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At least 325 records · Page 18

Flight Awareness Collaboration Tool Development

NASA is developing the Flight Awareness Collaboration Tool (FACT) to support airline and airport operations during winter storms. The goal is to reduce flight delays and cancellations due to winter weather. FACT concentrates relevant information from the Internet and FAA databases on one screen for easy access. It provides collaboration tools for those managing the winter weather event including the airline operations center, airport authority (runway treatment), the Federal Aviation Administration air traffic control tower, and de-icing operators. Prediction tools are being added to improve FACT capabilities including one that anticipates changes in airport departure rates from weather forecasts. We have formed two user teams from affected airports to guide the design and evaluate the web-based prototype. Future work includes adding more automated capabilities and conducting a simulation to evaluate FACT in a realistic environment.

Mogford, Richard↗

Unveiling the microbial realm with VEBA 2.0: a modular bioinformatics suite for end-to-end genome-resolved prokaryotic, (micro)eukaryotic and viral multi-omics from either short- or long-read sequencing

Abstract The microbiome is a complex community of microorganisms, encompassing prokaryotic (bacterial and archaeal), eukaryotic, and viral entities. This microbial ensemble plays a pivotal role in influencing the health and productivity of diverse ecosystems while shaping the web of life. However, many software suites developed to study microbiomes analyze only the prokaryotic community and provide limited to no support for viruses and microeukaryotes. Previously, we introduced the Viral Eukaryotic Bacterial Archaeal (VEBA) open-source software suite to address this critical gap in microbiome research by extending genome-resolved analysis beyond prokaryotes to encompass the understudied realms of eukaryotes and viruses. Here we present VEBA 2.0 with key updates including a comprehensive clustered microeukaryotic protein database, rapid genome/protein-level clustering, bioprospecting, non-coding/organelle gene modeling, genome-resolved taxonomic/pathway profiling, long-read support, and containerization. We demonstrate VEBA’s versatile application through the analysis of diverse case studies including marine water, Siberian permafrost, and white-tailed deer lung tissues with the latter showcasing how to identify integrated viruses. VEBA represents a crucial advancement in microbiome research, offering a powerful and accessible software suite that bridges the gap between genomics and biotechnological solutions.

59 BASIC BIOLOGICAL SCIENCES↗

Software Project Management and Measurement on the World-Wide-Web (WWW)

We briefly describe a system for forms-based, work-flow management that helps members of a software development team overcome geographical barriers to collaboration. Our system, called the Web Integrated Software Environment (WISE), is implemented as a World-Wide-Web service that allows for management and measurement of software development projects based on dynamic analysis of change activity in the workflow. WISE tracks issues in a software development process, provides informal communication between the users with different roles, supports to-do lists, and helps in software process improvement. WISE minimizes the time devoted to metrics collection and analysis by providing implicit delivery of messages between users based on the content of project documents. The use of a database in WISE is hidden from the users who view WISE as maintaining a personal 'to-do list' of tasks related to the many projects on which they may play different roles.

Callahan, John↗

UrbanScaping: Community Spatial Data Visualization & Analytics

Evaluating the electrification potential of buildings through retrofitting is crucial for reducing carbon emissions and the carbon footprint of built environments. This study leverages the Automatic Building Energy Modeling (AutoBEM) software, integrating the Model America database to create an urban context-based spatial analysis platform for community engagement and development. We selected Camp Hill Borough, PA, as a case study to analyze building-specific energy performance and evaluate the electrification potential of each building by switching to different Heating, Ventilation, and Air Conditioning (HVAC) systems and measurement components. The simulation results generated by the workflow provide retrofitting suggestions to help mitigate the carbon footprint as well as energy saving statistics of buildings. Additionally, the developed web-based interface serves as a community engagement platform, allowing residents to provide feedback and further develop interactive communication protocols. The outcomes of this project offer a baseline for community electrification planning and contribute to the design of low-carbon communities.

