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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 325 records · Page 18

Room-temperature X-ray crystallography reveals the oxidation and reactivity of cysteine residues in SARS-CoV-2 3CL Mpro: insights into enzyme mechanism and drug design

The emergence of the novel coronavirus SARS-CoV-2 has resulted in a worldwide pandemic not seen in generations. Creating treatments and vaccines to battle COVID-19, the disease caused by the virus, is of paramount importance in order to stop its spread and save lives. The viral main protease, 3CL M pro , is indispensable for the replication of SARS-CoV-2 and is therefore an important target for the design of specific protease inhibitors. Detailed knowledge of the structure and function of 3CL M pro is crucial to guide structure-aided and computational drug-design efforts. Here, the oxidation and reactivity of the cysteine residues of the protease are reported using room-temperature X-ray crystallography, revealing that the catalytic Cys145 can be trapped in the peroxysulfenic acid oxidation state at physiological pH, while the other surface cysteines remain reduced. Only Cys145 and Cys156 react with the alkylating agent N -ethylmaleimide. It is suggested that the zwitterionic Cys145–His45 catalytic dyad is the reactive species that initiates catalysis, rather than Cys145-to-His41 proton transfer via the general acid–base mechanism upon substrate binding. The structures also provide insight into the design of improved 3CL M pro inhibitors.

3CL Mpro↗

Deep residual networks for crystallography trained on synthetic data

The use of artificial intelligence to process diffraction images is challenged by the need to assemble large and precisely designed training data sets. To address this, a codebase called Resonet was developed for synthesizing diffraction data and training residual neural networks on these data. Here, two per-pattern capabilities of Resonet are demonstrated: (i) interpretation of crystal resolution and (ii) identification of overlapping lattices. Resonet was tested across a compilation of diffraction images from synchrotron experiments and X-ray free-electron laser experiments. Crucially, these models readily execute on graphics processing units and can thus significantly outperform conventional algorithms. While Resonet is currently utilized to provide real-time feedback for macromolecular crystallography users at the Stanford Synchrotron Radiation Lightsource, its simple Python-based interface makes it easy to embed in other processing frameworks. This work highlights the utility of physics-based simulation for training deep neural networks and lays the groundwork for the development of additional models to enhance diffraction collection and analysis.

36 MATERIALS SCIENCE↗

Model Residuals as Shields: A Two-Level Formulation to Defend Smart Grids From Poisoning Attacks

The advancement of smart grids presents both vast opportunities and heightened cybersecurity risks. Data-driven defense mechanisms, though designed as a shield against these threats, can fall prey to poisoning attacks. We delve into regression settings, underscoring the imperative to fortify defenses against a spectrum of poison ratios, notably those above 0.5—an issue scarcely addressed in prior studies. Recognizing the susceptibilities of smart grids and their manipulable sensors, we exploit the very intent of poisoning attacks, compromising model accuracy, as our defense mechanism. Our proposed two-level optimization framework discerns between poisoned and authentic data based on model residuals, outperforming or matching existing methods in 72% to 77% of precision and 75% to 80% of recalls across various poisoning attacks, poison ratios, and datasets. Once the authentic data are identified, the trained model is adaptable for a variety of applications. Comprehensive evaluations on different smart grid datasets, pitted against myriad poisoning schemes, validate our methodology’s edge over existing methods. Here, we also shed light on the implications of model misspecification originating from temporal auto-correlation, a common feature in Internet of Things and smart grid data.

Adversarial machine learning (ML)↗

ResSR: A Computationally Efficient Residual Approach to Super-Resolving Multispectral Images

Multispectral imaging (MSI) plays a critical role in material classification, environmental monitoring, and remote sensing. However, MSI sensors typically have wavelength-dependent resolution, which limits downstream analysis. MSI super-resolution (MSI-SR) methods address this limitation by reconstructing all bands at a common high spatial resolution. Existing methods can achieve high reconstruction quality but often rely on spatially-coupled optimization or large learning-based models, leading to significant computational cost and limiting their use in large-scale or time-critical settings. In this paper, we introduce ResSR, a computationally efficient, model-based MSI-SR method that achieves high-quality reconstruction without supervised training or spatially-coupled optimization. Notably, ResSR decouples spectral and spatial processing into two sequential steps. ResSR first computes a spectrally-informed high-resolution estimate of the MSI using singular value decomposition together with a spatially-decoupled approximate forward model. It then applies a residual correction step to restore low-frequency spatial consistency while preserving high-frequency detail recovered by the spectral reconstruction. ResSR achieves comparable or improved reconstruction quality relative to existing MSI-SR methods while being

