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At least 343 records · Page 19

Phytoplankton production in the Sargasso Sea as determined using optical mooring data

Optical measurements from an untended mooring provide high-frequency observations of in-water optical properties and permit the estimation of important biological parameters continuously as a function of time. A 9-month time series, composed of three separate deployments, of optical data from the BIOWATT 1987 deep-sea mooring located in the oligotrophic waters of the Sargasso Sea at 34 deg N, 70 deg W are presented. These data have been tested using several bio-optical models for the purpose of providing a continuous estimate of phytoplankton productivity. The data are discussed in the context of contemporaneous shipboard observations and for future ocean color satellite observations. We present a continuous estimation of phytoplankton productivity for the 9-month time series. Results from the first 70-day deployment are emphasized to demonstrate the utility of optical observations as proxy measures of biological parameters, to present preliminary analysis, and to compare our bio-optical observations with concurrent physical observations. The bio-optical features show variation in response to physical forcings including diel variations of incident solar irradiance, episodic changes corresponding to wind forcing, variability caused by advective mesoscale eddy events in the vicinity of the mooring, and seasonal variability corresponding to changes in solar radiation, shoaling of the mixed layer depth, and succession of phytoplankton populations.

Waters, K. J.↗

Galileo spacecraft modal identification using an eigensystem realization algorithm

A modal parameter identification technique referred to as the Eigensystem Realization Algorithm (ERA) was applied to free-response measurements from the Galileo spacecraft modal survey test. The data were recorded following single-point random excitation of the structure. This work is one phase in a research project coordinated by the Jet Propulsion Laboratory to compare the performance of various contemporary identification techniques using Galileo data. Principal emphasis is placed on estimating the accuracy of the ERA-identified modal parameters. Various accuracy indicators, such as Modal Amplitude Coherence and Modal Phase Collinearity, are discussed. More than 20 modes of the spacecraft were identified, demonstrating the ability of the ERA method to determine the dynamics of such complex structures using only a few seconds of test data.

Pappa, R. S.↗

Computer Model Calibration with Time Series Data Using Deep Learning and Quantile Regression

Computer models play a key role in many scientific and engineering problems. One major source of uncertainty in computer model experiments is input parameter uncertainty. Computer model calibration is a formal statistical procedure to infer input parameters by combining information from model runs and observational data. The existing standard calibration framework suffers from inferential issues when the model output and observational data are high-dimensional dependent data, such as large time series, due to the difficulty in building an emulator and the nonidentifiability between effects from input parameters and data-model discrepancy. To overcome these challenges, we, in this work, propose a new calibration framework based on a deep neural network (DNN) with long short-term memory layers that directly emulates the inverse relationship between the model output and input parameters. Adopting the “learning with noise” idea, we train our DNN model to filter out the effects from data-model discrepancy on input parameter inference. We also formulate a new way to construct interval predictions for DNN using quantile regression to quantify the uncertainty in input parameter estimates. Through a simulation study and real data application with the Weather Research and Forecasting Model Hydrological modeling system (WRF-Hydro), we show our approach can yield accurate point estimates and well-calibrated interval estimates for input parameters.

97 MATHEMATICS AND COMPUTING↗

Neural networks for parameter estimation in intractable models

The goal is to use deep learning models to estimate parameters in statistical models when standard likelihood estimation methods are computationally infeasible. For instance, inference for max-stable processes is exceptionally challenging even with small datasets, but simulation is straightforward. Data from model simulations are used to train deep neural networks and learn statistical parameters from max-stable models. The proposed neural network-based method provides a competitive alternative to current approaches, as demonstrated by considerable accuracy and computational time improvements. Finally, it serves as a proof of concept for deep learning in statistical parameter estimation and can be extended to other estimation problems.

97 MATHEMATICS AND COMPUTING↗

Parameter identification for nonlinear aerodynamic systems

Parameter identification for nonlinear aerodynamic systems is examined. It is presumed that the underlying model can be arranged into an input/output (I/O) differential operator equation of a generic form. The algorithm estimation is especially efficient since the equation error can be integrated exactly given any I/O pair to obtain an algebraic function of the parameters. The algorithm for parameter identification was extended to the order determination problem for linear differential system. The degeneracy in a least squares estimate caused by feedback was addressed. A method of frequency analysis for determining the transfer function G(j omega) from transient I/O data was formulated using complex valued Fourier based modulating functions in contrast with the trigonometric modulating functions for the parameter estimation problem. A simulation result of applying the algorithm is given under noise-free conditions for a system with a low pass transfer function.

Pearson, Allan E.↗

Linear filtering of ballistic-entry-probe data for atmospheric reconstruction.