Chowdhury, Shovan [ORNL]↗

Description of a Website Resource for Turbulence Modeling Verification and Validation

The activities of the Turbulence Model Benchmarking Working Group - which is a subcommittee of the American Institute of Aeronautics and Astronautics (AIAA) Fluid Dynamics Technical Committee - are described. The group s main purpose is to establish a web-based repository for Reynolds-averaged Navier-Stokes turbulence model documentation, including verification and validation cases. This turbulence modeling resource has been established based on feedback from a survey on what is needed to achieve consistency and repeatability in turbulence model implementation and usage, and to document and disseminate information on new turbulence models or improvements to existing models. The various components of the website are described in detail: description of turbulence models, turbulence model readiness rating system, verification cases, validation cases, validation databases, and turbulence manufactured solutions. An outline of future plans of the working group is also provided.

Rumsey, Christopher L.↗

The Arctic-Boreal vulnerability experiment model benchmarking system

NASA's Arctic-Boreal Vulnerability Experiment (ABoVE) integrates field and airborne data into modeling and synthesis activities for understanding Arctic and Boreal ecosystem dynamics. The ABoVE Benchmarking System (ABS) is an operational software package to evaluate terrestrial biosphere models against key indicators of Arctic and Boreal ecosystem dynamics, i.e.: carbon biogeochemistry, vegetation, permafrost, hydrology, and disturbance. The ABS utilizes satellite remote sensing data, airborne data, and field data from ABoVE as well as collaborating research networks in the region, e.g.: the Permafrost Carbon Network, the International Soil Carbon Network, the Northern Circumpolar Soil Carbon Database, AmeriFlux sites, the Moderate Resolution Imaging Spectroradiometer, the Orbiting Carbon Observatory 2, and the Soil Moisture Active Passive mission. The ABS is designed to be interactive for researchers interested in having their models accurately represent observations of key Arctic indicators: a user submits model results to the system, the system evaluates the model results against a set of Arctic-Boreal benchmarks outlined in the ABoVE Concise Experiment Plan, and the user then receives a quantitative scoring of model strengths and deficiencies through a web interface. This interactivity allows model developers to iteratively improve their model for the Arctic-Boreal Region by evaluating results from successive model versions. We show here, for illustration, the improvement of the Lund–Potsdam–Jena-Wald Schnee und Landschaft (LPJwsl) version model through the ABoVE ABS as a new permafrost module is coupled to the existing model framework. The ABS will continue to incorporate new benchmarks that address indicators of Arctic-Boreal ecosystem dynamics as they become available.

ABoVE↗

Ruby on Rails Applications

Ruby on Rails is an open source web application framework for the Ruby programming language. The first application I built was a web application to manage and authenticate other applications. One of the main requirements for this application was a single sign-on service. This allowed authentication to be built in one location and be implemented in many different applications. For example, users would be able to login using their existing credentials, and be able to access other NASA applications without authenticating again. The second application I worked on was an internal qualification plan app. Previously, the viewing of employee qualifications was managed through Excel spread sheets. I built a database driven application to streamline the process of managing qualifications. Employees would be able to login securely to view, edit and update their personal qualifications.

