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At least 325 records · Page 18

Federated Giovanni: A Distributed Web Service for Analysis and Visualization of Remote Sensing Data

The Geospatial Interactive Online Visualization and Analysis Interface (Giovanni) is a popular tool for users of the Goddard Earth Sciences Data and Information Services Center (GES DISC) and has been in use for over a decade. It provides a wide variety of algorithms and visualizations to explore large remote sensing datasets without having to download the data and without having to write readers and visualizers for it. Giovanni is now being extended to enable its capabilities at other data centers within the Earth Observing System Data and Information System (EOSDIS). This Federated Giovanni will allow four other data centers to add and maintain their data within Giovanni on behalf of their user community. Those data centers are the Physical Oceanography Distributed Active Archive Center (PO.DAAC), MODIS Adaptive Processing System (MODAPS), Ocean Biology Processing Group (OBPG), and Land Processes Distributed Active Archive Center (LP DAAC). Three tiers are supported: Tier 1 (GES DISC-hosted) gives the remote data center a data management interface to add and maintain data, which are provided through the Giovanni instance at the GES DISC. Tier 2 packages Giovanni up as a virtual machine for distribution to and deployment by the other data centers. Data variables are shared among data centers by sharing documents from the Solr database that underpins Giovanni's data management capabilities. However, each data center maintains their own instance of Giovanni, exposing the variables of most interest to their user community. Tier 3 is a Shared Source model, in which the data centers cooperate to extend the infrastructure by contributing source code.

Giovanni↗

Federated Giovanni

Federated Giovanni is a NASA-funded ACCESS project to extend the scope of the GES DISC Giovanni online analysis tool to 4 other Distributed Active Archive Centers within EOSDIS: OBPG, LP-DAAC, MODAPS and PO.DAAC. As such, it represents a significant instance of sharing technology across the DAACs. We also touch on several sub-areas that are also sharable, such as Giovanni URLs, workflows and OGC-accessible services.

analysis↗

GeneLab Phase 2: Integrated Search Data Federation of Space Biology Experimental Data

The GeneLab project is a science initiative to maximize the scientific return of omics data collected from spaceflight and from ground simulations of microgravity and radiation experiments, supported by a data system for a public bioinformatics repository and collaborative analysis tools for these data. The mission of GeneLab is to maximize the utilization of the valuable biological research resources aboard the ISS by collecting genomic, transcriptomic, proteomic and metabolomic (so-called omics) data to enable the exploration of the molecular network responses of terrestrial biology to space environments using a systems biology approach. All GeneLab data are made available to a worldwide network of researchers through its open-access data system. GeneLab is currently being developed by NASA to support Open Science biomedical research in order to enable the human exploration of space and improve life on earth. Open access to Phase 1 of the GeneLab Data Systems (GLDS) was implemented in April 2015. Download volumes have grown steadily, mirroring the growth in curated space biology research data sets (61 as of June 2016), now exceeding 10 TB/month, with over 10,000 file downloads since the start of Phase 1. For the period April 2015 to May 2016, most frequently downloaded were data from studies of Mus musculus (39) followed closely by Arabidopsis thaliana (30), with the remaining downloads roughly equally split across 12 other organisms (each 10 of total downloads). GLDS Phase 2 is focusing on interoperability, supporting data federation, including integrated search capabilities, of GLDS-housed data sets with external data sources, such as gene expression data from NIHNCBIs Gene Expression Omnibus (GEO), proteomic data from EBIs PRIDE system, and metagenomic data from Argonne National Laboratory's MG-RAST. GEO and MG-RAST employ specifications for investigation metadata that are different from those used by the GLDS and PRIDE (e.g., ISA-Tab). The GLDS Phase 2 system will implement a Google-like, full-text search engine using a Service-Oriented Architecture by utilizing publicly available RESTful web services Application Programming Interfaces (e.g., GEO Entrez Programming Utilities) and a Common Metadata Model (CMM) in order to accommodate the different metadata formats between the heterogeneous bioinformatics databases. GLDS Phase 2 completion with fully implemented capabilities will be made available to the general public in September 2017.