A Kalman-Schmidt filter is used to estimate atmospheric and trajectory parameters for entry into the Venusian atmosphere. A significantly improved version of the Landing Trajectory Reconstruction (LTR) computer program, used to obtain the estimates is described. Major improvements involve precision and linearity control of numerical differencing, corrected perturbation modeling, and incorporation of a refractivity model. Important results show that gyroscopic data are not usable with LTR, that atmospheric properties are generally well estimated for altitudes less than 100 km, and that the two LTR modes of operation are complementary in performance.

Sabin, M. L.↗

Polarimetric radar data decomposition and interpretation

Significant efforts have been made to decompose polarimetric radar data into several simple scattering components. The components which are selected because of their physical significance can be used to classify SAR (Synthetic Aperture Radar) image data. If particular components can be related to forest parameters, inversion procedures may be developed to estimate these parameters from the scattering components. Several methods have been used to decompose an averaged Stoke's matrix or covariance matrix into three components representing odd (surface), even (double-bounce) and diffuse (volume) scatterings. With these decomposition techniques, phenomena, such as canopy-ground interactions, randomness of orientation, and size of scatters can be examined from SAR data. In this study we applied the method recently reported by van Zyl (1992) to decompose averaged backscattering covariance matrices extracted from JPL SAR images over forest stands in Maine, USA. These stands are mostly mixed stands of coniferous and deciduous trees. Biomass data have been derived from field measurements of DBH and tree density using allometric equations. The interpretation of the decompositions and relationships with measured stand biomass are presented in this paper.

Sun, Guoqing↗

Advanced multilateration theory, software development, and data processing: The MICRODOT system

The process of geometric parameter estimation to accuracies of one centimeter, i.e., multilateration, is defined and applications are listed. A brief functional explanation of the theory is presented. Next, various multilateration systems are described in order of increasing system complexity. Expected systems accuracy is discussed from a general point of view and a summary of the errors is listed. An outline of the design of a software processing system for multilateration, called MICRODOT, is presented next. The links of this software, which can be used for multilateration data simulations or operational data reduction, are examined on an individual basis. Functional flow diagrams are presented to aid in understanding the software capability. MICRODOT capability is described with respect to vehicle configurations, interstation coordinate reduction, geophysical parameter estimation, and orbit determination. Numerical results obtained from MICRODOT via data simulations are displayed both for hypothetical and real world vehicle/station configurations such as used in the GEOS-3 Project. These simulations show the inherent power of the multilateration procedure.

Escobal, P. R.↗

The effects of random accelerations on estimation accuracy with applications to the Mariner 1969 relativity experiment

A simple point of view is presented for establishing the relationship between a general modeling error and estimation accuracy. Tentative models are given for the random, nongravitational forces thought likely to affect the Mariner 6 and 7 spacecraft. The navigation data from these spacecraft were used to determine the relativity parameter Gamma. The effect that random accelerations have on the classical least squares filter, which assumes the accelerations do not exist, is calculated, and it is demonstrated that their presence seriously affects the estimates, particularly when an extended data arc is employed. Finally, some preliminary exploration using sequential-type filters, which attempt to model and thus ameliorate the effects of these same accelerations, is reported.

Curkendall, D. W.↗

Detecting change as it occurs

Traditionally climate changes have been detected from long series of observations and long after they have happened. Our 'inverse sequential' procedure, for detecting change as soon as it occurs, describes the existing or most recent data by their frequency distribution. Its parameter(s) are estimated both from the existing set of observations and from the same set augmented by 1,2,....j new observations. Individual-value probability products ('likelihoods') are used to form ratios which yield two probabilities for erroneously accepting the existing parameter(s) as valid for the augmented data set, and vice versa. A genuine parameter change is signaled when these probabilities (or a more stable compound probability) show a progressive decrease. New parameter values can then be estimated from the new observations alone using standard statistical techniques. The inverse sequential procedure will be illustrated for global annual mean temperatures (assumed normally distributed), and for annual numbers of North Atlantic hurricanes (assumed to represent Poisson distributions). The procedure was developed, but not yet tested, for linear or exponential trends, and for chi-squared means or degrees of freedom, a special measure of autocorrelation.

Radok, Uwe↗

Evaluation of Sentinel-1A Data For Above Ground Biomass Estimation in Different Forests in India