Hochstadt, Jake↗

The NASA Fireball Network

In the summer of 2008, the NASA Meteoroid Environments Office (MEO) began to establish a video fireball network, based on the following objectives: (1) determine the speed distribution of cm size meteoroids, (2) determine the major sources of cm size meteoroids (showers/sporadic sources), (3) characterize meteor showers (numbers, magnitudes, trajectories, orbits), (4) determine the size at which showers dominate the meteor flux, (5) discriminate between re-entering space debris and meteors, and 6) locate meteorite falls. In order to achieve the above with the limited resources available to the MEO, it was necessary that the network function almost fully autonomously, with very little required from humans in the areas of upkeep or analysis. With this in mind, the camera design and, most importantly, the ASGARD meteor detection software were adopted from the University of Western Ontario's Southern Ontario Meteor Network (SOMN), as NASA has a cooperative agreement with Western's Meteor Physics Group. 15 cameras have been built, and the network now consists of 8 operational cameras, with at least 4 more slated for deployment in calendar year 2013. The goal is to have 15 systems, distributed in two or more groups east of automatic analysis; every morning, this server also automatically generates an email and a web page (http://fireballs.ndc.nasa.gov) containing an automated analysis of the previous night's events. This analysis provides the following for each meteor: UTC date and time, speed, start and end locations (longitude, latitude, altitude), radiant, shower identification, light curve (meteor absolute magnitude as a function of time), photometric mass, orbital elements, and Tisserand parameter. Radiant/orbital plots and various histograms (number versus speed, time, etc) are also produced. After more than four years of operation, over 5,000 multi-station fireballs have been observed, 3 of which potentially dropped meteorites. A database containing data on all these events, including the videos and calibration information, has been developed and is being modified to include data from the SOMN and other camera networks.

Cooke, William J.↗

Advances to a Global Agroclimatology Solar Insolation and Meteorological Parameter Data Base: Improved Solar Irradiance up to Hourly Temporal Resolution

A primary objective of NASA’s Prediction of Worldwide Energy Resource (POWER) project is to facilitate the use of NASA Earth Science data holdings within the energy, agricultural, and architectural industries. To this end daily averaged solar data from several NASA projects and metrological data from a NASA assimilation model have long been reformatted and via a user friendly web based data portal (https://power.larc.nasa.gov) at the native resolution of each data products. Potential users can access solar and metrological data in a column formatted DSSAT ASCII format by entering single site specific coordinates or from an area by entering the appropriate area coordinates. Upgrades to the POWER data portal have been implemented that result in a complete upgrade of the base solar insolation data products. From the years 1984 through 2000, a new version of the NASA/GEWEX Surface Radiation Budget (SRB) and Clouds is utilized that reduces the RMS relative to surface measurements. Additionally, Clouds and the Earth’s Radiant Energy System (CERES) SYNoptic 1x1 Degree (SYN1Deg) data products are utilized starting from January 1, 2001 through 3 months of real-time. The CERES Fast Longwave and SHortwave radiative Fluxes (FLASHFlux) is still used to provided daily data spanning from the end of SYN1Deg to within 7 days of real-time. Meteorological parameters now are taken from the NASA Modern Era Retrospective-analysis for Research and Applications (MERRA-2) data set which provides higher resolution data products (hourly and 0.5 x 625 degree) covering the entire globe. Besides updating the solar and meteorological data products, this new version features new data products such as photosynthetically active radiation (PAR), more cloud information, estimates of soil temperatures and improved options for long-term climatological data requests. More than 36+ years daily time slices are included in the combined solar and meteorological data sets. However, perhaps the most important innovation of the POWER GIS-enabled Web Services is the provision of hourly solar and meteorological data products beginning in Jan 1, 2001. The hourly values will enable more detailed modeling and crop analysis that incorporates the diurnal variability of these parameters. The new capability is made possible by utilizing both the CERES SYN1Deg and MERRA-2 data products that include parameters at these resolutions. An assessment of both the meteorological and the solar irradiance data are based upon comparisons with globally distributed surface observations. The meteorological observations from the National Center for Environmental Information’s “Integrated Surface Database” as well as the “Global Summary of the Day” (GSOD) data files. The estimates of solar insolation are compared to the Baseline Solar Radiation Network (BSRN) and other high quality surface measurement networks. Results from the uncertainty assessments demonstrates that the NASA’s meteorological and solar irradiance data can represent a viable alternative to surface observations, particularly in data sparse regions of the world.

