Search NASA⌕ Search

SEARCH · Search NASA

Results for “Subtraction Technique”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 307 records · Page 17
All sourcesNASA NTRSDOE OSTI
NASA NTRSDate not supplied

LIPA: Lunar Ice Perception Algorithm

The highest concentration of Lunar water-ice stores exists within the Permanently Shadowed Regions (PSRs) of the Lunar South Pole. As such, the ability to locate in situ water-ice stores in an accurate, systematic, and safe manner will prove vital for future Lunar activities which rely on hydrogen-based resources. Here we show how the strong absorptive properties of ice can be exploited (by coupling robotics, infrared imaging techniques, and machine learning) so that surface frost located in PSRs can be easily differentiated from the surrounding frozen regolith. Testbeds which simulate an icy lunar landscape were created and then imaged using a mid-wave infrared (MWIR) camera system mounted to a robotic arm (UR5e). Testbeds were imaged under two filter modes (1) wide band mode: whereby imagery captured filled a spectral range of 3.0 - 5.0 μm and (2) narrow band mode: whereby imagery captured were confined to a single central wavelength (CWL) of 3.15 ± 0.03 μm. A CWL of 3.15 μm was chosen due to the highly absorptive nature of ice at that specific wavelength. Images produced under both camera modes were processed in MATLAB. Narrow band images (NB) were subtracted from their wide band (WB) counterparts to produce differenced images (DI) which clearly demonstrated the spatial extent of ice (e.g., WB – NB = DI). Differenced images were used to train a Microsoft Azure model to discriminate between frozen regolith which did and did not contain ice. These works prove promising for future in situ resource utilization (ISRU) missions which employ robotics in combination with camera systems to advance science objectives (e.g., locate water-ice in frozen regolith) on the lunar surface.

Ane Slabic↗
NASA NTRS2022

JWST/MIRI Coronagraphic Performances as Measured on-Sky

Context . Characterization of directly imaged exoplanets is one of the most eagerly anticipated science functions of the James Webb Space Telescope . MIRI, the mid-IR instrument, has the capability to provide unique spatially resolved photometric data points in a spectral range never before achieved for such objects. Aims . We aim to present the very first on-sky contrast measurements of the MIRI coronagraphs. In addition to a classical Lyot coronagraph at the longest wavelength, this observing mode implements the concept of the four-quadrant phase mask for the very first time in a space telescope. Methods . We observed single stars together with a series of reference stars to measure raw contrasts as they are delivered on the detector, as well as reference-subtracted contrasts. Results . The MIRI coronagraphs achieve raw contrasts better than 10 −3 at the smallest angular separations (within 1″) and about 10 −5 farther out (beyond 5 ~ 6″). Subtracting the residual diffracted light left behind the coronagraph has the potential to bring the final contrast down to the background- and detector-limited noise floor at most angular separations (a few times 10 −5 at less than 1″). Conclusions . The MIRI coronagraphs behave as expected from simulations. In particular, the raw contrasts for all four coronagraphs are fully consistent with the diffractive model. Contrasts obtained by subtracting reference stars also meet expectations and are fully demonstrated for two four-quadrant phase masks (F1065C and F1140C). The worst contrast, measured at F1550C, is very likely due to a variation in the phase aberrations at the primary mirror during the observations, and not an issue with the coronagraph itself. We did not perform reference star subtraction with the Lyot mask at F2300C, but we anticipate that it would bring the contrast down to the noise floor.

