products. To aid the plant operator and technical support center staff, research has been performed to develop understanding of severe accident phenomenology, assessing their risk and devise measures to mitigate accident consequences (Sehgal, 2011). Nuclear power plant accidents involve highly complex physical and chemical interactions, a large number of safety related systems, and emergency operating procedures (EOP) and severe accident management guidelines (SAMG). Large number of factors with uncertainty and stress can overwhelm the operators. The overall objective of the present research is to develop a methodology and tools that an operator can use to predict severe accident progression and make effective decisions to arrest and manage the accident under large uncertainties. Towards this goal, this study examines a novel approach that brings to bear a combined use of techniques in artificial intelligence (Russel and Norvig, 2010), including Bayesian Network (BN), Answer Set Programming (ASP) and Fuzzy Inference (FI) to achieve faster-than-real-time, yet sufficiently accurate analysis of severe accident progression. Bayesian network (BN) is a type of probabilistic graphical models that can be used to represent knowledge and conditional dependencies about an uncertain realm. It is useful for capturing the causal relationships in a complex system. It also allows prediction via Bayesian inference (Kelly and Smith, 2012). It is composed of nodes and edges, which express random variables and probabilistic relationships between the nodes, respectively. This relationship, given by conditional probability is calculated using stochastic methods. The BN is used in several systems for analysis and management of accident risk; e.g. (Knochenhauer and Frid, 2010). In those systems, the nodes or so-called 'effective factors' are presumably known within the network by system descriptions in SAMGs. There are two steps to configure the BN, namely (i) identifying compositions within the network and (ii) defining conditional dependency between nodes. The first step is performed following the spirit of ASP (Baral, 2003) using Prolog (Wielemaker, 2005). Knowledge representation is used to build databases required for processing by ASP. Knowledge representation is defined as the expression of knowledge in a way that is understandable to both human and computers. Originally knowledge indicates data, information and facts. To focus, knowledge should be formed to achieve a goal. In a severe accident, key physics and safety related components status are defined according to a failure mode. The conditional dependencies between nodes are generated by approximate reasoning using Fuzzy inference (Zadeh, 1995). Fuzzy logic is a multiple-valued logic to treat ambiguous features such as linguistic description. It indicates possibility, which is distinguished from probability. Fuzzy set consists of linguistic variables according to the fixed rule. In other words, even uncertain states could be expressed as not binary logic, but as many-value logic by rule-based technology. Fuzzy control system is comprised of Fuzzy inference engine that is performed based on the 'If-Then Rule'. The 'If-Then Rule' is of the following form. If Y1 is B11 and Y2 is B12 then Z is C1. If Y1 is B21 and Y2 is B22 then Z is C2. Y1 and Y2 are inputs, which indicate conditional variables. Z indicates decision-making and both B and C are linguistic variables. With this rule-based technique, the approximate reasoning can be realized by Fuzzy inference. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

PowerAnalytics.jl: User-Centric Power Systems Analysis in Julia

The National Laboratory of the Rockies recently released version 1 of PowerAnalytics.jl, an analysis module for the outputs of its popular open-source electrical power systems modeling platform Sienna. It features an extensible framework - based on the flexible selecting of components, the execution of arbitrary metrics on them, and a familiar DataFrames-based output interface with embedded metadata - to process results in the Sienna style while keeping the interface as simple as possible for non-Julia experts. Here, I describe the package and where it fits into the Sienna ecosystem, how I harnessed user-centered design and Julia features to achieve beginner friendliness without sacrificing performance and expressibility, and what lessons might be drawn from the package's design and implementation.

97 MATHEMATICS AND COMPUTING↗

GDSCalc: A Web-Based Application for Evaluating Discrete Graph Dynamical Systems

Discrete dynamical systems are used to model various realistic systems in network science, from social unrest in human populations to regulation in biological networks. A common approach is to model the agents of a system as vertices of a graph, and the pairwise interactions between agents as edges. Agents are in one of a finite set of states at each discrete time step and are assigned functions that describe how their states change based on neighborhood relations. Full characterization of state transitions of one system can give insights into fundamental behaviors of other dynamical systems. In this work, we describe a discrete graph dynamical systems (GDSs) application called GDSCalc for computing and characterizing system dynamics. It is an open access system that is used through a web interface. We provide an overview of GDS theory. This theory is the basis of the web application; i.e., an understanding of GDS provides an understanding of the software features, while abstracting away implementation details. We present a set of illustrative examples to demonstrate its use in education and research. Finally, we compare GDSCalc with other discrete dynamical system software tools. Our perspective is that no single software tool will perform all computations that may be required by all users; tools typically have particular features that are more suitable for some tasks. We situate GDSCalc within this space of software tools.