solar irradiance↗

Chemical Recommender System: Replacement Suggestions for Small Molecules

The Chemical Recommender System (CRS) is an open-source, high-performance toolkit that enables real-time similarity searches across the complete PubChem database (over 50 million molecules) using commodity hardware. The CRS addresses critical limitations in existing chemical informatics platforms through a novel vector database infrastructure, extensible model integration capabilities, and complete algorithmic transparency. The system implements a vector database deployment with partitioned indexing that achieves a ~60x speedup over traditional approaches. A containerized model integration framework allows researchers to seamlessly incorporate custom predictive models into the full-scale search and scoring pipeline, while complete configurability of search parameters, filtering logic, and scoring functions provides capabilities not available in existing black-box solutions. Beyond structural similarity, the CRS integrates OPERA QSAR models for thermophysical and toxicity predictions, RDKit synthetic accessibility scoring, and user-defined models to compute weighted final replacement scores. The complete system is accessible through an interactive web application supporting real-time progress monitoring, post-processing score re-weighting, automated PDF reporting, and batch processing capabilities.

Nair, Parthiv Anand [Sandia National Laboratories ↗

Celebrating 10 Years of the Sub-Seasonal to Seasonal Prediction Project and Looking to the Future

The conference clearly demonstrated the increasing interest and growth of the scientific community working on the development and application of sub-seasonal to seasonal prediction since the start of the World Weather Research Programme (WWRP)/World Climate Research Programme (WCRP) sub-seasonal to seasonal (S2S) prediction project in 2013. The conference, which was held at the University of Reading (United Kingdom), was organized into three main themes as briefly summarized below, with eleven invited talks, 74 oral contributed talks, and 101 posters. The conference also included a two-hour breakout session, wherein eight groups discussed the current state and prospect for S2S prediction, and an early career researcher event. A summary of these discussions and recommendations is presented below. The conference web page (https://research.reading.ac.uk/s2s-summit2023/) is archived at the University of Reading. Introductory comments by representatives of the World Meteorological Organization (WMO) WWRP and WCRP emphasized the importance of the weather–climate linkage, targeted by S2S forecasts (from 2 weeks to a season ahead), addressing the challenges of creating “end-to-end” forecasts that encompass the entire climate-services chain from the prediction science and forecast, to the development and issuing of forecast products tailored to informing user-decisions. They also emphasized the efficacy of multi-model ensemble efforts and databases to foster collaborations internationally and between operational centres and academia. Although the WWRP/WCRP S2S project comes to an end in 2023, S2S prediction will remain an important focus for WWRP and WCRP. In WWRP, a new project called SAGE (Sub-seasonal to seasonal predictions for Agriculture and Environment) will start in 2024. Another important legacy of the S2S project will be the maintenance of the S2S database (Vitart et al. 2017) and the establishment of a WMO Lead Center for sub-seasonal prediction multi-model ensemble (LC-SSPMME) which will provide real-time multi-model S2S climate information. In two keynote presentations, Prof. Brian Hoskins (University of Reading) and Dr. Gilbert Brunet (Australian Bureau of Meteorology) discussed the potential of S2S predictability and the ongoing journey for understanding and improving these predictions. This conference was a sequel to the International Conference on Sub-seasonal to Seasonal Prediction (Robertson et al., 2014) which took place in College Park (Maryland, USA) in February 2014 to celebrate the start of the WWRP/WCRP S2S project, and to WCRP and WWRP conferences in Boulder, USA, in 2018 (Merryfield et al., 2020). A significant development compared to the previous S2S conferences was the large number of presentations on research to operation (R2O) and S2S applications and on the use of artificial intelligence and machine learning (AI/ML) methods for S2S prediction. Some of these methods provide empirical S2S forecasts which are competitive with state-of-the-art dynamical models. Other presentations demonstrated that AI/ML can provide alternative calibration of dynamical model outputs to traditional methods. Several talks and posters highlighted the increasing use of AI/ML, including deep learning, in S2S forecast post-processing and using AI to identify higher flow-dependent skill. Finally, some presentations demonstrated the value of AI/ML methods for a better understanding of S2S sources of predictability and attribution of extreme events.