High angular resolution instrumentation↗
NASA NTRS1995

The use of ion mobility spectrometry and gas chromatography/mass spectrometry for the detection of illicit drugs on clandestine records

Illicit drug distribution has over the past decade grown tremendously from simple 'drug pushing' where drugs were distributed from poorly organized individuals to today's well organized and well financed drug cartels. This change to a more 'corporate-like' atmosphere has resulted in a greater use of record keeping to monitor the profits generated. The use of record keeping by drug distributors is not restricted to high level drug smugglers but is used at all levels within the distribution network. Dealers at all levels including street dealers are generally 'fronted', given on consignment quantities of drugs that they in turn sell to customers, thereby requiring the need for records to keep track of drug sales versus liabilities. These records because of their illicit nature are often encrypted to hide the fact that they are indeed records of drug transactions. The creation of a handwritten notation concerning a drug transaction is normally brought on because of a purchase or sale. In a sale, this is commonly accomplished through a consignment, or the designation of a quantity to a customer to whom that amount has been 'fronted'. Because this activity generates a debt, it follows that an accounting for payments made, as well as new transactions completed, is only logical. One of the most common means of representing these is through an 'accounting flow', in which payments are subtracted from a running balance while new sales are added to it. The examination of illicit drug records has been the key to the prosecution of numerous federal, state, and local drug cases for a number of years. The Document Section of the FBI Laboratory, through its Racketeering Records Analysis Unit (RRAU), has been involved in such analytical efforts since 1983. Detailed analytical research brought about an evolution in the systematic approach utilized in the RRAU since that time. The close proximity of the drugs to the records often results in trace drug evidence being transferred to the records. The detection of trace drug residue on surfaces by ion mobility spectrometry (IMS) is well documented in literature. The following procedure will deal primarily with the newer techniques of trace drug analysis and drug record analysis developed by the Chemistry/Toxicology Unit of the FBI Laboratory since the more traditional techniques of latent finger print analysis and document analysis are well known.

Donnelly, Brian↗
DOE OSTI2020

Horizons of modern molecular dynamics simulation in digitalized solid freeform fabrication with advanced materials

Our ability to shape and finish a component by combined methods of fabrication including (but not limited to) subtractive, additive and/or no theoretical mass-loss/addition during the fabrication is now popularly known as solid free form fabrication. Fabrication of a telescope mirror is a typical example where grinding and polishing processes are first applied to shape the mirror and thereafter an optical coating is usually applied to enhance its optical performance. The area of nanomanufacturing cannot grow without a deep knowledge of the fundamentals of materials and consequently, the use of computer simulations is becoming ubiquitous. This article is intended to introduce the most recent advances in the computation benefit specific to the area of solid free form fabrication as these systems are traversing through the journey of digitalisation and Industry-4.0. Specifically, this article demonstrates that the application of the latest materials modelling approaches, based on techniques such as molecular dynamics, are enabling breakthroughs in applied precision manufacturing techniques.

36 MATERIALS SCIENCE↗
DOE OSTI2023

Vision-based localization for cooperative robot-CNC hybrid manufacturing

Wire and arc additive manufacturing (WAAM) has shown promise in recent years for producing large-scale parts with higher deposition rates than other additive processes. WAAM is often combined with subtractive machining to form a hybrid manufacturing process. This hybrid process can be realized by retrofitting computer numerical control (CNC) machines with deposition heads, adding spindles and deposition heads to robots, or developing part localization methods to transfer parts from an additive cell to a CNC machine. Here, a novel, robot-CNC hybrid configuration is introduced where a maneuverable robot is placed in front of a CNC machine to deposit material within the machine envelop. Furthermore, this method removes the need for part localization and the extensive machine modifications required for retrofitting; however, the problem of robot localization is also added. In this work, the effects of error in vision-based, contactless robot localization on machining parameters in a robot-machine hybrid process were studied. Performance was characterized on an implementation of this system using classical computer vision techniques. In addition, machining simulations were conducted to evaluate the effects of image-induced error on chip thickness, material removal rate, and machining allowance. Initial tests show that computer vision could adequately locate a robot for the hybrid WAAM process within .5 mm.