97 MATHEMATICS AND COMPUTING↗

Collaborative Project: Building improved optimized parameter estimation algorithms to improve methane and nitrogen fluxes in a climate model

Soils in natural and managed ecosystems and wetlands are well known sources of methane, nitrous oxides, and reactive nitrogen gases, but the magnitudes of gas flux to the atmosphere are still poorly constrained. Thus, the reasons for the large increases in atmospheric concentrations of methane and nitrous oxide since the preindustrial time period are not well understood. The low atmospheric concentrations of methane and nitrous oxide, despite being more potent greenhouse gases than carbon dioxide, complicate empirical studies to provide explanations. In addition to climate concerns, the emissions of reactive nitrogen gases from soils are important to the changing nitrogen balance in the earth system, subject to human management, and may change substantially in the future. Thus improved modeling of the emission fluxes of these species from the land surface is important. Currently, there are emission modules for methane and some nitrogen species in the Community Earth System Model’s Community Land Model (CLM-ME/N); however, there are large uncertainties and problems in the simulations, resulting in coarse estimates. In this proposal, we seek to improve these emission modules by combining state-of-the-art process modules for emissions, available data, and new optimization methods. In earth science problems, we often have substantial data and knowledge of processes in disparate systems, and thus we need to combine data and a general process level understanding into a model for projections of future climate that are as accurate as possible. The best methodologies for optimization of parameters in earth system models are still being developed. In this proposal we will develop and apply surrogate algorithms that a) were especially developed for computationally expensive simulations like CLM-ME/N models; b) were (in the earlier surrogate optimization Stochastic RBF) demonstrated to perform very well on computationally expensive complex partial differential equations in earth science with limited numbers of simulations; and, c) will be (as part of the proposed research) significantly improved both by adding asynchronous parallelism, early truncation of unsuccessful simulations, and the improvement of both serial and parallel performance by the use of derivative and sensitivity information from global and local surrogate approximations S(x) . The algorithm development and testing will be focused on the CLM-ME/N model application, but the methods are general and are expected to also perform well on optimization for parameter estimation of other climate models and other classes of continuous multimodal optimization problems arising from complex simulation models. In addition, this proposal will compile available datasets of emissions of methane, nitrous oxides and reactive nitrogen species and develop protocols for site level comparisons with the CLM-ME/N. Once the model parameters are optimized against site level data, the model will be simulated at the global level and compared to atmospheric concentration measurements for the current climate, and future emissions will be estimated using climate change as simulated by the CESM. This proposal combines experts in earth system modeling, optimization, computer science, and process level understanding of soil gas emissions in an interdisciplinary team in order to improve the modeling of methane and nitrogen gas emissions. This proposal thus meets the requirements of the SciDAC RFP, by integrating state-of-the-art computer science and earth system to build an improved earth system model.

54 ENVIRONMENTAL SCIENCES↗

TH-CD-202-07: A Methodology for Generating Numerical Phantoms for Radiation Therapy Using Geometric Attribute Distribution Models

