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DOE OSTI2026

Advancing Concentrating Solar Thermal Modeling Using System Advisor Model (SAM)

Concentrating solar thermal (CST) technologies play a critical role in enabling dispatchable power and high-temperature industrial heat applications. Accurate and flexible modeling tools are essential for evaluating system performance, guiding technology research and development, and informing investment decisions. The National Laboratory of the Rockies's System Advisor Model (SAM) is a widely used techno-economic simulation platform for CST systems, providing detailed performance and financial modeling capabilities for multiple CST system configurations. SAM integrates physics-based performance models with financial analysis to simulate the behavior of complex energy systems under realistic operating conditions. For CST technologies (including tower, parabolic trough, and linear Fresnel), SAM enables hourly simulations using site-specific weather data that ensure feasible operating conditions and convergence of mass and energy between core system components (i.e., solar field, receiver, thermal energy storage, and power cycle). These capabilities allow researchers and developers to evaluate annual energy production, capacity factors, levelized cost of energy (LCOE), and system dispatch strategies. A key advantage of SAM lies in its flexibility for parametric analysis and large-scale computational studies. Users can vary system design parameters such as heliostat field layout, receiver dimensions, thermal energy storage capacity, power block sizing, and installation cost assumptions to investigate their impact on system performance and financial metrics. When combined with automated scripting through LK, SDKTool, or Python interfaces, SAM enables high-throughput simulation workflows that support sensitivity analysis, technology benchmarking, and optimization studies. These approaches are particularly valuable for next-generation CST concepts, where design spaces are large and system interactions are complex. Another important capability of SAM is its support for dispatch optimization and thermal energy storage modeling, which are central to the value proposition of CST technologies. The ability to simulate integrated storage and flexible power generation allows researchers to explore strategies that maximize grid value, improve capacity utilization, and enhance integration with variable resources such as photovoltaic and wind generation. This poster will present an overview of SAM's thermal system modeling capabilities including concentrating solar. Additionally, we will highlight new feature developments including: 1) implementing Google's OR-Tools optimization platform for faster and more robust dispatch optimization, 2) developing a new power load following controller for modeling behind-the-meter applications, 3) enabling direct modeling of CSP-PV hybrid systems with the inclusion of battery storage, and 4) developing a multi-receiver falling particle Gen3 system model.

14 SOLAR ENERGY↗

DOE OSTI2016

B-Trees and Cache-Oblivious B-Trees with Different-Sized Atomic Keys

Most B-tree articles assume that all $\textit{N}$ keys have the same size $\textit{K}$, that $\textit{f = B/K}$ keys fit in a disk block, and therefore that the search cost is $O(\text{log}_{f+1}N) $ block transfers. When keys have variable size, B-tree operations have no nontrivial performance guarantees, however. This article provides B-tree-like performance guarantees on dictionaries that contain keys of different sizes in a model in which keys must be stored and compared as opaque objects. The resulting atomic-key dictionaries exhibit performance bounds in terms of the average key size and match the bounds when all keys are the same size. Atomic-key dictionaries can be built with minimal modification to the B-tree structure, simply by choosing the pivot keys properly. Further, this article describes both static and dynamic atomic-key dictionaries. In the static case, if there are $\textit{N}$ keys with average size $\textit{K}$, the search cost is $O(\lceil K/B\rceil \text{log}_{1 + \lceil K/B\rceil} N)$ expected transfers. It is not possible to transform these expected bounds into worst-case bounds. The cost to build the tree is $\textit{O(NK)}$ operations and $\textit{O(NK/B)}$ transfers if all keys are presented in sorted order. If not, the cost is the sorting cost. For the dynamic dictionaries, the amortized cost to insert a key $\textit{κ}$ of arbitrary length at an arbitrary rank is dominated by the cost to search for $\textit{κ}$. Specifically, the amortized cost to insert a key $\textit{κ}$ of arbitrary length and random rank is $O(\lceil K/B\rceil log_{1+ \lceil B/K\rceil } N + |κ|/B)$ transfers. A dynamic-programming algorithm is shown for constructing a search tree with minimal expected cost. This article also gives a cache-oblivious static atomic-key B-tree, which achieves the same asymptotic performance as the static B-tree dictionary, mentioned previously. A cache-oblivious data structure or algorithm is not parameterized by the block size $\textit{B}$ or memory size $\textit{M}$ in the memory hierarchy; rather, it is universal, working simultaneously for all possible values of $\textit{B}$ or $\textit{M}$. On a machine with block size $\textit{B}$, if there are $\textit{N}$ keys with average size $\textit{K}$, search operations costs $O(\lceil K/B \rceil log_{1+ \lceil B/K \rceil} N)$ block transfers in expectation. This cache-oblivious layout can be built in $\textit{O(N}\text{log}\textit{(NK))}$ processor operations.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2023