Sullivan, Haley [ORNL] (ORCID:0000000274069217)↗

Design Considerations to Ensure Robustness of the ITER Diagnostics Residual Gas Analyzer

Increasing robustness of the ITER diagnostic residual gas analyzer (DRGA) is critical for the potential control of plasma heating and fuel-cycle processing. Robustness is a requirement for a diagnostic to have a control function. The DRGA is a multisensor diagnostic system capable of resolving isotopic compositions of hydrogen and helium as well as other heavier elements and compounds. The divertor-specific DRGA system is intended to measure the composition of gases in the ITER subdivertor region and midplane. Its analysis station will be located in a port cell at the divertor level. From there, it will sample a slip stream of gas from the cryogenic pump duct. It will then exhaust into a shared roughing line where helium or other light gas impurities, some potentially from other diagnostic systems, are likely to be present. In order to provide reliable measurements, the DRGA must be robust in areas such as plasma optical emission source geometry for a compact design, mitigation of back-streaming from light gases and resilience to the ITER port cell environment, and radiation hardening of the DRGA electronics. By incorporating robustness into the design, areas of plasma heating and fuel-cycle control may be explored with the DRGA for ITER and next-generation fusion devices.

Quinlan, Brendan↗

A Data-Driven Methodology for Contextual Unit Commitment Using Regression Residuals

Day after day, system operators are faced with the challenge of taking unit commitment (UC) decisions under uncertain net load conditions. The standard operating procedure for taking UC decisions begins by leveraging auxiliary data on covariates (such as the day of the week or latest weather information) to generate a point prediction for net load, which is used in solving a deterministic UC problem. Such an approach, however, is known to deliver a notoriously poor out-of-sample (OOS) performance, as it completely disregards the stochastic nature of net load. While stochastic programming models explicitly represent uncertainty, they mostly do so using a generic set of scenarios that neglect covariate observations, squandering useful auxiliary data that could be harnessed to glean insights into uncertainty. In this article, we discuss a contextual stochastic optimization approach to UC, which effectively exploits covariate observations while explicitly assessing uncertainty so as to boost the OOS performance of UC decisions. The key thrust of our approach is to leverage regression models, along with their empirical residuals, to set up and solve sample average approximation problems. Not only do we prove that our approach satisfies the requisite conditions for asymptotic optimality and consistency laid out in (Kannan et al., 2022), but we also assess its performance on several case studies conducted using real-world data collected in California ISO and New York ISO grids. In conclusion, results show that the proposed approach can significantly improve OOS performance compared to alternative methods proposed in the literature under varying dataset sizes.

Yurdakul, Ogun↗

Nepheline crystallization and the residual glass composition: Understanding waste glass durability

The vast majority of High-Level Waste (HLW) originating from defense nuclear programs is sequestered and immobilized in borosilicate glass. Borosilicate glass is universally accepted for immobilizing HLW, but its efficiency has limitations based on the compositional makeup of the waste stream. The chemical durability of the glass is the most important factor in determining the longevity and usefulness of the final glass waste form. The primary detriment to this durability in glasses containing high levels of aluminum is nepheline (NaAlSiO 4 ) crystallization, as it is generally accompanied by a measurable decrease in the glass's chemical durability. This work seeks to understand nepheline crystallization, within the context of thermal history, and to elucidate the influence of compositional shifts in the residual glass (after crystallization) on the measured durability. The results presented within show a distinct deviation in leaching behavior as a function of structural makeup (calculated Q units). This understanding will provide practical information required for broadening glass compositional regions needed to more efficiently vitrify HLW.

36 MATERIALS SCIENCE↗

A Generalized Stress Inversion Approach With Application to Residual Stress Estimation

In this work develop a generalized stress inversion technique (or the generalized inversion method) capable of recovering stresses in linear elastic bodies subjected to arbitrary cuts. Specifically, given a set of displacement measurements found experimentally from digital image correlation (DIC), we formulate a stress estimation inverse problem as a partial differential equation-constrained optimization problem. We use gradient-based optimization methods, and we accordingly derive the necessary gradient and Hessian information in a matrix-free form to allow for parallel, large-scale operations. By using a combination of finite elements, DIC, and a matrix-free optimization framework, the generalized inversion method can be used on any arbitrary geometry, provided that the DIC camera can view a sufficient part of the surface. We present numerical simulations and experiments, and we demonstrate that the generalized inversion method can be applied to estimate residual stress.

