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DOE OSTI2022

Electronic and Geometric effects on Photochemistry of Molecules in Well-Defined Environments

Assemblies of molecular switches at surfaces are of great interest for applications in solar energy conversion, optoelectronic and optomechanical devices. Experimental studies have demonstrated that it is possible to optically probe photoactive molecules in well-defined nanoscale environments. To understand these systems, we have developed a polarizable frozen-density embedding (FDEpol) to model the optical properties of molecules adsorbed on metal clusters. We have demonstrated that the FDEpol method can describe the ground state and linear response properties of strongly coupled systems with results that are in good agreement with exact projection based embedding method.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2022

Electron and Electron-Nuclear Dynamics of Open Quantum Subsystems

Leveraging an open-subsystem formulation of Density Functional Theory (DFT) we aim at describing periodic and molecular systems alike, including their electronic and nuclear dynamics. Subsystem DFT enables first principles simulations to approach realistic time- and length-scales, and most importantly sheds light on the dynamical behavior of complex systems. Taking subsystem DFT to the time domain allows us to inspect the electron dynamics of condensed-phase systems in real time. In liquids and interfaces, we observe all the relevant regimes proper of non-Markovian open quantum system dynamics, such as electronic energy transfer, and screening. In addition, the ab-initio modeling of system-bath interactions brought us to observe and justify the holographic time-dependent electron density theorem. Contrary to interactions between molecular (finite) systems, when molecules interact with metal or semiconductor surfaces the electron dynamics is strongly non-Markovian with dramatic repercussions to the molecule’s response to external perturbations. Metals and semiconductors typically have large polarizabilities, and even in a regime of low coupling their effect on impinging molecular species is significant–line broadening, peak shift, and intensity borrowing are observed, characterized, and explained in terms of inter-subsystem dynamical interactions and a many-body decomposition of the system’s density-density response function in a way that transcends the canons of Fermi Golden Rule.

33 ADVANCED PROPULSION SYSTEMS↗

DOE OSTI2022

Gaussian process for calibration and control of GlueX Central Drift Chamber

We have developed and implemented a machine learning based system to calibrate and control the GlueX Central Drift Chamber at Jefferson Lab, VA, in near real-time. The system monitors environmental and experimental conditions during data taking and uses those as inputs to a Gaussian process (GP) with learned prior. The GP predicts calibration constants in order to recommend a high voltage (HV) setting for the detector that maintains consistent detector performance (gain and resolution) throughout data taking. This approach is in stark contrast to traditional detector operations in which the detector operates at fixed HV and its calibration parameters vary quite considerably with time. Additionally, the ML based system utilizes uncertainty quantification to correct the recommended control parameters when appropriate. We will present results from the ML system autonomously during the Charged Pion Polarizability (CPP) experiment conducted in Hall D at Jefferson Lab.

McSpadden, Helen↗

DOE OSTI2023

Spin Structure Program at Jefferson Lab

High performance polarized beam and targets at JLab enabled an extensive program to measure nucleon spin structure functions with high precision. This talk will highlight the recent JLab spin experiments, including the measurement of the neutron spin asymmetry (A1n) in the valance quark (high-x) region and the measurement of the neutron spin moment d2 in medium-high Q2 region to study quark-gluon correlations. Recent results on spin moments at low Q2 (spin sum rules and spin polarizabilities) for both the proton and neutron will also be presented

Chen, Jian-Ping↗

DOE OSTI2025

Many-body Nuclear Dynamics

The principal goal of this work was to better understand the fusion of neutron-rich nuclei a topic relevant to the fields of both nuclear physics and nuclear astrophysics. The work provides insight into the structure and reactions of neutron-rich nuclei namely the extent of their neutron density distribution and its polarizability. By comparing the fusion excitation functions for a chain of isotopes with a common target nucleus changes in the attractive nuclear potential are assessed. This change in the attractive potential is related to changes in the neutron density distribution with increasing number of neutrons or changes in fusion dynamics with increasing neutron number. The impact of the pairing of valence neutrons and protons on the fusion cross-section is also examined. Measurement of an isotopic chain is a powerful tool to address this topic. The experimental program made use of several different accelerator facilities. The core of the experimental work involved experiments at the ReA3 accelerator and the Facility for Rare Isotope Beams (FRIB) situated at Michigan State University, at GANIL, the French national nuclear physics laboratory, and the University of Notre Dame. At ReA3 the degree to which α-clusters associated with fusion of 28,30,32 Si + 28 Si result from the collision dynamics or reflect an initial α-cluster structure was explored. Alpha clusters observed in fusion reactions exceed the predictions of the standard statistical model. This experiment provides a measure of how clusterization is impacted by the increasing neutron-richess of the system. In the experiment at GANIL we investigated fusion in 19 O + 12 C and 20 O + 12 C. This experiment utilized the recently developed active-target detector MuSIC@Indiana. Using this proven, highly efficient, active-target detector we measured the fusion excitation function for these neutron-rich systems. Grounded by these experimental measurements, theoretical models were used to examine the role of unpaired valence neutrons on the fusion cross-section at energies just above the fusion barrier.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2025