Hybrid manufacturing↗
NASA NTRS2003

Blind Leak Detection for Closed Systems

The current inspection technique for locating interstitial leaking in the Space Shuttle Main Engine nozzles is the application of a liquid leak check solution in the openings where the interstitials space between the tubing and the structural jacket vent out the aft end of the nozzle, while its cooling tubes are pressurized to 25 psig with Helium. When a leak is found, it is classified, and if the leak is severe enough the suspect tube is cut open so that a boroscope can be inserted to find the leak point. Since the boroscope can only cover a finite tube length and since it is impossible to identify which tube (to the right or left of the identified interstitial) is leaking, many extra and undesired repairs have been made to fix just one leak. In certain instances when the interstitials are interlinked by poor braze bonding, many interstitials will show indications of leaking from a single source. What is desired is a technique that can identify the leak source so that a single repair can be performed. Dr, Samuel Russell and James Walker, both with NASA/MSFC have developed a thermographic inspection system that addresses a single repair approach. They have teamed with Boeing/Rocketdyne to repackage the inspection processes to be suitable to address full scale Shuttle development and flight hardware and implement the process at NASA centers. The methods and results presented address the thermographic identification of interstitial leaks in the Space Shuttle Main Engine nozzles. A highly sensitive digital infrared camera (capable of detecting a delta temperature difference of 0.025 C) is used to record the cooling effects associated with a leak source, such as a crack or pinhole, hidden within the nozzle wall by observing the inner hot wall surface as the nozzle is pressurized, These images are enhanced by digitally subtracting a thermal reference image taken before pressurization. The method provides a non-intrusive way of locating the tube that is leaking and the exact leak source position to within a very small axial distance. Many of the factors that influence the inspectability of the nozzle are addressed; including pressure rate, peak pressure, gas type, ambient temperature and surface preparation. Other applications for this thermographic inspection system are the Reinforced-Carbon-Carbon (RCC) leading edge of the Space Shuttle orbiter and braze joint integrity.

Oelgoetz, Peter↗
NASA NTRS2017

Baseline-Subtraction-Free (BSF) Damage-Scattered Wave Extraction for Stiffened Isotropic Plates

Lamb waves enable long distance inspection of structures for health monitoring purposes. However, this capability is diminished when applied to complex structures where damage-scattered waves are often buried by scattering from various structural components or boundaries in the time-space domain. Here, a baseline-subtraction-free (BSF) inspection concept based on the Radon transform (RT) is proposed to identify and separate these scattered waves from those scattered by damage. The received time-space domain signals can be converted into the Radon domain, in which the scattered signals from structural components are suppressed into relatively small regions such that damage-scattered signals can be identified and extracted. In this study, a piezoelectric wafer and a linear scan via laser Doppler vibrometer (LDV) were used to excite and acquire the Lamb-wave signals in an aluminum plate with multiple stiffeners. Linear and inverse linear Radon transform algorithms were applied to the direct measurements. The results demonstrate the effectiveness of the Radon transform as a reliable extraction tool for damage-scattered waves in a stiffened aluminum plate and also suggest the possibility of generalizing this technique for application to a wide variety of complex, large-area structures.

He, Jiaze↗
NASA NTRS1997

Background contamination by coplanar polychlorinated biphenyls (PCBs) in trace level high resolution gas chromatography/high resolution mass spectrometry (HRGC/HRMS) analytical procedures

The addition of the "dioxin-like" polychlorinated biphenyl (PCB) congeners to the assessment of risk associated with the 2,3,7,8-chlorine substituted dioxins and furans has dramatically increased the number of laboratories worldwide that are developing analytical procedures for their detection and quantitation. Most of these procedures are based on established sample preparation and analytical techniques employing high resolution gas chromatography/high resolution mass spectrometry (HRGC/HRMS), which are used for the analyses of dioxin/furans at low parts-per-trillion (ppt) levels. A significant and widespread problem that arises when using these sample preparation procedures for the analysis of coplanar PCBs is the presence of background levels of these congeners. Industrial processes, urban incineration, leaking electrical transformers, hazardous waste accidents, and improper waste disposal practices have released appreciable quantities of PCBs into the environment. This contamination has resulted in the global distribution of these compounds via the atmosphere and their ubiquitous presence in ambient air. The background presence of these compounds in method blanks must be addressed when determining the exact concentrations of these and other congeners in environmental samples. In this study reliable procedures were developed to accurately define these background levels and assess their variability over the course of the study. The background subtraction procedures developed and employed increase the probability that the values reported accurately represent the concentrations found in the samples and were not biased due to this background contamination.

