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At least 343 records · Page 19

New results in the theory of dust grain alignment

Two complementary approaches are used in an attempt to propose an appropriate formulation of the solution to the problem of magnetic alignment of grains in the diffuse and/or the more denser clouds, whatever the mechanism of rotational excitation can be. The interest of such a unified formulation is mainly that the same theoretical expression for polarization can be used everywhere, allowing for easier comparisons between regions where the physical conditions are highly different. The first consists in applying a Monte-Carlo method to a limited number of representative cases, for which all the torques acting on the grain are taken into account: impulsive random torques due to direct collisions with gas atoms, to evaporation of atoms from the surface, and to exo-energetic recombinations forming hydrogen molecules, followed by violent ejections from peculiar sites; magnetic torques. Three characteristic times are associated with these torques: the collisional damping time, the time necessary to change completely the actual sites configuration narrowly bound to the correlation time of the suprathermal torque; and the magnetic damping time. The second approach starts from a heuristic point of view. It consists in a generalization of results (Cugnon, 1983; see also Purcell and Spitzer, 1971; Greenberg, 1978) obtained for thermal alignment to the suprathermal case. It appears indeed that in two extreme cases, the thermal formulation may be used after redefinition of involved times and temperatures.

Cugnon, Pierre↗

Thermal conductivity and resonant multipole interactions

The influence of multipole interactions on exchanges of rotational energy in molecular collisions was investigated by means of a simple two-state impact parameter approximation. The calculations are restricted to linear molecules and to dipole and quadrupole fields. The effects of such exchanges on the thermal conductivity of gases and of gaseous mixtures was investigated, after correcting the kinetic theory of mixtures to include exchanges between unlike molecules. It was found that dipole-quadrupole and quadrupole-quadrupole interactions may have a significant effect for molecules with low moments of inertia. In particular, quadrupole interactions are important in the hydrogen isotopes, and the calculated corrections for H2 are consistent with recent experimental work by Harris. The theory seems capable of accounting for the anomalies observed in HF + DF and HCl + DCl mixtures in terms of multipolar accidental resonances.

Nyeland, C.↗

Analysis of NH spectrum

The A3Pi to X3Sigma- transition of NH is a common feature of cometary spectra. Since the NH molecule is likely to be formed by photodissociation of molecules such as ammonia or hydrazine, identifying the final states of the photolysis would shed light on the identity of the parent. It is shown that the transition rate for the a 1Delta to X3Sigma- transition is sufficiently fast to deplete any a1Delta concentration formed in the original photolysis process. This analysis focused on experimental spectra obtained for the comet Kohoutek. The fluorescence pumping of the NH molecule is calculated for November 29, 1973 and January 25, 1974 using the model of radiative equilibrium which assumes no collisions.

Krauss, M.↗

Particle kinetic simulation of high altitude hypervelocity flight

A new model for simulating the transfer of energy between the translational and rotational modes was derived for a homogeneous gas of diatomic molecules. The model was developed specifically for use in discrete particle simulation methods where molecular motion and inter-molecular collisions are treated at the molecular level. In such methods it is normal to assume a constant rotational collision number for the entire flowfield. The new model differs in that a temperature dependence is introduced which has been predicted by theory and observed in experiment. The new model is applied to the relaxation of rotational temperature, and is found to produce significant differences in comparison with the model normally employed at both high and low temperatures. Calculations have also been performed for a Mach 7 normal shock wave. Large differences in the solutions are again observed, with the new model offering an improved correspondence to the available experimental data.

Boyd, Iain D.↗

Grains charges in interstellar clouds

The charge of cosmic grains could play an important role in many astrophysical phenomena. It probably has an influence on the coagulation of grains and more generally on grain-grain collisions, and on interaction between charged particles and grains which could lead to the formation of large grains or large molecules. The electrostatic charge of grains depends mainly on the nature of constitutive material of the grain and on the physical properties of its environment: it results from a delicate balance between the plasma particle collection and the photoelectron emission, both of them depending on each other. The charge of the grain is obtained in two steps: (1) using the numerical model the characteristics of the environment of the grain are computed; (2) the charge of a grain which is embedded in this environment is determined. The profile of the equilibrium charge of some typical grains through different types of interstellar clouds is obtained as a function of the depth of the cloud. It is shown that the grain charge can reach high values not only in hot diffuse clouds, but also in clouds with higher densities. The results are very sensitive to the mean UV interstellar radiation field. Three parameters appear to be essential but with different levels of sensitivity of the charge: the gas density, the temperature, and the total thickness of the cloud.