Searching for Phase Transitions in Artificial Kagome Spin Ice

Artificial Kagome spin ice is a metasurface consisting of small islands of polarizable magnets. These islands can be oriented by an external magnetic field applied in the same plane as the metasurface. By subsequently applying a relatively weaker field in the opposite direction of the initial field, a portion of the magnets in the lattice can be repolarized or “flipped” the other way. These flips cause instabilities in a previously uniformly aligned lattice, causing the system to interact with itself and induce changes in the overall magnetization of the metasurface. This Summer, my goal was to use this phenomenon to discern whether or not these systems could undergo a phase transition caused only by the initial change of the external magnetic field. Based on previous datasets that indicated that such a transition was observable, my task was to find and reproduce this potential phenomena. This process was conducted by repeating measurements on the system by using an external magnet to align the spin ice and then using Magnetic Force Microscopy (MFM) to probe the surface of the material to understand the changes in the magnetization over time. This report will discuss the characteristics of artificial Kagome spin ice, the methodology used to induce phase transitions, and the image processing methods used to understand the results. Although no reproducible evidence of a phase transition was found during the Summer, we were able to successfully reproduce short-term responses in the spin ice, as well as plot a hysteresis curve of the material.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

DOE OSTI2023

Leveraging microfluidic dielectrophoresis to distinguish compositional variations of lipopolysaccharide in E. coli

Lipopolysaccharide (LPS) is the unique feature that composes the outer leaflet of the Gram-negative bacterial cell envelope. Variations in LPS structures affect a number of physiological processes, including outer membrane permeability, antimicrobial resistance, recognition by the host immune system, biofilm formation, and interbacterial competition. Rapid characterization of LPS properties is crucial for studying the relationship between these LPS structural changes and bacterial physiology. However, current assessments of LPS structures require LPS extraction and purification followed by cumbersome proteomic analysis. This paper demonstrates one of the first high-throughput and non-invasive strategies to directly distinguish Escherichia coli with different LPS structures. Using a combination of three-dimensional insulator-based dielectrophoresis (3DiDEP) and cell tracking in a linear electrokinetics assay, we elucidate the effect of structural changes in E. coli LPS oligosaccharides on electrokinetic mobility and polarizability. We show that our platform is sufficiently sensitive to detect LPS structural variations at the molecular level. To correlate electrokinetic properties of LPS with the outer membrane permeability, we further examined effects of LPS structural variations on bacterial susceptibility to colistin, an antibiotic known to disrupt the outer membrane by targeting LPS. Our results suggest that microfluidic electrokinetic platforms employing 3DiDEP can be a useful tool for isolating and selecting bacteria based on their LPS glycoforms. Future iterations of these platforms could be leveraged for rapid profiling of pathogens based on their surface LPS structural identity.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2023

Ethane-CO2 Mixture Adsorption in Silicalite: Influence of Tortuosity and Connectivity of Pores on Selectivity

