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At least 343 records · Page 19

150 Shades of Green: Using the Full Spectrum of Remote Sensing Reflectance to Elucidate Color Shifts in the Ocean

This article proposes a simple and intuitive classification system by which to define full spectral remote sensing reflectance (Rrs(λ)) data with a quantitative output that enables a more manageable handling of spectral information for aquatic science applications. The weighted harmonic mean of the Rrs(λ) wavelengths outputs an Apparent Visible Wavelength (in units of nanometers), representing a one-dimensional geophysical metric of color that is inherently correlated to spectral shape. This dimensionality reduction of spectral information combined with the output along a continuum of wavelength values offers a robust and user-friendly means to describe and analyze spectral Rrs(λ) in terms of spatial and temporal trends and variability. The uncertainty in the algorithm's estimation of spectral shape is demonstrated on a global scale, in addition to the utility of the algorithm to discern spectral-spatial-temporal trends in the ocean, on a per-pixel basis for the entire 22 year continuous ocean color (SeaWiFS and MODIS-Aqua) time-series. This technique can be applied to datasets of varying multi- and hyper-spectral resolutions, providing continuity between heritage and future satellite sensors, and further enabling an effective means of elucidating similarities or differences in complex spectral signatures within the constraints of two dimensions. This straightforward means of conceptualizing multi-dimensional variability can help maximize the potential of the spectral information embedded in remote sensing data.

ocean color↗

Supporting Aquaculture in the Chesapeake Bay Using Artificial Intelligence to Detect Poor Water Quality with Remote Sensing

Reliable information on water quality is not currently available at the space and time scales that are required for aquaculture and other resource management needs. For example, shellfish growing areas maybe impacted by harmful algal blooms or runoff from land that increases turbidity, lowers salinity, or introduces contaminants. Shellfish resource managers in the Chesapeake Bay are especially concerned with sources of bacteria from land such as failing onsite waste systems, failing wastewater infrastructure, and concentrated animal feeding operations. There is an urgent need for remote sensing of water quality indicators beyond chlorophyll-a and suspended sediments to augment field sampling programs. Artificial Intelligence trained with simultaneous in situ and satellite observations is explored in preparation for future hyperspectral satellite missions, which offer potential to detect additional water quality indicators not previously possible. This first step identifies and develops a method to harmonize disparate, unlinked aquatic datasets to derive information about where water quality is likely degraded.

Stephanie Schollaert Uz↗

Inconsistencies in Sulphur Dioxide Emissions from the Canadian Oil Sands and Potential Implications

Satellite-derived and reported sulfur dioxide (SO2) emissions from the Canadian oil sands are shown to have been consistent up to 2013. Post-2013, these sources of emissions data diverged, with reported emissions dropping by a factor of two, while satellite-derived emissions for the region remained relatively constant, with the discrepancy (satellite-derived emissions minus reported emissions) peaking at 50 kt(SO2) yr−1 around 2016. The 2013–2014 period corresponds to when new flue-gas desulfurization units came on-line. Previous work has established a high level of consistency between at-stack SO2 emissions observations and satellite estimates, and surface monitoring network SO2 concentrations over the same multi-year period show similar trends as the satellite data, with a slight increase in concentrations post-2013. No clear explanation for this discrepancy currently exists. The implications of the discrepancy towards estimated total sulfur deposition to downwind ecosystems were estimated relative to 2013 emissions levels, with the satellite-derived values leaving the area of regional critical load exceedances of aquatic ecosystems largely unchanged from 2013 values, 335 000 km2, and reported values potentially decreasing this area to 185,000 km2.