Update to the Microcontroller Benchmark for Radiation Testing

LANL developed a benchmark of software code for radiation testing of microprocessors several years ago, and it was published under an open-source license on GitHub. Publishing the software is necessary for other researchers to adopt and implement this benchmark for radiation testing of other microprocessors to standardize test practices so that test data can be compared across different microprocessors. The original codes have been used several times by other organizations to test a wide range of microcontrollers and microprocessors. After several years of research, LANL is ready to update the benchmark. Changes include: 1. Addition of new codes that allow common software codes to be tested, 2. Addition of new codes that instrument more microprocessor circuitry, 3. Addition of input patterns that allow for a more compressive understanding of how the memory layout affects the sensitivity to radiation-induced faults and better use of automated test pattern generation standards, and 4. Modification of current codes for faster and more resilient detection, reporting and correction of radiation-induced faults. These codes have been tested by LANL researchers over the last few years, which has been published in the open literature. As the code base for the new benchmarks are stable, it is time to release the update to the GitHub repository, where the original codes were released.

Quinn, Heather↗

DOE OSTI2018

Dark energy survey operations: years 4 and 5

The Dark Energy Survey is a “stage III” dark energy experiment, performing an optical imaging survey to measure cos-mological equation of state parameters using four independent methods. The scope and complexity of the survey, originallyscheduled for 525 nights of observing spread over five years and combining a 5000 degree wide survey with a 10 field weeklytime-domain survey, introduced complex strategic and tactical scheduling problems that needed to be addressed. We beginwith an overview of the process used to develop DES strategy and tactics, from the inception of the project, to task forces thatstudied and developed strategy changes over the course of the survey, to the nightly pre-observing meeting in which imme-diate tactical issues were addressed. We then summarize the strategic choices made for each sub-survey, including metrics,scheduling considerations, choice of time domain fields and their sequences of exposures, and wide survey footprint andpointing layout choices. We go on to describe the detailed process that determined which specific exposures were taken atwhich specific times. We give a chronology of the strategic and tactical peculiarities of each year of observing, including theproposal and execution of a sixth year. We give an overview ofobstac, the implementation of the DES scheduler used to sim-ulate and evaluate strategic and tactical options, and automate exposure scheduling; and describe developments inobstacfor use after DES. Appendices describe further details of data quality evaluation,τ, andteff; airmass calculation; and model-ing of the seeing and sky brightness. The significant corpus of DES data indicates that the simple scaling relations for seeingas a function of wavelength and airmass derived from the Kolmogorov turbulence model work adequately for exposureplanning purposes: deviations from these relations are modest in comparison with short time-scale seeing variations