Space Biology↗

NASA's GeneLab Phase II: Federated Search and Data Discovery

GeneLab is currently being developed by NASA to accelerate 'open science' biomedical research in support of the human exploration of space and the improvement of life on earth. Phase I of the four-phase GeneLab Data Systems (GLDS) project emphasized capabilities for submission, curation, search, and retrieval of genomics, transcriptomics and proteomics ('omics') data from biomedical research of space environments. The focus of development of the GLDS for Phase II has been federated data search for and retrieval of these kinds of data across other open-access systems, so that users are able to conduct biological meta-investigations using data from a variety of sources. Such meta-investigations are key to corroborating findings from many kinds of assays and translating them into systems biology knowledge and, eventually, therapeutics.

exobiology↗

NASAs GeneLab Phase II: Federated Search and Data Discovery

GeneLab is currently being developed by NASA to accelerate open science biomedical research in support of the human exploration of space and the improvement of life on earth. Phase I of the four-phase GeneLab Data Systems (GLDS) project emphasized capabilities for submission, curation, search, and retrieval of genomics, transcriptomics and proteomics (omics) data from biomedical research of space environments. The focus of development of the GLDS for Phase II has been federated data search for and retrieval of these kinds of data across other open-access systems, so that users are able to conduct biological meta-investigations using data from a variety of sources. Such meta-investigations are key to corroborating findings from many kinds of assays and translating them into systems biology knowledge and, eventually, therapeutics.

genome↗

Publishing Variables Archived at GES DISC to Earth System Grid Federation (ESGF)

We present a straightforward and low-cost approach to publish variables archived at NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) to the Earth System Grid Federation (ESGF). An ESGF publication requires a single standard-name variable aggregated over time to facilitate data inter-comparison. It also contains significant metadata to enable searching in ESGF. We look up standard names on high demand in ESGF search history, and using OPeNDAP and NcML technologies we aggregate the corresponding variables available in the GES DISC archive with augmented metadata required by CMIP6 and obs4MIPs Data Specification version 2.1. At this writing 10 variables from a standard product of the Atmospheric Infrared Sounder along with the Tech Notes are published in ESGF by NASA Center for Climate Simulation (NCCS). Users can view, analyze, and subset remotely, and download these aggregated variables via links in any ESGF node after searching. We plan to work on and publish more variables and data from different NASA missions and experiments in our archive.

Fan Fang↗

A Survey of Earth Observation Data Needed by U.S. Federal Agencies

The Satellite Needs Working Group (SNWG), part of the U.S. Group on Earth Observations (USGEO), surveys U.S. Federal civil agencies every two years regarding the Earth observation data they need in order to accomplish their high-priority agency objectives. The 2020 SNWG survey marked the third assessment cycle (after 2016 and 2018). Information solicited by the survey includes the nature of the need, features and phenomena being observed, data measurement characteristics, satellites and data products the agency uses or plans to use, agency satisfaction with currently available data, and limitations to agency use of satellite data. For analysis purposes, agency needs are assigned to science Focus Areas such as atmospheric composition, carbon/ecosystems, solid Earth, water, etc. Analysis of the survey responses yields insights on the current landscape of Earth observation needs across the U.S. Government agencies. The evolution over multiple survey cycles has been analyzed by the SNWG Assessment team at the Interagency Implementation and Advanced Concepts Team (IMPACT) at Marshall Space Flight Center (MSFC). Key trends emerged in the agency-agnostic analysis that can be helpful to NASA decision-makers evaluating the ongoing, evolving, and emerging needs for NASA missions and instrument datasets expressed by participating agencies in the SNWG.