Sulphur dioxide (SO2) emissions↗

Estimating Everglades Peat Reserves and Losses on a Landscape-Scale

The Florida Everglades formed from sawgrass and other aquatic plant remains that have accumulated over thousands of years and is a patterned peatland. The region was initially drained for agricultural and urban development in the late 1800s by the lowering of Lake Okeechobee water levels through canal drainage. Over the course of the past century, the Everglades has further been altered by the construction of canals and levees to provide control of Lake Okeechobee and Everglades water levels. The drainage has caused the loss of much of the peat of the Everglades by peat fires and microbial oxidation, much of it occurring between the 1880s and the 1950s. Plans for Everglades restoration are designed to provide additional water to flow through the remaining Everglades. Additional water into the Everglades would prevent further peat loss by reducing oxidation and encouraging the accretion of peat that has been lost. This potentially could result in the sequestration of significant quantities of atmospheric carbon. We used historic records to determine how much peat was there originally and how much has been lost. Over the past century and a half, approximately 50% of the original Everglades has been lost to agricultural and urban development. In addition, much of the peat in the remaining Everglades Protection Area has been lost. We used Geographic Information Systems technologies to determine the volume and mass of peat, the mass of carbon for each of the predrainage landscapes as well as the current Everglades regions. To do this, historical and current surveys within the Everglades were used to create elevation maps. With these maps, along with a bedrock contour map of south Florida, and soils data from the USEPA, we estimated Everglades peat characteristics. These calculations provide rough, quantitative estimates of the historical Everglades, its current condition, and the changes in the peat soil that have taken place since the 19th century. Given the uncertainties in the hindcasting of some of these data sets, this analysis provides rough estimates for the peat volumes and related constituents. Our calculations indicate that the current Everglades roughly contains less than 24% of theoriginal peat volume, 17% of its mass and 19% of its carbon. The work described was fully supported by the South Florida Water Management District, West Palm Beach, FL

Thomas Walter Dreschel↗

Impacts of Water Clarity Variability on Temperature and Biogeochemistry in the Chesapeake Bay

Estuarine water clarity depends on the concentrations of aquatic constituents, such as colored dissolved organic matter, phytoplankton, inorganic suspended solids, and detritus, which are influenced by variations in riverine inputs. These constituents directly affect temperature because when water is opaque, sunlight heats a shallower layer of the water compared to when it is clear. Despite the importance of accurately predicting temperature variability, many numerical modeling studies do not adequately account for this key process. In this study, we quantify the effect of water clarity on heating by comparing two simulations of a hydrodynamic-biogeochemical model of the Chesapeake Bay for the years 2001–2005, in which (1) water clarity is constant in space and time for the computation of solar heating, compared to (2) a simulation where water clarity varies with modeled concentrations of light-attenuating materials. In the variable water clarity simulation, the water is more opaque, particularly in the northern region of the Bay. This decrease in water clarity reduces the total heat, phytoplankton, and nitrate throughout the Bay. During the spring and summer months, surface temperatures in the northern Bay are warmer by 0.1 °C and bottom temperatures are colder by 0.2 °C in the variable light attenuation simulation. Warmer surface temperatures encourage phytoplankton growth and nutrient uptake near the head of the Bay, and fewer nutrients are transported downstream. These impacts are greater during higher river flow years, when differences in temperature, nutrients, phytoplankton, and zooplankton extend further seaward compared to other years. This study demonstrates the consequences of utilizing different light calculations for estuarine heating and biogeochemistry.

water clarity↗

Western Montana Ecological Forecasting: Modeling Habitat Suitability of Mustelid Species to Guide Detection Dog Surveys for Contaminants Monitoring, via Collected Scats in River Systems of Western Montana

Environmental contaminants are becoming increasingly prevalent in riverine ecosystems. The status of contaminants in western Montana’s relatively pristine river systems is largely unknown. Monitoring for heavy metals, brominated flame-retardants (BFRs), and pharmaceuticals is important due to their negative effects on ecosystems. Exposure to these contaminants can have significant endocrine, neurological, and reproductive effects. Contaminants easily travel up the food chain and bioaccumulate in apex predators. As predators with a largely aquatic diet, American mink (Mustela vison) and North American river otter (Lontra canadensis) serve as reliable indicator species of environmental health and the status of contaminants. Analysis of scat from these species is a noninvasive method to measure contaminant levels, and detection dogs from Working Dogs for Conservation (WD4C) have been used to locate these scat samples. To aid in the search of these samples, habitat suitability models were created for mink and otter for the years 2013-2020 and projected to 2040 using the random forest algorithm in the Software for Assisted Habitat Modeling (SAHM). Predictor variable data were acquired from Landsat 8 Operational Land Imager (OLI), Terra Moderate Resolution Imaging Spectroradiometer (MODIS), Global Precipitation Measurement Integrated Multi-satellite Retrievals for GPM (GPM IMERG), Shuttle Radar Topography Mission (SRTM), and Soil Moisture Active Passive (SMAP). Within these models, the most important variable for mink and otter habitat was distance to river. Suitable habitat also corresponded with emergent herbaceous land cover and deeper river locations. These habitat suitability models will inform sampling site section for further contaminant analysis.