42 ENGINEERING↗

Iterative Stress Reconstruction Algorithm to Estimate Three-Dimensional Residual Stress Fields in Manufactured Components

Residual stress (RS) significantly impacts the mechanical performance of components. Measurement of RS often provides incomplete data in terms of components of stress and spatial density. Employing such fields in finite element simulations results in significant modification of the field to achieve equilibrium and compatibility among strains. To overcome this, an iterative stress reconstruction algorithm (ISRA) is developed to estimate 3D RS fields that satisfy equilibrium, are stress component-wise complete, and represent the characterized data sampled. An Al 7075-T651 plate and an additively manufactured (AM) A36 steel wall are considered for RS reconstruction using measurement data from the literature. A maximum variation of ~2.5 MPa in the Al plate, and ~10 MPa in the steel wall are observed between the reconstructed and measured stresses. Furthermore, unknown stress components emerge and reach significant magnitudes (upto ~2.3 MPa in the Al plate and ~45 MPa in the AM wall) during ISRA. Indeed, it is found that minor errors in measurement or data processing are eliminated through the physical requirements during ISRA. Employing a reconstructed RS field is hence not just more accurate given its compatibility, but it additionally corrects for minor errors in measurement. Furthermore, it is found that spatially dense measurement data result in convergence with fewer iterations. Finally, although ISRA yields a nonunique solution dependent on boundary conditions, measurement errors, fitting errors, and mesh density, it accommodates for uncertainties and inaccuracies in measurement, as opposed to failing to reach a physically realistic converged solution.

42 ENGINEERING↗

ASSESSING THE EFFECTIVENESS OF ULTRASONIC IMPACT TREATMENT ON RESIDUAL STRESS PROFILES IN DISSIMILAR WELDED JOINTS

Residual stresses (RS) induced during welding processes are a critical concern in materials engineering, as they can significantly impair the mechanical performance of components by reducing fatigue strength and tensile load capacity. This challenge is especially pronounced in dissimilar metal welds (DMWs), where variations in thermal expansion properties between the joined alloys exacerbate the formation of tensile RS. Conventional post-weld heat treatments, though effective for homogeneous materials, often require substantial energy, specialized equipment, and extensive processing time, making them less practical for DMW applications. Thus, there is a clear need for innovative, energy-efficient techniques to mitigate these detrimental stresses. This study investigates ultrasonic impact treatment (UIT) as a possible alternative for mitigating tensile RS in both similar and dissimilar metal welds. To evaluate UIT’s effectiveness, neutron diffraction (ND) was employed as a nondestructive technique to quantify RS in three orthogonal directions—longitudinal, transverse, and normal. The results showed that UIT significantly reduced peak tensile RS, particularly in the longitudinal direction, by up to 180 MPa in similar welds and up to 150 MPa in dissimilar welds. Given the limited literature on UIT application in DMWs, this work contributes valuable data on stress redistribution mechanisms and highlights UIT’s potential as a practical stress-relief method. The findings lay the groundwork for further investigations aimed at optimizing process parameters and understanding long-term performance in welded joints.

EisaZadeh, Hamid [Western Carolina University, Cul↗

A Novel Mode of Photoprotection Mediated by a Cysteine Residue in the Chlorophyll Protein IsiA

Oxygenic photosynthetic organisms have evolved a multitude of mechanisms for protection against high-light stress. IsiA, a chlorophyll a-binding cyanobacterial protein, serves as an accessory antenna complex for photosystem I. Intriguingly, IsiA can also function as an independent pigment protein complex in the thylakoid membrane and facilitate the dissipation of excess energy, providing photoprotection. The molecular basis of the IsiA-mediated excitation quenching mechanism remains poorly understood. In this study, we demonstrate that IsiA uses a novel cysteine-mediated process to quench excitation energy. The single cysteine in IsiA in the cyanobacterium Synechocystis sp. strain PCC 6803 was converted to a valine. Ultrafast fluorescence spectroscopic analysis showed that this single change abolishes the excitation energy quenching ability of IsiA, thus providing direct evidence of the crucial role of this cysteine residue in energy dissipation from excited chlorophylls. Under stress conditions, the mutant cells exhibited enhanced light sensitivity, indicating that the cysteine-mediated quenching process is critically important for photoprotection.

