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At least 343 records · Page 19

Extrasolar Planet Inferometric Survey (EPIcS)

The discovery of the nature of the solar system was a crowning achievement of Renaissance science. The quest to evaluate the properties of extrasolar planetary systems is central to both the intellectual understanding of our origins and the cultural understanding of humanity's place in the Universe; thus it is appropriate that the goals and objectives of NASA's breakthrough Origins program emphasize the study of planetary systems, with a focus on the search for habitable planets. We propose an ambitious research program that will use SIM - the first major mission of the Origins program - to explore planetary systems in our Galactic neighborhood. Our program is a novel two-tiered SIM survey of nearby stars that exploits the capabilities of SIM to achieve two scientific objectives: (i) to identify Earth-like planets in habitable regions around nearby Sunlike stars: and (ii) to explore the nature and evolution of planetary systems in their full variety. The first of these objectives was recently recommended by the Astronomy and Astrophysics Survey Committee (the McKee-Taylor Committee) as a prerequisite for the development of the Terrestrial Planet Finder mission later in the decade. Our program combines this two-part survey with preparatory and contemporaneous research designed to maximize the scientific return from the limited and thus precious observing resources of SIM.

Shao, Michael↗

Taking Measure of the Milky Way

We intend to use SIM to make definitive measurements of fundamental structural and dynamical parameters of the Milky Way. The important niche in dynamical parameter space afforded by SIM can be exploited to resolve, with unprecedented precision, a number of classical problems of Galactic astronomy. In addition, we have developed new tests of the Galactic mass distribution specifically designed for data with the special properties of SIM products. Our proposed suite of experiments will utilize the SIM Astrometric Grid as well as complementary observations of star clusters and other strategically-selected, distant "test particles" for a definitive characterization of the major components (bulge, disk, halo, satellite system) of the Milky Way. Specifically, our goals will be: 1) The determination of two fundamental parameters that play a central role in virtually every problem in Galactic astronomy, namely (a) the solar distance to the center of the Milky Way, R(sub 0); (b) the solar angular velocity around the Galactic: center, omega(sub 0). 2) The measurement of fundamental dynamical properties of the Milky Way, among them (a) the pattern speed of the central bar (b) the rotation field and velocity-dispersion tensor in the disk (c) the kinematics (mean rotational velocity and velocity dispersion tensor) of the halo as a function of position 3. The definition of the mass distribution of the Galaxy, which is dominated by the presence of dark matter. We intend to measure (a) the relative contribution of the disk and halo to the gravitational potential (b) the local volume and surface mass density of the disk (c) the shape, mass and extent of the dark halo of the Milky Way out to 250 kpc.

Majewski, Steven R.↗

High-precision early mission narrow angle sciene with the Space Interferometry Mission

We have developed a technique that allows SIM to measure relative stellar positions with an accuracy of 1 micro-arcsecond at any time during its 5-yr mission. Unlike SIM's standard narrow-angle approach, Gridless Narrow Angle Astrometry (GNAA) does not rely on the global reference frame of grid stars that reaches full accuracy after 5 years. GNAA is simply the application of traditional single-telescope narrow angle techniques to SIM's narrow angle optical path delay measurements. In GNAA, a set of reference stars and a target star are observed at several baseline orientations. A linearized model uses delay measurements to solve for star positions and baseline orientations. A conformal transformation maps observations at different epochs to a common reference frame. The technique works on short period signals (P=days to months), allowing it to be applied to many of the known extra-solar planets, intriguing radio/X- ray binaries, and other periodic sources. The technique's accuracy is limited in the long-term by false acceleration due to a combination of reference star and target star proper motion. The science capability 1 micro-arcsecond astrometric precision - is unique to SIM.