Purpose: A persistent challenge for the quality assessment of radiation therapy treatments (e.g. contouring accuracy) is the absence of the known, ground truth for patient data. Moreover, assessment results are often patient-dependent. Computer simulation studies utilizing numerical phantoms can be performed for quality assessment with a known ground truth. However, previously reported numerical phantoms do not include the statistical properties of inter-patient variations, as their models are based on only one patient. In addition, these models do not incorporate tumor data. In this study, a methodology was developed for generating numerical phantoms which encapsulate the statistical variations of patients within radiation therapy, including tumors. Methods: Based on previous work in contouring assessment, geometric attribute distribution (GAD) models were employed to model both the deterministic and stochastic properties of individual organs via principle component analysis. Using pre-existing radiation therapy contour data, the GAD models are trained to model the shape and centroid distributions of each organ. Then, organs with different shapes and positions can be generated by assigning statistically sound weights to the GAD model parameters. Organ contour data from 20 retrospective prostate patient cases were manually extracted and utilized to train the GAD models. As a demonstration, computer-simulated CT images of generated numerical phantoms were calculated and assessed subjectively and objectively for realism. Results: A cohort of numerical phantoms of the male human pelvis was generated. CT images were deemed realistic both subjectively and objectively in terms of image noise power spectrum. Conclusion: A methodology has been developed to generate realistic numerical anthropomorphic phantoms using pre-existing radiation therapy data. The GAD models guarantee that generated organs span the statistical distribution of observed radiation therapy patients, according to the training dataset. The methodology enables radiation therapy treatment assessment with multi-modality imaging and a known ground truth, and without patient-dependent bias.

60 APPLIED LIFE SCIENCES↗

Spatially Explicit Modeling of Criteria Air Pollutants from Agricultural and Forestry Feedstock Production

The Feedstock Production Emissions to Air Model (FPEAM) is a spatially explicit supply chain model that quantifies criteria air pollutants and precursors generated by biomass production, harvest and transportation to biorefineries. FPEAM was most recently used for the 2016 Billion Ton Study (BTS) published by the U.S. Department of Energy Bioenergy Technologies Office. This presentation describes several use cases for the model, and provides an overview of recent restructuring that increases FPEAM's usability and functionality. FPEAM currently estimates emissions of volatile organic compounds, particulate matter, nitrogen oxides, sulfur oxides, and carbon monoxide from on-farm equipment operation, on-farm fugitive dust, on-farm chemical (fertilizer, herbicide and insecticide) application, and biomass transportation. These calculations are implemented within FPEAM as modules, which independently perform calculations for each emissions category. This structure allows users to include or exclude emissions categories according to the goal and scope of their analysis. Each module's input data defines the activities taking place with information including fuel combusted, chemicals applied, and equipment used. Users can replace or augment the default input data to quantify additional pollutant types, emissions categories, farming practices and biomass types. Emissions from biomass transportation and on-farm equipment operation are by default calculated by the U.S. Environmental Protection Agency's Motor Vehicle Emission Simulator (MOVES) and NONROAD model, respectively. These models - which are computationally intensive but provide detailed results - can optionally be replaced with user-provided emissions factors for fuel combustion and vehicle operation. This approach reduces FPEAM's runtime and allows users to run sensitivity analyses around biomass production and transportation scenarios. Other enhancements currently under development are the use of farm-to-biorefinery route information to increase the spatial resolution of transportation emissions, and a module to connect FPEAM and the Intervention Model for Air Pollution (InMAP), which will enable the quantification of human health impacts.

09 BIOMASS FUELS↗

Trade-offs between individual and ensemble forecasts of an emerging infectious disease

Probabilistic forecasts play an indispensable role in answering questions about the spread of newly emerged pathogens. However, uncertainties about the epidemiology of emerging pathogens can make it difficult to choose among alternative model structures and assumptions. To assess the potential for uncertainties about emerging pathogens to affect forecasts of their spread, we evaluated the performance 16 forecasting models in the context of the 2015-2016 Zika epidemic in Colombia. Each model featured a different combination of assumptions about human mobility, spatiotemporal variation in transmission potential, and the number of virus introductions. We found that which model assumptions had the most ensemble weight changed through time. We additionally identified a trade-off whereby some individual models outperformed ensemble models early in the epidemic, but on average the ensembles outperformed all individual models. Our results suggest that multiple models spanning uncertainty across alternative assumptions are necessary to obtain robust forecasts for emerging infectious diseases.

