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DOE OSTI2025

Intestinal microbiome profile of the brown rock sea cucumber ( Holothuria glaberrima ) using ITS and 16S rDNA amplicons from direct mechanical, enzymatic, and chemical metagenomic extraction

Using direct mechanical, enzymatic, and chemical extraction methods, the intestinal microbiome of the marine invertebrate Holothuria glaberrima was obtained. ITS and 16S rDNA regions were sequenced to enrich and investigate the prokaryotic and fungal diversity profiles from different anatomical regions within the sea cucumber’s intestinal biology.

16S↗

DOE OSTI2025

Characterization of intestinal fungal communities through ITS amplicon from metagenomic libraries of sea cucumber ( Holothuria glaberrima )

The brown rock sea cucumber (Holothuria glaberrima) microbiome is vital for understanding its ecological dynamics. This study focuses on the microbial composition and abundance of fungi across different intestinal regions of H. glaberrima, giving insights into host-microbe interactions and supporting future ecological and comparative studies on their regeneration capabilities.

16S↗

DOE OSTI2025

Forecasting for ESCAPE: A Multi-Institution Hybrid Forecasting and Nowcasting Operation for Sea-Breeze Convection Supporting a Ground-Based and Airborne Field Campaign

The Experiment of Sea-Breeze Convection, Aerosols, Precipitation and Environment (ESCAPE) field project deployed two aircraft and ground-based assets in the vicinity of Houston, Texas, between 27 May and 2 July 2022, examining how meteorological conditions, dynamics, and aerosols control the initiation, early growth stage, and evolution of coastal convective clouds. To ensure that airborne- and ground-based assets were deployed appropriately, a forecasting and nowcasting team was formed. Daily forecasts guided real-time decision-making by assessing synoptic weather conditions, environmental aerosol, and a variety of atmospheric modeling data to assign a probability for meeting specific ESCAPE campaign objectives. During the research flights, a small team of forecasters provided “nowcasting” support by analyzing radar, satellite, and new model data in real time. The nowcasting team proved invaluable to the campaign operation, as sometimes changing environmental conditions affected, for example, the timing of convective initiation. In addition to the success of the forecasting and nowcasting teams, the ESCAPE campaign offered a unique “testbed” opportunity where in-person and virtual support both contributed to campaign objectives. The forecasting and nowcasting teams were each composed of new and experienced forecasters alike, where new forecasters were given invaluable experience that would otherwise be difficult to attain. Both teams received training on forecast models, map analysis, Hybrid Single-Particle Lagrangian Integrated Trajectory model (HYSPLIT), and thermodynamic sounding analysis before the beginning of the campaign. In this article, the ESCAPE forecasting and nowcasting teams reflect on these experiences, providing potentially useful advice for future field campaigns requiring forecasting and nowcasting support in a hybrid virtual/in-person framework.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2020

Sea Level Rise in the CESM Large Ensemble: The Role of Individual Climate Forcings and Consequences for the Coming Decades

The emergence of a spatial pattern in the externally forced response (FR) of dynamic sea level (DSL) during the altimeter era has recently been demonstrated using climate models but our understanding of its initial emergence, drivers, and implications for the future is poor. Here the anthropogenic forcings of the DSL pattern are explored using the Community Earth System Model Large Ensemble (CESM-LE) and Single-Forcing Large Ensemble, a newly available set of simulations where values of individual forcing agents remain fixed at 1920 levels, allowing for an estimation of their effects. Statistically significant contributions to the DSL FR are identified for greenhouse gases (GHGs) and industrial aerosols (AERs), with particularly strong contributions resulting from AERs in the mid-twentieth century and GHGs in the late twentieth and twenty-first century. Secondary, but important, contributions are identified for biomass burning aerosols in the equatorial Atlantic Ocean in the mid-twentieth century, and for stratospheric ozone in the Southern Ocean during the late twentieth century. Key to understanding regional DSL patterns are ocean heat content and salinity anomalies, which are driven by surface heat and freshwater fluxes, ocean dynamics, and the spatial structure of seawater thermal expansivity. Finally, potential implications for the interpretation of DSL during the satellite era and the longer records from tide gauges are suggested as a topic for future research.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

