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At least 325 records · Page 18

If We Build Them, They Will Run: Automated HPC Apps Deployment and Profiling with eBPF in Cloud

The high performance computing (HPC) community is in a period of transition. The rise of AI/ML coupled with a changing landscape of resources deems portability a new metric of performance, and methods to move between on-premises and cloud environments and assess compatibility are paramount. Here we design and test a strategy for bridging the gap between traditional HPC and Kubernetes environments – first containerizing applications, providing automated orchestration to run studies, and packaging the setup with automated means to assess performance using low overhead eXtended Berkeley Packet Filter (eBPF) programs. We first assess different designs for eBPF collection, demonstrating a tradeoff between number of programs deployed on a node and overhead added. We develop 5 low overhead eBPF programs that combine with streaming ML models to assess CPU, futex, TCP, shared memory, and file access across four different builds of an HPC application for CPU and GPU. We use eBPF data to generate insights into the possible underlying etiology of scaling issues. We then assess compatibility of a well-known benchmark, HPCG, across matrices of micro-architectures and optimization levels (217 containers across 24 instance types and over 7500 runs). We provide to the community 30 applications to deploy in our automated setup and perform a scaling study from 4 to a maximum of 256 nodes for both CPU and GPU applications. Finally, we use our gained knowledge about performance to generate compatibility artifacts that are used by a newly developed Kubernetes controller to intelligently select instance type based on optimizing a figure of merit. Along with insights to scaling in this environment with a collection of applications and templates to work from, we provide an overall strategy for approaching HPC application deployment and image selection based on compatibility in cloud.

Computer science↗

Progress Towards a Common CERES Cloud Mask Algorithm for MODIS and VIIRS: Evaluation using CALIOP Data

For over two decades The Clouds and the Earth’s Radiant Energy System (CERES) project has endeavored to produce a long-term global climate data record for detecting changes in the Earth’s radiation budget and to improve understanding of how clouds contribute to those changes. CERES incorporates cloud information derived from passive narrowband satellite imaging radiometers, and over the course of the project different instruments have contributed to this effort, namely the Moderate Resolution Imaging Spectroradiometer (MODIS) and the Visible Infrared Imaging Radiometer Suite (VIIRS).Cloud properties have been derived from MODIS on the Aqua satellite for CERES since 2002,and VIIRS on the NOAA-20 satellite launched in 2017 will continue the cloud record once Aqua-MODIS reaches the end of its operational lifetime. However, MODIS and VIIRS have different spectral capabilities and characteristics which complicates our ability to seamlessly transition the record from MODIS to VIIRS. This study evaluates some of the recent algorithm modifications incorporated by the CERES Cloud Working Group towards developing a unified cloud mask algorithm for MODIS and VIIRS that utilizes a set of spectral bands common to both instruments. Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP) data products are used to evaluate MODIS and VIIRS regional cloud fraction estimates and identify areas where improvements can be made. The cloud mask algorithm relies on computed estimates of cloud-free top-of-atmosphere radiances to differentiate cloudy and cloud-free imager pixels. The unified cloud mask algorithm currently under development uses a reduced number of spectral bands common to both MODIS and VIIRS and so relies on the accuracy of these simulated cloud-free radiances more heavily than predecessor algorithms, i.e., the CERES Edition 4 cloud mask, which use as much spectral information as available on each imager with less consideration for cross-platform consistency. Our validation strategy using CALIOP data is also described. The CALIOP observations are critical for assessing cloud detection accuracies and for independently confirming cloud-free conditions which enables a more robust evaluation of the simulated cloud-free radiances for biases due to factors such as view angle and the spectral dependence of water vapor absorption. These effects are known to differ for the two satellite instruments. Comparisons of MODIS and VIIRS cloud fractions are presented in context with estimates from CALIOP and from the CERES Edition 4 cloud mask algorithm to gauge current progress in developing accurate and consistent MODIS and VIIRS cloud properties for CERES.