60 APPLIED LIFE SCIENCES↗

Loosely Conditioned Emulation of Global Climate Models With Generative Adversarial Networks

Climate models encapsulate our best understanding of the Earth system, allowing research to be conducted on its future under alternative assumptions of how human-driven climate forces are going to evolve. An important application of climate models is to provide metrics of mean and extreme climate changes, particularly under these alternative future scenarios, as these quantities drive the impacts of climate on society and natural systems. Because of the need to explore a wide range of alternative scenarios and other sources of uncertainties in a computationally efficient manner, climate models can only take us so far, as they require significant computational resources, especially when attempting to characterize extreme events, which are rare and thus demand long and numerous simulations in order to accurately represent their changing statistics. Here we use deep learning in a proof of concept that lays the foundation for emulating global climate model output for different scenarios. We train two "loosely conditioned" Generative Adversarial Networks (GANs) that emulate daily precipitation output from a fully coupled Earth system model: one GAN modeling Fall-Winter behavior and the other Spring-Summer. Our GANs are trained to produce spatiotemporal samples: 32 days of precipitation over a 64x128 regular grid discretizing the globe. We evaluate the generator with a set of related performance metrics based upon KL divergence, and find the generated samples to be nearly as well matched to the test data as the validation data is to test. We also find the generated samples to accurately estimate the mean number of dry days and mean longest dry spell in the 32 day samples. Our trained GANs can rapidly generate numerous realizations at a vastly reduced computational expense, compared to large ensembles of climate models, which greatly aids in estimating the statistics of extreme events.

climate emulation, extreme climate, impacts, machi↗

Research on the ATLAS Experiment at the University of Illinois: Final Report

The goal of particle physics is to understand the Universe at its most fundamental level, including the constituents of matter and their interactions, and the nature of space and time itself. The quest to understand the fundamental building blocks of nature, and their interactions, is one of the most ambitious and enduring of human endeavors. Recent developments in particle physics and cosmology raise the exciting prospect that we are on the threshold of a major step forward in this pursuit. Facilities such as CERN's Large Hadron Collider (LHC) provide a unique window into the subatomic world to pursue this understanding. Mark Neubauer and his research group at the University of Illinois were supported over a nine-month period (07/01/2017 through 03/31/2018) to perform high-energy particle physics research on the ATLAS experiment at the LHC. The primary focus of this research was to search for physics beyond the standard model through an analysis of high-energy proton-proton collision data from the ATLAS experiment, with an emphasis on the Higgs boson as a sensitive tool for this search, and development of fast particle tracking systems for use the ATLAS trigger system.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Implementing computer-based procedures: thinking outside the paper margins - 236

In the past year there has been increased interest from the nuclear industry in adopting the use of electronic work packages and computer-based procedures (CBPs) in the field. The goal is to incorporate the use of technology in order to meet the Nuclear Promise requirements of reducing costs, and improving efficiency and decreasing human error rates in plant operations. Researchers, together with the nuclear industry, have been investigating the benefits of an electronic work package system and specifically CBPs would have over current paper-based procedure practices. There are several classifications of CBPs ranging from a straight copy of the paper-based procedure in PDF format to a more intelligent dynamic CBP. A CBP system offers a vast variety of potential improvements, such as context driven job aids, integrated human performance tools (e.g., place-keeping and correct component verification), and dynamic step presentation. However, the implementation of a CBP system does not automatically improve the quality of procedures. Utilities should review, standardize format and update current procedure content before transitioning to a computerized process. Implementation of a CBP system can be a time to break out of traditional procedure writing processes and create new processes and procedures that take advantage of the capabilities a CBP system. This paper summarizes INL research findings related to challenges with implementing a CBP system and provides suggestions to take into consideration. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

The Trillion Pixel GeoAI Challenge Workshop

Rapid innovations in satellite and airborne remote sensing capabilities holds the promise of collecting high-resolution imagery with daily, even hourly cadence across the entire planet. Availability of such earth observation data streams at varying spatial and temporal scales, coupled with astonishing progress in AI and transformational advances in high performance computing bring into view the possibility of mapping and interpreting the surface of our planet at unprecedented detail. The implications of such capability for science, technology, policy, and security are far reaching. Moreover, even at a modest 5m resolution, 100 trillion pixels will describe the surface of the Earth every day. Consequently, monitoring the pulse of our planet will entail collecting, refining, analyzing, and curating those 100 trillion pixels within a 24-hour period. That is a challenge with unknown solutions as of today’s advances and therefore serves as a key motivation for this workshop. The GEOINT and AI communities have a unique opportunity to enable detailed monitoring the pulse of our planet and obtain new insights into how humans occupy, interact with, and alter the surface of the Earth over time. From a science and technology standpoint, this is a modern-day moonshot that presents numerous challenges particularly related to scaling the analysis to every pixel covering the planet. The challenge of making sense of all these pixels in a timely fashion include image processing at scale, selective analysis of only the pixels that matter, generalizing AI models across heterogeneous locations, computing on hardware that is memory constrained, and deploying automated feature extraction on edge devices. The designing of capable GeoAI workflows and data pipelines will require interdisciplinary efforts and partnerships. The Trillion Pixel Challenge for GeoAI workshop was is promoted as a first community effort to discuss priority research and development directions and to establish the partnerships and collaborations needed to make progress on critical scientific and operational applications from local to regional to planet scale.