59 BASIC BIOLOGICAL SCIENCES↗

Eliminating Signal Bias Caused by Vacuum System Backstreaming in the Diagnostic Residual Gas Analyzer of ITER

In fusion neutral gas analysis, such as with the Diagnostic Residual Gas Analyzer (DRGA) for ITER, the primary measurement range of interest comprises the low-amu species (1 to 6), especially deuterium and helium. The challenge in successfully obtaining accurate measurements is two-fold. First, the sensitivity of the method must be sufficient to resolve trace amounts accurately; typically, one percent or less. Second, the gas signal from the fusion processes must be free of bias caused by the latent presence (from system outgassing and/or vacuum backstreaming) of these gases to enable accurate interpretation of the measured signal. This latter criterion can be problematic for the lightest gases since there is a propensity for some fraction of the pumped gas load to undergo a phenomenon known as backstreaming. This behavior is manifested in pumping systems for gas properties related to relative atomic weight (lightest) and size (smallest). Backstreaming results in a significant amount of the pumped gas undertaking a reverse flow and re-entering the measurement region; thus, contaminating the forward, real-time measurement. To fully eliminate this adverse effect, a conductance-limiting device – or orifice – has been installed in the high-vacuum pumping system of the present ITER DRGA prototype. The system was already equipped with a secondary turbomolecular pump (TMP), but with limited effectiveness against backstreaming in the inter-pump volume (IPV). This orifice is placed within the suction inlet coupling of the secondary TMP, which is downstream of the IPV. Its objective is to eliminate the backstreaming phenomenon by increasing the back pressure in the IPV. However, the orifice sizing must take into consideration other factors, such as the diagnostic measurement objectives. For example, in the ITER DRGA, one of the measurement requirements is a dynamic response time of ~1s. Fortunately, an added benefit of the pumping restriction created by the orifice is that the upstream pressure increase is beneficial for the DRGA’s optical gas analysis (OGA) sensors. These sensors are attached to the IPV in the present design. The glow discharges, when used as an OGA light source, will typically have a brighter light emission with increasing plasma cell pressure. In addition to the fusion machine research sector, there are other potential applications of this pumping technique where the monitoring of lighter gas concentrations is essential, such as the photolithography process for the semiconductor fabrication of integrated circuits. This presentation will describe the vacuum system used to demonstrate a process to eliminate backstreaming as well as show test results to verify the accomplishment of this critical objective.

Marcus, Chris↗

Impact of Solenoid Induced Residual Magnetic Fields on The Prototype SSR1 CM Performance

A prototype cryomodule containing eight Single Spoke Resonators type-1 (SSR1) operating at 325 MHz and four superconducting focusing lenses was successfully assembled, cold tested, and accelerated beam in the framework of the PIP-II project at Fermilab. The impact of induced residual magnetic fields from the solenoids on performance of cavities is presented in this contribution. In addition, design optimizations for the production cryomodules as a result of this impact are highlighted.

43 PARTICLE ACCELERATORS↗

Novel Membrane and Electrodeposition-Based Separation and Recovery of Rare Earth Elements from Coal Combustion Residues (Final Report)