CERES↗

Global, Multi-Year Analysis of Clouds and Earth's Radiant Energy System Terra Observations and Radiative Transfer Calculations

An extended record of the Terra Surface and Atmosphere Radiation Budget (SARB) computed by CERES (Clouds and Earth s Radiant Energy System) is produced in gridded form, facilitating an investigation of global scale direct aerosol forcing. The new gridded version (dubbed FSW) has a spacing of 1 at the Equator. A companion document (Rutan et al. 2005) focuses on advances to (and validation of) the ungridded, footprint scale calculations (dubbed CRS), primarily in clear-sky conditions. While mainly intended to provide observations of fluxes at the top of atmosphere (TOA), CERES (Wielicki et al. 1996) includes a program to also compute the fluxes at TOA, within the atmosphere and at the surface, and also to validate the results with independent ground based measurements (Charlock and Alberta 1996). ARM surface data has been a focus for this component of CERES. To permit the user to infer cloud forcing and direct aerosol forcing with the computed SARB, CERES includes surface and TOA fluxes that have been computed for cloud-free (clear) and aerosol free (pristine) footprints; this accounts for aerosol effects (SW scattering and absorption, and LW scattering, absorption and emission) to both clear and cloudy skies.

Charlock, T. P.↗

Estimating integrated cloud liquid water from extended time observations of solar irradiance

An analysis technique used to estimate the integrated liquid water content (LWC) from the measured solar irradiance is described. The cloud transmittance is computed by dividing the irradiance measured at some time by a clear sky value obtained at the same time on a cloudless day. From the transmittance and the zenith angle, the cloud LWC is computed using the radiative transfer parameterizations of Stephens et al., (1984). The results are compared with 17 days of mm-wave (20.6 and 31.65 GHz) radiometer measurements made during the First ISCCP Regional Experiment (FIRE) Intensive Field Observation (IFO) in July of 1987.

Fairall, C. W.↗

An eight-month climatology of marine stratocumulus cloud fraction, albedo, and integrated liquid water

As part of the FIRE/Extended Time Observations (ETO) program, extended time observations were made at San Nicolas Island (SNI) from March to October, 1987. Hourly averages of air temperature, relative humidity, wind speed and direction, solar irradiance, and downward longwave irradiance were recorded. The radiation sensors were standard Eppley pyranometers (shortwave) and pyrgeometers (longwave). The SNI data were processed in several ways to deduce properties of the stratocumulus covered marine boundary layer (MBL). For example, from the temperature and humidity the lifting condensation level, which is an estimate of the height of the cloud bottom, can be computed. A combination of longwave irradiance statistics can be used to estimate fractional cloud cover. An analysis technique used to estimate the integrated cloud liquid water content (W) and the cloud albedo from the measured solar irradiance is also described. In this approach, the cloud transmittance is computed by dividing the irradiance measured at some time by a clear sky value obtained at the same hour on a cloudless day. From the transmittance and the zenith angle, values of cloud albedo and W are computed using the radiative transfer parameterizations of Stephens (1978). These analysis algorithms were evaluated with 17 days of simultaneous and colocated mm-wave (20.6 and 31.65 GHz) radiometer measurements of W and lidar ceilometer measurements of cloud fraction and cloudbase height made during the FIRE IFO. The algorithms are then applied to the entire data set to produce a climatology of these cloud properties for the eight month period.