Selective adsorption using nanoporous materials is an efficient strategy for separating gas mixtures. In a nanoporous material, pores can exist in different shapes and can have different degrees of inter-connectivity. In recent studies, both pore connectivity and tortuosity have been found to affect the adsorption and dynamical properties of ethane and CO2 in silicalite differently. Here, using Monte Carlo simulations, we investigate if these two attributes can affect the selective adsorption of one component from a mixture of ethane and CO2 in silicalite. For this, the adsorption of an equimolar mixture of ethane and CO2 is simulated in 12 models of silicalite—SnZm (n, m = 0, 1, 2, 3 or 4; with n and m denoting, respectively, the fraction (out of 4) of straight and zigzag channels of silicalite that are available for adsorption)—differing in degrees of pore connectivity and tortuosity. The adsorption selectivity in this system is found to exhibit a reversal with the adsorption dominated by ethane at low pressures (below ~1 atm) and by CO2 at higher pressures (above ~10 atm). Pore connectivity is found to suppress the selective adsorption of CO2 at higher pressures and also shifts the selectivity reversal to higher pressures. The selectivity reversal results from a competition between the polarizability-affected adsorption at lower pressures and efficient packing at higher pressures. The efficient packing of CO2 is a compounded effect resulting from the larger effective pore volume available for CO2 due to its stronger interaction with the pore surface and smaller molecular volume. CO2 molecules show a preference to adsorb in non-tortuous pores, and this preference is found to be stronger in the presence of ethane. The effects of pore connectivity and tortuosity elucidated here should be applicable to a wide range of natural and engineered nanoporous materials, and this knowledge could be used to identify materials with better capability for separating and storing CO2 based on their pore attributes.

Gautam, Siddharth (ORCID:0000000314435382)↗

DOE OSTI2025

Uncovering Structure–Conductivity Relationships in Anion Exchange Membranes (AEMs) Using Interpretable Machine Learning

Anion exchange membranes (AEMs) play a vital role in the performance of water electrolyzers and fuel cells, yet their discovery and optimization remain challenging due to the complexity of structure–property relationships. In this study, we introduce a machine learning framework that leverages conditional graph neural networks (cGNNs) and descriptor-based models and a hybrid graph neural network (HGARE) to predict and interpret ionic conductivity. The descriptor-based pipeline employs principal component analysis (PCA), ablation, and SHAP analysis to identify factors governing anion conductivity, revealing electronic, topological, and compositional descriptors as key contributors. Beyond prediction, dimensionality reduction and clustering are performed by employing t-SNE and KMeans as well as SOM, which reveal distinct membranes clusters, some of which were enriched with high anion conductivity. Among graph-based approaches, the graph convolutional (GCN) achieved strong predictive performance, while the Hybrid Graph Autoencoder-Regressor Ensemble (HGARE) achieved the highest accuracy. Additionally, atom-level saliency maps from GCN provide spatial explanations for conductive behavior, revealing the importance of polarizable and flexible regions. This work contributes to the accelerated and data-driven design of high-performance AEMs.

Naghshnejad, Pegah [Department of Chemical Enginee↗

DOE OSTI2024

How Aqueous Solvation Impacts the Frequencies and Intensities of Infrared Absorption Bands in Flavin: The Quest for a Suitable Solvent Model

FTIR spectroscopy accompanied by quantum chemical simulations can reveal important information about molecular structure and intermolecular interactions in the condensed phase. Simulations typically account for the solvent either through cluster quantum mechanical (QM) models, polarizable continuum models (PCM), or hybrid quantum mechanical/molecular mechanical (QM/MM) models. Recently, we studied the effect of aqueous solvent interactions on the vibrational frequencies of lumiflavin, a minimal flavin model, using cluster QM and PCM models. Those models successfully reproduced the relative frequencies of four prominent stretching modes of flavin’s isoalloxazine ring in the diagnostic 1450–1750 cm−1 range but poorly reproduced the relative band intensities. Here, we extend our studies on this system and account for solvation through a series of increasingly sophisticated models. Only by combining elements of QM clusters, QM/MM, and PCM approaches do we obtain an improved agreement with the experiment. The study sheds light more generally on factors that can impact the computed frequencies and intensities of IR bands in solution.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2022

Contributions to Dielectric Constant Enhancement in Thin Film Metal Insulator Metal Capacitors

Thin film metal-insulator-metal capacitors were fabricated with varying dielectric and electrode thicknesses and areas. Measurement of the dielectric properties of the capacitors consistently yielded higher than predicted capacitance values, which prompted the exploration of three factors that could enhance the capacitance. Modeling of the fringing capacitance and field enhancement due to the capacitor geometry, both yield capacitance gains, albeit insufficient to fully explain the observed behavior. The possible role of changes in polarizability of the dielectric film constituents, due to the amorphous nature of the films was also evaluated, but the results of the investigation of this contribution were inconclusive. Herein, the role of accumulation/depletion layers on capacitance enhancement was also analyzed. For capacitors fabricated with thinner dielectrics, the presence of these layers can effectively reduce the dielectric thickness, resulting in contributions to capacitance that are significant. The calculations completed suggest these contributions may be more important than fringing field contributions. Additional studies of these mechanisms are in progress.