Gruendl, Robert A.↗

DOE OSTI2020

The Cost of Floating Offshore Wind Energy in California Between 2019 and 2032

California’s energy planning is centered around meeting the emissions reduction and renewable energy requirements of Senate Bill 350 by 2030. However, state power system planning is expected to eventually address California’s requirement to achieve 100% of total retail electricity sales from renewable energy and zero-carbon resources by 2045, as mandated by Senate Bill 100. To comply with these directives, California needs to investigate the further development of energy efficiency, storage, and a diverse range of renewable energy, zero-carbon emission, and transmission resources, including offshore wind. Wind resources off the coast of California have the potential to generate a significant portion of the state’s electric energy as it moves toward a zero-carbon economy and can help diversify its energy mix. Floating offshore wind technology, which is suitable for the deep waters along the California coast, is currently in a precommercial phase, with approximately 84 megawatts (MW) installed worldwide at the end of 2019. Globally there are over 7,000 MW in planning and permitting phases of development, with the first commercial-scale projects expected to be operational in 2024. This study provides site-specific cost and performance data for floating offshore wind to inform California’s long-term energy planning. The identification of new resources to meet California’s policy goals at least cost is part of the Integrated Resource Planning (IRP) process, which is coordinated by the California Public Utilities Commission (CPUC). In 2019–2020 IRP modeling, offshore wind was included for the first time as a candidate resource in some sensitivity cases (CPUC 2019). The data and information presented in this report can be used to update offshore wind inputs in future IRP cycles. The authors conducted a geospatial cost analysis over portions of the offshore wind resource area of California. The analyzed spatial domain includes sites with a mean wind speed of at least 7 meters per second and water depths between 40 meters (m) and 1,300 m. Costs and energy production vary across this analysis domain. We calculated these parameters on a grid layout with over 750 sites, with each site representing a 1,000-MW commercial offshore wind power plant. Levelized cost of energy (LCOE) was calculated at each site over the analysis domain. The resulting variation in LCOE across the analysis domain is illustrated through heat maps in this report. Five study areas were selected within the analysis domain where more detailed cost analysis was conducted and cost parameters, such as annual energy production, capital cost expenditures (CapEx), operational cost expenditures (OpEx), and net capacity factors are reported. These five study areas include Morro Bay, Diablo Canyon, Humboldt, Cape Mendocino and Del Norte.

17 WIND ENERGY↗

DOE OSTI2017

Exploring performance and energy tradeoffs for irregular applications: A case study on the Tilera many-core architecture

High performance, parallel applications with irregular data accesses are becoming a critical workload class for modern systems. In particular, the execution of such workloads on emerging many-core systems is expected to be a significant component of applications in data mining, machine learning, scientific computing and graph analytics. However, power and energy constraints limit the capabilities of individual cores, memory hierarchy and on-chip interconnect of such systems, thus leading to architectural and software trade-os that must be understood in the context of the intended application’s behavior. Irregular applications are notoriously hard to optimize given their data-dependent access patterns, lack of structured locality and complex data structures and code patterns. We have ported two irregular applications, graph community detection using the Louvain method (Grappolo) and high-performance conjugate gradient (HPCCG), to the Tilera many-core system and have conducted a detailed study of platform-independent and platform-specific optimizations that improve their performance as well as reduce their overall energy consumption. To conduct this study, we employ an auto-tuning based approach that explores the optimization design space along three dimensions - memory layout schemes, GCC compiler flag choices and OpenMP loop scheduling options. We leverage MIT’s OpenTuner auto-tuning framework to explore and recommend energy optimal choices for different combinations of parameters. We then conduct an in-depth architectural characterization to understand the memory behavior of the selected workloads. Finally, we perform a correlation study to demonstrate the interplay between the hardware behavior and application characteristics. Using auto-tuning, we demonstrate whole-node energy savings and performance improvements of up to 49:6% and 60% relative to a baseline instantiation, and up to 31% and 45:4% relative to manually optimized variants.