CODAS Data from Oliktok Point, Beaufort Sea, Alaska

Cryosphere/Ocean Distributed Acoustic Sensing (CODAS) data collected from the Beaufort Sea, Alaska, using ~37.4 km of dark telecommunications fiber located at Oliktok Point, Alaska. Data were collected with a Silixa iDAS, using 10 m gauge length, 2 m spatial resolution, and 1000 Hz sample rate. Provided here are the DAS-recorded time series for the rapid refreeze event described in Baker & Abbott (2022) (see link below). This covers a date range of 2021-11-10 15:00 UTC to 2021-11-11 17:00 UTC. Data have been decimated to 100 Hz and 20 m (i.e., every 10th channel for 1831 channels, total), as used in Baker & Abbott (2022). Data have been extracted from raw format into 1-hour long .sac* files and organized into directories by channel number, spanning channels 100 to 18400. Time series units are nano-strainrate (nm/m/s). For distribution, data have been compressed into .zip files containing all time series files for 100 channels. *For information on the Seismic Analysis Code (SAC) file format: https://seiscode.iris.washington.edu/projects/sac

16 TIDAL AND WAVE POWER↗

DOE OSTI2023

Iron at the Air-Sea Interface (Final Report)

Workshop: Seventy-four scientists from twenty-three countries registered to participate and to present their experimental, modeling, and remote sensing studies related to atmospheric supply and speciation of aerosol iron (Fe), its contribution to the dissolved Fe inventory of the ocean, and its potential impacts on primary production and CO 2 uptake. Due to travel restrictions related to the ongoing pandemic, the meeting was conducted in a hybrid mode. The in-person portion of the meeting was held in Asheville, North Carolina and the online participants were able to join using two streaming platforms. The objective of this workshop was to address the most urgent open science questions for improved quantification of Fe at the air-sea interface. Iron is required for the growth of phytoplankton. The availability of iron can limit the growth of phytoplankton and thus the overall productivity of the marine ecosystem. Therefore, the atmospheric supply of iron to the surface oceans may play a key role in regulating biological productivity, atmospheric carbon dioxide (CO 2 ) concentrations, and possibly climate.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Quality Assurance Project Plan for the Salish Sea Model – Continuing Development of New Capabilities and Applications: European Green Crab (EGC) Larval Transport, Coupling to VELMA and Atlantis, Performance Improvements and Diagnostic Applications

This quality assurance project plan (QAPP) is for proposed FY24-FY27 efforts to (a) develop/expand a predictive European Green Crab (EGC) larval dispersal model for the Salish Sea, (b) add linkage between VELMA (Visualizing Ecosystem Land Management Assessments) watershed model and Atlantis model (ecosystem dynamics and food web) through SSM, and (c) continue SSM capability development through the addition of metals, harmful algal blooms (HABs), and FVCOM-LTRANS (Lagrangian Larval Transport) modules.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Potential Activities and Long Lifetimes of Organic Carbon-Degrading Extracellular Enzymes in Deep Subsurface Sediments of the Baltic Sea