Space Interferometry Mission↗

Enhancing the ATIC Charge Resolution

The Advanced Thin Ionization Calorimeter (ATIC) experiment measures the energy spectra of elements, from H to Fe, in the energy region from about 100 GeV to tens of TeV. The ATIC instrument was flown twice in long-duration balloon flights around the South Pole; the ATIC-1 test flight during Dec. 2000 - Jan. 2001 and the ATIC-2 science flight during Dec. 2002 - Jan. 2003. Analyses of both datasets have, to date, relied upon the highly segmented Silicon Matrix (SiM) detector to separate the incident cosmic ray from the calorimeter backscatter and to identify the charge. This method has worked well, enabling ATIC to separate protons from helium and to resolve all the major species up through iron. This charge resolution can be significantly improved by restricting the analysis to particle trajectories that pass through two SiM pixels at the cost of using only a fraction of the potential instrument geometry. However, immediately below the SiM is the two layer SI hodoscope (x, y) consisting of Bicron BC-408 plastic scintillator 2 cm wide, 1 cm thick, 88.2 cm long strips viewed by Hamamatsu R5611 photomultiplier tubes on each end of each strip. The primary purpose of the ATIC hodoscopes is to provide a fast trigger, and each hodoscope includes two crossed layers of strips (42 per layer in the case of Sl) providing supplemental particle trajectory information. The hodoscope readout electronics were designed to provide reasonable charge resolution over the dynamic range from protons through iron. This presentation discusses the S 1 hodoscope energy deposit calibrations, examines the charge resolution possible with this detector and investigates combining the S1 and SiM charge measurements to improve the overall ATIC charge resolution while minimizing degradation of the instrument geometry.

Guzik, T. G.↗

Quasar Astrophysics with the Space Interferometry Mission

Optical astrometry of quasars and active galaxies can provide key information on the spatial distribution and variability of emission in compact nuclei. The Space Interferometry Mission (SIM PlanetQuest) will have the sensitivity to measure a significant number of quasar positions at the microarcsecond level. SIM will be very sensitive to astrometric shifts for objects as faint as V = 19. A variety of AGN phenomena are expected to be visible to SIM on these scales, including time and spectral dependence in position offsets between accretion disk and jet emission. These represent unique data on the spatial distribution and time dependence of quasar emission. It will also probe the use of quasar nuclei as fundamental astrometric references. Comparisons between the time-dependent optical photocenter position and VLBI radio images will provide further insight into the jet emission mechanism. Observations will be tailored to each specific target and science question. SIM will be able to distinguish spatially between jet and accretion disk emission; and it can observe the cores of galaxies potentially harboring binary supermassive black holes resulting from mergers.

instrumentation↗

Solar UV Variations During the Decline of Cycle 23

Characterization of temporal and spectral variations in solar ultraviolet irradiance over a solar cycle is essential for understanding the forcing of Earth's atmosphere and climate. Satellite measurements of solar UV variability for solar cycles 21, 22, and 23 show consistent solar cycle irradiance changes at key wavelengths (e.g. 205 nm, 250 nm) within instrumental uncertainties. All historical data sets also show the same relative spectral dependence for both short-term (rotational) and long-term (solar cycle) variations. Empirical solar irradiance models also produce long-term solar UV variations that agree well with observational data. Recent UV irradiance data from the Solar Radiation and Climate Experiment (SORCE) Spectral Irradiance Monitor (SIM) and Solar Stellar Irradiance Comparison Experiment (SOLSTICE) instruments covering the declining phase of Cycle 23 present a different picture oflong-term solar variations from previous results. Time series of SIM and SOLSTICE spectral irradiance data between 2003 and 2007 show solar variations that greatly exceed both previous measurements and predicted irradiance changes over this period, and the spectral dependence of the SIM and SOLSTICE variations during these years do not show features expected from solar physics theory. The use of SORCE irradiance variations in atmospheric models yields substantially different middle atmosphere ozone responses in both magnitude and vertical structure. However, short-term solar variability derived from SIM and SOLSTICE UV irradiance data is consistent with concurrent solar UV measurements from other instruments, as well as previous results, suggesting no change in solar physics. Our analysis of short-term solar variability is much less sensitive to residual instrument response changes than the observations of long-term variations. The SORCE long-term UV results can be explained by under-correction of instrument response changes during the first few years of measurements, rather than requiring an unexpected change in the physical behavior of the Sun.