S. J. Woolnough↗

Mission Configuration Tree for the James Webb Space Telescope (JWST)

The GSFC Mission Configuration web-based application is a means of documenting the structure of the many elements used in building each mission that NASA launches, as well as archiving the documents associated with each of these elements and keeping track of suppliers. This includes all available drawings, engineering orders, parts lists, block diagrams, and photos of each system, subsystem, and component. While the information for several of NASA's missions is being input into Mission Configuration, the ten weeks of this project focused on collecting information for the instrument systems of the James Webb Space Telescope. Documents were collected from a database called the Next Generation Integrated Network (NGIN) so that they can eventually be uploaded into the application. From these documents, including drawings and parts lists, a configuration tree was created in Microsoft Visio which showed the relationships between each system, subsystem, and component. When both these documents and the configuration tree are input into Mission Configuration, they will be place into a drill down tree structure, from which drawings and documents can be accessed directly. Mission Configuration also includes search functions that make all parts searchable by keywords such as vendor, part number, taxonomy, and alternate nomenclature. This application is an important resource for providing access to documents related to the components used on each mission. It has created a central repository for information which can be used to benefit Safety & Mission Assurance, but may also be useful across codes. The process of collecting the information and documents to put into Mission Configuration is also allowing for a concise breakdown of information from diverse formats, creating standardization which makes information more readily accessible, while retaining project-specific information that makes it more easily searchable.

Cain, Mary C.↗

Spreadsheets for Analyzing and Optimizing Space Missions

XCALIBR (XML Capability Analysis LIBRary) is a set of Extensible Markup Language (XML) database and spreadsheet- based analysis software tools designed to assist in technology-return-on-investment analysis and optimization of technology portfolios pertaining to outer-space missions. XCALIBR is also being examined for use in planning, tracking, and documentation of projects. An XCALIBR database contains information on mission requirements and technological capabilities, which are related by use of an XML taxonomy. XCALIBR incorporates a standardized interface for exporting data and analysis templates to an Excel spreadsheet. Unique features of XCALIBR include the following: It is inherently hierarchical by virtue of its XML basis. The XML taxonomy codifies a comprehensive data structure and data dictionary that includes performance metrics for spacecraft, sensors, and spacecraft systems other than sensors. The taxonomy contains >700 nodes representing all levels, from system through subsystem to individual parts. All entries are searchable and machine readable. There is an intuitive Web-based user interface. The software automatically matches technologies to mission requirements. The software automatically generates, and makes the required entries in, an Excel return-on-investment analysis software tool. The results of an analysis are presented in both tabular and graphical displays.

Some, Raphael R.↗

HILIGT, Upper Limit Servers II - Implementing the Data Servers

The High-Energy Light curve Generator(HILIGT) is a new web-based tool which allows the user to generate long-term light curves of X-ray sources. It provides historical data and calculates upper limits from image data in real-time. HILIGT utilizes data from twelve satellites, both modern missions such as XMM-Newton and Swift, and earlier facilities such as ROSAT, EXOSAT, Einstein or Ariel V. Together, this enables the user to query 50 years of X-ray data and, for instance, study outburst behavior of transient sources. In this paper we focus on the individual back-end servers for each satellite, detailing the software layout, database design, catalog calls, and image footprints. We compile all relevant calibration information of these missions and provide an in-depth summary of the details of X-ray astronomical instrumentation and data.

Ole Konig↗

Big-data Efficient and Automated Science Transfer (BEAST): An Open-Source Software Architecture for Arc Jet Data Management, Modeling, and Automation

Big-data Efficient and Automated Science Transfer (BEAST) is a facility data management application developed for the NASA Ames arc jet facilities. The current decentralized data management practices limit statistical tracking, synchronization between video/time series, search capability, data throughput, and data processing speed/efficiency. Consequently, BEAST was developed to provide a new data infrastructure with streamlined data collection, processing, transfer, and analysis. This new framework also seeks to implement the FAIR principles of data stewardship: Findable, Accessible, Interoperable, and Reusable. The BEAST framework is based on a combination of the Python Django web framework and the Python data stack to provide a monolithic, open-source platform for data management, automation, and machine learning. This architecture was chosen for maintainability and scalability for a small, in-house development team. This paper will describe the application framework, deployment, and discuss the benefits and future plans for the system.