Heterotrophic microorganisms in marine sediments produce extracellular enzymes to hydrolyze organic macromolecules, so their products can be transported inside the cell and used for energy and growth. Therefore, extracellular enzymes may mediate the fate of organic carbon in sediments. The Baltic Sea Basin is a primarily depositional environment with high potential for organic matter preservation. The potential activities of multiple organic carbon-degrading enzymes were measured in samples obtained by the International Ocean Discovery Program Expedition 347 from the Little Belt Strait, Denmark, core M0059C. Potential maximum hydrolysis rates (V max ) were measured at depths down to 77.9mbsf for the following enzymes: alkaline phosphatase, β- d -xylosidase, β- d -cellobiohydrolase, N-acetyl-β- d -glucosaminidase, β-glucosidase, α-glucosidase, leucyl aminopeptidase, arginyl aminopeptidase, prolyl aminopeptidase, gingipain, and clostripain. Extracellular peptidase activities were detectable at depths shallower than 54.95mbsf, and alkaline phosphatase activity was detectable throughout the core, albeit against a relatively high activity in autoclaved sediments. β-glucosidase activities were detected above 30mbsf; however, activities of other glycosyl hydrolases (β-xylosidase, β-cellobiohydrolase, N-acetyl-β-glucosaminidase, and α-glucosidase) were generally indistinguishable from zero at all depths. These extracellular enzymes appear to be extremely stable: Among all enzymes, a median of 51.3% of enzyme activity was retained after autoclaving for an hour. We show that enzyme turnover times scale with the inverse of community metabolic rates, such that enzyme lifetimes in subsurface sediments, in which metabolic rates are very slow, are likely to be extraordinarily long. A back-of-the-envelope calculation suggests enzyme lifetimes are, at minimum, on the order of 230days, and may be substantially longer. These results lend empirical support to the hypothesis that a population of subsurface microbes persist by using extracellular enzymes to slowly metabolize old, highly degraded organic carbon.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Prototyping of a Rotary Triboelectric Nanogenerator for Power at Sea

Increasing at-sea power generation by Triboelectric Nanogenerator (TENG) energy harvesters towards the order of 1-Watt will create significant opportunities to power ocean observation buoys and distributed sensor nodes by extending mission time and increasing sensor payload. Of the many possible configurations of harvesting wave energy with TENGs, we document the rationale for choosing and developing a rotary TENG that operates by the freestanding mode. The rotary TENG prototype consists of two plates, a rotor and a stator, to take advantage of the various mechanisms of converting wave action into rotational motion. We have constructed a testing apparatus that allows us to vary several key parameters of the device: distance between rotor and stator, triboelectric material, rotational speed, number of electrodes and output load impedance. Preliminary results show that when driven at a constant 500 rpm, we can achieve a power density of 0.7 W/m3. A variable speed motor drives the rotor, which can be driven using a velocity profile informed by the equivalent to the output from a wave energy converter (WEC). The optimized rotational TENG can be stacked and driven by a single shaft, increasing the energy density of the device. The output of such a TENG could be used to power devices in the ocean at a low cost and high durability.

electrostatic generator↗

DOE OSTI2022

Analysis of short‐ and long‐term system response during gas production from a gas hydrate deposit at the UBGH2‐6 site of the Ulleung Basin in the Korean East Sea

Abstract This study is a continuation of an investigation into the feasibility of long‐term production from a marine hydrate accumulation that has the properties and conditions of the UBGH2‐6 (UBGH2, Ulleung Basin Gas Hydrates 2; 2 is the number of the scientific expedition) site at the Ulleung Basin in the Korean East Sea. The 12.7 m‐thick system is in deep water (2157 m), but at 140 m below the seafloor. It is characterized by alternating hydrate‐free clays and muds and hydrate‐rich sand layers. The layered stratigraphy and the presence of mud layers favours the use of vertical wells rather than horizontal wells for production. The analysis indicates that production from such a hydrate accumulation is technically feasible, but the gas production rates are generally low. Water production accompanying gas production from this deposit appears manageable under all the scenarios investigated in this study, however, the water‐to‐gas ratio is high. Subsidence at the ocean floor at the end of a 14 day test is quite limited. However, there is significant uncertainty in the predictions of the geomechanical system's behaviour because they are not based on measured system properties but only on estimates/assumptions from analogues. The long‐term production potential of the reservoir at the site investigated here appears challenging because of the limited effectiveness of dissociation and large water production, in addition to substantial subsidence.