97 MATHEMATICS AND COMPUTING↗

Utilizing the SACADA system to collect simulator training data to inform human reliability analyses - 169

Lack of appropriate human performance data for the development of human reliability analysis (HRA) methods has been identified as a key issue contributing to the method-to-method variability among the HRA methods. The United States Nuclear Regulatory Commission (NRC) worked with domain experts to develop the Scenario Authoring, Characterization, and Debriefing Application (SACADA) system to collect nuclear power plants' licensed operator simulator training and examination data to inform HRA. In the past two decades, significant improvements in understanding and modelling human performance in HRA have affected the perspectives of the types of data to be collected for HRA. A significant change is that human performance is strongly dependent on the context of the tasks to be performed. To incorporate this understanding, the SACADA data taxonomy collects the context and actual performance information of the training objective elements (TOEs) in nuclear plant operator simulator training. This provides a framework consistent with HRA to use context to estimate human error probabilities. It is recognized that measuring crew performance is equally important as improving operator training. SACADA is designed to support the nuclear trainers in capturing this important information that is used to identify training weaknesses and drive continuous improvement. This paper discusses the SACADA taxonomy, the SACADA system's functions, and the supporting software design to enable the SACADA system to be practically implemented in the nuclear power plants' operator simulator training program to collect data for tracking operator performance and HRA analysis. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Synchronized multiartifact reduction with tomographic reconstruction (SMART-RECON): A statistical model based iterative image reconstruction method to eliminate limited-view artifacts and to mitigate the temporal-average artifacts in time-resolved CT

Purpose: In x-ray computed tomography (CT), a violation of the Tuy data sufficiency condition leads to limited-view artifacts. In some applications, it is desirable to use data corresponding to a narrow temporal window to reconstruct images with reduced temporal-average artifacts. However, the need to reduce temporal-average artifacts in practice may result in a violation of the Tuy condition and thus undesirable limited-view artifacts. In this paper, the authors present a new iterative reconstruction method, synchronized multiartifact reduction with tomographic reconstruction (SMART-RECON), to eliminate limited-view artifacts using data acquired within an ultranarrow temporal window that severely violates the Tuy condition. Methods: In time-resolved contrast enhanced CT acquisitions, image contrast dynamically changes during data acquisition. Each image reconstructed from data acquired in a given temporal window represents one time frame and can be denoted as an image vector. Conventionally, each individual time frame is reconstructed independently. In this paper, all image frames are grouped into a spatial–temporal image matrix and are reconstructed together. Rather than the spatial and/or temporal smoothing regularizers commonly used in iterative image reconstruction, the nuclear norm of the spatial–temporal image matrix is used in SMART-RECON to regularize the reconstruction of all image time frames. This regularizer exploits the low-dimensional structure of the spatial–temporal image matrix to mitigate limited-view artifacts when an ultranarrow temporal window is desired in some applications to reduce temporal-average artifacts. Both numerical simulations in two dimensional image slices with known ground truth and in vivo human subject data acquired in a contrast enhanced cone beam CT exam have been used to validate the proposed SMART-RECON algorithm and to demonstrate the initial performance of the algorithm. Reconstruction errors and temporal fidelity of the reconstructed images were quantified using the relative root mean square error (rRMSE) and the universal quality index (UQI) in numerical simulations. The performance of the SMART-RECON algorithm was compared with that of the prior image constrained compressed sensing (PICCS) reconstruction quantitatively in simulations and qualitatively in human subject exam. Results: In numerical simulations, the 240{sup ∘} short scan angular span was divided into four consecutive 60{sup ∘} angular subsectors. SMART-RECON enables four high temporal fidelity images without limited-view artifacts. The average rRMSE is 16% and UQIs are 0.96 and 0.95 for the two local regions of interest, respectively. In contrast, the corresponding average rRMSE and UQIs are 25%, 0.78, and 0.81, respectively, for the PICCS reconstruction. Note that only one filtered backprojection image can be reconstructed from the same data set with an average rRMSE and UQIs are 45%, 0.71, and 0.79, respectively, to benchmark reconstruction accuracies. For in vivo contrast enhanced cone beam CT data acquired from a short scan angular span of 200{sup ∘}, three 66{sup ∘} angular subsectors were used in SMART-RECON. The results demonstrated clear contrast difference in three SMART-RECON reconstructed image volumes without limited-view artifacts. In contrast, for the same angular sectors, PICCS cannot reconstruct images without limited-view artifacts and with clear contrast difference in three reconstructed image volumes. Conclusions: In time-resolved CT, the proposed SMART-RECON method provides a new method to eliminate limited-view artifacts using data acquired in an ultranarrow temporal window, which corresponds to approximately 60{sup ∘} angular subsectors.