DeLand, Matthew, T.↗

Simulated Multipath Using Software Generated GPS Signals

Depending on the environment, multipath can be one of the largest error sources contributing to degradation in Global Navigation Satellite System (GNSS) (e.g., GPS) performance. Multipath is a phenomenon that occurs as radio signals reflect off of surfaces, such as buildings, producing multiple copies of the original signal. When this occurs with GPS signals, it results in one or more delayed signals arriving at the receiver with or without the on-time/direct GPS signal. The receiver measures the composite of these signals which, depending on the severity of the multipath, can substantially degrade the accuracy of the receiver's calculated position. Multipath is commonly experienced in cities due to tall buildings and its mitigation is an ongoing area of study. This research demonstrates a novel approach for simulating GPS multipath through the modification of an open-source tool, GPS-SDR-SIM. The resulting additional testing capability could allow for improved development of multipath mitigating technologies. Currently, open-source tools for simulating GPS signals are available and can be used in the testing and evaluation of GPS receiver equipment. These tools can generate GPS signals that, when used by a GPS receiver, result in computation of a position solution that was pre-determined at the time of signal generation. That is, the signals produced are properly formed for the pre-determined location and result in the receiver reporting that position. This allows for a GPS receiver under test to be exposed to various simulated locations and conditions without having to be physically subjected to them. Additionally, while these signals are generated by a software simulation, they can be processed by real or software defined GPS receivers. This work utilizes the GPS-SDR-SIM software tool for GPS signal generation and while this tool does implement some sources of error that are inherent to GPS, it cannot inject multipath. GPS-SDR-SIM was modified in this effort to produce additional copies of signals with pre-determined delays. These additional delayed signals mimic multipath and represent what happens to GPS signals in the real world as they reflect off of surfaces and arrive at a receiver in place of or alongside the direct GPS signal. A successful proof of concept was prototyped and demonstrated using this modified version of GPS-SDR-SIM to produce simulated GPS signals as well as additional simulated multipath signals. The generated data was processed using a software defined GPS receiver and it was found that the introduction of simulated multipath signals successfully produced the expected characteristics of a composite multipath signal. Further maturation of this work could allow for the development of a GPS receiver testing and evaluation framework and aid in the development of multipath mitigating technologies.

GPS↗

QFw: A Quantum Framework for Large-scale HPC Ecosystems

This work extends Quantum Framework (QFw) by integrating it with Northwest Quantum Simulator (NWQ-Sim) and by introducing a lightweight python library that allows multiple frontends (e.g., Qiskit) to interact with QFw. This extension enables QFw to flexibly decouple frontends from backends (e.g., NWQ-Sim). We demonstrate this capability by executing a Greenberger-Horne-Zeilinger (GHZ) circuit using Qiskit and Pennylane with NWQ-Sim and Tensor-Network Quantum Virtual-Machine (TN-QVM). QFw enables easy scaling to multiple nodes. We showcase this with scaling tests using GHZ with up to 32 qubits for different number of nodes on the Frontier supercomputer. And, to demonstrate the use of QFw for real world problems, we solve a metamaterial optimization problem, using a Quantum Approximate Optimization Algorithm (QAOA). We observe that QFw over NWQ-Sim marginally improves Qiskit-aer’s accuracy in reaching the lowest energy state. These additions to QFw prepare it to run hybrid applications in a hybrid resource environment since it treats actual quantum hardware and simulators alike.