Use of remote sensing data for mapping and monitoring of forest biomass across large spatial scales can aid in addressing uncertainties in carbon cycle. Earlier, several researchers reported on the use of Synthetic Aperture Radar (SAR) data for characterizing forest structural parameters and the above ground biomass estimation. However, these studies cannot be generalized and the algorithms cannot be applied to all types of forests without additional information on the forest physiognomy, stand structure and biomass characteristics. The radar backscatter signal also saturates as forest parameters such as biomass and the tree height increase. It is also not clear how different polarizations (VV versus VH) impact the backscatter retrievals in different forested regions. Thus, it is important to evaluate the potential of SAR data in different landscapes for characterizing forest structural parameters. In this study, the SAR data from Sentinel-1A has been used to characterize forest structural parameters including the above ground biomass from tropical forests of India. Ground based data on tree density, basal area and above ground biomass data from thirty-eight different forested sites has been collected to relate to SAR data. After the pre-processing of Sentinel 1-A data for radiometric calibration, geo-correction, terrain correction and speckle filtering, the variability in the backscatter signal in relation tree density, basal area and above biomass density has been investigated. Results from the curve fitting approach suggested exponential model between the Sentinel-1A backscatter versus tree density and above ground biomass whereas the relationship was almost linear with the basal area in the VV polarization mode. Of the different parameters, tree density could explain most of the variations in backscatter. Both VV and VH backscatter signals could explain only thirty and thirty three percent of variation in above biomass in different forest sites of India. Results also suggested saturation of the Sentinel-1A backscatter signal around hundred tonnes per hectare for VV polarization and one hundred and forty five tonnes per hectare for VH polarization. The presentation will highlight the above results in addition to potentials and limitations of Sentinel-1A data for retrieving forest structural parameters. Also, background information on different forest types of India, biomass variations and forest type mapping efforts in the region will be presented.

Data↗

Uncertainty quantification in ToxCast high throughput screening

High throughput screening (HTS) projects like the U.S. Environmental Protection Agency’s ToxCast program are required to address the large and rapidly increasing number of chemicals for which we have little to no toxicity measurements. Concentration-response parameters such as potency and efficacy are extracted from HTS data using nonlinear regression, and models and analyses built from these parameters are used to predict in vivo and in vitro toxicity of thousands of chemicals. How these predictions are impacted by uncertainties that stem from parameter estimation and propagated through the models and analyses has not been well explored. While data size and complexity makes uncertainty quantification computationally expensive for HTS datasets, continued advancements in computational resources have allowed these computational challenges to be met. This study uses nonparametric bootstrap resampling to calculate uncertainties in concentration-response parameters from a variety of HTS assays. Using the ToxCast estrogen receptor model for bioactivity as a case study, we highlight how these uncertainties can be propagated through models to quantify the uncertainty in model outputs. Uncertainty quantification in model outputs is used to identify potential false positives and false negatives and to determine the distribution of model values around semi-arbitrary activity cutoffs, increasing confidence in model predictions. At the individual chemical-assay level, curves with high variability are flagged for manual inspection or retesting, focusing subject-matter-expert time on results that need further input. This work improves the confidence of predictions made using HTS data, increasing the ability to use this data in risk assessment.

59 BASIC BIOLOGICAL SCIENCES↗

Community Data Mining Approach for Surface Complexation Database Development

This paper presents a comprehensive data-to-model workflow, including a findable, accessible, interoperable, reusable (FAIR) community sorption database (newly developed LLNL Surface Complexation/Ion Exchange (L-SCIE) database) along with a data fitting workflow to efficiently optimize surface complexation reaction constants with multiple surface complexation model (SCM) constructs. This workflow serves as a universal framework to mine, compile, and analyze large numbers of published sorption data as well as to estimate reaction constants for parameterizing reactive transport models. Here the framework includes (1) data digitization from published papers, (2) data unification including unit conversions, and (3) data-model integration and reaction constant estimation using geochemical software PHREEQC coupled with the universal parameter estimation code PEST. We demonstrate our approach using an analysis of U(VI) sorption to quartz based on a first L-SCIE implementation, concluding that a multisite SCM construct with carbonate surface species yielded the best fit to community data. Surface complexation reaction constants extracted from this approach captured all available sorption data available in the literature and provided insight into previously published reaction constants and surface complexation model constructs. The L-SCIE sorption database presented herein allows for automating this approach across a wide range of metals and minerals and implementing novel machine learning approaches to reactive transport in the future.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗

Hydrologic models for land-atmosphere retrospective studies of the use of LANDSAT and AVHRR data

The use of a Geographic Information System (GIS) and LANDSAT analysis in conjunction with the Simulator for Water Resources on a Rural Basin (SWRRB) hydrologic model to examine the water balance on the Little Washita River basin is discussed. LANDSAT analysis was used to divide the basin into eight non-contiguous land covers or subareas: rangeland, grazed range, winter wheat, alfalfa/pasture, bare soil, water, woodland, and impervious land (roads, quarry). The use of a geographic information system allowed for the calculation of SWRRB model parameters in each subarea. Four data sets were constructed in order to compare SWRRB estimates of hydrologic processes using two methods of maximum LAI and two methods of watershed subdivision. Maximum LAI was determined from a continental scale map, which provided a value of 4.5 for the entire basin, and from its association with the type of land-cover (eight values). The two methods of watershed subdivision were determined according to drainage subbasin (four) and the eight land-covers. These data sets were used with the SWRRB model to obtain daily hydrologic estimates for 1985. The results of the one year analysis lead to the conclusion that the greater homogeneity of a land-cover subdivision provides better water yield estimates than those based on a drainage properties subdivision.