Bel, N.↗

Vibrational relaxation in very high temperature nitrogen

Vibrational relaxation of N2 molecules is considered at temperatures up to 40,000 K in gas mixtures that contain electrons as well as heavy collision partners. The theory of vibrational relaxation due to N2-N2 collisions is fit to experimental data to 10,000 K by choice of the shape of the intermolecular potential and size of the collision cross section. These values are then used to extrapolate the theory to 40,000 K.

Hansen, C. Frederick↗

Meteor wake in high frame-rate images--implications for the chemistry of ablated organic compounds

Extraterrestrial organic matter may have been chemically altered into forms more ameanable for prebiotic chemistry in the wake of a meteor after ablation. We measured the rate of cooling of the plasma in the meteor wake from the intensity decay just behind a meteoroid by freezing its motion in high frame-rate 1000 frames/s video images, with an intensified camera that has a short phosphor decay time. Though the resulting cooling rate was found to be lower than theoretically predicted, our calculations indicated that there would have been insufficient collisions to break apart large organic compounds before most reactive radicals and electrons were lost from the air plasma. Organic molecules delivered from space to the early Earth via meteors might therefore have survived in a chemically altered form. In addition, we discovered that relatively small meteoroids generated far-ultraviolet emission that is absorbed in the immediate environment of the meteoroid, which may chemically alter the atmosphere over a much larger region than previously recognized.

Meteoroids↗

The evolution of organic mantles on interstellar grains

By laboratory simulation of the chemical processes on dust grains it was investigated how solid organic materials can be produced in the interstellar medium. The ice mantles that accrete on grains in molecular clouds, consisting primarily of H2O, CO, H2CO, NH3, and O2, are irradiated by the internal UV field, resulting in the storage of radicals upon photodissociation of the original molecules. Transient heating events lead to the production of oxygen-rich organic species by recombination reactions. The experiments indicated that in this way the observed amount of organic material can be produced if a grain passes a few times through a molecular cloud during its life. After the destruction of the cloud the grains enter a more diffuse medium. Here they are subjected to the interstellar UV field as well as to collisions with atomic hydrogen. Experiments show that the intense photoprocessing results in the removal of small species like H2O and NH3 as well as in carbonization of the organic molecules. Contrary to this, the atomic H flux will maintain a certain hydrogen level in the mantle. These processes likely convert the original, oxygen-rich organics into an unsaturated hydrocarbon type material such as that observed towards IRS 7 and in Comet Halley grains.

Schutte, Willem A.↗

Quantum mechanical theory of collisional ionization in the presence of intense laser radiation

The paper presents a quantum mechanical formalism for treating ionizing collisions occurring in the presence of an intense laser field. Both the intense laser radiation and the internal electronic continuum states associated with the emitted electrons are rigorously taken into account by combining discretization techniques with expansions in terms of electronic-field representations for the quasi-molecule-plus-photon system. The procedure leads to a coupled-channel description of the heavy-particle dynamics which involves effective electronic-field potential surfaces and continua. It is suggested that laser-influenced ionizing collisions can be studied to verify the effects of intense laser radiation on inelastic collisional processes. Calculation procedures for electronic transition dipole matrix elements between discrete and continuum electronic states are outlined.

Bellum, J. C.↗

Two-potential approach for electron-molecular collisions at intermediate and high energies - Application to e-N2 scatterings

A general theoretical approach is proposed for the calculation of elastic, vibrational, and rotational transitions for electron-molecule scattering at intermediate and high-electron-impact energies. In this formulation, contributions to the scattering process come from the incoherent sum of two dominant potentials: a short-range shielded nuclear Coulomb potential from individual atomic centers, and a permanent/induced long-range potential. Application to e-N2 scattering from 50-500 eV incident electron energies has yielded good agreement with absolutely calibrated experiments. Comparisons with other theoretical approaches are made. The physical picture as well as the general features of electron-molecule scattering process are discussed within the framework of the two-potential approach.