Chundury, Srikar↗

Spatial distribution of sp 3 defects in carbon fibers via time-of-flight secondary ion mass spectrometry

Defects play a significant role in the material properties of carbon fibers (CF). Several defects result in the formation of sp 3 bonds in an otherwise sp 2 -dominant graphitic structure. Understanding the distribution of these defects within CF provides insight into their properties and the effect of manufacturing conditions. Reports showed time-of-flight secondary ion mass spectrometry (ToF-SIMS) is capable of characterizing the spatial distribution of sp 2 and sp 3 content in carbon materials. Here, ToF-SIMS was utilized to investigate the spatial distribution of sp 3 defects in T700, T1000, and M46 CF. M46 had the lowest sp 3 content. Center-to-edge analysis revealed that T700 CF had a gradient of sp 3 defects starting from the center and increasing to the edge, whereas M46 CF had a sudden increase in sp 3 defects roughly 1 μm from the edge. Comparatively, T1000 CF had a relatively uniform radial distribution of sp 3 defects, except for a newly identified sp 2 rich region at 0.8 μm from the center. This is hypothesized to originate from a skin–core structure that forms during CF manufacturing. As a result, this work demonstrates the utility of ToF-SIMS for characterizing the spatial distribution of sp 3 defects within CF, establishing new ways to understand CF formation.

Carbon fibers↗

Tailoring the Physicochemical Properties of Nb Thin Films via Surface Engineering Methods

The modification of surface oxide layers formed on niobium (Nb) thin films via chemical mechanical planarization (CMP) and accelerated neutral atom beam (ANAB) processing provides a promising route toward tailoring their emergent properties and performance when used as superconducting qubits. Here, in this study, we show that CMP- and ANAB-formed Nb oxides are significantly thinner and smoother than the native oxide, as revealed by transmission electron microscopy (TEM) and atomic force microscopy. Scanning TEM and energy-dispersive X-ray spectroscopy along with X-ray photoelectron spectroscopy identified an oxidation gradient within the native and surface-engineered oxides. The topside layer is dominated by Nb 5+ (Nb 2 O 5 ), with various Nb suboxides present closer to the oxide/metal interface. Time-of-flight secondary ion mass spectrometry (ToF-SIMS) depth profiling confirmed the presence of an oxygen content gradient and demonstrated the enhanced resistance of the CMP- and ANAB-formed oxides to oxygen surface exchange and subsequent diffusion via 18 O 2 isotopic labeling experiments. ToF-SIMS also identified an interfacial layer containing trapped hydrogen (H)-containing species at the Nb oxide/metal interface. In situ ToF-SIMS and TEM revealed migration of the H/OH interfacial layer coinciding with decomposition of the surface oxide. Furthermore, our density functional theory calculations indicated that both H from moisture present in ambient air and bulk H in Nb films tend to segregate at the interface. These findings underscore the importance of understanding surface oxidation mechanisms, hydrogen incorporation, and their impact on the designed functionalities of Nb-based devices.

36 MATERIALS SCIENCE↗

The Spatial Distribution of Soluble Organic Matter and Their Relationship to Minerals in the Asteroid (162173) Ryugu

We performed in-situ analysis on a ~1 mm-sized grain A0080 returned by the Hayabusa2 spacecraft from near-Earth asteroid (162173) Ryugu to investigate the relationship of soluble organic matter (SOM) to minerals. Desorption electrospray ionization-high resolution mass spectrometry (DESI-HRMS) imaging mapped more than 200 CHN, CHO, CHO–Na (sodium adducted), and CHNO soluble organic compounds. A heterogeneous spatial distribution was observed for different compound classes of SOM as well as among alkylated homologues on the sample surface. The A0080 sample showed mineralogy more like an Ivuna-type (CI) carbonaceous chondrite than other meteorites. It contained two different lithologies, which are either rich (lithology 1) or poor (lithology 2) in magnetite, pyrrhotite, and dolomite. CHN compounds were more concentrated in lithology 1 than in lithology 2; on the other hand, CHO, CHO–Na, and CHNO compounds were distributed in both lithologies. Such different spatial distribution of SOM is likely the result of interaction of the SOM with minerals, during precipitation of the SOM via fluid activity, or could be due to difference in transportation efficiencies of SOMs in aqueous fluid. Organic-related ions measured by time-of-flight secondary ion mass spectrometry (ToF–SIMS) did not coincide with the spatial distribution revealed by DESI-HRMS imaging. This result may be because the different ionization mechanism between DESI and SIMS, or indicate that the ToF–SIMS data would be mainly derived from methanol-insoluble organic matter in A0080. In the Orgueil meteorite, such relationship between altered minerals and SOM distributions was not observed by DESI-HRMS analysis and field-emission scanning electron microscopy, which would result from differences of SOM formation processes and sequent alteration process on the parent bodies or even on the Earth. Alkylated homologues of CHN compounds were identified in A0080 by DESI-HRMS imaging as observed in the Murchison meteorite, but not from the Orgueil meteorite. These compounds with a large C number were enriched in Murchison fragments with abundant carbonate grains. In contrast, such relationship was not observed in A0080, implying different formation or growth mechanisms for the alkylated CHN compounds by interaction with fluid and minerals on the Murchison parent body and asteroid Ryugu.