Anna Winter↗

Desert Research and Technology Studies (D-RATS)

NASA is preparing to land the first woman and first person of coloron the Moon within the next decade and establish a permanent sustainable human presence before sending humans onto Mars. To ensure the success of these missions, NASA has performed operational testing in terrestrial, aquatic, and laboratory analog environments that simulate Lunar and Martian environmental characteristics. Desert Research and Technology Studies (D-RATS) is an example of a long-standing, high-fidelity terrestrial mission class analog.

B A Janoiko↗

Sky-Scanning Sun-Tracking Airborne Radiometer (3STAR): Instrument Design, Flight Testing, and Tracking Performance

The Sky-Scanning, Sun-Tracking Airborne Radiometer (3STAR) adapts commercial radiometer technology developed for the ocean color research community to airborne measurement of spectrally resolved solar irradiance and sky radiance. These atmospheric observations are used to derive aerosol optical depth (AOD), supporting localized AOD inputs for atmospheric correction of satellite and airborne data over terrestrial and aquatic (including optically dark) targets. The ability to regionally “tune” atmospheric correction schemes with relevant spatial AOD supports constraining atmospheric correction of remote sensing reflectance. Very wide dynamic range has been achieved for multi-channel band-pass-filter-radiometers originally designed for deployment into the water column. By actively tracking and directly pointing to the Sun, the light attenuation by aerosol particles in the atmospheric column can be quantified. These measurements improve knowledge of atmospheric constituents and the atmospheric corrections required to improve remote sensing capabilities for interpreting reflectance measurements from the Earth surface. 3STAR incorporates a custom Sun-tracking/sky-scanning pointing head, a Sun-tracking camera, and a commercially available, cylindrical, 19-channel radiometer tube assembly. An accurate and responsive mount and tracking system has been developed and certified to NASA and Naval Air Systems Command (NAVAIR) airworthiness standards for deployment into the aircraft slipstream. Ground and flight testing indicate typical tracking errors of less than 0.1 degrees, well within the field of view of the radiometer as required to minimize measurement uncertainty from alignment error. Preliminary AOD measurements compare to within 0.013 with 15 measurements from an Aerosol Robotic Network (AERONET) Cimel instrument at 500 nm wavelength and low solar angle.

Atmosphere↗

Reconciling Carbon-cycle Processes from Ecosystem to Global Scales

Understanding carbon (C) dynamics from ecosystem to global scales remains a challenge. Although expansion of global carbon dioxide (CO2) observatories makes it possible to estimate C-cycle processes from ecosystem to global scales, these estimates do not necessarily agree. At the continental US scale, only 5% of C fixed through photosynthesis remains as net ecosystem exchange (NEE), but ecosystem measurements indicate that only 2% of fixed C remains in grasslands, whereas as much as 30% remains in needleleaf forests. The wet and warm Southeast has the highest gross primary productivity and the relatively wet and cool Midwest has the highest NEE, indicating important spatial mismatches. Newly available satellite and atmospheric data can be combined in innovative ways to identify potential C loss pathways to reconcile these spatial mismatches. Independent datasets compiled from terrestrial and aquatic environments can now be combined to advance C-cycle science across the land–water interface.

carbon cycle↗

Using Earth-based Operational Field Tests as High-Fidelity Analogs for Planetary Surface Exploration

NASA is preparing to land the first woman and first person of color on the Moon within the next decade and establishing a permanent sustainable human presence before sending humans onto Mars. To ensure the success of these missions, NASA has performed operational testing in terrestrial, aquatic, and laboratory analog environments that simulate Lunar and Martian environmental characteristics to evaluate exploration concepts of operations (ConOps), engineering design requirements, science support needs, mission operations techniques, and crew training.

B. A. Janoiko↗

Summer temperatures during the last glaciation (MIS 5c to MIS 3) inferred from a 50,000-year chironomid record from Füramoos, southern Germany

