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At least 325 records · Page 18

Implementing belowground controls on nutrient uptake in ELMv2-SPRUCE improves representation of a boreal peatland ecosystem

Boreal peatlands store 13 %–32 % of the global soil carbon (C) stock, a service dependent on plant-mycorrhizal fungi associations. In these nutrient poor systems, ectomycorrhizal and ericoid mycorrhizal fungi supply up to >80 % of the nutrient requirements of their plant hosts, partly with mined nitrogen (N) and phosphorus (P) from soil organic matter that are otherwise inaccessible to plants. Despite the ecological significance, mycorrhizal associations are only represented in a few land surface or ecosystem models. We modify the peatland branch of version 2 of the Energy Exascale Earth System Land Model (ELMv2-SPRUCE) to replace the default photosynthesis-driven inorganic N and P (NP) uptake process with a more realistic representation of the process via three pathways: (1) direct inorganic NP uptake by uncolonized fine roots, (2) indirect inorganic NP acquisition and (3) indirect NP acquisition from organic sources by mycorrhizal roots. We systematically evaluated the performance of the default and modified models with field observations from a whole ecosystem warming and carbon dioxide fertilization experimental site: Spruce and Peatland Responses Under Changing Environment (SPRUCE), in northern Minnesota, USA. The modified model reduces the underestimation of the growth response of shrubs in the default model to warming from 40 %–80 % to 17 %–35 % and reduces the overall relative absolute error on C fluxes from 1.61 to 1.54 in calibration. Improvements on modeled shrub growths and shrub-moss community net ecosystem exchanges are also seen in validation. The improved growth response of shrubs to warming is accompanied by several-fold increase in direct inorganic NP uptake and decrease in fungal colonization rate. The modified model simulates a smaller magnitude of transition of the ecosystem from C sink to C source under warming due to alleviation of plant nutrient limitation. Equifinality analysis shows the newly added parameters in the modified model can be constrained by the observed C fluxes. Sensitivity analysis shows the newly added parameters have stronger statistical interactions than the preexisting parameters in the default model. Overall, the modified model is an improvement over the default ELMv2-SPRUCE and will be a useful tool for understanding boreal peatland change.

Wang, Yaoping [Oak Ridge National Laboratory (ORNL↗

Arctic shrub root traits, northern Alaska, summer 2017 (Version 2.0)

This data package contains root trait data collected from 170 plots of rapidly expanding shrub genera (Alnus, Betula, and Salix) and a widespread sedge (Eriophorum vaginatum) along a latitudinal and temperature gradient in northern Alaska. The trait data were collected in July 2017 and include root architecture (root diameter and branching patterns), mycorrhizal colonization (%), nitrogen concentration (%), delta 15N (per mil), and vertical root biomass. These raw data support a submitted manuscript that examines the distribution and interspecific variations of absorptive root traits of shrubs and graminoids across the graminoid-dominated nutrient-poor arctic tundra and reveals how deciduous shrub expansion affects plant nutrient acquisition strategies in tundra ecosystems. Data are presented by site (n=5) and patch (shrub or sedge plot) in separate csv files. The location data are provided in the “plot coordinates” file; all other files contain the data in the file title. Detailed methods are in Chen et al. (2020).2023/07/20 Update: The latest version of this dataset publication is version 2.0. The latest version of the data package was updated to include the alder nodule biomass dataset (alder nodule biomass.csv) and associated metadata (metadata_alder nodule biomass.csv). The name of the previous metadata file was updated (metadata_ root traits and biomass.csv ) to distinguish it from the new metadata file.