Fairall, C. W.↗

Parameterizing Grid-Averaged Longwave Fluxes for Inhomogeneous Marine Boundary Layer Clouds

This paper examines the relative impacts on grid-averaged longwave flux transmittance (emittance) for Marine Boundary Layer (MBL) cloud fields arising from horizontal variability of optical depth tau and cloud sides, First, using fields of Landsat-inferred tau and a Monte Carlo photon transport algorithm, it is demonstrated that mean all-sky transmittances for 3D variable MBL clouds can be computed accurately by the conventional method of linearly weighting clear and cloudy transmittances by their respective sky fractions. Then, the approximations of decoupling cloud and radiative properties and assuming independent columns are shown to be adequate for computation of mean flux transmittance. Since real clouds have nonzero geometric thicknesses, cloud fractions A'(sub c) presented to isotropic beams usually exceed the more familiar vertically projected cloud fractions A(sub c). It is shown, however, that when A(sub c)less than or equal to 0.9, biases for all-sky transmittance stemming from use of A(sub c) as opposed to A'(sub c) are roughly 2-5 times smaller than, and opposite in sign to, biases due to neglect of horizontal variability of tau. By neglecting variable tau, all-sky transmittances are underestimated often by more than 0.1 for A(sub c) near 0.75 and this translates into relative errors that can exceed 40% (corresponding errors for all-sky emittance are about 20% for most values of A(sub c). Thus, priority should be given to development of General Circulation Model (GCM) parameterizations that account for the effects of horizontal variations in unresolved tau, effects of cloud sides are of secondary importance. On this note, an efficient stochastic model for computing grid-averaged cloudy-sky flux transmittances is furnished that assumes that distributions of tau, for regions comparable in size to GCM grid cells, can be described adequately by gamma distribution functions. While the plane-parallel, homogeneous model underestimates cloud transmittance by about an order of magnitude when 3D variable cloud transmittances are less than or equal to 0.2 and by approx. 20% to 100% otherwise, the stochastic model reduces these biases often by more than 80%.

Barker, Howard W.↗

IN13B-1660: Analytics and Visualization Pipelines for Big Data on the NASA Earth Exchange (NEX) and OpenNEX

We are developing capabilities for an integrated petabyte-scale Earth science collaborative analysis and visualization environment. The ultimate goal is to deploy this environment within the NASA Earth Exchange (NEX) and OpenNEX in order to enhance existing science data production pipelines in both high-performance computing (HPC) and cloud environments. Bridging of HPC and cloud is a fairly new concept under active research and this system significantly enhances the ability of the scientific community to accelerate analysis and visualization of Earth science data from NASA missions, model outputs and other sources. We have developed a web-based system that seamlessly interfaces with both high-performance computing (HPC) and cloud environments, providing tools that enable science teams to develop and deploy large-scale analysis, visualization and QA pipelines of both the production process and the data products, and enable sharing results with the community. Our project is developed in several stages each addressing separate challenge - workflow integration, parallel execution in either cloud or HPC environments and big-data analytics or visualization. This work benefits a number of existing and upcoming projects supported by NEX, such as the Web Enabled Landsat Data (WELD), where we are developing a new QA pipeline for the 25PB system.

visualization↗

Prognostics As-A-Service: A Scalable Cloud Architecture for Prognostics

Comprehensive aircraft system health-state awareness is critical for maintaining safe, efficient growth in global operations, enabling higher levels of autonomy, and facilitating new forms of aviation. Maintainers, vehicle operators, air traffic controllers, dispatchers, pilots, autonomous systems, and other decision-makers must have reliable real-time knowledge of the vehicle health, the health of its critical composite systems, predictions of how health changes with time, and forecasts of how its capabilities change with health degradation to preserve safety and efficiency. Providing this information in a reliable manner in computationally constrained environments and across a wide range of vehicles and systems continues to be a challenge. This challenge can be partially resolved through cloud computing, where the execution of prognostic and diagnostic algorithms is performed on a network of remote servers hosted on the internet. NASA is developing a cloud computing service, Prognostics As-A-Service (PaaS), that explores the feasibility and challenges of cloud-enhanced prognostics. Though such a system has broad applicability, this research effort is focused on aviation applications.