There is a sparsity of long, continuous palaeotemperature records for the last glacial period in central Europe, particularly for the interval corresponding to Marine Isotope Stages (MIS) 4 and 3. Here we present a new, ca. 50-thousand year (ka)-long chironomid record from Füramoos, southern Germany, covering the interval from MIS 5a to MIS 3 that we use to examine lake development and then to quantitatively reconstruct mean July air temperatures. Chironomid assemblages with high abundances of taxa such as Polypedilum nubeculosum-type, Microtendipes pedellus-type, Cladopelma lateralis-type and Dicrotendipes nervosus-type imply a shallow-lake setting for the majority of the examined interval, which is corroborated by other aquatic remains such as oribatid mites, Sialidae and Ceratopogonidae. Assemblages from the interval ca. 99 to 80 ka (in the region corresponding to the Brörup Interstadial, Stadial B and early Odderade Interstadial) are dominated by taxa such as Tanytarsus glabrescens-type and Tanytarsus mendax-type and indicate relatively warm temperatures. Assemblages from the interval covering ca. 80 to 54 ka (corresponding to the late Odderade, Stadial C, Dürnten Interstadial and Stadial D) are dominated by taxa such as Sergentia coracina-type and Tanytarsus lugens-type and are typical for cooler conditions. Reconstructed July temperatures for the early Würmian (Brörup to early Odderade; ca. 99–80 ka) are 13–14 °C. Values decline to <10 °C during the late Odderade and Stadial C (ca. 80–77 ka) around the MIS 5a/4 transition. This decrease is coeval with a pronounced decrease in Northern Hemisphere summer insolation. Values stay in the range of 9–11 °C during the Dürnten and Stadial D (ca. 54–74.5 ka) and increase again to 12.5 °C during the Bellamont 1 interstadial (ca. 54–46 ka). Reconstructed July temperatures track changes in arboreal pollen percentages at Füramoos and agree with a summer-temperature decrease during the early to mid-Würmian as reported by other palaeotemperature records from Europe and the North Atlantic. Our chironomid record from Füramoos provides valuable new insights into Würmian climate dynamics in Central Europe, and corroborates other temperature reconstructions from the early to mid-Würmian glacial period.

Chironomids↗

Single-Turnover Variable Chlorophyll Fluorescence as a Tool for Assessing Phytoplankton Photosynthesis and Primary Productivity: Opportunities, Caveats and Recommendations

Phytoplankton photosynthetic physiology can be investigated through single-turnover variable chlorophyll fluorescence (ST-ChlF) approaches, which carry unique potential to autonomously collect data at high spatial and temporal resolution. Over the past decades, significant progress has been made in the development and application of ST-ChlF methods in aquatic ecosystems, and in the interpretation of the resulting observations. At the same time, however, an increasing number of sensor types, sampling protocols, and data processing algorithms have created confusion and uncertainty among potential users, with a growing divergence of practice among different research groups. In this review, we assist the existing and upcoming user community by providing an overview of current approaches and consensus recommendations for the use of ST-ChlF measurements to examine in-situ phytoplankton productivity and photo-physiology. We argue that a consistency of practice and adherence to basic operational and quality control standards is critical to ensuring data inter-comparability. Large datasets of inter-comparable and globally coherent ST-ChlF observations hold the potential to reveal large-scale patterns and trends in phytoplankton photo-physiology, photosynthetic rates and bottom-up controls on primary productivity. As such, they hold great potential to provide invaluable physiological observations on the scales relevant for the development and validation of ecosystem models and remote sensing algorithms.

variable chlorophyll fluorescence↗

Spatiotemporal Methane Emissions from Global Reservoirs

Methane (CH4) is a greenhouse gas which contributes significantly to global warming and has atmospheric concentrations which have increased considerably in the last few decades, primarily due to human-induced emissions. Natural sources such as wetlands and inland aquatic systems (i.e., reservoirs, lakes, rivers) contribute substantially to global emissions but these natural systems comprise the most uncertain components of the CH4 budget. This study addresses multiple gaps and uncertainties associated with global CH4 emissions from reservoirs and undertakes a spatial and temporal assessment of global reservoir emissions. The results from this study suggest that reservoirs occupy a global area about 300,000 km2 (comparable to the size of the country of Italy) and emit 10.1 Tg CH4 yr-1. We identify data and methodological elements of previous estimates that indicate they may overestimate these emissions. This work provides a suite of global data sets, gridded at 0.25° × 0.25°, considering reservoir surface area, spatial distribution, eco-climatic system type, and the full annual cycle of daily CH4 emissions.