Choi, B. H.↗

Line Coupling in Atmospheric Spectra

The theoretical modeling of atmospheric spectra is important for a number of different applications: for instance, in the determination of minor atmospheric constituents such as ozone, carbon dioxide, CFC's etc.; in monitoring the temperature profile for climate studies; and in measuring the incoming and outgoing radiation to input into global climate models. In order to accomplish the above mentioned goal, one needs to know the spectral parameters characterizing the individual spectral lines (frequency, width, strength, and shape) as well as the physical parameters of the atmosphere (temperature, abundances, and pressure). When all these parameters are known, it is usually assumed that the resultant spectra and concomitant absorption coefficient can then be calculated by a superposition of individual profiles of appropriate frequency, strength and shape. However, this is not true if the lines are 'coupled'. Line coupling is a subtle effect that takes place when lines of a particular molecule overlap in frequency. In this case when the initial states and the final states of two transitions are connected by collisions, there is a quantum interference resulting in perturbed shapes. In general, this results in the narrowing of Q-branches (those in which the rotational quantum number does not change), and vibration-rotational R- and P branches (those in which the rotational quantum number changes by +/- 1), and in the spectral region beyond band heads (regions where the spectral lines pile up due to centrifugal distortion). Because these features and spectral regions are often those of interest in the determination of the abundances and pressure-temperature profiles, one must take this effect into account in atmospheric models.

Tipping, R. H.↗

The Binary Collision-Induced Second Overtone Band of Gaseous Hydrogen: Modelling and Laboratory Measurements

Collision-induced absorption (CIA) is the major source of the infrared opacity of dense planetary atmospheres which are composed of nonpolar molecules. Knowledge of CIA absorption spectra of H2-H2 pairs is important for modelling the atmospheres of planets and cold stars that are mainly composed of hydrogen. The spectra of hydrogen in the region of the second overtone at 0.8 microns have been recorded at temperatures of 298 and 77.5 K for gas densities ranging from 100 to 800 amagats. By extrapolation to zero density of the absorption coefficient measured every 10 cm(exp -1) in the spectral range from 11100 to 13800 cm(exp -1), we have determined the binary absorption coefficient. These extrapolated measurements are compared with calculations based on a model that was obtained by using simple computer codes and lineshape profiles. In view of the very weak absorption of the second overtone band, we find the agreement between results of the model and experiment to be reasonable.

Brodbeck, C.↗

Lyman-alpha and Balmer-series fluorescence from hydrogen photofragments of H2O vapor

Production cross sections associated with the atomic hydrogen Lyman-alpha and Balmer-series (3-9 to 2) fluorescence observed in H2O photodissociation are measured, and maximum fluorescence production cross sections for the two series are reported. Repulsive potential energy curves corresponding to the respective pseudodiatomic OH-H(n) molecule are constructed according to the Franck-Condon principle, and the efficiencies for converting H(2S) to H(2P) by H2 collisions and by H2O collisions are estimated. The data are considered with reference to cometary photochemistry.

Wu, C. Y. R.↗

Analysis of the upper atmosphere CO2(nu-2) vibrational temperatures retrieved from ATMOS/Spacelab 3 observations

An analysis of the upper atmospheric (80-116 km) CO2(nu-2) vibrational temperatures retrieved from atmospheric trace molecule spectroscopy (ATMOS) experiment Spacelab 3 spectra by using a nonlocal thermodynamic equilibrium (non-LTE) radiative transfer model is presented. Thermal collisions with atmospheric atomic oxygen keep this vibrational state very close to LTE up to around 100 km. Above this height, the different deviations from LTE retrieved from ATMOS/Spacelab 3 spectra for the Northern and the Southern Hemispheres are explained in terms of this collisional process and in terms of the different kinetic temperature profiles measured at those locations. From these simultaneous observations of the kinetic and CO2(nu-2) vibrational temperatures, a deactivation rate of CO2(nu-2) by O(3P) has been derived which leads to a rate coefficient value between 3 and 6 x 10 exp -12 cu cm/s and favors an independent or negative temperature dependence rate constant for the atmospheric temperature range. Cooling rates induced by the CO2 15-micron fundamental band in the upper mesosphere and lower thermosphere were derived from the simultaneous kinetic temperature, CO2(nu-2) vibrational temperature, and CO2 concentration, as measured by ATMOS/Spacelab 3, and found to be a factor of between 5 and 10 times larger than those generally accepted until very recently.