54 ENVIRONMENTAL SCIENCES↗

Investigation of the neoclassical ambipolar electric field in ion-root plasmas on W7-X

The role of the radial electric field in high-performance ion-root plasmas on Wendelstein 7-X (W7-X) is examined and compared with neoclassical predictions herein. The W7-X stellarator is the world’s first large-scale optimized stellarator. One of the important targets chosen for optimization during the W7-X design process was the reduction of core neoclassical heat transport. This optimization was targeted for reactor-relevant high-density plasmas with $T_e ≈ T_i$ in which the neoclassical ambipolar radial electric field is expected to be negative throughout the plasmas core. Measurements of the core radial electric field $(E_r)$ have confirmed that ion-root conditions (negative $(E_r)$ in the plasma core) have been achieved in W7-X with high-density plasmas and central ECRH. These measured $(E_r)$ profiles agree well with the neoclassical ambipolar $(E_r)$ predicted by the code SFINCS . This good agreement provides confidence in the validity of neoclassical calculations in high-density ion-root conditions, and enables initial studies on the role of neoclassical transport in the optimized high-density regime of W7-X. Profile measurements of electron temperature $(T_e)$, ion temperature $(T_i)$ and electron density $(n_e)$ along with approximations for the average value of $Z$ eff have been used as inputs to the sfincs code to calculate the ambipolar $E_r$ profile along with neoclassical ion and electron energy flux profiles $(Q$ NCi , $Q$ NCe $)$. Finally the total experimental energy input to the plasma from ECRH heating has been compared to the neoclassical energy fluxes to provide a first estimate for the fraction of transport that can be attributed to neoclassical processes in reactorrelevant high-density ion-root conditions.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Direct optimization of neoclassical ion transport in stellarator reactors

Abstract We directly optimize stellarator neoclassical ion transport while holding neoclassical electron transport at a moderate level, creating a scenario favorable for impurity expulsion and retaining good ion confinement. Traditional neoclassical stellarator optimization has focused on minimizing ϵ eff , the geometric factor that characterizes the amount of radial transport due to particles in the 1 / ν regime. Under expected reactor-relevant conditions, core electrons will be in the 1 / ν regime and core fuel ions will be in the ν regime. Traditional optimizations thus minimize electron transport and rely on the radial electric field ( E r ) that develops to confine the ions. This often results in an inward-pointing E r that drives high- Z impurities into the core, which may be troublesome in future reactors. In this work, we increase the ratio of the thermal transport coefficients L 11 e / L 11 i , which previous research has shown can create an outward-pointing E r . This effect is very beneficial for impurity expulsion. We obtain self-consistent density, temperature, and E r profiles at reactor-relevant conditions for an optimized equilibrium. This equilibrium is expected to enjoy significantly improved impurity transport properties.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Arctic shrub and Eriophorum leaf and root decomposition, northern Alaska, 2017-2018

This data package contains litter decomposition data collected from 170 plots of rapidly expanding shrub genera (Alnus, Betula, and Salix) and a widespread sedge (Eriophorum vaginatum) along a latitudinal and temperature gradient in northern Alaska. These data were produced from a litter bag experiment that took place from July 2017 to July 2018 and include mass loss and nitrogen loss decomposition metrics for both leaf and root litters. These raw data support a submitted manuscript that examines the variability in decomposition between shrub and graminoid leaf and root litters across a 1-year experiment across the graminoid-dominated Arctic tundra and reveals how deciduous shrub expansion affects litter decomposition in tundra ecosystems. Data are presented by site (n=5) and patch (shrub or sedge plot) in csv files. The site and plot location data and environmental measurement data are provided in Fraterrigo and Chen (2020). Additional methods regarding plot distribution and environmental measurements are in Chen et al. (2020) and Fraterrigo et al. (2024).

54 ENVIRONMENTAL SCIENCES↗

Experimental Soil Warming Impacts Soil Moisture and Plant Water Stress and Thereby Ecosystem Carbon Dynamics