Spatiotemporal↗

Seasonal Bias in Global Ocean Color Observations

In this study we identify a seasonal bias in the ocean color satellite derived remote sensing reflectances (Rrs(λ); sr-1) at the ocean color validation site, MOBY (Marine Optical BuoY). The seasonal bias in Rrs(λ) is present to varying degrees in all ocean color satellites examined, including VIIRS (Visible Infrared Imaging Radiometer Suite), SeaWiFS (Sea-viewing Wide Field-of-view Sensor), and MODIS (Moderate Resolution Imaging Spectrometer). The relative bias in Rrs has spectral dependence. Products derived from Rrs(λ) are affected by the bias to varying degrees, with particulate backscattering varying up to 50% over a year, chlorophyll varying up to 25% over a year, and absorption from phytoplankton or dissolved material varying by up to 15%. The propagation of Rrs(λ) bias into derived products is broadly confirmed on regional and global scales using Argo floats and data from the CALIOP (Cloud-Aerosol Lidar with Orthogonal Polarization) instrument aboard the CALIPSO (Cloud-Aerosol Lidar and Infrared Pathfinder) satellite. The artifactual seasonality in ocean color is prominent in areas of low biomass (i.e., subtropical gyres) and is not easily discerned in areas of high biomass. While we have eliminated several candidates that could cause the biases in Rrs(λ), there are still outstanding questions regarding potential contributions from atmospheric corrections. Specifically, we provide evidence that the aquatic bidirectional reflectance distribution function may in part cause the observed seasonal bias, but this does not preclude an additional effect of the aerosol estimation. Our investigation highlights the contributions that atmospheric correction schemes can make in introducing biases in Rrs (λ) and we recommend more simulations to discern these influence Rrs (λ) biases. Community efforts are needed to find the root cause of the seasonal bias because all past, present, and future data are or will be affected until a solution is implemented.

satellite ocean color↗

Status and Future of the FACT Network in the Northern Indian River Lagoon (Abstract for 2022 Indian River Lagoon Symposium)

Continued expansion of passive acoustic telemetry networks is allowing the movements of aquatic animals to be monitored over ever-larger distances and extended time periods. From modest beginnings in east-central Florida, the collaborative FACT Network has grown into one of the largest animal tracking networks in the world, with partners working throughout the southeastern US, Bahamas, and Caribbean. In the IRL region, tracking stations deployed across a continuum of habitats are revealing the behavior and habitat needs of our region’s most valuable sportfish, shark, and sea turtle species. This talk will summarize the status of the FACT Network as of 2022. Several ongoing and upcoming studies in the Canaveral region will be highlighted including those designed to understand the export of economically valuable sportfish from protected waters of Kennedy Space Center, inshore-offshore movements of spawning red drum, seasonal migrations of coastal sharks, and habitat use of juvenile IRL sea turtles.

Indian River Lagoon↗

Late Glacial and Holocene Environmental Variability, Lago Trasimeno, Italy

Lago Trasimeno (central Italy), 10 km wide and < 6m deep, fills a basin of tectonic origin, and is one of Europe's few endorheic lakes. We report on a multidisciplinary stratigraphic study based on seismic reflection profiles and two sediment cores, aimed at providing information on the vegetational, lithological, and climate history of this area. Trace elements, palynology, macrofossils, organic carbon, and C isotopes, coupled with AMS C-14 dating, describe environmental changes from Late-Glacial to present. The base of the cores records a Late-Glacial steppic vegetation (Poaceae, Artemisia, Amaranthaceae), with dry and cold conditions and a high charcoal/pollen ratio. An ensuing shift to a warmer and moister climate is shown by the rise of Pinus and Quercus, and shallow water aquatics such as Nitella. Early Holocene warming, indicated by Quercus, Oleaceae, Corylus, and Betula, is followed by a hiatus suggesting one or more severe drought events between 9000 and 3000 yr BP. Late Holocene presence of Alnus and Fagus indicates increased moisture, probably in winter, which would have increased lake level. Heavy metal pollution indicators (Pb, Cu, Zn) in the upper portion of the cores imply industrialization. Due to its location, to intensive and uninterrupted anthropogenic impacts since proto historical times, and to its shallow depths, Lago Trasimeno provides an important observation point for climate and environmental changes in the central Mediterranean region during and before Holocene times.