Prognostics↗

Collapse and equilibrium of rotating, adiabatic clouds

A numerical hydrodynamics computer code analysis of the collapse and establishment of equilibrium of adiabatic gas clouds restricted to axial symmetry found that the clouds are originally uniform in density and rotation. The method can compare the dynamic collapse and approach to equilibrium with the data on incompressible uniformly rotating equilibrium clouds and on equilibrium structures of differentially rotating polytropes. It is concluded that the stellar formation theory indicates that the low alpha fragments produced at the termination of the dynamic isothermal collapse phase of interstellar clouds may undergo significant dynamic collapse in an adiabatic regime leading to transitory ring formation and additional fragmentation on a smaller scale.

Boss, A. P.↗

The three-dimensional structure of cumulus clouds over the ocean. 1: Structural analysis

Thermal channel (channel 6, 10.4-12.5 micrometers) images of five Landsat thematic mapper cumulus scenes over the ocean are examined. These images are thresholded using the standard International Satellite Cloud Climatology Project (ISCCP) thermal threshold algorithm. The individual clouds in the cloud fields are segmented to obtain their structural statistics which include size distribution, orientation angle, horizontal aspect ratio, and perimeter-to-area (PtA) relationship. The cloud size distributions exhibit a double power law with the smaller clouds having a smaller absolute exponent. The cloud orientation angles, horizontal aspect ratios, and PtA exponents are found in good agreement with earlier studies. A technique also is developed to recognize individual cells within a cloud so that statistics of cloud cellular structure can be obtained. Cell structural statistics are computed for each cloud. Unicellular clouds are generally smaller (less than or equal to 1 km) and have smaller PtA exponents, while multicellular clouds are larger (greater than or equal to 1 km) and have larger PtA exponents. Cell structural statistics are similar to those of the smaller clouds. When each cell is approximated as a quadric surface using a linear least squares fit, most cells have the shape of a hyperboloid of one sheet, but about 15% of the cells are best modeled by a hyperboloid of two sheets. Less than 1% of the clouds are ellipsoidal. The number of cells in a cloud increases slightly faster than linearly with increasing cloud size. The mean nearest neighbor distance between cells in a cloud, however, appears to increase linearly with increasing cloud size and to reach a maximum when the cloud effective diameter is about 10 km; then it decreases with increasing cloud size. Sensitivity studies of threshold and lapse rate show that neither has a significant impact upon the results. A goodness-of-fit ratio is used to provide a quantitative measure of the individual cloud results. Significantly improved results are obtained after applying a smoothing operator, suggesting the eliminating subresolution scale variations with higher spatial resolution may yield even better shape analyses.

Kuo, Kwo-Sen↗

Infrared radiative transfer through a regular array of cuboidal clouds

Infrared radiative transfer through a regular array of cuboidal clouds is studied and the interaction of the sides of the clouds with each other and the ground is considered. The theory is developed for black clouds and is extended to scattering clouds using a variable azimuth two-stream approximation. It is shown that geometrical considerations often dominate over the microphysical aspects of radiative transfer through the clouds. For example, the difference in simulated 10 micron brightness temperature between black isothermal cubic clouds and cubic clouds of optical depth 10, is less than 2 deg for zenith angles less than 50 deg for all cloud fractions when viewed parallel to the array. The results show that serious errors are made in flux and cooling rate computations if broken clouds are modeled as planiform. Radiances computed by the usual practice of area-weighting cloudy and clear sky radiances are in error by 2 to 8 K in brightness temperature for cubic clouds over a wide range of cloud fractions and zenith angles. It is also shown that the lapse rate does not markedly affect the exiting radiances for cuboidal clouds of unit aspect ratio and optical depth 10.

HARSHVARDHAN↗

Application of an automatic cloud tracking technique to Meteosat water vapor and infrared observations

The automatic cloud tracking system was applied to METEOSAT 6.7 micrometers water vapor measurements to learn whether the system can track the motions of water vapor patterns. Data for the midlatitudes, subtropics, and tropics were selected from a sequence of METEOSAT pictures for 25 April 1978. Trackable features in the water vapor patterns were identified using a clustering technique and the features were tracked by two different methods. In flat (low contrast) water vapor fields, the automatic motion computations were not reliable, but in areas where the water vapor fields contained small scale structure (such as in the vicinity of active weather phenomena) the computations were successful. Cloud motions were computed using METEOSAT infrared observations (including tropical convective systems and midlatitude jet stream cirrus).