Polychlorinated Biphenyls/analysis/metabolism↗
NASA NTRS1984

Approaches to optimization of SS/TDMA time slot assignment

Reduction techniques for traffic matrices are explored in some detail. These matrices arise in satellite switched time-division multiple access (SS/TDMA) techniques whereby switching of uplink and downlink beams is required to facilitate interconnectivity of beam zones. A traffic matrix is given to represent that traffic to be transmitted from n uplink beams to n downlink beams within a TDMA frame typically of 1 ms duration. The frame is divided into segments of time and during each segment a portion of the traffic is represented by a switching mode. This time slot assignment is characterized by a mode matrix in which there is not more than a single non-zero entry on each line (row or column) of the matrix. Investigation is confined to decomposition of an n x n traffic matrix by mode matrices with a requirement that the decomposition be 100 percent efficient or, equivalently, that the line(s) in the original traffic matrix whose sum is maximal (called critical line(s)) remain maximal as mode matrices are subtracted throughout the decomposition process. A method of decomposition of an n x n traffic matrix by mode matrices results in a number of steps that is bounded by n(2) - 2n + 2. It is shown that this upper bound exists for an n x n matrix wherein all the lines are maximal (called a quasi doubly stochastic (QDS) matrix) or for an n x n matrix that is completely arbitrary. That is, the fact that no method can exist with a lower upper bound is shown for both QDS and arbitrary matrices, in an elementary and straightforward manner.

Wade, T. O.↗
NASA NTRS2005

Path Following with Slip Compensation for a Mars Rover

A software system for autonomous operation of a Mars rover is composed of several key algorithms that enable the rover to accurately follow a designated path, compensate for slippage of its wheels on terrain, and reach intended goals. The techniques implemented by the algorithms are visual odometry, full vehicle kinematics, a Kalman filter, and path following with slip compensation. The visual-odometry algorithm tracks distinctive scene features in stereo imagery to estimate rover motion between successively acquired stereo image pairs, by use of a maximum-likelihood motion-estimation algorithm. The full-vehicle kinematics algorithm estimates motion, with a no-slip assumption, from measured wheel rates, steering angles, and angles of rockers and bogies in the rover suspension system. The Kalman filter merges data from an inertial measurement unit (IMU) and the visual-odometry algorithm. The merged estimate is then compared to the kinematic estimate to determine whether and how much slippage has occurred. The kinematic estimate is used to complement the Kalman-filter estimate if no statistically significant slippage has occurred. If slippage has occurred, then a slip vector is calculated by subtracting the current Kalman filter estimate from the kinematic estimate. This slip vector is then used, in conjunction with the inverse kinematics, to determine the wheel velocities and steering angles needed to compensate for slip and follow the desired path.

Helmick, Daniel↗
DOE OSTI2022

Galaxy morphologies revealed with Subaru HSC and super-resolution techniques. I. Major merger fractions of L UV ∼ 3–15 L*UV dropout galaxies at z ∼ 4–7

Abstract We perform a super-resolution analysis of the Subaru Hyper Suprime-Cam (HSC) images to estimate the major merger fractions of z ∼ 4–7 dropout galaxies at the bright end of galaxy UV luminosity functions (LFs). Our super-resolution technique improves the spatial resolution of the ground-based HSC images, from ∼1″ to $\lesssim \!\!{0{^{\prime \prime }_{.}}1}$, which is comparable to that of the Hubble Space Telescope, allowing us to identify z ∼ 4–7 bright major mergers at a high completeness value of $\gtrsim \!\!90\%$. We apply the super-resolution technique to 6412, 16, 94, and 13 very bright dropout galaxies at z ∼ 4, 5, 6, and 7, respectively, in a UV luminosity range of LUV ∼ 3–$15\, L_{\rm UV}^*$ corresponding to −24 ≲ MUV ≲ −22. The major merger fractions are estimated to be $f_{\rm merger}\sim 10\%$–$20\%$ at z ∼ 4 and $\sim 50\%$–$70\%$ at z ∼ 5–7, which shows no fmerger difference compared to those of a control faint galaxy sample. Based on the fmerger estimates, we verify contributions of source blending effects and major mergers to the bright-end of double power-law (DPL) shape of z ∼ 4–7 galaxy UV LFs. While these two effects partly explain the DPL shape at LUV ∼ 3–$10\, L_{\rm UV}^*$, the DPL shape cannot be explained at the very bright end of $L_{\rm UV}\gtrsim 10\, L_{\rm UV}^*$, even after the AGN contribution is subtracted. The results support scenarios in which other additional mechanisms such as insignificant mass quenching and low dust obscuration contribute to the DPL shape of galaxy UV LFs.