Experimental soil heating experiments have found a consistent increase in soil-surface CO 2 emissions ( F s ), but inconsistent soil organic carbon (SOC) responses. Interpretation of heating effects is complicated by spatial heterogeneity and soil moisture, nitrogen availability, and microbial and plant responses. Here we applied a mechanistic ecosystem model to interpret heating impacts on a California forest subjected to 1 m deep, 4°C heating. The model accurately simulated control-plot CO 2 fluxes, SOC stocks, fine root biomass, soil moisture, and soil temperature, and the observed increases in F s and decreases in fine root biomass. We show that a complex suite of interactions can lead to a consistent increase in F s (~17%) over the 5-year study period, with very small changes in SOC stocks (<1%). Modeled increases in leaf water stress from soil drying reduced GPP and NPP. The resulting reduction in leaf and fine root allocation increased fine root litter inputs to the soil and reduced root exudation. Soil heating led to about a 50% larger increase in root autotrophic respiration than in heterotrophic respiration, with the heating effect on both these fluxes decreasing over the simulation period. Increased heterotrophic respiration led to increased soil N availability and plant N uptake. These heating responses are mechanistically linked, of magnitudes that can affect ecosystem dynamics, and long-term observations of them are rarely made. Therefore, we conclude that a coupled observational and mechanistic modeling framework is needed to interpret manipulation experiments, and to improve projections of climate change impacts on terrestrial ecosystem carbon dynamics.

54 ENVIRONMENTAL SCIENCES↗

Optically stimulated electron emission - Current-voltage response and spectral sensitivity

A highly reproducible optically stimulated electron emission (OSEE) response steel was achieved in laboratory conditions through suppression of surface photochemistry by replacing air with argon. This permitted the characterization of the OSEE process on D6AC steel as a photodiode. With a low-pressure mercury light source, most of the OSEE current is attributed to photoelectrons released by the 185-nm mercury line with only about 5 percent of the photocurrent associated with the 254-nm line. The forward current-voltage characteristic of the OSEE diode is linear for small fields changing to a square root response at larger fields. These results are all consistent with established theories.

Welch, Christopher S.↗

Programmable bionanocomposite coated fertilizers for prolonged controlled release of nitrogen

Controlled-release fertilizers (CRFs) present a promising solution for alleviating food and nutrient scarcity. However, their development has been mainly hindered by both rapid and unsynchronized nutrient release and unsustainable coating materials. In this study, we address this issue by developing a new coating layer for CRFs using a programmable biopolyurethane nanocomposite. This nanocomposite is prepared from diphenylmethane diisocyanate (MDI)-functionalized bentonite nanoclay (BNT-MDI) and a biopolyol from biomass waste. The results show that the BNT-MDI-doped CRFs (BCRFs) exhibit an impressive nitrogen (N)-release longevity of approximately 120 days at a 4 wt% coating ratio, surpassing previous CRF formulations. In a 30-day snap bean cultivation study, BCRF significantly improved root length (1000%), leaf length (257%), leaf width (400%), and plant height (1400%) compared to the control. The superior performance of BCRF is attributed to the PU-nanoclay biocomposite film, with full nano-exfoliation, controllable porosity, and high crosslinking density. Furthermore, we introduce a new dynamic release mechanism and establish a quantitative relationship between the nanostructure, property, and release performance of BCRF by combining the multiplicative and diffusion models for porous materials. Finally, this study provides a theoretical framework and a straightforward methodology for designing programmable nanocomposite structures for future biobased CRFs.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Plant diversity and functional identity drive grassland rhizobacterial community responses after 15 years of CO 2 and nitrogen enrichment

Abstract Improved understanding of bacterial community responses to multiple environmental filters over long time periods is a fundamental step to develop mechanistic explanations of plant–bacterial interactions as environmental change progresses. This is the first study to examine responses of grassland root‐associated bacterial communities to 15 years of experimental manipulations of plant species richness, functional group and factorial enrichment of atmospheric CO 2 (eCO 2 ) and soil nitrogen (+N). Across the experiment, plant species richness was the strongest predictor of rhizobacterial community composition, followed by +N, with no observed effect of eCO 2 . Monocultures of C 3 and C 4 grasses and legumes all exhibited dissimilar rhizobacterial communities within and among those groups. Functional responses were also dependent on plant functional group, where N 2 ‐fixation genes, NO 3− ‐reducing genes and P‐solubilizing predicted gene abundances increased under resource‐enriched conditions for grasses, but generally declined for legumes. In diverse plots with 16 plant species, the interaction of eCO 2 +N altered rhizobacterial composition, while +N increased the predicted abundance of nitrogenase‐encoding genes, and eCO 2 +N increased the predicted abundance of bacterial P‐solubilizing genes. Synthesis : Our findings suggest that rhizobacterial community structure and function will be affected by important global environmental change factors such as eCO 2 , but these responses are primarily contingent on plant species richness and the selective influence of different plant functional groups.