auto tuning↗

DOE OSTI2012

3D neutronic/thermal-hydraulic coupled analysis of MYRRHA

The current tendency in multiphysics calculations applied to reactor physics is the use of already validated computer codes, coupled by means of an iterative approach. In this paper such an approach is explained concerning neutronics and thermal-hydraulics coupled analysis with MCNPX and COBRA-IV codes using a driver program and file exchange between codes. MCNPX provides the neutronic analysis of heterogeneous nuclear systems, both in critical and subcritical states, while COBRA-IV is a subchannel code that can be used for rod bundles or core thermal-hydraulics analysis. In our model, the MCNP temperature dependence of nuclear data is handled via pseudo-material approach, mixing pre-generated cross section data set to obtain the material with the desired cross section temperature. On the other hand, COBRA-IV has been updated to allow for the simulation of liquid metal cooled reactors. The coupled computational tool can be applied to any geometry and coolant, as it is the case of single fuel assembly, at pin-by-pin level, or full core simulation with the average pin of each fuel-assembly. The coupling tool has been applied to the critical core layout of the SCK-CEN MYRRHA concept, an experimental LBE cooled fast reactor presently in engineering design stage. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

DOE OSTI2016

MDSplus quality improvement project

MDSplus is a data acquisition and analysis system used worldwide predominantly in the fusion research community. Development began 29 years ago on the OpenVMS operating system. Since that time there have been many new features added and the code has been ported to many different operating systems. There have been contributions to the MDSplus development from the fusion community in the way of feature suggestions, feature implementations, documentation and porting to different operating systems. The bulk of the development and support of MDSplus, however, has been provided by a relatively small core developer group of three or four members. Given the size of the development team and the large number of users much more effort was focused on providing new features for the community than on keeping the underlying code and documentation up to date with the evolving software development standards. To ensure that MDSplus will continue to provide the needs of the community in the future, the MDSplus development team along with other members of the MDSplus user community has commenced on a major quality improvement project. The planned improvements include changes to software build scripts to better use GNU Autoconf and Automake tools, refactoring many of the source code modules using new language features available in modern compilers, using GNU MinGW-w64 to create MS Windows distributions, migrating to a more modern source code management system, improvement of source documentation as well as improvements to the www.mdsplus.org web site documentation and layout, and the addition of more comprehensive test suites to apply to MDSplus code builds prior to releasing installation kits to the community. This paper should lead to a much more robust product and establish a framework to maintain stability as more enhancements and features are added. Finally, this paper will describe these efforts that are either in progress or planned for the near future.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2019

Building Towards Discovery: Preparing for New Physics at the LHC [Final papers]