36 MATERIALS SCIENCE↗

DOE OSTI2024

Desorption lifetimes and activation energies influencing gas–surface interactions and multiphase chemical kinetics

Abstract. Adsorption and desorption of gases on liquid or solid substrates are involved in multiphase processes and heterogeneous chemical reactions. The desorption energy (Edes0), which depends on the intermolecular forces between adsorbate and substrate, determines the residence time of chemical species at interfaces. We show how Edes0 and temperature influence the net uptake or release of gas species, the rates of surface–bulk exchange and surface or bulk reactions, and the equilibration timescales of gas–particle partitioning. Using literature data, we derive a parameterization to estimate Edes0 for a wide range of chemical species based on the molecular mass, polarizability, and oxygen-to-carbon ratio of the desorbing species independent of substrate-specific properties, which is possible because of the dominant role of the desorbing species' properties. Correlations between Edes0 and the enthalpies of vaporization and solvation are rooted in molecular interactions. The relation between Edes0 and desorption kinetics reflects the key role of interfacial exchange in multiphase processes. For small molecules and semi-volatile organics (VOC, IVOC, SVOC), Edes0 values around 10–100 kJ mol−1 correspond to desorption lifetimes around nanoseconds to days at room temperature. Even higher values up to years are obtained at low temperatures and for low volatile organic compounds (LVOC, ELVOC/ULVOC) relevant for secondary organic aerosols (SOA). Implications are discussed for SOA formation, gas–particle partitioning, organic phase changes, and indoor surface chemistry. We expect these insights to advance the mechanistic and kinetic understanding of multiphase processes in atmospheric and environmental physical chemistry, aerosol science, materials science, and chemical engineering.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Improving scalability of electronic structure code for molecular simulations in the presence of environment

A scalable density functional electronic code with Gaussian basis set, called UTEP-NRLMOL, is developed to perform simulations of molecular systems in the presence of the environment with particular attention to the memory requirements. In the electronic structure calculations, the memory and computation time are proportional to the number of atoms. Memory requirements for density functional calculations scale as N*N, where N is the number of atoms. While the recent advances in HPC offer platforms with large numbers of cores, the limited amount of memory available on a given node and poor scalability of the electronic structure codes hinder their efficient usage of these platforms. We have introduced new scaling and parallelization paradigms using MPI-3 shared-memory functionality combined with usage of sparse algebra and storage of matrices in sparse format. This extends the range of applicability of the UTEP-NRLMOL code to large systems over 10,000 atoms, or using up to 67,000 basis functions, and making use of HPC architectures using over 6,000 processors utilizing all available cores. We have also interfaced code with effective fragment potential and polarizable continuum model libraries. The code was used in simulations of several applications which are published in reputed scientific journals.

74 ATOMIC AND MOLECULAR PHYSICS↗

DOE OSTI2021

Neutron Skin Measurement of208Pb Using Parity-Violating Electron Scattering

Nuclear stability requires large nuclei to have more neutrons than protons. While the central core of the nucleus is composed of symmetric nuclear matter, the extra neutrons in heavy nuclei are pushed out to the surface of the nucleus, forming a pure outer neutron skin layer. While the proton distribution inside a nucleus has been accurately measured using electromagnetic probes, previous measurements of neutron distributions in complex nuclei have suffered a lack of systematic precision. PREX-2 and CREX use Parity-Violating electron Scattering (PVeS), as an electroweak interaction probe, to measure the neutron distributions in208Pb and48Ca, respectively. Making use of elastic scattering of longitudinally polarized electrons from unpolarized (isotopically pure) targets, PREX-2 and CREX measure the asymmetry in scattering rates between opposite beam polarization states. Since both experiments share the same exact measurement concept and apparatus, much of this dissertation applies to both PREX-2 and CREX. However, the presented asymmetry analysis and neutron skin extraction are only for PREX-2. PREX-2 measures the parity-violating asymmetry, APV, for 953 MeV electrons scattered elastically from208Pb at?5°in the lab. The final result is APV= 550.00±16.09(stat.)±8.16(syst.)ppb. From this measurement, we report the neutron skin thickness in208Pb nuclei to be, Rskin= 0.278±0.078(exp.)±0.012(model) fm. This measurement has broad implications throughout the physics community, increasing our knowledge in neutron star structure, the equation of state of nuclear matter, nuclear baryon density, nuclear electric dipole polarizability, and more. Key Words: Neutron skin, electroweak interaction, PREX-2, CREX, parity-violating asymmetry, neutron star, quartz detector, weak charge radius, symmetry energy, Hall A, Jefferson Lab