Lago trasimeno↗

Microbial Monitoring of New Cleanrooms Used to Curate Astrobiologically Relevant Asteroid Samples from Bennu and Ryugu

Introduction: NASA has constructed two new cleanrooms to house materials from the OSRIS-REx and Hayabusa2 missions to the asteroids Ryugu (162173) and Bennu (101955), respectively. In accordance with standard astromaterials curation practices, these cleanrooms will be monitored for particulate contamination and maintained to ISO 5 equivalent standards1. Since the samples in these collections are expected to contain prebiotic organic compounds that may help explain the origin of life on Earth, these labs will also be monitored for organic and biological contamination2. Samples from Ryugu arrived on Earth in December, 2020. After basic characterization in Japan, NASA received a subset of these samples at the astromaterials curation facility in Houston in December of 2021. OSIRIS-REx is expected to return samples in September, 2023. Here we present preliminary microbial monitoring results from monthly monitoring of these new labs and the connected microtomy and staging areas that support them, as they are being commissioned. We also compare these results to baseline values for other astromaterials curation labs. We will also briefly describe additional cleaning efforts employed to reduce the bioburden in these new cleanrooms. Methods: Microbial samples were collected from surfaces using a dry macrofoam swab (Puritan Brand 2518051PFRNDFD). Swabs were also opened in the lab but not touched to any surfaces to function as negative controls. Samples and controls were processed inside a class II biosafety cabinet to avoid inadvertent cross contamination. The swabs were suspended in 15 ml of PBS (Phosphate Buffered Saline) and vortexed for 20 seconds to remove cells from the swab surface. The PBS was used to inoculate Petri dishes filled with TSA (Tryptic Soy Agar), Blood Agar, or Reasoners 2 agar to check for microbial growth. Each plate was inoculated with 0.1 ml of PBS. The TSA and blood agar plates were incubated at 35˚C and the Reasoners 2 agar plates were incubated at 25˚C for seven days. Petri dishes filled with Potato dextrose agar, Saboraud dextrose agar, or Saboraud dextrose agar with 0.1 mg/ml of chloramphenicol, an antibiotic, were used to check for fungal growth. These plates were inoculated with 0.3 ml of PBS and incubated at 30˚C. The remaining PBS was frozen at -80 ˚C for DNA sequencing. After incubation, isolates were counted and reisolated for identification. Isolates were identified using the VITEK23 system or by sequencing a portion of the 16S rRNA gene for bacteria or the ribosomal internal transcribed spacer (ITS) for fungi. Sequencing was performed with an ABI 3500 Sanger sequencer. Results: During our initial sampling, six of the seven sites sampled (86%) displayed bacterial or fungal growth. Samples collected from the staging areas and microtomy labs are not included in this calculation since those areas are maintained at a lower ISO 7 equivalent cleanliness standard. A month later, only three of the seven sites (43%) displayed bacterial growth. No fungal growth was detected in the second sampling. Since new equipment had been introduced to the Hayabusa2 lab since the first round of sampling, an additional three sampling sites were included in the second round of sampling. None of these sites displayed microbial growth. These sites will be included in all future sampling efforts. Bacterial isolates have been identified from the following genera at multiple time points: Micrococcus, Staphylococcus, and Bacillus. Isolates from the genera: Microbacterium, Nocardioides, Methylocystis, and Microvirga were identified in the initial sampling, but were not present at later time points. Identification of fungal isolates is in progress. Results are summarized in Table 1. Discussion: The recovery rate or percentage of positive samples4 was initially 86%, which is higher than the median recovery rate for comparable ISO 5 equivalent curation labs like Stardust (33%), Hayabusa (33%), and Cosmic Dust (50%). However, after a month of operation, the recovery rate for these same sites decreased to 43%, which is similar to what we observe in comparable curation cleanrooms with no microbial control requirements. Adding in the new sampling sites further decreases the recovery rate to 30%. With the reduction in recovery rate, we also observed a decrease in microbial diversity. At the first time point, we observed at least 10 different bacterial species and at least two different fungi. This is a higher diversity than the median values for comparable ISO 5 equivalent labs (2-4 isolates per sampling event). After the second sampling, we observed at least 4 bacterial species and no fungi, which is more consistent with comparable labs. We expect the recovery rate and diversity in both labs to continue to decrease as routine operation continues. We will use ultrapure hydrogen peroxide to disinfect equipment and work areas prior to opening any sample containers. Most of the bacterial and fungal isolates were detected on samples from the cleanroom floors. This is consistent with baseline results from other curation labs. Organisms from the genera Bacillus, Staphylococcus, and Micrococcus that were repeatedly detected are common in cleanrooms and on human skin5,6. These organisms are generally thought to be introduced when people enter the cleanroom. Microbacterium, Nocardioides, and Microvirga have also previously been identified in astromaterials cleanrooms, but not as frequently as Bacillus, Staphylococcus, and Micrococcus. Methylocystis is a novel genus in the astromaterials cleanrooms, but it was identified with low accuracy (93% match in the sequenced region of the 16S rRNA gene) and further work is needed to confirm this identification. Microbacterium is a diverse genus with isolates identified from terrestrial and aquatic sediments. Some species of Microbacterium are capable of degrading complex organic compounds found in crude oil. The presence of these bacteria in the OSIRIS REx and Hayabusa2 cleanrooms should be closely monitored. Methylocystis is a genus of methanotrophic bacteria capable of oxidizing methane. If this identification proves to be correct and it is detected again, it should be closely monitored as well. Under nominal operating conditions, samples should not ever encounter the cleanroom floor or other high traffic areas. If we observe an increase in the bioburden in sensitive work areas that appears to be influenced by organism transfer from high traffic areas like the floors, we can employ additional hydrogen peroxide treatments to disinfect high traffic areas. Routine microbial monitoring of these labs will ensure that NASA’s astromaterials collections remain pristine and useful for scientific study. Table 1. Sampling Locations and Colony Counts Bacterial CFUa Fungal CFU Bacterial CFU Fungal CFU Lab - Location 11/2/2021 11/2/2021 12/13/2021 12/13/2021 H2b-Floor 4 8 1 0 H2-staging pass through 3 0 0 0 H2-microtomy pass through TNTCc 0 0 0 H2 Microscope 1 NA NA 0 0 H2 Microscope 2 NA NA 0 0 H2-Table NA NA 0 0 OREXd- microtomy pass through 0 0 6 0 OREX – Anteroom pass through 0 0 0 0 OREX – Floor 1 2 0 0 OREX Witness Foil Table 3 0 1 0 Staging-Floor 16 0 15 0 Microtomy-Floor 3 0 2 0 a: CFU = Colony Forming Unit b: H2 = Hayabusa2 Lab c: TNTC = too numerous to count d: OREX = OSIRIS-REx Lab References: 1. ISO 14644-1:2015 - Cleanrooms and associated controlled environments -- Part 1: Classification of air cleanliness by particle concentration. 37 (2015). 2. McCubbin, F. M. et al. Space Sci Rev 215, (2019). 3. Pincus, D. H. Encyclopedia of Rapid Microbiological Methods (2005). 4. The United States Pharmacopeial Convention. USP General Chapter <1116> 17, 784–794 (2013). 5. Sheraba, N. S., Yassin, A. S. & Amin, M. BMC Research Notes 3, 278 (2010). 6. Utescher, C. L. de A., Franzolin, M. R., Trabulsi, L. R. & Gambale, V. Brazilian Journal of Microbiology 38, 710–716 (2007).