Shibuya, Takatoshi↗
DOE OSTI2023

Sky subtraction in an era of low surface brightness astronomy

ABSTRACT The Vera C. Rubin Observatory Wide-Fast Deep sky survey will reach unprecedented surface brightness depths over tens of thousands of square degrees. Surface brightness photometry has traditionally been a challenge. Current algorithms which combine object detection with sky estimation systematically oversubtract the sky, biasing surface brightness measurements at the faint end and destroying or severely compromising low surface brightness light. While it has recently been shown that properly accounting for undetected faint galaxies and the wings of brighter objects can in principle recover a more accurate sky estimate, this has not yet been demonstrated in practice. Obtaining a consistent spatially smooth underlying sky estimate is particularly challenging in the presence of representative distributions of bright and faint objects. In this paper, we use simulations of crowded and uncrowded fields designed to mimic Hyper Suprime-Cam data to perform a series of tests on the accuracy of the recovered sky. Dependence on field density, galaxy type, and limiting flux for detection are all considered. Several photometry packages are utilized: source extractor, gnuastro, and the LSST science pipelines. Each is configured in various modes, and their performance at extreme low surface brightness analysed. We find that the combination of the source extractor software package with novel source model masking techniques consistently produce extremely faint output sky estimates, by up to an order of magnitude, as well as returning high fidelity output science catalogues.

Astronomy & Astrophysics↗
NASA NTRS2007

OMI Tropospheric NO2 from Lightning in Observed Convective Events

Lightning is responsible for an estimated 15 percent of total NO emissions, and is one of the most prominent sources in the upper troposphere. In this study, we present evidence of lightning-generated NO2 (LNO2) using data from the Ozone Monitoring Instrument (OMI), which has observed tropospheric NO2 since its launch in 2004. Although LNO2 has been also reported in previous satellite studies from the Global Ozone Monitoring Experiment (GOME) and SCIAMACHY, OMI is better suited for such measurements by virtue of its higher spatial resolution and daily global coverage. We will present data clearly showing the LNO2 signal in the OMI tropospheric NO2 product on two days over and downwind of specific convective systems in the US Midwest. Gridded monthly mean tropospheric NO 2 data are subtracted from the daily gridded data to obtain the presumed LNO2 signal. Observed cloud-to-ground (CG) lightning flashes from the National Lightning Detection Network (NLDN) were counted along middle and upper tropospheric back trajectories that were run from the regions containing the LNO2 signal. A vertically-weighted average number of upwind CG flashes was obtained using a profile of LNO(x) mass obtained from a series of midlatitude cloud-resolved storm chemistry simulations. The number of CG flashes was scaled up to total flashes (intracloud (IC) flashes plus CG) using a climatological IC/CG ratio. The number of moles of LNO(x) in the region considered was estimated by assuming that LNO2 is 30 percent of LNO(x). This value was divided by the number of upwind flashes to obtain an average estimate of the number of moles produced per flash. Results yield values in the range obtained through other estimation techniques (e.g., aircraft measurements, models). We will also present a similar analysis over northern Australia during the SCOUT-O3/ACTIVE field campaigns in November and December 2005, in which we will compare the OMI LNOx signals with aircraft observations from the storm anvils.