Katrina Virts↗

Maine Ecological Forecasting: Using NASA Earth Observations to Assess Federally Endangered Atlantic Salmon Habitat in Maine

Atlantic salmon (Salmo salar) is a species of anadromous fish that was historically prevalent throughout the New England region. Overfishing and habitat loss caused a severe decline in the salmon population, restricting North America’s remaining wild Atlantic salmon to rivers in Maine. Land use and land cover (LULC) change and factors associated with temperature and precipitation are important for understanding the suitability of freshwater habitat for juvenile salmon. In collaboration with the Maine Department of Marine Resources and the Downeast Salmon Federation, the team utilized NASA Earth observations to aid partners in understanding how these factors change in relation to critical salmon habitat. Landsat 5 Thematic Mapper (TM) and Landsat 8 Operational Land Imager (OLI) imagery was analyzed to assess changes in LULC between 1985 and 2021. Terra Moderate Resolution Imaging Spectroradiometer (MODIS) and Integrated Multi-satellite Retrievals for Global Precipitation Measurement (GPM IMERG) data were used to determine land surface temperature and precipitation, respectively; between 2000 and 2020. Lastly, temperature and precipitation anomaly maps visualized deviation from the 20-year climatic average for each pixel. LULC analysis for 1985 to 2020 showed a loss of forest cover throughout critical salmon habitat although gains in forested area were also observed. Assessment of mean summer land surface temperature revealed an increase in temperature from 2000 to 2020 and anomaly maps highlighted areas experiencing abnormally high or low summer precipitation and temperature. These results and the underlying data were packaged for the partner organizations to inform future conservation efforts.

Michael Corley↗

Maine Ecological Forecasting II: Identifying Forest Cover and Assessing Federally Endangered Atlantic Salmon Habitat in Maine Using Earth Observations

Major declines in Atlantic salmon (Salmo salar) populations have occurred alongside dam construction, shifting temperatures, and changing land use and land cover (LULC), restricting the last remaining wild population in the United States to Maine. In collaboration with the Maine Department of Marine Resources and the Downeast Salmon Federation, the NASA DEVELOP team utilized Earth observations to assess changes within critical salmon habitat. The team used the Landsat 5 Thematic Mapper (TM), Landsat 8 Operation Land Imager (OLI), Sentinel-2 MultiSpectral Instrument (MSI), and National Land Cover Database (NLCD) to refine historical LULC maps from 1985 to 2021. The team also used elevation data from the Shuttle Radar Topography Mission (SRTM) and IDRISI TerrSet Land Change Modeler to forecast LULC change to 2040. From Terra Moderate Resolution Imaging Spectroradiometer (MODIS) land surface temperature (LST) data, the team derived a time series, summer averages, and anomaly maps between 2000 and 2021. The team analyzed LST in relation to LULC classes, specifically forest cover type, and in-situ stream temperature from the Spatial Hydro-Ecological Decision System (EcoSHEDS). LULC trends from 1985 to 2021 revealed a net transition of coniferous forest to other classes, such as deciduous forest and developed land. The team found an association between warmer temperatures and a greater presence of developed and mixed forest classes per 10,000 acres across Maine. These visualizations and analyses will aid partners in identifying riparian locations with ideal or unfavorable habitat conditions to inform Atlantic salmon population recovery efforts.

Tony Bowman↗

Feasibility Study to Interactive Workshop: Building End-user Capacity to Integrate Earth Observation Data into Federally Endangered Atlantic Salmon (Salmo salar) Habitat Monitoring in Main

Changes in temperature and precipitation patterns, along with alterations in land cover threaten ongoing conservation efforts for Federally Endangered Atlantic salmon (Salmo salar) in Maine. Earth observation data offers a unique perspective for habitat monitoring that can complement habitat restoration and conservation activity on the ground. As a dual capacity building program, the NASA DEVELOP National Program strives to build the capacity of program participants by leveraging Earth observation data to address environmental concerns across the globe, while also building capacity in partner organizations to integrate Earth observation data into their decision making practices. Between September 2021 and August 2022, three NASA DEVELOP teams demonstrated the feasibility of utilizing NASA Earth observations including Aqua Moderate Resolution Imaging Spectroradiometer (MODIS), Terra MODIS, Landsat 5 Thematic Mapper (TM), Landsat 8 Operation Land Imager (OLI), and Shuttle Radar Topography Mission (SRTM) in conjunction with Sentinel-2 MultiSpectral Instrument (MSI) to assess temperature, precipitation, and land use land cover (LULC) over time throughout salmon habitat in Maine. While the first two teams completed projects that were categorized as NASA DEVELOP’s traditional feasibility projects, the third and final project team generated resources and planned an interactive workshop to transfer project methods to end-user organizations. Ultimately, the goal of this work was to not only inform the partner’s ongoing salmon population recovery and habitat restoration initiatives but provide tools that allow partner organizations to continue integrating Earth observation data into their work beyond their partnership with the program. This project serves as a case study within the NASA DEVELOP Program and provides lessons learned for moving beyond traditional feasibility studies to more interactive partner engagement and knowledge transfer practices.