Moridis, George J.↗

DOE OSTI2023

Revisiting the equatorial Pacific sea surface temperature response to global warming

The relative roles of the oceanic and atmospheric processes in the pattern formation of the equatorial Pacific sea surface temperature (SST) response to global warming is investigated using a set of climate model experiments embedded with a novel partial coupling technique. Here, the modeling results show that the SST response experiences a transition from a La Niña-like warming pattern at the initial stage to an El Niño-like warming pattern at the quasi-equilibrium stage. By decomposing anomalous equatorial Pacific SST into atmosphere-forced passive component and ocean dynamics-induced active component, it is found that the SST warming pattern at both stages is entirely induced by its active component. Specifically, the meridional and vertical ocean circulation changes play a dominant role in forming the La Niña-like SST warming pattern at the initial stage, and the zonal and meridional ocean circulation changes are responsible for the formation of the El Niño-like SST warming pattern at the quasi-equilibrium stage. In contrast, the passive SST at both stages is characterized by a zonally uniform warming along the equator, which can be explained by a balance between the cooling effect associated with mean upwelling and the warming effect due to surface passive heat flux change. In addition, this study finds that it is the slowdown of the Pacific subtropical cells during the transition period that controls the evolution of the equatorial SST warming pattern by changing the meridional and vertical ocean heat transports.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Experimentally simulated sea level rise destabilizes carbon-mineral associations in temperate tidal marsh soil

How sea level rise (SLR) alters carbon (C) dynamics in tidal salt marsh soils is unresolved. Changes in hydrodynamics could influence organo-mineral associations, influencing dissolved organic carbon (DOC) fluxes. As SLR increases the duration of inundation, we hypothesize that lateral DOC export will increase due to reductive dissolution of C-bearing iron (Fe) oxides, destabilizing soil C stocks and influencing greenhouse gas emissions. To test this, soil cores (0–8 cm depth) were collected from the high marsh of a temperate salt marsh that currently experiences changes in water level and soil redox oscillation due to spring-neap tides. Mesocosms experimentally simulated SLR by continuously inundating high marsh soils and were compared to mesocosms with Control conditions, where the water level oscillated on a spring-neap cycle. Porewater DOC, lateral DOC, and porewater reduced Fe (Fe 2+ ) concentrations were significantly higher in SLR treatments (1.7 ± 0.5 mM, 0.63 ± 0.14 mM, and 0.15 ± 0.11 mM, respectively) than Control treatments (1.2 ± 0.35 mM, 0.56 ± 0.15 mM, and 0.08 ± 01 mM, respectively Solid phase analysis with Fe extended X-ray absorption fine-structure spectroscopy further revealed that SLR led to > 3 times less Fe oxide-C coprecipitates than Control conditions In addition, the overall global warming potential (GWP) decreased under SLR due to suppressed CO 2 emissions. Our data suggest that SLR may increase lateral C export of current C stocks by dissolving C-bearing Fe oxides but decrease the overall GWP from emissions of soil trace gases. Finally, these findings have implications for understanding the fate of SOC dynamics under future SLR scenarios.

dissolved organic carbon↗

DOE OSTI2026

Seasonal variation of the surface cross-shelf exchange in the northern South China Sea: a Lagrangian perspective

Previous studies on cross-shelf exchange, predominantly adopted an Eulerian perspective, struggled to identify water sources and pathways. Using a high-resolution regional ocean modeling system (ROMS) and Lagrangian particle tracking, this study systematically investigates the seasonal variation and dynamics of surface cross-shelf exchange in the northern South China Sea (NSCS) from a Lagrangian perspective. Based on daily released 30-day drifter trajectories we identify the key pathways, source regions for surface cross-shelf exchange, revealing pronounced seasonal variability. Results show the surface cross-shelf exchange generally following monsoon-driven Ekman transport. However, local dynamics, especially topographic modulation, can outweigh the expected Ekman-driven transport, producing surface exchange patterns opposite to that predicted from the prevailing winds. Topographic effects vary across different scales. In the coastal waters of western Guangdong during winter, despite downwelling-favorable winds, the modulation of alongshore currents by island topography induces an eastward pressure gradient. This gradient, through geostrophic balance, drives offshore flows opposite to wind-driven Ekman onshore transport. Furthermore, the eastern widened shelf exhibits a distinct seasonal variation of cross-shelf exchange, with strong offshore transport (opposite to the direction of Ekman transport) in winter and exceedingly weak exchange in summer. Analysis of the underlying mechanisms reveals that this winter offshore transport is primarily attributed to geostrophic flows driven by surface pressure gradient that is jointly modulated by the Kuroshio intrusion and local widened shelf topography, and enhanced by cumulative submesoscale processes. In summer, a persistent and strong along-isobath jet acts as a dynamic barrier, effectively suppressing the exchange. These findings highlight the important role of topography in regulating surface material transport, and have important implications for predicting the advection and dispersion of plankton or oil spills over the continental shelf influenced by monsoon.