Ryugu↗

The rate of extreme coronal line emitters in the Baryon Oscillation Spectroscopic Survey LOWZ sample

Extreme coronal line emitters (ECLEs) are a rare class of galaxy that exhibit strong, high-ionization iron coronal emission lines in their spectra. In some cases, these lines are transient and may be the result of tidal disruption event (TDEs). To test this connection, we calculate the rate of variable ECLEs (vECLEs) at redshift $\sim 0.3$. We search for ECLEs in the Baryon Oscillation Spectroscopic Survey (BOSS) LOWZ sample and discover two candidate ECLEs. Using follow-up spectra from the Dark Energy Spectroscopic Instrument and Gemini Multi-Object Spectrograph, and mid-infrared observations from the Wide-field Infrared Survey Explorer, we determine that one of these galaxies is a vECLE. Using this galaxy, we calculate the galaxy-normalized vECLE rate at redshift $\sim 0.3$ to be $R_\mathrm{G}=1.6~^{+3.8}_{-1.4}\times 10^{-6}~\mathrm{galaxy}^{-1}~\mathrm{yr}^{-1}$and the mass-normalized rate to be $R_\mathrm{M}=7~^{+16}_{-6}\times 10^{-18}~\mathrm{M_\odot ^{-1}}~\mathrm{yr}^{-1}$. This is then converted to a volumetric rate of $R_\mathrm{V}=1.8~^{+4.5}_{-1.5}\times 10^{-9}~\mathrm{Mpc}^{-3}~\mathrm{yr}^{-1}$. Formally, the LOWZ vECLE rates are $2 \!-\! 4$ times lower than the rates calculated from the Sloan Digital Sky Survey Legacy sample at redshift $\sim 0.1$. However, given the large uncertainties on both measurements, they are consistent with each other at $1\sigma$. Both the galaxy-normalized and volumetric rates are one to two orders of magnitude lower than TDE rates from the literature, consistent with vECLEs being caused by $5 \!-\! 20$ per cent of all TDEs.

79 ASTRONOMY AND ASTROPHYSICS↗

Statistical estimates of the binary properties of rotational variables

ABSTRACT We present a model to estimate the average primary masses, companion mass ranges, the inclination limit for recognizing a rotational variable, and the primary mass spreads for populations of binary stars. The model fits a population’s binary mass function distribution and allows for a probability that some mass functions are incorrectly estimated. Using tests with synthetic data, we assess the model’s sensitivity to each parameter, finding that we are most sensitive to the average primary mass and the minimum companion mass, with less sensitivity to the inclination limit and little to no sensitivity to the primary mass spread. We apply the model to five populations of binary spotted rotational variables identified in ASAS-SN, computing their binary mass functions using RV data from APOGEE. Their average primary mass estimates are consistent with our expectations based on their CMD locations ($\sim 0.75 \, {\rm M}_{\odot }$ for lower main sequence primaries and $\sim 0.9$–$1.2 \, {\rm M}_{\odot }$ for RS CVn and sub-subgiants). Their companion mass range estimates allow companion masses down to $M_2/M_1\simeq 0.1$, although the main sequence population may have a higher minimum mass fraction ($\sim 0.4$). We see weak evidence of an inclination limit $\gtrsim 50^{\circ }$ for the main sequence and sub-subgiant groups and no evidence of an inclination limit in the other groups. No groups show strong evidence for a preferred primary mass spread. We conclude by demonstrating that the approach will provide significantly better estimates of the primary mass and the minimum mass ratio and reasonable sensitivity to the inclination limit with 10 times as many systems.