Data management↗

Big-data Efficient Automated Science Transfer (BEAST): an open-source software architecture for arc jet data management, modeling, and automation

Big-data Efficient and Automated Science Transfer (BEAST) was conceived to address the existing ground testing data management of the NASA Ames arc jet facilities (e.g., manually entered Excel files and USB drive data transfers). These data management practices were seen as a choke point for future thermal protection system (TPS) development as they limit statistical tracking, resolution of diagnostics, coordination between video/time series, data throughput, and data processing speed/efficiency. Consequently, BEAST was developed to provide a new data infrastructure with streamlined data collection, processing, transfer, and analysis. This new framework also seeks to implement the FAIR principles of data stewardship: Findable, Accessible, Interoperable, and Reusable. The BEAST framework is based on a combination of the Python Django web framework and the Python data stack to provide a monolithic, open-source platform for data management, automation, and machine learning. This architecture was chosen for maintainability and scalability for a small, in-house development team. This paper will describe the application framework, deployment, and discuss the benefits and future plans for the system.

Data management↗

Linear Subpixel Learning Algorithm for Land Cover Classification from WELD using High Performance Computing

In this work, we use a Fully Constrained Least Squares Subpixel Learning Algorithm to unmix global WELD (Web Enabled Landsat Data) to obtain fractions or abundances of substrate (S), vegetation (V) and dark objects (D) classes. Because of the sheer nature of data and compute needs, we leveraged the NASA Earth Exchange (NEX) high performance computing architecture to optimize and scale our algorithm for large-scale processing. Subsequently, the S-V-D abundance maps were characterized into 4 classes namely, forest, farmland, water and urban areas (with NPP-VIIRS-national polar orbiting partnership visible infrared imaging radiometer suite nighttime lights data) over California, USA using Random Forest classifier. Validation of these land cover maps with NLCD (National Land Cover Database) 2011 products and NAFD (North American Forest Dynamics) static forest cover maps showed that an overall classification accuracy of over 91 percent was achieved, which is a 6 percent improvement in unmixing based classification relative to per-pixel-based classification. As such, abundance maps continue to offer an useful alternative to high-spatial resolution data derived classification maps for forest inventory analysis, multi-class mapping for eco-climatic models and applications, fast multi-temporal trend analysis and for societal and policy-relevant applications needed at the watershed scale.

Subpixel↗

Geographic Information Systems and Web Page Development

The Facilities Engineering and Architectural Branch is responsible for the design and maintenance of buildings, laboratories, and civil structures. In order to improve efficiency and quality, the FEAB has dedicated itself to establishing a data infrastructure based on Geographic Information Systems, GIS. The value of GIS was explained in an article dating back to 1980 entitled "Need for a Multipurpose Cadastre" which stated, "There is a critical need for a better land-information system in the United States to improve land-conveyance procedures, furnish a basis for equitable taxation, and provide much-needed information for resource management and environmental planning." Scientists and engineers both point to GIS as the solution. What is GIS? According to most text books, Geographic Information Systems is a class of software that stores, manages, and analyzes mapable features on, above, or below the surface of the earth. GIS software is basically database management software to the management of spatial data and information. Simply put, Geographic Information Systems manage, analyze, chart, graph, and map spatial information. GIS can be broken down into two main categories, urban GIS and natural resource GIS. Further still, natural resource GIS can be broken down into six sub-categories, agriculture, forestry, wildlife, catchment management, archaeology, and geology/mining. Agriculture GIS has several applications, such as agricultural capability analysis, land conservation, market analysis, or whole farming planning. Forestry GIs can be used for timber assessment and management, harvest scheduling and planning, environmental impact assessment, and pest management. GIS when used in wildlife applications enables the user to assess and manage habitats, identify and track endangered and rare species, and monitor impact assessment.

Reynolds, Justin↗