Hao, Dongliang↗

DOE OSTI2025

Analysis of contrasting aerosol indirect effects in liquid water clouds over the northern part of Arabian Sea

The extensive daily statistics of aerosol properties, cloud properties, and their mutual correlations provide crucial information for better assessing future climate change. Here, in this paper, 14 years (2010–2023) of data from the Moderate Resolution Imaging Spectroradiometer (MODIS) are analyzed over the northern part of Arabian Sea (Latitude: 21°–25° N and Longitude: 62°–68° E) to assess the characteristics of aerosols and clouds and their relationships under different meteorological conditions. When aerosol optical depth (AOD) is less than ~0.7, the observations exhibit a positive correlation between AOD and cloud droplet effective radius (CDR) but negative correlations between AOD and cloud droplet number concentration (CDNC), between AOD and cloud optical depth (COD), between AOD and cloud liquid water path (CLWP), and between AOD and cloud geometrical thickness (H). The corresponding aerosol-cloud correlations change signs when the AOD values are larger than 0.7. However, the single folded positive AOD-cloud fraction (CF) relationship is observed in both AOD regimes. Similar correlations are also observed between precipitable water vapor (PWV) and CDR, CDNC, COD, H, CF and CLWP, together with a positive correlation between PWV and AOD. Further isolation of the environmental effects from aerosol effects by stratifying AOD and cloud data into different LTS and PWV bins shows that the signature of the well-known Twomey effect is observed under high LTS-high PWV conditions, while an opposite effect (anti-Twomey) is observed under low PWV conditions, regardless of LTS values. Additionally, negative correlations between AOD and COD, AOD and CLWP, and AOD and H are observed under low LTS, regardless of PWV conditions, with a slight positive correlation when AOD >0.4 under high LTS and PWV conditions.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Reactions of self-healing agents and the chemical binding of aggressive ions in sea water: Thermodynamics and kinetics

New self-healing agents that can chemically bind seawater ions invading cracked cementitious materials were proposed. The potential of self-healing and binding of seawater ions were investigated by thermodynamic modeling. It was found that CaO-NaAlO{sub 2} and CaO-metakaolin agents can have Cl{sup −}, SO{sub 4}{sup 2−} and Mg{sup 2+} chemically bound by reacting with sea water to form Friedel's salt, Kuzel's salt, ettringite and hydrotalcite. The removal of Cl{sup −} from seawater firstly increased and then decreased with the increase of Ca/Al molar ratio in both agents, while the removal of Mg{sup 2+} and SO{sub 4}{sup 2−} were hardly influenced and approximated 100%. Because NaAlO{sub 2} dissolves and releases Al(OH){sub 4}{sup −} rapidly, precipitates binding Cl{sup −}, SO{sub 4}{sup 2−} and Mg{sup 2+} were formed fast. In comparison, the reaction of metakaolin binding aggressive ions occurred after 3 days. Because of the faster reaction and the capacity to make [Cl{sup −}]/[OH{sup −}] lower in the solution, CaO-NaAlO{sub 2} would be more efficient for self-healing and mitigating reinforcement corrossion than CaO-metakaolin.

