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At least 325 records · Page 18

Implicit finite-difference methods for the Euler equations

The present paper is concerned with two-dimensional Euler equations and with schemes which are in use of the time of this writing. Most of the development presented carries over directly to three dimensions. The characteristics of the two-dimensional Euler equations in Cartesian coordinates are considered along with generalized curvilinear coordinate transformations, metric relations, invariants of the transformation, flux Jacobian matrices and eigensystems, numerical algorithms, flux split algorithms, implicit and explicit nonlinear control (smoothing), upwind differencing in supersonic regions, unsteady and steady-state computation, the diagonal form of implicit algorithm, metric differencing and invariants, boundary conditions, geometry and mesh generation, and sample solutions.

Pulliam, T. H.↗

Thermal instabilities in protogalactic clouds

The means by which a protogalaxy can fragment to form the first generation of stars and globular clusters remains an important problem in astrophysics. Gravitational instabilities grow on timescales too long to drive fragmentation before the background density grows by many orders of magnitude (see Murray and Lin 1989a, and references therein). Thermal instability provides a much more likely mechanism. After its initial collapse, a protogalactic cloud is expected to be shock heated to its virial temperature approx. 10(exp 6) K. Cooling by H and He+ below 10(exp 6) K has a negative slope, so that the cloud is subject to strong thermal instabilities. Density enhancements may then grow rapidly, fragmenting the protogalaxy as it cools to lower temperatures. The role of dynamical effects upon the growth of perturbations is considered here. The method used is similar to that used in Murray and Lin (1989a; see also the Erratum to appear September 15), which examined the growth of thermal instabilities with a one-dimensional Lagrangian hydrodynamics code, written for spherical symmetry. Perturbed regions therefore take the form of shells. The dynamical variables are integrated explicitly, while the temperature, ionization fraction, and molecular fraction are integrated implicitly, and account is taken for non-equilibrium values of these quantities.

Murray, S. D.↗

A time-split finite-volume algorithm for three-dimensional flow-field simulation

A general finite-volume algorithm is developed for solving three-dimensional, time-dependent, compressible Navier-Stokes equations for high Reynolds number flows over an arbitrary geometry. This algorithm adapts MacCormack's (1982) explicit-implicit scheme to a time-split, three-dimensional finite-volume concept in a general coordinate system. It is shown that the thin-layer approximation in all three spatial directions significantly reduces the evaluation of viscous terms and allows the algorithm to solve more complicated geometries with all boundaries in two or all three directions. The calculated results using this method are found to be in good agreement with the experimental measurements of a blunt-fin induced shock wave and boundary-layer interaction problems. Observations of the existence of peak pressure, primary horseshoe and secondary vortices, and reversed supersonic zones show that computational fluid dynamics can effectively supplement the wind tunnel tests for aerodynamic design as well as for understanding basic fluid dynamics.

Hung, C. M.↗

Time integration algorithms for the two-dimensional Euler equations on unstructured meshes

Explicit and implicit time integration algorithms for the two-dimensional Euler equations on unstructured grids are presented. Both cell-centered and cell-vertex finite volume upwind schemes utilizing Roe's approximate Riemann solver are developed. For the cell-vertex scheme, a four-stage Runge-Kutta time integration, a fourstage Runge-Kutta time integration with implicit residual averaging, a point Jacobi method, a symmetric point Gauss-Seidel method and two methods utilizing preconditioned sparse matrix solvers are presented. For the cell-centered scheme, a Runge-Kutta scheme, an implicit tridiagonal relaxation scheme modeled after line Gauss-Seidel, a fully implicit lower-upper (LU) decomposition, and a hybrid scheme utilizing both Runge-Kutta and LU methods are presented. A reverse Cuthill-McKee renumbering scheme is employed for the direct solver to decrease CPU time by reducing the fill of the Jacobian matrix. A comparison of the various time integration schemes is made for both first-order and higher order accurate solutions using several mesh sizes, higher order accuracy is achieved by using multidimensional monotone linear reconstruction procedures. The results obtained for a transonic flow over a circular arc suggest that the preconditioned sparse matrix solvers perform better than the other methods as the number of elements in the mesh increases.

Slack, David C.↗

An approximation concepts method for space frame synthesis

A method is presented for the minimum mass design of three dimensional space frames constructed of thin walled rectangular cross-section members. Constraints on nodal displacements and rotations, material stress, local buckling, and cross sectional dimensions are included. A high quality separable approximate problem is formed in terms of the reciprocals of the four section properties of the frame element cross section, replacing all implicit functions with simplified explicit relations. The cross sectional dimensions are efficiently calculated without using multilevel techniques. Several test problems are solved, demonstrating that a series of approximate problem solutions converge rapidly to an optimal design.