Revillini, Daniel↗

Comparison of Aerosol Optical Properties and Water Vapor Among Ground and Airborne Lidars and Sun Photometers During TARFOX

We compare aerosol optical thickness (AOT) and precipitable water vapor (PWV) measurements derived from ground and airborne lidars and sun photometers during the Tropospheric Aerosol Radiative Forcing Observational Experiment. Such comparisons are important to verify the consistency between various remote sensing measurements before employing them in any assessment of the impact of aerosols on the global radiation balance. Total scattering ratio and extinction profiles measured by the ground-based NASA Goddard Space Flight Center scanning Raman lidar system, which operated from Wallops Island, Virginia (37.86 deg N, 75.51 deg W); are compared with those measured by the Lidar Atmospheric Sensing Experiment (LASE) airborne lidar system aboard the NASA ER-2 aircraft. Bias and root-mean-square differences indicate that these measurements generally agreed within about 10%. Aerosol extinction profiles and estimates of AOT are derived from both lidar measurements using a value for the aerosol extinction/backscattering ratio S(sub a) = 60 sr for the aerosol extinction/backscattering ratio, which was determined from the Raman lidar measurements. The lidar measurements of AOT are found to be generally within 25% of the AOT measured by the NASA Ames Airborne Tracking Sun Photometer (AATS-6). However, during certain periods the lidar and Sun photometer measurements of AOT differed significantly, possibly because of variations in the aerosol physical characteristics (e.g., size, composition) which affect S(sub a). Estimates of PWV, derived from water vapor mixing ratio profiles measured by LASE, are within 5-10% of PWV derived from the airborne Sun photometer. Aerosol extinction profiles measured by both lidars show that aerosols were generally concentrated in the lowest 2-3 km.

Ferrare, R.↗

A data base of crop nutrient use, water use, and carbon dioxide exchange in a 2O square meter growth chamber: I. Wheat as a case study

A data set is given describing the daily nutrient uptake, gas exchange, environmental conditions, and carbon (C), and nutrient partitioning at harvest for the entire canopy and root system of a wheat crop (Triticum aestivum, cv. Yecora Rojo). The data were obtained from a 20 m2 stand of wheat plants grown from planting to maturity in a closed, controlled environment, and include daily nutrient uptake [macronutrients, nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), magnesium (Mg), and sulfur (S); and micronutrients, iron (Fe), boron (B), manganese (Mn), zinc (Zn), copper (Cu), and molybdenum (Mo)], canopy carbon dioxide (CO2) exchange rates, and transpiration. Environmental factors such as relative humidity, air temperature, nutrient solution temperature, pH and electrical conductivity, and photoperiod were controlled in the chamber to specific set points. A detailed description of biomass yield for each of the 64 plant growth trays comprising the 20 m2 of growth area is also provided, and includes dry weights of grain, straw, chaff, and roots, along with the concentration of nutrients in different plant tissues and the percent carbohydrate, fat, and protein. To our knowledge, this information represents one of the most extensive data sets available for a canopy of wheat grown from seed to maturity under controlled environmental and nutritional conditions, and thus may provide useful information for model development and validation. A methods section is included to qualify any assumptions that might be required for the use of the data in plant growth models, along with a daily event calendar indicating when adjustments in set points and occasional equipment or sensor failures occurred.