36 MATERIALS SCIENCE↗

DOE OSTI2024

Sea-level rise and arsenic-rich soils: A toxic relationship

In the United States, dangerously high arsenic (As) levels have been found in drinking water wells in more than 25 states, potentially exposing 2.1 million people to drinking water high in As; a known carcinogen. The anticipated sea-level rise (SLR) is expected to alter soil biogeochemical and hydrological conditions, potentially impacting their ability to sequester As. In our study of coastal Wilmington, DE, an area projected to experience a 1-meter SLR by 2100, we examined the spatial distribution, speciation, and release possibilities of As due to SLR. To understand the complex dynamics at play, we employed a comprehensive approach, including bulk and micro X-ray absorption spectroscopy measurements, hydrological pattern evaluation, and macroscopic stirred-flow experiments. Further, our results suggest that introducing reducing and saline conditions can increase As release in both river water and seawater inundation scenarios, most likely due to ionic competition and the dissolution of As-bearing Fe/Mn oxides. Regardless of the salinity source, the released As concentrations consistently exceeded the EPA threshold for drinking water. Our results provide valuable insights for developing appropriate remedial and management strategies for this site and numerous others facing similar environmental challenges.

36 MATERIALS SCIENCE↗

DOE OSTI2020

Vertical effective stress and temperature as controls of quartz cementation in sandstones: Evidence from North Sea Fulmar and Gulf of Mexico Wilcox sandstones

Here we present quantitative petrographic data, high spatial resolution oxygen isotope analyses of quartz cement, basin modelling and a kinetic model for quartz precipitation for two Paleocene-Eocene Wilcox Group sandstones from Texas and two Jurassic Fulmar Formation sandstones from the Central North Sea. At each location, one sandstone has been buried to ca. 145 °C and one to ca. 185 °C. A key difference between the Wilcox and Fulmar burial histories is that the Wilcox sandstones are currently at higher vertical effective stresses and, from basin modelling studies, have been subjected to generally higher vertical effective stresses through their burial history. The amounts of quartz cement in the Wilcox sandstones are between 12 and 18%, and between 2 and 6% in the Fulmar sandstones. High-spatial-resolution oxygen isotope data obtained from the quartz cements suggest temperature ranges for quartz precipitation from 60 to 80 °C to values approaching maximum burial temperature. Factors such as grain coatings or the timing of petroleum emplacement cannot explain the differences in the amounts of quartz cement. Petrographic data show that most of the silica for quartz cement can be derived from intergranular pressure dissolution. Although the sample set is small, we interpret the results to suggest that the differences in quartz cementation in Fulmar and Wilcox sandstones can be explained better by differences in their vertical effective stress history than their temperature history; in this case, the supply of silica rather than the precipitation of quartz becomes an important control on the rate and extent of cementation.

58 GEOSCIENCES↗

DOE OSTI2022

Magnetically recyclable nanocomposites via lanthanide-based MOFs grown on natural sea sponge: Screening hydrogenation of nitrophenol to aminophenol

Catalysts have played a significant role in chemical industries and received significant attention as a result. Unfortunately, many common catalytic systems are comprised of a small number of elemental species or use similar synthetic strategies, which potentially limit innovation in areas such as the discovery of new transformations. Metal-organic frameworks (MOFs) have been established as versatile materials employed in various applications that include catalysis; however, the majority of MOFs have been synthesized using transition metal building blocks, possibly hindering advances towards innovative materials with unique properties. Here this work reports the synthesis of MOFs based on lanthanide elements (Ln = Ce, Gd, La, and Sm), which demonstrate great potential yet are often overlooked. The Ln-based MOFs were grown in situ on natural sea sponge supports and Fe ion containing solution, followed by a thermal carbonization treatment to generate FeLn metal nanoparticles (NPs) embedded on carbon support (FeLn@C). These nanostructured products exhibited good crystallinity and well-confined particle sizes. We then demonstrate that these hybrid materials can be used as effective heterogeneous nanocatalysts for the hydrogenation of nitrophenol to aminophenol in aqueous media. Besides, FeLn@C catalysts had a magnetic property due to Fe atoms in the NPs, which can be mechanically separated out from the aqueous solution since the catalysts are magnetically attracted to the external magnets. This magnetic recyclability combined with the usage of the natural materials highlight the importance of sustainability in the design of Ln-based MOFs and their catalytic applications.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