Lopez-Puertas, M.↗

Clusters of DNA induced by ionizing radiation: formation of short DNA fragments. I. Theoretical modeling

We have developed a general theoretical model for the interaction of ionizing radiation with chromatin. Chromatin is modeled as a 30-nm-diameter solenoidal fiber comprised of 20 turns of nucleosomes, 6 nucleosomes per turn. Charged-particle tracks are modeled by partitioning the energy deposition between primary track core, resulting from glancing collisions with 100 eV or less per event, and delta rays due to knock-on collisions involving energy transfers >100 eV. A Monte Carlo simulation incorporates damages due to the following molecular mechanisms: (1) ionization of water molecules leading to the formation of OH, H, eaq, etc.; (2) OH attack on sugar molecules leading to strand breaks: (3) OH attack on bases; (4) direct ionization of the sugar molecules leading to strand breaks; (5) direct ionization of the bases. Our calculations predict significant clustering of damage both locally, over regions up to 40 bp and over regions extending to several kilobase pairs. A characteristic feature of the regional damage predicted by our model is the production of short fragments of DNA associated with multiple nearby strand breaks. The shapes of the spectra of DNA fragment lengths depend on the symmetries or approximate symmetries of the chromatin structure. Such fragments have subsequently been detected experimentally and are reported in an accompanying paper (B. Rydberg, Radiat, Res. 145, 200-209, 1996) after exposure to both high- and low-LET radiation. The overall measured yields agree well quantitatively with the theoretical predictions. Our theoretical results predict the existence of a strong peak at about 85 bp, which represents the revolution period about the nucleosome. Other peaks at multiples of about 1,000 bp correspond to the periodicity of the particular solenoid model of chromatin used in these calculations. Theoretical results in combination with experimental data on fragmentation spectra may help determine the consensus or average structure of the chromatin fibers in mammalian DNA.

Non-NASA Center↗

The Submillimeter-wave Rotational Spectra of Interstellar Molecules

We discuss past and recent progress in our long-term laboratory program concerning the submillimeter-wave rotational spectroscopy of known and likely interstellar molecules, especially those associated with regions of high-mass star formation. Our program on the use of spectroscopy to study rotationally inelastic collisions of interstellar interest is also briefly mentioned.

Herbst, Eric↗

DNA Recombinase Proteins, their Function and Structure in the Active Form, a Computational Study

Homologous recombination is a crucial sequence of reactions in all cells for the repair of double strand DNA (dsDNA) breaks. While it was traditionally considered as a means for generating genetic diversity, it is now known to be essential for restart of collapsed replication forks that have met a lesion on the DNA template (Cox et al., 2000). The central stage of this process requires the presence of the DNA recombinase protein, RecA in bacteria, RadA in archaea, or Rad51 in eukaryotes, which leads to an ATP-mediated DNA strand-exchange process. Despite many years of intense study, some aspects of the biochemical mechanism, and structure of the active form of recombinase proteins are not well understood. Our theoretical study is an attempt to shed light on the main structural and mechanistic issues encountered on the RecA of the e-coli, the RecA of the extremely radio resistant Deinococcus Radiodurans (promoting an inverse DNA strand-exchange repair), and the homolog human Rad51. The conformational changes are analyzed for the naked enzymes, and when they are linked to ATP and ADP. The average structures are determined over 2ns time scale of Langevian dynamics using a collision frequency of 1.0 ps(sup -1). The systems are inserted in an octahedron periodic box with a 10 Angstrom buffer of water molecules explicitly described by the TIP3P model. The corresponding binding free energies are calculated in an implicit solvent using the Poisson-Boltzmann solvent accessible surface area, MM-PBSA model. The role of the ATP is not only in stabilizing the interaction RecA-DNA, but its hydrolysis is required to allow the DNA strand-exchange to proceed. Furthermore, we extended our study, using the hybrid QM/MM method, on the mechanism of this chemical process. All the calculations were performed using the commercial code Amber 9.

Carra, Claudio↗