NASA Discipline Number 61-20↗

A Data Base of Crop Nutrient Use, Water Use, and Carbon Dioxide Exchange in a 20 Square Meter Growth Chamber: Wheat as a Case Study - Part 1

A data set is given describing the daily nutrient uptake, gas exchange, environmental conditions, and carbon (C), and nutrient partitioning at harvest for the entire canopy and root system of a wheat crop (Triticum aestivum, cv. Yecora Rojo). The data were obtained from a 20 sq m stand of wheat plants grown from planting to maturity in a closed, controlled environment, and include daily nutrient uptake [macronutrients, nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), magnesium (Mg), and sulfur (S); and micronutrients, iron (Fe), boron (B), manganese (Mn), zinc (Zn), copper (Cu), and molybdenum (Mo)], canopy carbon dioxide (CO2) exchange rates, and transpiration. Environmental factors such as relative humidity, air temperature, nutrient solution temperature, pH and electrical conductivity, and photoperiod were controlled in the chamber to specific set points. A detailed description of biomass yield for each of the 64 plant growth trays comprising the 20 sq m of growth area is also provided, and includes dry weights of grain, straw, chaff, and roots, along with the concentration of nutrients in different plant tissues and the percent carbohydrate, fat, and protein. To our knowledge, this information represents one of the most extensive data sets available for a canopy of wheat grown from seed to maturity under controlled environmental and nutritional conditions, and thus may provide useful information for model development and validation. A methods section is included to qualify any assumptions that might he required for the use of the data in plant growth models, along with a daily event calendar indicating when adjustments in set points and occasional equipment or sensor failures occurred.

Wheeler, Raymond M.↗

Blodgett 13C–labeled litter incubation 2016-2019

The dataset is from 13C-labelled (stable isotope of carbon) root-litter in-situ field incubation experiment based on the whole-soil warming experiment at the Blodgett Forest Research Station, CA, USA. The files are in both ".csv" and ".xlsx" versions, and can be opened in "maCOS numbers", and "Microsoft Excel". The files includes several sheets with all the data published in the paper: Sun, B., Zosso, C., Wiesenberg, G. L. B., Pegoraro, E., Torn, M. S., and Schmidt, M. W. I.: Warming accelerates the decomposition of root-derived hydrolysable lipids in a temperate forest and is depth- and compound class-dependent, SOIL, 11, 1077–1093, https://doi.org/10.5194/soil-11-1077-2025, 2025. This dataset includes bulk soil carbon, nitrogen, delta 13C values, the normalized concentration (to organic carbon) of hydrolysable lipids identified, the absolute concentration (normalized to bulk soil) of hydrolysable lipids, hydrolysable lipids recovery, and weighted 13C-excess of bulk soil carbon, and weighted 13C-excess of each compound class in hydrolysable lipids. These data aim to answer two research questions: 1) How will warming affect the decomposition of 13C-labelled root-litter at different depth? 2) Will the decomposition of root-derived hydrolysable lipids under warming differ among different compound classes? The experiment sites located on the foothills of the Sierra Nevada near Georgetown, CA (120°3904000W; 38°5404300 N) at 1370m above see level. The Blodgett Forest is a mixed-coniferous forest. The site has a Mediterranean climate with a mean annual air temperature of 12.5 °C and a mean annual precipitation of 1774mm.

54 ENVIRONMENTAL SCIENCES↗

PcsR2 Is a LuxR-Type Regulator That Is Upregulated on Wheat Roots and Is Unique to Pseudomonas chlororaphis

LuxR solos are common in plant-associated bacteria and increasingly recognized for playing important roles in plant-microbe interkingdom signaling. Unlike the LuxR-type transcriptional regulators of prototype LuxR/LuxI quorum sensing systems, luxR solos do not have a LuxI-type autoinducer synthase gene associated with them. LuxR solos in plant-pathogenic bacteria are important for virulence and in plant endosymbionts contribute to symbiosis. In the present study, we characterized an atypical LuxR solo, PcsR2, in the biological control species Pseudomonas chlororaphis 30–84 that is highly conserved among sequenced P. chlororaphis strains. Unlike most LuxR solos in the plant-associated bacteria characterized to date, pcsR2 is not associated with a proline iminopeptidase gene and the protein has an atypical N-terminal binding domain. We created a pcsR2 deletion mutant and used quantitative RT-PCR to show that the expression of pcsR2 and genes in the operon immediately downstream was upregulated ~10-fold when the wild type strain was grown on wheat roots compared to planktonic culture. PcsR2 was involved in upregulation. Using a GFP transcriptional reporter, we found that expression of pcsR2 responded specifically to root-derived substrates as compared to leaf-derived substrates but not to endogenous AHLs. Compared to the wild type, the mutant was impaired in the ability to utilize root carbon and nitrogen sources in wheat root macerate and to colonize wheat roots. Phenazine production and most biofilm traits previously shown to be correlated with phenazine production also were diminished in the mutant. Gene expression of several of the proteins in the phenazine regulatory network including PhzR, Pip (phenazine inducing protein) and RpeA/RpeB were reduced in the mutant, and overexpression of these genes in trans restored phenazine production in the mutant to wild-type levels, indicating PcsR2 affects the activity of the these regulatory genes upstream of RpeA/RpeB via an undetermined mechanism. Our results indicate PcsR2 upregulates the expression of the adjacent operon in response to unknown wheat root-derived signals and belongs to a novel subfamily of LuxR-type transcriptional regulators found in sequenced P. chlororaphis strains.