Adhikari, Devi↗

DOE OSTI2021

Specialized diamond materials for NMR applications

Polarizable diamond materials and methods for obtaining nuclear magnetic resonance spectra of samples external to the diamond materials are described. The diamond materials can include 12C, 13C, substitutional nitrogen, and nitrogen vacancy defects in a crystalline lattice, wherein the substitutional nitrogen concentration is between 10 ppm and 200 ppm, the nitrogen vacancy concentration is between 10 ppb and 10 ppm, and the 13C concentration is greater than 1.1% and not more than 25%. Methods for obtaining nuclear magnetic resonance spectra can include optically pumping a diamond material to generate electron spin hyperpolarization in nitrogen vacancy centers, transferring the electron spin hyperpolarization to nuclei of the sample, and generating a nuclear magnetic resonance spectrum by applying a magnetic field to the sample, exciting the sample with a radio frequency pulse, and detecting a nuclear magnetic resonance response from the sample.

Parker, Alfred↗

DOE OSTI2022

CO2 Sorption in Ionic Liquid Crystals

Ionic liquid crystals (ILCs) have an affinity for certain polarizable gases such as CO2, due to their similarity to ionic liquids. We investigated three ILCs in the [1-alkyl-3-methylimidazolium+] family: n=12,14 with [BF4-] and [PF6-]: liquid crystalline analogues to ionic liquids with moderate (e.g., 1-2 mol%) CO2 solubility at atmospheric conditions: [1-butyl-3-methylimidazolium+] with [BF4-] and [PF6-]. While ionic liquids show high CO2 solubility, regenerating the CO2 is a high-energy process. Liquid crystals show low CO2 solubility but have a much lower regeneration energy requirement. Will ionic liquid crystals uptake CO2? What are the energy requirements of regenerating CO2? Conclusions: 1. C12mim BF4- shows the highest sorption at 0.12 wt% CO2 in the isotropic phase vs. C14mim BF4- with 0.097 wt% in the smectic phase. We hypothesize that the increase in chain length affects the free volume of the smectic vs. isotropic phase of C14mim BF4-, increasing the latter. 2. The change in anion from BF4- to PF6- decreased the sorption to an insignificant level more analogous to a physical adsorption onto the material in all phases. We hypothesize that the change in anion to the larger, less charge dense PF6- decreased the attractive forces between CO2 and the anion. 3. 0.12 wt% of CO2 in C12mim BF4- is small but significant. This in combination with the room temperature release of CO2 after only requiring refrigeration temperatures to occlude the CO2, making ionic liquid crystals promising materials for future.

carbon dioxide sorption↗

DOE OSTI2022

Extraction of Deep Inelastic Cross Sections Using a 10.4 GeV Electron Beam and a Polarized Helium-3 Target

Experiment E12-06-121 at Jefferson Lab aims to do a precision measurement of the neutron spin structure function g2 using inclusive inelastic scattering of electrons over a large kinematic range of x and Q2. The third moment of the linear combination of the spin structure functions g1 and g2, d2, is one of the cleanest higher twist observables and contains information on quark-gluon correlations. It is connected to the \color polarizability or \color Lorentz force" of the nucleon. The experimental data taking was successfully conducted in Hall C using a longitudinally polarized electron beam with 10.4 GeV energy, and a polarized 3He gas target. The combination of the Super High Momentum Spectrometer (SHMS) and the High Momentum Spectrometer (HMS) allowed us to run the experiment for three constant Q2 values (3.0, 4.3, and 5.6 GeV2/c2) over a wide range of x (0:20 < x < 0:95) for the ?first time. To extract the neutron spin structure functions, precision determination of the unpolarized cross-sections and double spin asymmetries are required. The analysis of the deep inelastic scattering data and the results from the ?first measurements of unpolarized 3He cross-sections are reported in this work. The extracted cross-sections will be combined with the electron asymmetry results (ongoing work) to obtain the g2 and d2 of 3He. Finally, nuclear correction to the 3He results will have to be applied to extract g2 and d2 for the neutrons.

Roy, Murchhana↗

DOE OSTI2022

Gaussian process for calibration and control of GlueX Central Drift Chamber

McSpadden, Helen↗