Pickering, Kenneth↗
DOE OSTI2020

Electric field dynamics in an atmospheric pressure helium plasma jet impinging on a substrate

Time and spatially resolved electric field measurements by Stark polarization spectroscopy in a nanosecond pulsed atmospheric pressure helium jet operating in ambient air and impinging on a conductive indium tin oxide (ITO) coated glass slide are reported. An automatic fitting procedure of the Stark shifted spectra taking into consideration constraints regarding Stark components positions and intensities as well as molecular nitrogen emission subtraction was implemented. This allowed electric field vector components measurements both in the gas phase and at the interface when the jet impinges on the substrate and during the development of a surface ionization wave. The obtained results show an increase of the axial electric field in the jet effluent in the gas phase with a peak magnitude from 12 to 18 kVcm -1 before the ionization wave impinges on the substrate. A steep electric field enhancement to a peak value of about 24 kVcm -1 was observed when the ionization wave impinges on the surface. A peak radial electric field of about 27 kVcm -1 was measured off-axis in the surface ionization wave. These results are consistent with previously reported modelling predictions. While Stark polarization spectroscopy is limited to electric field measurement from regions with emission, we illustrate that the capability to measure near surface electric fields in helium makes it a valuable complementary technique for the electric field-induced second harmonic (E-FISH) technique.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2022

Performance Evaluations of Noisy Approximate Quantum Fourier Arithmetic

The Quantum Fourier Transform (QFT) grants competitive advantages, especially in resource usage and circuit approximation, for performing arithmetic operations on quantum computers, and offers a potential route towards a numerical quantum-computational paradigm. In this paper, we utilize efficient techniques to implement QFT-based integer addition and multiplications. These operations are fundamental to various quantum applications including Shor’s algorithm, weighted sum optimization problems in data processing and machine learning and quantum algorithms requiring inner products. We carry out performance evaluations of these implementations based on IBM’s superconducting qubit architecture using different compatible noise models. We isolate the sensitivity of the component quantum circuits on both one-/two-qubit gate error rates, and the number of the arithmetic operands’ superposed integer states. We analyze performance, and identify the most effective approximation depths for quantum add and quantum multiply within the given context. We observe significant dependency of the optimal approximation depth on the degree of machine noise and the number of superposed states in certain performance regimes. Finally, we elaborate on the algorithmic challenges - relevant to signed, unsigned, modular and non-modular versions - that could also be applied to current implementations of QFT-based subtraction, division, exponentiation, and their potential tensor extensions. Here, we analyze performance trends in our results and speculate on possible future development within this computational paradigm.

97 MATHEMATICS AND COMPUTING↗
NASA NTRS2019

Trend Quality Ozone from NPP OMPS: The Version 2 Processing

A version 2 processing of data from two ozone monitoring instruments on Suomi NPP, the OMPS nadir ozone mapper and the OMPS nadir ozone profiler, has now been completed. The previously released data were useful for many purposes but were not suitable for use in ozone trend analysis. In this processing, instrument artifacts have been identified and corrected, an improved scattered light correction and wavelength registration have been applied, and soft calibration techniques were implemented to produce a calibration consistent with data from the series of SBUV/2 instruments. The result is a high-quality ozone time series suitable for trend analysis. Total column ozone data from the OMPS nadir mapper now agree with data from the SBUV/2 instrument on NOAA 19 with a zonal average bias of −0.2 % over the 60° S to 60° N latitude zone. Differences are somewhat larger between OMPS nadir profiler and N19 total column ozone, with an average difference of −1.1 % over the 60° S to 60° N latitude zone and a residual seasonal variation of about 2 % at latitudes higher than about 50°. For the profile retrieval, zonal average ozone in the upper stratosphere (between 2.5 and 4 hPa) agrees with that from NOAA 19 within ±3 % and an average bias of −1.1 %. In the lower stratosphere (between 25 and 40 hPa) agreement is within ±3 % with an average bias of +1.1 %. Tropospheric ozone produced by subtracting stratospheric ozone measured by the OMPS limb profiler from total column ozone measured by the nadir mapper is consistent with tropospheric ozone produced by subtracting stratospheric ozone from MLS from total ozone from the OMI instrument on Aura. The agreement of tropospheric ozone is within 10 % in most locations.