Mills-Curran, W. C.↗

DNA Recombinase Proteins, their Function and Structure in the Active Form, a Computational Study

Homologous recombination is a crucial sequence of reactions in all cells for the repair of double strand DNA (dsDNA) breaks. While it was traditionally considered as a means for generating genetic diversity, it is now known to be essential for restart of collapsed replication forks that have met a lesion on the DNA template (Cox et al., 2000). The central stage of this process requires the presence of the DNA recombinase protein, RecA in bacteria, RadA in archaea, or Rad51 in eukaryotes, which leads to an ATP-mediated DNA strand-exchange process. Despite many years of intense study, some aspects of the biochemical mechanism, and structure of the active form of recombinase proteins are not well understood. Our theoretical study is an attempt to shed light on the main structural and mechanistic issues encountered on the RecA of the e-coli, the RecA of the extremely radio resistant Deinococcus Radiodurans (promoting an inverse DNA strand-exchange repair), and the homolog human Rad51. The conformational changes are analyzed for the naked enzymes, and when they are linked to ATP and ADP. The average structures are determined over 2ns time scale of Langevian dynamics using a collision frequency of 1.0 ps(sup -1). The systems are inserted in an octahedron periodic box with a 10 Angstrom buffer of water molecules explicitly described by the TIP3P model. The corresponding binding free energies are calculated in an implicit solvent using the Poisson-Boltzmann solvent accessible surface area, MM-PBSA model. The role of the ATP is not only in stabilizing the interaction RecA-DNA, but its hydrolysis is required to allow the DNA strand-exchange to proceed. Furthermore, we extended our study, using the hybrid QM/MM method, on the mechanism of this chemical process. All the calculations were performed using the commercial code Amber 9.

Carra, Claudio↗

Three Dimensional Aerodynamic Analysis of a High-Lift Transport Configuration

Two computational methods, a surface panel method and an Euler method employing unstructured grid methodology, were used to analyze a subsonic transport aircraft in cruise and high-lift conditions. The computational results were compared with two separate sets of flight data obtained for the cruise and high-lift configurations. For the cruise configuration, the surface pressures obtained by the panel method and the Euler method agreed fairly well with results from flight test. However, for the high-lift configuration considerable differences were observed when the computational surface pressures were compared with the results from high-lift flight test. On the lower surface of all the elements with the exception of the slat, both the panel and Euler methods predicted pressures which were in good agreement with flight data. On the upper surface of all the elements the panel method predicted slightly higher suction compared to the Euler method. On the upper surface of the slat, pressure coefficients obtained by both the Euler and panel methods did not agree with the results of the flight tests. A sensitivity study of the upward deflection of the slat from the 40 deg. flap setting suggested that the differences in the slat deflection between the computational model and the flight configuration could be one of the sources of this discrepancy. The computation time for the implicit version of the Euler code was about 1/3 the time taken by the explicit version though the implicit code required 3 times the memory taken by the explicit version.

Dodbele, Simha S.↗

New, Improved Bulk-microphysical Schemes for Studying Precipitation Processes in WRF: Comparisons with Other Schemes - Part 1

Advances in computing power allow atmospheric prediction models to be mn at progressively finer scales of resolution, using increasingly more sophisticated physical parameterizations and numerical methods. The representation of cloud microphysical processes is a key component of these models, over the past decade both research and operational numerical weather prediction models have started using more complex microphysical schemes that were originally developed for high-resolution cloud-resolving models (CRMs). A recent report to the United States Weather Research Program (USWRP) Science Steering Committee specifically calls for the replacement of implicit cumulus parameterization schemes with explicit bulk schemes in numerical weather prediction (NWP) as part of a community effort to improve quantitative precipitation forecasts (QPF). An improved Goddard bulk microphysical parameterization is implemented into a state-of the-art of next generation of Weather Research and Forecasting (WRF) model. High-resolution model simulations are conducted to examine the impact of microphysical schemes on two different weather events (a midlatitude linear convective system and an Atllan"ic hurricane). The results suggest that microphysics has a major impact on the organization and precipitation processes associated with a summer midlatitude convective line system. The 31CE scheme with a cloud ice-snow-hail configuration led to a better agreement with observation in terms of simulated narrow convective line and rainfall intensity. This is because the 3ICE-hail scheme includes dense ice precipitating (hail) particle with very fast fall speed (over 10 m/s). For an Atlantic hurricane case, varying the microphysical schemes had no significant impact on the track forecast but did affect the intensity (important for air-sea interaction)