Nicole Ramberg-Pihl↗

Automated Scheduling of Federated Observations in the NOS Testbed

The advancement of remote and in-situ sensing technology, combined with the emergence of New Space ventures, is producing a variety of new measurements for Earth Science phenomena. New observation techniques must combine and leverage these federated systems. In developing this new paradigm, NASA’s Earth Science Technology Office is developing the New Observing Strategies (NOS) Testbed to validate and demonstrate new operations concepts. As a part of this effort, we have developed a planning and scheduling system to support automated retasking

Chien, Steve↗

Analyzing Federal Agency Earth Observation Needs: NASA’s 2022 Satellite Needs Working Group Assessment

Every two years, the National Aeronautics and Space Administration (NASA) leads an assessment of Federal civilian agency Earth observation needs submitted through the Satellite Needs Working Group (SNWG) survey. Nearly 30 agencies participated in the 2022 SNWG survey, submitting 115 high-priority satellite data needs that span Earth Science and represent a wide variety of potential applications for Earth observation data. Analysis of multiple SNWG survey cycles reveals trends in agency needs toward more frequent, higher resolution data that can inform agency decision-making. NASA and partners at the National Oceanic and Atmospheric Administration (NOAA) and U.S. Geological Survey (USGS) evaluated the agency surveys during an eight-month assessment period. Assessment teams comprised of subject matter experts, technology specialists, and agency managers conducted an in-depth interview with each submitting agency to fully understand the need and discuss relevant current and upcoming satellite missions. The teams then proposed over 100 potential solutions, or new activities that NASA, NOAA, and/or USGS could undertake to help meet agency needs. A few cross-cutting potential solutions that are projected to be most valuable to SNWG agencies are under consideration for implementation by NASA in the coming years.

Katrina Virts↗

Northern Rockies Ecological Conservation: Leveraging Earth Observations to Monitor and Predict Populations of Federally Threatened Whitebark Pine (Pinus albicaulis) across the Intermountain West

Whitebark pine (WBP; Pinus albicaulis) is an ecologically important species in North America. As a federally listed threatened species, an understanding of WBP habitat, distribution, and health is important for the natural resource managers of the National Park Service, United States Forest Service, Bureau of Land Management, Fish and Wildlife Service, and non-profit organizations such as the Whitebark Pine Ecosystem Foundation. Previous attempts to develop models of WBP habitat suitability and distribution lack confidence in their validity and integrity for these organizations. The updated models of habitat suitability and distribution developed by this study would provide managers with a capability to be employed in the conservation and future research direction for WBP. Thus, we developed a habitat suitability model of WBP at a high spatial resolution (Landsat 9 Operational Land Image-2, National Land Cover Database, NASA Shuttle Radar Topography Mission; 30m pixels) using a generalized logistic regression with an area under the curve value of 0.754. We extracted spectral reflectance signatures from overlapped ground sample points and Sentinel-2 Multispectral Instrument. The spectral signature analysis indicates WBP is separable from other tree species. We also utilized a visual validation approach and random forest (RF) modeling to separate WBP from limber pine. Through visual validation the RF classifier successfully identified 8out of 10 WBP trees gathered through ground truth points. Additionally, we achieved an overall accuracy of 91%in our confusion matrix for the distribution model using a dependent validation approach. The derived products from this study allow project partners to assess current suitable habitat and apparent health status in areas of identified WBP occurrence, providing data to aid future research regarding WBP health.

Sentinel-2↗

What are Federally Funded Research and Development Centers?

For nearly 70 years, federally funded research and development centers, or FFRDCs, have been vital to our nation’s growth and security. They have supported the government by developing transformational capabilities in defense, transportation, energy, civil agency administration, homeland security, atmospheric sciences, science policy, and other areas.

FFRDCs↗