Particle physics today is at a crossroads. The Standard Model (SM) has survived four decades of experimental scrutiny and spurred multiple landmark discoveries, culminating with the 2012 discovery of the Higgs boson at the Large Hadron Collider (LHC). Yet we know that this model is incomplete. We live in a universe dominated by matter and energy unaccounted for by the SM– and the Higgs boson itself is improbably light. It falls to the current generation of high-energy physicists to go beyond the model and enter a new era of discovery. Andeen is leading a new research group at the University of Texas at Austin (UT-Austin) that is endeavoring to reveal novel physical phenomena through the discovery of new particles with the ATLAS detector at the LHC. A key element of our experience thus far has been collaborating closely with theorists to identify both interesting new physics models. In addition we work closely with electrical engineers in detector development. Our approach is therefore unique in its integration of theory, analysis and instrumentation, and is encapsulated in a three-pronged strategy. First is the essential task of analyzing our rapidly expanding dataset. I am directing my group in searches for vector-like quarks (VLQs). Should they exist, these hypothetical particles would indicate physics scenarios beyond the SM. Experimental constraints suggest VLQs decay preferentially to a third generation quark and a Higgs, W or Z boson. Today at 13 TeV, both multi-lepton (electron and muon) and jet substructure signatures are sensitive to identifying the VLQ decay products. The large Run 2 dataset (collected through 2018) of up to 150 fb -1 will allow us to simultaneously use multi-lepton signatures with jet-substructure in searches for new physics. UT-Austin is well positioned to be a leader in this area. Prof. P. Onyisi’s postdoctoral researchers and graduate students are searching for ttH signatures in three- and four-lepton channels and we benefit from their experience. We are also aided by the availability of the Texas Advanced Computing Center, which provides us with easy access to several high performance computing (HPC) systems. My previous experience in VLQ searches propels the work today. I have published both the first investigation into the single production of top partners (signatures of composite Higgs Models) of any LHC experiment 1 as well as one of the first analyses utilizing jet-substructure techniques to search for the single production of vector-like quarks. 2 Adding to this is my group’s work with the Liquid Argon (LAr) calorimeter, the primary instrument we use in detecting electrons. Second, my group is contributing to the operations of the LAr calorimeter while preparing to install and commission new electronic hardware (the Phase 1 upgrade) to this crucial component of the ATLAS detector. I have played a leading role in the development of a critical, radiation-hard, high-speed Analog-to-Digital Convertor (ADC) that is essential inselecting data collected by the LAr calorimeter. 3 This upgrade will improve the e!ciency with which we can select events in our detector. Postdoctoral researcher N. Nikiforou (based at CERN May 2016 onward) and graduate students (one based at CERN from the start of 2018 onward, with one additional graduate students from summer 2018) are growing our already deep experience in the operation of the LAr calorimeter to prepare for installation and commissioning of the new trigger readout in 2018-2019. My group will then be positioned to be the first to exploit the potential of the improved triggers in our multi-lepton searches for new physics. Third, a suite of preparations for a major detector upgrade, scheduled to be completed in 2024, are underway. My group is building hardware that will improve the electronic readout of the ATLAS detector. I am partnering with a group in the Electrical and Computer Engineering (ECE) Department at UT-Austin (Prof. N. Sun) to employ his work at the cutting edge of ADC research. We will support an ECE grad student for the layout of this design, and collaborate with engineering groups at Nevis Laboratory and the Electrical Engineering Department (Prof. P. Kinget) at Columbia University to integrate our ADC with gain selection circuits. We will provide this critical component of the ASIC at the challenging boundary of the analog and digital signals in the LAr calorimeter readout chain. Furthermore UT-Austin will lead the testing of this device during development and production (approximately 55,000 four-channel chips). This effort compliments my work as the deliverables manager for the LAr front-end ASICs for the US ATLAS HL-LHC project and strengthens the US commitment to that upgrade.In so doing, my group at the UT-Austin will be at the forefront of efforts to probe the structure of the universe to an unmatched degree both at the current LHC and with its future upgrades. Through both the ongoing analysis of data at the ATLAS detector and improvements to the detector itself, an answer to what lies beyond the SM may come within our grasp. My background in instrumentation and analysis allows my group to establish a singular research effort on the ATLAS experiment. In addition to answering fundamental questions about the subatomic world, the technologies developed could advance the broader scientific community and result in valuable spin-offs.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2019

Dark Energy Survey’s Observation Strategy, Tactics, and Exposure Scheduler

The Dark Energy Survey is a “stage III” dark energy experiment, performing an optical imaging survey to measure cosmological equation of state parameters using four independent methods. The scope and complexity of the survey, originally scheduled for 525 nights of observing spread over five years and combining a 5000 degree wide survey with a 10 field weekly time-domain survey, introduced complex strategic and tactical scheduling problems that needed to be addressed. We begin with an overview of the process used to develop DES strategy and tactics, from the inception of the project, to task forces that studied and developed strategy changes over the course of the survey, to the nightly pre-observing meeting in which immediate tactical issues were addressed. We then summarize the strategic choices made for each sub-survey, including metrics, scheduling considerations, choice of time domain fields and their sequences of exposures, and wide survey footprint and pointing layout choices. We go on to describe the detailed process that determined which specific exposures were taken at which specific times. We give a chronology of the strategic and tactical peculiarities of each year of observing, including the proposal and execution of a sixth year. We give an overview of obstac, the implementation of the DES scheduler used to simulate and evaluate strategic and tactical options, and automate exposure scheduling; and describe developments in obstac for use after DES. Appendices describe further details of data quality evaluation, t, and teff; airmass calculation; and modeling of the seeing and sky brightness. The significant corpus of DES data indicates that the simple scaling relations for seeing as a function of wavelength and airmass derived from the Kolmogorov turbulence model work adequately for exposure planning purposes: deviations from these relations are modest in comparison with short time-scale seeing variations.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2021