Tao, W.-K.↗

Diabatic forcing and intialization with assimilation of cloud water and rainwater in a forecast model

In this study, diabatic forcing, and liquid water assimilation techniques are tested in a semi-implicit hydrostatic regional forecast model containing explicit representations of grid-scale cloud water and rainwater. Diabatic forcing, in conjunction with diabatic contributions in the initialization, is found to help the forecast retain the diabatic signal found in the liquid water or heating rate data, consequently reducing the spinup time associated with grid-scale precipitation processes. Both observational Special Sensor Microwave/Imager (SSM/I) and model-generated data are used. A physical retrieval method incorporating SSM/I radiance data is utilized to estimate the 3D distribution of precipitating storms. In the retrieval method the relationship between precipitation distributions and upwelling microwave radiances is parameterized, based upon cloud ensemble-radiative model simulations. Regression formulae relating vertically integrated liquid and ice-phase precipitation amounts to latent heating rates are also derived from the cloud ensemble simulations. Thus, retrieved SSM/I precipitation structures can be used in conjunction with the regression-formulas to infer the 3D distribution of latent heating rates. These heating rates are used directly in the forecast model to help initiate Tropical Storm Emily (21 September 1987). The 14-h forecast of Emily's development yields atmospheric precipitation water contents that compare favorably with coincident SSM/I estimates.

Raymond, William H.↗

Stability of mixing layers

The research program for the first year of this project (see the original research proposal) consists of developing an explicit marching scheme for solving the parabolized stability equations (PSE). Performing mathematical analysis of the computational algorithm including numerical stability analysis and the determination of the proper boundary conditions needed at the boundary of the computation domain are implicit in the task. Before one can solve the parabolized stability equations for high-speed mixing layers, the mean flow must first be found. In the past, instability analysis of high-speed mixing layer has mostly been performed on mean flow profiles calculated by the boundary layer equations. In carrying out this project, it is believed that the boundary layer equations might not give an accurate enough nonparallel, nonlinear mean flow needed for parabolized stability analysis. A more accurate mean flow can, however, be found by solving the parabolized Navier-Stokes equations. The advantage of the parabolized Navier-Stokes equations is that its accuracy is consistent with the PSE method. Furthermore, the method of solution is similar. Hence, the major part of the effort of the work of this year has been devoted to the development of an explicit numerical marching scheme for the solution of the Parabolized Navier-Stokes equation as applied to the high-seed mixing layer problem.

Tam, Christopher↗

Time-asymptotic solutions of the Navier-Stokes equation for free shear flows using an alternating-direction implicit method

An uncoupled time asymptotic alternating direction implicit method for solving the Navier-Stokes equations was tested on two laminar parallel mixing flows. A constant total temperature was assumed in order to eliminate the need to solve the full energy equation; consequently, static temperature was evaluated by using algebraic relationship. For the mixing of two supersonic streams at a Reynolds number of 1,000, convergent solutions were obtained for a time step 5 times the maximum allowable size for an explicit method. The solution diverged for a time step 10 times the explicit limit. Improved convergence was obtained when upwind differencing was used for convective terms. Larger time steps were not possible with either upwind differencing or the diagonally dominant scheme. Artificial viscosity was added to the continuity equation in order to eliminate divergence for the mixing of a subsonic stream with a supersonic stream at a Reynolds number of 1,000.

Rudy, D. H.↗

Human Reliability Analysis: An Overview

Human/process error is potentially a large contributor to failures of aerospace systems. For some systems, such as the space shuttle main engine, large amounts of data are available, and accurate failure rates can be determined empirically. For such systems, the human error is implicit in the empirical failure rate and does not need to be quantified separately. However, for other systems, such as the solid rocket boosters, large amounts of data are not available and the failure rates must be determined by more theoretical means. When empirical data is lacking, structural models and engineering judgment must be employed. In this case, the human/process error must be modeled explicitly. An extensive literature review was performed to determine what methods already exist for modeling human error for aerospace systems. No methods that apply directly were found, although there are a number of methods that have been developed specifically for the nuclear power industry that could probably be modified for space applications. The results of the literature review are presented, as well as recommendations for future research.