Phillips, Anya (ORCID:000900051914974X)↗

The XRISM first-light observation: Velocity structure and thermal properties of the supernova remnant N 132D

Abstract We present an initial analysis of the X-Ray Imaging and Spectroscopy Mission (XRISM) first-light observation of the supernova remnant (SNR) N 132D in the Large Magellanic Cloud. The Resolve microcalorimeter has obtained the first high-resolution spectrum in the 1.6–10 keV band, which contains K-shell emission lines of Si, S, Ar, Ca, and Fe. We find that the Si and S lines are relatively narrow, with a broadening represented by a Gaussian-like velocity dispersion of $\sigma _v \sim 450$ km s$^{-1}$. However, the Fe He$\alpha$ lines are substantially broadened with $\sigma _v \sim 1670$ km s$^{-1}$. This broadening can be explained by a combination of the thermal Doppler effect due to the high ion temperature and the kinematic Doppler effect due to the SNR expansion. Assuming that the Fe He$\alpha$ emission originates predominantly from the supernova ejecta, we estimate the reverse shock velocity at the time when the bulk of the Fe ejecta were shock heated to be $-1000 \lesssim V_{\rm rs}$ (km s$^{-1}$) $\lesssim 3300$ (in the observer frame). We also find that Fe Ly$\alpha$ emission is redshifted with a bulk velocity of $\sim 890$ km s$^{-1}$, substantially larger than the radial velocity of the local interstellar medium surrounding N 132D. These results demonstrate that high-resolution X-ray spectroscopy is capable of providing constraints on the evolutionary stage, geometry, and velocity distribution of SNRs.

individual objects↗

In-orbit performance of the soft X-ray imaging telescope Xtend aboard XRISM

Here, we present a summary of the in-orbit performance of the soft X-ray imaging telescope Xtend onboard the X-Ray Imaging and Spectroscopy Mission (XRISM), based on in-flight observation data, including first-light celestial objects, calibration sources, and results from the cross-calibration campaign with other currently operating X-ray observatories. XRISM/Xtend has a large field of view of ${38{^{\prime }_{.}}5}$ $\times$ ${38{^{\prime }_{.}}5}$, covering an energy range of 0.4–13 keV, as demonstrated by the first-light observation of the galaxy cluster Abell 2319. It also features an energy resolution of 170–180 eV at 6 keV, which meets the mission requirement and enables us to resolve He-like and H-like Fe K$\alpha$ lines. Throughout the observation during the performance verification phase, we confirm that two issues identified in the Soft X-ray Imager (SXI) onboard the previous Hitomi mission—light leakage and crosstalk events—are addressed and suppressed in the case of Xtend. A joint cross-calibration observation of the bright quasar 3C 273 results in an effective area measured to be $\sim$420 cm$^{2}$ at1.5 keV and $\sim$310 cm$^{2}$ at 6.0 keV, which matches values obtained in ground tests. We also continuously monitor the health of Xtend by analyzing overclocking data, calibration source spectra, and day-Earth observations; the readout noise is stable and low, and contamination is negligible even one year after launch. A low background level compared with other major X-ray instruments onboard satellites, combined with the largest grasp ($\Omega _{\rm eff}\sim 60$ cm$^2$ deg$^2$) of Xtend, will not only support Resolve analysis, but also enable significant scientific results on its own. This includes near-future follow-up observations and transient searches in the context of time-domain and multi-messenger astrophysics.

instrumentation: detectors: Xtend↗

XRISM view of a stellar flare: High-resolution Fe K spectra of HR 1099, an RS CVn-type star