A B Regberg↗

Satellites for long-term monitoring of inland U.S. lakes: The MERIS time series and application for chlorophyll-a

Lakes and other surface fresh waterbodies provide drinking water, recreational and economic opportunities, food, and other critical support for humans, aquatic life, and ecosystem health. Lakes are also productive ecosystems that provide habitats and influence global cycles. Chlorophyll concentration provides a common metric of water quality, and is frequently used as a proxy for lake trophic state. Here, we document the generation and distribution of the complete MEdium Resolution Imaging Spectrometer (MERIS; Appendix A provides a complete list of abbreviations) radiometric time series for over 2300 satellite resolvable inland bodies of water across the contiguous United States (CONUS) and more than 5,000 in Alaska. This contribution greatly increases the ease of use of satellite remote sensing data for inland water quality monitoring, as well as highlights new horizons in inland water remote sensing algorithm development. We evaluate the performance of satellite remote sensing Cyanobacteria Index (CI)-based chlorophyll algorithms, the retrievals for which provide surrogate estimates of phytoplankton concentrations in cyanobacteria dominated lakes. Our analysis quantifies the algorithms' abilities to assess lake trophic state across the CONUS. As a case study, we apply a bootstrapping approach to derive a new CI-to-chlorophyll relationship, ChlBS, which performs relatively well with a multiplicative bias of 1.11 (11%) and mean absolute error of 1.60 (60%). While the primary contribution of this work is the distribution of the MERIS radiometric timeseries, we provide this case study as a roadmap for future stakeholders' algorithm development activities, as well as a tool to assess the strengths and weaknesses of applying a single algorithm across CONUS.

MERIS timeseries↗