Endlich, R. M.↗

Using Multi-Scale Modeling Systems and Satellite Data to Study the Precipitation Processes

In recent years, exponentially increasing computer power extended Cloud Resolving Model (CRM) integrations from hours to months, the number of computational grid points from less than a thousand to close to ten million. Three-dimensional models are now more prevalent. Much attention is devoted to precipitating cloud systems where the crucial 1-km scales are resolved in horizontal domains as large as 10,000 km in two-dimensions, and 1,000 x 1,000 sq km in three-dimensions. Cloud resolving models now provide statistical information useful for developing more realistic physically based parameterizations for climate models and numerical weather prediction models. It is also expected that NWP and mesoscale models can be run in grid size similar to cloud resolving models through nesting technique. Recently, a multi-scale modeling system with unified physics was developed at NASA Goddard. It consists of (1) a cloud-resolving model (Goddard Cumulus Ensemble model, GCE model). (2) a regional scale model (a NASA unified weather research and forecast, W8F). (3) a coupled CRM and global model (Goddard Multi-scale Modeling Framework, MMF), and (4) a land modeling system. The same microphysical processes, long and short wave radiative transfer and land processes and the explicit cloud-radiation and cloud-land surface interactive processes are applied in this multi-scale modeling system. This modeling system has been coupled with a multi-satellite simulator to use NASA high-resolution satellite data to identify the strengths and weaknesses of cloud and precipitation processes simulated by the model. In this talk, a review of developments and applications of the multi-scale modeling system will be presented. In particular, the results from using multi-scale modeling systems to study the interactions between clouds, precipitation, and aerosols will be presented. Also how to use the multi-satellite simulator to improve precipitation processes will be discussed.

Tao, Wei--Kuo↗

Diagnosing convective instability using VAS data

The utility of combining visible and various infrared images from the VAS to produce a forecasting tool, that can be available on a near real time basis, to predict severe weather development is shown. Areas where dry air in the midtroposphere overlays substantial moisture at low levels are used to diagnose mesoscale regions that have the potential for being convectively unstable before the onset of severe convection. Specifically, 6.7 micron water vapor imagery, used for isolating regions of substantial midlevel dryness, are combined with images of low level clouds or with split-window low level moisture images to delineate regions that have the potential for convective instability. In areas where scattered low level clouds are present, computer generated, color image combinations are used to isolate those warm, low level clouds that are in potential convectively unstable environments from clouds that exist under a deeply moist atmosphere. In clear regions, the split window technique is used for delineating areas of substantial boundary layer moisture. These images are again computer overlayed by the midlevel dryness to produce a color coded image of potential convective instability.

Petersen, R. A.↗

Computation of the Effects of Inhomogeneous Clouds on Retrieval of Remotely Sensed Properties

Current and future earth observation programs depend on satellite measurements of radiance to retrieve the properties of clouds on a global basis. At present, this retrieval is made assuming that the clouds in the instrument field of view are plane parallel and independent of adjacent pixels. While this assumption is known to be false except in very limited cases, its impact can be evaluated, and if possible corrected, based on emerging theoretical techniques. In this study, the Spherical Harmonic Discrete Ordinate Method (SHDOM, Evans, 1996) has been used to assess the sensitivity of the retrieval to a variety of cloud parameters. SHDOM allows the plane parallel assumption to be relaxed and makes 2D and even 3D radiative solutions practical. A previous study (Chambers et al., 1996) assessed the effect of horizontal inhomogeneity in 45 LANDSAT scenes of boundary layer clouds over ocean. The four scenes studied here represent overcast, broken, scattered and strongly thermally forced cloud fields and are used to perform sensitivity studies to a wider variety of parameters. Comparisons are made at three solar zenith angles (theta (sub 0) = 0, 49, and 63 degrees) to avoid ambiguity in the results due to solar zenith angle.