A high-resolution X-ray spectroscopic observation was made of the RS CVn-type binary star HR 1099 using the Resolve instrument onboard XRISM for its calibration purposes. During the $\sim$400 ks telescope time covering 1.5 binary orbit, a flare lasting for $\sim$100 ks was observed with a released X-ray radiation energy of ${\sim }10^{34}$ erg, making it the first stellar flare ever observed with an X-ray microcalorimeter spectrometer. The flare peak count rate is 6.4 times higher than that in quiescence and is distinguished clearly in time thanks to the long telescope time. Many emission lines were detected in the 1.7–10 keV range both in the flare and quiescent phases. Using the high spectral resolution of Resolve in the Fe K band (6.5–7.0 keV), we resolved the inner-shell lines of Fe XIX-XXVI as well as the outer-shell lines of Fe XXV-XXVI . These lines have peaks in the contribution functions at different temperatures over a wide range, allowing us to construct the differential emission measure (DEM) distribution over the electron temperature of 1–10 keV (roughly 10–100 MK) based only on Fe lines, thus without an assumption of the elemental abundance. The reconstructed DEM has a bimodal distribution, and only the hotter component increased during the flare. The elemental abundance was derived based on the DEM distribution thus constructed. A significant abundance increase was observed during the flare for Ca and Fe, which are some of the elements with the lowest first ionization potential among those analyzed, but not for Si, S, and Ar. This behavior is seen in some giant solar flares and the present result is a clear example in stellar flares.

Astronomy and AstroPhysics↗

Lie-algebraic classical simulations for quantum computing

The classical simulation of quantum dynamics plays an important role in our understanding of quantum complexity and in the development of quantum technologies. Efficient techniques such as those based on the Gottesman-Knill theorem for Clifford circuits, tensor networks for low entanglement-generating circuits, or Wick's theorem for fermionic Gaussian states have become central tools in quantum computing. In this work, we contribute to this body of knowledge by presenting a framework for classical simulations, dubbed “𝔤-sim”, which is based on the underlying Lie algebraic structure of the dynamical process. When the dimension of the algebra grows at most polynomially in the system size, there exist observables for which the simulation is efficient. Indeed, we show that 𝔤-sim enables new regimes for classical simulations, is able to deal with certain forms of noise in the evolution, as well as can be used to tackle several paradigmatic variational and nonvariational quantum computing tasks. For the former, we perform Lie-algebraic simulations to train and optimize parametrized quantum circuits (thus effectively showing that some variational models can be dequantized), design enhanced parameter initialization strategies, solve tasks of quantum circuit synthesis, and train a quantum-phase classifier. For the latter, we report large-scale noiseless and noisy simulations on benchmark problems. By comparing the limitations of 𝔤-sim and certain Wick's theorem-based simulations, we find that the two methods become inefficient for different types of states or observables, hinting at the existence of distinct, nonequivalent resources for classical simulation.

97 MATHEMATICS AND COMPUTING↗

An FPGA-based hardware accelerator supporting sensitive sequence homology filtering with profile hidden Markov models

Abstract Background Sequence alignment lies at the heart of genome sequence annotation. While the BLAST suite of alignment tools has long held an important role in alignment-based sequence database search, greater sensitivity is achieved through the use of profile hidden Markov models (pHMMs). Here, we describe an FPGA hardware accelerator, called HAVAC, that targets a key bottleneck step (SSV) in the analysis pipeline of the popular pHMM alignment tool, HMMER. Results The HAVAC kernel calculates the SSV matrix at 1739 GCUPS on a $$\sim$$ ∼ $3000 Xilinx Alveo U50 FPGA accelerator card, $$\sim$$ ∼ 227× faster than the optimized SSV implementation in nhmmer . Accounting for PCI-e data transfer data processing, HAVAC is 65× faster than nhmmer’s SSV with one thread and 35× faster than nhmmer with four threads, and uses $$\sim$$ ∼ 31% the energy of a traditional high end Intel CPU. Conclusions HAVAC demonstrates the potential offered by FPGA hardware accelerators to produce dramatic speed gains in sequence annotation and related bioinformatics applications. Because these computations are performed on a co-processor, the host CPU remains free to simultaneously compute other aspects of the analysis pipeline.

59 BASIC BIOLOGICAL SCIENCES↗