60 APPLIED LIFE SCIENCES↗

GIScience in the era of Artificial Intelligence: a research agenda towards Autonomous GIS

The advent of generative AI exemplified by large language models (LLMs) opens new ways to represent and compute geographic information and transcends the process of geographic knowledge production, driving geographic information systems (GIS) towards autonomous GIS. Leveraging LLMs as the decision core, autonomous GIS can independently generate and execute geoprocessing workflows to perform spatial analysis. In this vision paper, we further elaborate on the concept of autonomous GIS and present a conceptual framework that defines its five autonomous goals, five levels of autonomy, five core functions, and three operational scales. We demonstrate how autonomous GIS could perform geospatial data retrieval, spatial analysis, and map making with four proof-of-concept GIS agents. We conclude by identifying critical challenges and future research directions, including fine-tuning and self-growing decision-cores, autonomous modelling, and examining the societal and practical implications of autonomous GIS. By establishing the groundwork for a paradigm shift in GIScience, this paper envisions a future where GIS moves beyond traditional workflows to autonomously reason, derive, innovate, and advance geospatial solutions to pressing global challenges. Meanwhile, we emphasize that as we design and deploy increasingly intelligent geospatial systems, we carry a responsibility to ensure they are developed in socially responsible ways, serve the public good, and support the continued value of human geographic insight in an AI-augmented future.

Autonomous GI↗

Investigating Kinetic Mechanisms of Soot Formation in Plasma Pyrolysis of Methane via Active Learning (Final Technical Report)

Plasma pyrolysis of methane is an effective route for zero-carbon hydrogen production. Yet, soot generated from pyrolysis of hydrocarbons is detrimental to the climate and human health. There is ample experimental and theoretical evidence that suggests polycyclic aromatic hydrocarbons (PAHs) are the molecular precursors to soot particles. The reaction pathways of PAH formation are intricately dependent on a multitude of process parameters, whose kinetic mechanisms are not well-understood in plasma pyrolysis. This project aims to leverage advances in the kinetic modeling of soot formation in combustion, as well as in surrogate modeling and active learning, to systematically investigate the effects of process parameter on the kinetics of PAH formation in plasma pyrolysis of methane. To this end, we propose to use the PAH formation kinetics model developed by the PPPL/PU group based on the well-established ABF and HACA mechanisms, coupled with low-temperature plasma models. We will develop an active learning (AL) framework based on Bayesian optimization to systematically and data-efficiently explore the complex and multivariable parameter space of plasma pyrolysis in order to quantify the effects of plasma and feed parameters on the ABF and HACA kinetic pathways. AL is the branch of machine learning concerned with systematically querying samples from a system (experimental or computational) to train a data-driven model that maps design parameters to a performance criterion. We will use the data generated via AL to perform global sensitivity analysis, combined with uncertainty quantification, to elucidate the impact of different reaction pathways on minimizing formation of soot precursors. This study will result in an improved understanding of kinetics of PAH formation in plasma pyrolysis and can pave the way for more advanced mechanistic studies (e.g., soot nucleation mechanisms). Additionally, the findings will be useful for establishing practical strategies for increasing the pyrolysis efficiency and producing high-grade carbon for synthesis of nanomaterials.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