Duchon, Claude E.↗

Hydrologic models for land-atmosphere retrospective studies of the use of LANDSAT and AVHRR data

The use of a Geographic Information System (GIS) and LANDSAT analysis in conjunction with the Simulator for Water Resources on a Rural Basin (SWRRB) hydrologic model to examine the water balance on the Little Washita River basin is discussed. In the research completed to date LANDSAT analysis was used to divide the basin into eight non-contiguous land covers or sub areas. The use of a geographic informatin system allowed for the calculation of SWRRB model parameters in each subarea. Four data sets were constructed in order to compare SWRRB estimates of hydrologic processes using two methods of maximum LAI and two methods of watershed division. These data sets were used with the SWRRB model to obtain daily hydrologic estimates for 1985.

Duchon, Claude E.↗

Synthesis of observed and simulated rain microphysics to inform a new Bayesian statistical framework for microphysical parameterization in climate models (Final Scientific Report)

This project aimed to investigate a new approach to bulk microphysics schemes. We identified the need to move beyond the fixed structural assumptions and approximation of existing schemes. For example, most schemes assume some functional form for the rain drop size distribution (e.g. a gamma or exponential distribution). Most schemes then evolve some number of statistical moments of that distribution via various processes, such as evaporation, sedimentation, collision-coalescence, and collisional breakup. These microphysical processes, in turn, are typically some fixed functional form derived from either some other (more detailed) model, or using some single-particle rates that are then integrated over the size distribution. While these process rate functions may have some free parameters to adjust, in other cases doing so is impossible (e.g. when the process rates are analytical or piecewise solutions to some target function). Our goal was to build and test a scheme that assumed no size distribution form, and used a series of power laws as the basis for the process rates. Moments of the size distribution would be predicted, but no underlying size distribution would be specified. Any number or choice of size distribution moments could be used, and any number of power laws could be employed to model the process rates. Thus, our approach is flexible, and can seamlessly scale across levels of complexity, as demanded by the data. Bayesian inference then would provide the formalism to estimate the model parameters and structure, allowing for robust uncertainty quantification. We proposed testing this framework in idealized simulations using bin microphysical schemes as a data source. We also proposed using real data to inform our microphysics scheme, and also that we would integrate our scheme into WRF.

58 GEOSCIENCES↗

MEDLI2: MISP Inferred Aerothermal Environment and Flow Transition Assessment

The Mars Entry, Descent, and Landing Instrumentation 2 (MEDLI2) sensor suite on the Mars2020 mission contained multiple sensors on the aeroshell to measure the aerothermal environment during entry into the Martian atmosphere. These sensors performed superbly and successfully returned forebody and aftbody heating measurements. Analysis of MEDLI2 data indicated flow transitioning from a laminar to turbulent state on the heatshield. No evidence of flow transition was observed on the backshell. Two methods were used to estimate flow transition times on the heatshield: (1) temperature gradient of near-surface thermocouple data and (2) heat flux gradient from an inverse reconstruction approach using thermocouple data and material response modeling. Both methods produced similar transition times with an estimated accuracy of ±1 s. To assess various transition criteria, transition parameters were evaluated at each sensor location using flow field solutions from computational fluid dynamics (CFD) simulations. The idea was to use conservative values inferred from MEDLI2 data as transition criteria for other Mars missions. To test this hypothesis, MEDLI data from the Mars Science Laboratory (MSL) mission was used to compare predicted vs. actual flow transition times. The comparisons suggest smooth wall transition criteria are not well-suited in modeling the rapid progression of a turbulent transition front. Transition criteria containing a roughness element parameter agreed better with the flight data. In summary, critical transition values derived from MEDLI2 data may be used as a starting point in constructing a flow transition model for future Mars missions.

Chun Y Tang↗

Autonomous Modal Identification of the Space Shuttle Tail Rudder

Autonomous modal identification automates the calculation of natural vibration frequencies, damping, and mode shapes of a structure from experimental data. This technology complements damage detection techniques that use continuous or periodic monitoring of vibration characteristics. The approach shown in the paper incorporates the Eigensystem Realization Algorithm (ERA) as a data analysis engine and an autonomous supervisor to condense multiple estimates of modal parameters using ERA's Consistent-Mode Indicator and correlation of mode shapes. The procedure was applied to free-decay responses of a Space Shuttle tail rudder and successfully identified the seven modes of the structure below 250 Hz. The final modal parameters are a condensed set of results for 87 individual ERA cases requiring approximately five minutes of CPU time on a DEC Alpha computer.

Pappa, Richard S.↗