Navard, Sharon E.↗

High Performance Parallel Methods for Space Weather Simulations

This is the final report of our NASA AISRP grant entitled 'High Performance Parallel Methods for Space Weather Simulations'. The main thrust of the proposal was to achieve significant progress towards new high-performance methods which would greatly accelerate global MHD simulations and eventually make it possible to develop first-principles based space weather simulations which run much faster than real time. We are pleased to report that with the help of this award we made major progress in this direction and developed the first parallel implicit global MHD code with adaptive mesh refinement. The main limitation of all earlier global space physics MHD codes was the explicit time stepping algorithm. Explicit time steps are limited by the Courant-Friedrichs-Lewy (CFL) condition, which essentially ensures that no information travels more than a cell size during a time step. This condition represents a non-linear penalty for highly resolved calculations, since finer grid resolution (and consequently smaller computational cells) not only results in more computational cells, but also in smaller time steps.

Hunter, Paul↗

An unconditionally stable Runge-Kutta method for unsteady rotor-stator interaction

A quasi-three-dimensional analysis has been developed for unsteady rotor-stator interaction in turbomachinery. The analysis solves the unsteady Euler or thin-layer Navier-Stokes equations in a body-fitted coordinate system. It accounts for the effects of rotation, radius change, and stress-surface thickness. The Baldwin-Lomax eddy-viscosity model is used for turbulent flows. The equations are integrated in time using an explicit four-stage Runge-Kutta scheme with a constant time step. Implicit residual smoothing is used to increase the stability limit of the time-accurate computations. The scheme is described, and stability and accuracy analyses are given.

Chima, Rodrick V.↗

Parallel implicit unstructured grid Euler solvers

A mesh-vertex finite volume scheme for solving the Euler equations on triangular unstructured meshes is implemented on an MIMD (multiple instruction/multiple data stream) parallel computer. An explicit four-stage Runge-Kutta scheme is used to solve two-dimensional flow problems. A family of implicit schemes is also developed to solve these problems, where the linear system that arises at each time step is solved by a preconditioned GMRES algorithm. Two partitioning strategies are employed, one that partitions triangles and the other that partitions vertices. The choice of the preconditioner in a distributed memory setting is discussed. All the methods are compared both in terms of elapsed times and convergence rates. It is shown that the implicit schemes offer adequate parallelism at the expense of minimal sequential overhead. The use of a global coarse grid to further minimize this overhead is also investigated. The schemes are implemented on a distributed memory parallel computer, the iPSC/860.

Venkatakrishnan, V.↗

On the numerical solution of time-dependent viscous incompressible fluid flows involving solid boundaries

An inherent numerical problem associated with the fully explicit pseudospectral numerical simulation of the incompressible Navier-Stokes equation for viscous flows with no-slip walls is described. A semi-implicit scheme which circumvents this numerical difficulty is presented. In this algorithm the equation of continuity rather than the Poisson equation for pressure is solved directly. Pseudospectral formulation of the channel flow problem using Fourier series and Chebyshev polynomials expansions is given for this scheme. An example demonstrating the applicability of the method is given.

Moin, P.↗

Parallel implicit unstructured grid Euler solvers

A mesh-vertex finite volume scheme for solving the Euler equations on triangular unstructured meshes is implemented on a multiple-instruction/multiple-data stream parallel computer. An explicit four-stage Runge-Kutta scheme is used to solve two-dimensional flow problems. A family of implicit schemes is also developed to solve these problems, where the linear system that arises at each time step is solved by a preconditioned GMRES algorithm. Two partitioning strategies are employed: one that partitions triangles and the other that partitions vertices. The choice of the preconditioner in a distributed memory setting is discussed. All of the methods are compared both in terms of elapsed times and convergence rates. It is shown that the implicit schemes offer adequate parallelism at the expense of minimal sequential overhead. The use of a global coarse grid to further minimize this overhead is also investigated. The schemes are implemented on a distributed memory parallel computer, the Intel iPSC/860.

TRT-THEORETICAL↗

Sparse-grid discontinuous Galerkin methods for the Vlasov–Poisson–Lenard–Bernstein model

Sparse-grid methods have recently gained interest in reducing the computational cost of solving high-dimensional kinetic equations. In this paper, we construct adaptive and hybrid sparse-grid methods for the Vlasov–Poisson–Lenard–Bernstein (VPLB) model. This model has applications to plasma physics and is simulated in two reduced geometries: a 0x3v space homogeneous geometry and a 1x3v slab geometry. Here we use the discontinuous Galerkin (DG) method as a base discretization due to its high-order accuracy and ability to preserve important structural properties of partial differential equations. We utilize a multiwavelet basis expansion to determine the sparse-grid basis and the adaptive mesh criteria. We analyze the proposed sparse-grid methods on a suite of three test problems by computing the savings afforded by sparse-grids in comparison to standard solutions of the DG method. The results are obtained using the adaptive sparse-grid discretization library ASGarD.

97 MATHEMATICS AND COMPUTING↗