This project developed a hydrometallurgical-based technology to extract and concentrate rare earth elements (REEs) from a representative group of coal combustion residuals (CCRs) from major coal sources in the United States. The approach for REE recovery comprises two general components: (1) Leaching of REEs from CCRs and (2) Separation of REEs from other major ions in the CCR leachate. The leaching step entails acid leaching with nitric or hydrochloric acid, and in some cases, pretreatment of CCRs with alkaline roasting prior to acid leaching. The follow-up REE recovery steps involve a series of membrane-based methods to separate and concentrate rare earth ions from other major ions in acid leachates of CCRs. These methods include liquid emulsion membranes, supported liquid membranes and electrodeposition with carbon nanotube electrochemical filters. The advantage of these separation approaches (relative to conventional approaches such as solvent extraction) is a reduction in the usage of solvents and other costly chemicals and a reduction of hazardous waste products that are challenges in conventional REE separation methods. In the testing of our process, we selected a representative set of CCR samples from our collection and performed a suite of characterization measurements (total REE content and major mineralogy). The major results of this work demonstrated that heated acid leaching could efficiently extract REEs from PRB-based coal fly ashes while the Appalachian and Illinois Basin CCRs required alkaline roasting with NaOH prior to acid leaching at room temperature. The supported liquid membrane (SLM) configuration and electrochemical deposition (ED) system yielded the most promising methods of REE recovery from the acid leachates of fly ash. Our most concentrated product to date comprised 1 wt.% (dry basis) REEs produced from an Appalachian-based fly ash leached and purified by SLM. The SLM separation process was more selective for heavy REEs over the light REEs. When SLM was combined with ED, preliminary results demonstrated that a final product of >2 wt.% REEs was possible.

01 COAL, LIGNITE, AND PEAT↗

System Study: Residual Heat Removal 1998–2018

This report presents an unreliability evaluation of the residual heat removal (RHR) system in two modes of operation (low-pressure injection in response to a large loss-of-coolant accident and post-trip shutdown-cooling) at 104 U.S. commercial nuclear power plants. Demand, run hours, and failure data from calendar years 1998 through 2018 for selected components were obtained from the Institute of Nuclear Power Operations (INPO) Industry Reporting and Information System (IRIS), formerly the INPO Consolidated Events Database (ICES). The unreliability results are trended for the most recent 10 year period while yearly estimates for system unreliability are provided for the entire active period. No statistically significant increasing or decreasing trends were identified in the RHR results.

99 GENERAL AND MISCELLANEOUS↗

An Eight-County Appraisal of the San Andres Residual Oil Zone (ROZ) 'Fairway' of the Permian Basin

This document assesses the size and distribution of the oil resource in an eight-county portion of the San Andres residual oil zone (ROZ) fairway in the Permian Basin. Using well log analysis, the study divided the ROZ into partitions, developed a database of geologic properties for each partition and estimated the oil in place in each partition. The study then used the FE/NETL CO 2 Prophet Model to estimate the oil that could be produced and CO 2 stored from applying CO 2 EOR to each partition. With the FE/NETL Onshore CO 2 EOR Cost Model, the commercially viable partitions were identified as those that could produce oil and store CO 2 economically at an oil price of $75/STB. The remaining geologically viable partitions could use CO 2 EOR to store CO 2 with production of oil to offset some of the costs. The database used for this study, and a report describing the database is available on NETL's website under the Collection Name Eight-County San Andres ROZ Appraisal.

02 PETROLEUM↗

Eight County Permian Basin Residual Oil Zone (ROZ) Database

This document describes the spreadsheet geologic database named ROZ_SanAnd_8.xlsm used in the report, ''An Eight-County Appraisal of the San Andres Residual Oil Zone (ROZ) 'Fairway' of the Permian Basin''. The dataset provides geologic properties for ROZ partitions in San Andres formation in eight counties in the Permian Basin. The geologic data is used to estimate total oil in place in each partition and provides the inputs needed to estimate the oil that can be produced and CO 2 stored from the application of CO 2 EOR to a partition. The database and the appraisal report are available on NETL's website under the Collection Name: Eight-County San Andres ROZ Appraisal.

02 PETROLEUM↗

A Four-County Appraisal of the San Andres Residual Oil Zone (ROZ) 'Fairway' of the Permian Basin

This document assesses the size and distribution of the oil resource in a four-county portion of the San Andres residual oil zone (ROZ) fairway in the Permian Basin. Using well log analysis, the study divided the ROZ into partitions, developed a database of geologic properties for each partition and estimated the oil in place in each partition. The study then used the FE/NETL CO 2 Prophet Model to estimate the oil that could be produced and CO 2 stored from applying CO 2 EOR to each partition. With the FE/NETL Onshore CO 2 EOR Cost Model, the commercially viable partitions were identified as those that could produce oil and store CO 2 economically at an oil price of $75/STB. The remaining geologically viable partitions could use CO 2 EOR to store CO 2 with production of oil to offset some of the costs. The database used for this study, and a report describing the database is available on NETL's website under the Collection Name: Four-County San Andres ROZ Appraisal.

02 PETROLEUM↗