Chambers, Lin H.↗

Implementation of a Message Passing Interface into a Cloud-Resolving Model for Massively Parallel Computing

The capability for massively parallel programming (MPP) using a message passing interface (MPI) has been implemented into a three-dimensional version of the Goddard Cumulus Ensemble (GCE) model. The design for the MPP with MPI uses the concept of maintaining similar code structure between the whole domain as well as the portions after decomposition. Hence the model follows the same integration for single and multiple tasks (CPUs). Also, it provides for minimal changes to the original code, so it is easily modified and/or managed by the model developers and users who have little knowledge of MPP. The entire model domain could be sliced into one- or two-dimensional decomposition with a halo regime, which is overlaid on partial domains. The halo regime requires that no data be fetched across tasks during the computational stage, but it must be updated before the next computational stage through data exchange via MPI. For reproducible purposes, transposing data among tasks is required for spectral transform (Fast Fourier Transform, FFT), which is used in the anelastic version of the model for solving the pressure equation. The performance of the MPI-implemented codes (i.e., the compressible and anelastic versions) was tested on three different computing platforms. The major results are: 1) both versions have speedups of about 99% up to 256 tasks but not for 512 tasks; 2) the anelastic version has better speedup and efficiency because it requires more computations than that of the compressible version; 3) equal or approximately-equal numbers of slices between the x- and y- directions provide the fastest integration due to fewer data exchanges; and 4) one-dimensional slices in the x-direction result in the slowest integration due to the need for more memory relocation for computation.

Juang, Hann-Ming Henry↗

Solar Radiation Transport in the Cloudy Atmosphere: A 3D Perspective on Observations and Climate Impacts

The interplay of sunlight with clouds is a ubiquitous and often pleasant visual experience, but it conjures up major challenges for weather, climate, environmental science and beyond. Those engaged in the characterization of clouds (and the clear air nearby) by remote sensing methods are even more confronted. The problem comes, on the one hand, from the spatial complexity of real clouds and, on the other hand, from the dominance of multiple scattering in the radiation transport. The former ingredient contrasts sharply with the still popular representation of clouds as homogeneous plane-parallel slabs for the purposes of radiative transfer computations. In typical cloud scenes the opposite asymptotic transport regimes of diffusion and ballistic propagation coexist. We survey the three-dimensional (3D) atmospheric radiative transfer literature over the past 50 years and identify three concurrent and intertwining thrusts: first, how to assess the damage (bias) caused by 3D effects in the operational 1D radiative transfer models? Second, how to mitigate this damage? Finally, can we exploit 3D radiative transfer phenomena to innovate observation methods and technologies? We quickly realize that the smallest scale resolved computationally or observationally may be artificial but is nonetheless a key quantity that separates the 3D radiative transfer solutions into two broad and complementary classes: stochastic and deterministic. Both approaches draw on classic and contemporary statistical, mathematical and computational physics.

Davis, Anthony B.↗

Characteristics of middle and upper tropospheric clouds as deduced from rawinsonde data

The static environment of middle and upper tropospheric clouds is characterized. Computed relative humidity with respect to ice is used to diagnose the presence of cloud layer. The deduced seasonal mean cloud cover estimates based on this technique are shown to be reasonable. The cases are stratified by season and pressure thickness, and the dry static stability, vertical wind speed shear, and Richardson number are computed for three layers for each case. Mean values for each parameter are presented for each stratification and layer. The relative frequency of occurrence of various structures is presented for each stratification. The observed values of each parameter and the observed structure of each parameter are quite variable. Structures corresponding to any of a number of different conceptual models may be found. Moist adiabatic conditions are not commonly observed and the stratification based on thickness yields substantially different results for each group.

Starr, D. D. O.↗