OMPS nadir ozone mapper↗
DOE OSTI2026

Comparison of automated chemical-guided segmentation and human annotation of soil organic matter in X-ray microcomputed tomography imaging in contrasted soil types

Soil organic matter (OM) formation and persistence is strongly influenced by the spatial distribution of organic substrates and microscale soil heterogeneity by dictating OM accessibility to microorganisms. However, traditional size and/or density fractionation techniques disrupt aggregate architecture, eliminating spatial information needed to fully understand intra-aggregate OM distribution. To quantify three-dimensional OM spatial distribution and automate segmentation in X-ray microcomputed tomography (µCT) imaging without human annotation bias, we developed an iodine gas vapor (I2) based staining workflow that eliminates labor-intensive manual annotation while maintaining segmentation accuracy, using aggregates from four taxonomically diverse soils (Xerofluvent, Haploxeroll Sphagnofibrist, Palehumult) with an 8-fold range of soil organic carbon. Human annotation of 10 µCT slices by the experienced and inexperienced annotators resulted in variations up to 3% in the Dice similarity coefficient (DSC), reflecting a degree of inherent subjectivity of manual labeling. Such inconsistencies are expected to compound as the number of manually annotated slices increases. Dual-energy µCT imaging at 33.1 keV (below the iodine (I) K-edge) and 33.2 keV (above the I K-edge) was used to resolve aggregate microstructure following I2 staining. The automated image subtraction pipeline identified OM regions by the I Kedge induced brightness increases, achieving DSC values of 0.58–0.83 relative to an experienced annotator. Sensitivity analyses revealed that the reconstruction alpha value—optimized via the open-source tool TomocuPy—and the 3D registration slice count were the primary determinants of accuracy, providing a novel benchmark for dual-energy soil imaging. The pipeline without GPU acceleration achieved 9.6 to 43.2 times faster than manual annotation. Using GPU-accelerated image post-processing and affine transformation matrices, the pipeline successfully segmented OM elements for large-scale datasets (3232×3232 pixel, 2048 slices) within ~5200 s from raw file acquisition to segmented output. The high-throughput approach enables the quantification of OM spatial distribution across diverse and heterogeneous soil.

Soil microbial biomass↗
DOE OSTI2024

Adaptable SEC‐SAXS data collection for higher quality structure analysis in solution

Abstract The two major challenges in synchrotron size‐exclusion chromatography coupled in‐line with small‐angle x‐ray scattering (SEC‐SAXS) experiments are the overlapping peaks in the elution profile and the fouling of radiation‐damaged materials on the walls of the sample cell. In recent years, many post‐experimental analyses techniques have been developed and applied to extract scattering profiles from these problematic SEC‐SAXS data. Here, we present three modes of data collection at the BioSAXS Beamline 4–2 of the Stanford Synchrotron Radiation Lightsource (SSRL BL4‐2). The first mode, the High‐Resolution mode, enables SEC‐SAXS data collection with excellent sample separation and virtually no additional peak broadening from the UHPLC UV detector to the x‐ray position by taking advantage of the low system dispersion of the UHPLC. The small bed volume of the analytical SEC column minimizes sample dilution in the column and facilitates data collection at higher sample concentrations with excellent sample economy equal to or even less than that of the conventional equilibrium SAXS method. Radiation damage problems during SEC‐SAXS data collection are evaded by additional cleaning of the sample cell after buffer data collection and avoidance of unnecessary exposures through the use of the x‐ray shutter control options, allowing sample data collection with a clean sample cell. Therefore, accurate background subtraction can be performed at a level equivalent to the conventional equilibrium SAXS method without requiring baseline correction, thereby leading to more reliable downstream structural analysis and quicker access to new science. The two other data collection modes, the High‐Throughput mode and the Co‐Flow mode, add agility to the planning and execution of experiments to efficiently achieve the user's scientific objectives at the SSRL BL4‐2.

Matsui, Tsutomu↗