59 BASIC BIOLOGICAL SCIENCES↗

High-energy synchrotron flares powered by strongly radiative relativistic magnetic reconnection: 2D and 3D PIC simulations

ABSTRACT The time evolution of high-energy synchrotron radiation generated in a relativistic pair plasma energized by reconnection of strong magnetic fields is investigated with 2D and 3D particle-in-cell (PIC) simulations. The simulations in this 2D/3D comparison study are conducted with the radiative PIC code OSIRIS, which self-consistently accounts for the synchrotron radiation reaction on the emitting particles, and enables us to explore the effects of synchrotron cooling. Magnetic reconnection causes compression of the plasma and magnetic field deep inside magnetic islands (plasmoids), leading to an enhancement of the flaring emission, which may help explain some astrophysical gamma-ray flare observations. Although radiative cooling weakens the emission from plasmoid cores, it facilitates additional compression there, further amplifying the magnetic field B and plasma density n, and thus partially mitigating this effect. Novel simulation diagnostics utilizing 2D histograms in the n-B space are developed and used to visualize and quantify the effects of compression. The n-B histograms are observed to be bounded by relatively sharp power-law boundaries marking clear limits on compression. Theoretical explanations for some of these compression limits are developed, rooted in radiative resistivity or 3D kinking instabilities. Systematic parameter-space studies with respect to guide magnetic field, system size, and upstream magnetization are conducted and suggest that stronger compression, brighter high-energy radiation, and perhaps significant quantum electrodynamic effects such as pair production, may occur in environments with larger reconnection-region sizes and higher magnetization, particularly when magnetic field strengths approach the critical (Schwinger) field, as found in magnetar magnetospheres.

Schoeffler, K. M. (ORCID:0000000276447381)↗

ANDES (ARGONNE NUCLEAR DATA EXPLORATION SOFTWARE) - ndviz

The Argonne Nuclear Data Exploration Software (ANDES) is a collection of open-source C++ codes and ROOT scripts that enable the visualization of patterns emerging from nuclear data. From this global view, well-known phenomena such as major nuclear shell closures and pairing effects near N=Z nuclei, as well as more subtle features, such as quantum phase transition around the Zr isotopes or the charge radius staggering in the Hg isotopes, can be observed. This visualization tool apart from having pedagogic application can serve as a tool for discovering previously unknown phenomena in the nuclear chart.

Santiago-Gonzalez, Daniel↗

ANDES (ARGONNE NUCLEAR DATA EXPLORATION SOFTWARE) - Physics Tools

A collection of physics tools used by the ANDES. The Argonne Nuclear Data Exploration Software (ANDES) is a collection of open-source C++ codes and ROOT scripts that enable the visualization of patterns emerging from nuclear data. From this global view, well-known phenomena such as major nuclear shell closures and pairing effects near N=Z nuclei, as well as more subtle features, such as quantum phase transition around the Zr isotopes or the charge radius staggering in the Hg isotopes, can be observed. This visualization tool apart from having pedagogic application can serve as a tool for discovering previously unknown phenomena in the nuclear chart.

Santiago-Gonzalez, Daniel↗