Cloud Droplet Measurement System for the ARM Tethered Balloon System (TBS) Field Campaign Report

The Mesa Photonics' cloud droplet measurement system (CDMS) performs in situ measurement of droplet size distribution and droplet number density in clouds. These characteristics are important cloud microphysical properties that are critical input parameters for atmospheric models and are also useful for proper calibration and validation of performance of other atmospheric measurement instrumentation. This small campaign was the first project (out of two) that involved integration of the CDMS into the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) user facility’s tethered balloon system (TBS) and its initial testing at the ARM Southern Great Plains (SGP) atmospheric observatory. The follow-up campaign (AFC07016) involved testing of the CDMS under relevant conditions at the third ARM Mobile Facility (AMF3) at Oliktok Point, Alaska and making in situ measurements in clouds. The goal of this small field campaign was to deploy the CDMS on the ARM TBS, demonstrate its integrity and compatibility with the TBS, and test the wireless telecommunication system in preparation for subsequent in-cloud measurements at ARM’s North Slope of Alaska (NSA) observatory at Utqiagvik (formerly Barrow). The specific technical objectives included: (1) Integration of the Mesa Photonics' CDMS into the ARM TBS, (2) testing of the wireless telecommunication system of the CDMS, (3) evaluating the data acquisition software and image processing algorithms especially under high-background-illumination conditions, and (4) testing the ruggedness of the instrument's optical alignment and other performance characteristics. All objectives have been successfully met. The mounting hardware was designed and built mostly at Sandia National Laboratories (SNL), which allowed reliable mounting of the CDMS on the TBS and co-locating the CDMS with other instruments. The field tests were performed by the principal investigator (PI) in collaboration with the TBS operational crew led by D. Dexheimer. The field testing demonstrated good compatibility of the CDMS with the TBS. During the TBS flights, the crew did not experience any operational issues with the CDMS. The instrument demonstrated reliable operational characteristics, including sufficient battery life and good thermal management. The wireless telecommunication system has been successfully tested at TBS flight altitudes of up to 1000 m. During all flights, the CDMS raw data were wirelessly transmitted to the ground station and processed in real time. The ruggedness of the instrument's optical alignment was evaluated by performing calibration of the CDMS (using Mesa Photonics' fixed-size monodisperse droplet generator) before and after the campaign. The calibration was stable within the instrument's measurement precision. In summary, the campaign demonstrated good compatibility of the Mesa Photonics' CDMS with the ARM TBS. The flight tests confirmed the mechanical integrity of the CDMS and stability of its optical layout, as well as reliability of the wireless telecommunication system. Successful completion of this campaign provided a solid basis for the next campaign (AFC07016, November 2020), that involved testing of the CDMS during in-cloud TBS flights at AMF3 at Oliktok Point.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2016

FY 2016 Status Report: Documentation of All CIRFT Data including Hydride Reorientation Tests (Draft M2)

The first portion of this report provides a detailed description of fiscal year (FY) 2015 test result corrections and analysis updates based on FY 2016 updates to the Cyclic Integrated Reversible-Bending Fatigue Tester (CIRFT) program methodology, which is used to evaluate the vibration integrity of spent nuclear fuel (SNF) under normal conditions of transport (NCT). The CIRFT consists of a U-frame test setup and a real-time curvature measurement method. The three-component U-frame setup of the CIRFT has two rigid arms and linkages connecting to a universal testing machine. The curvature SNF rod bending is obtained through a three-point deflection measurement method. Three linear variable differential transformers (LVDTs) are clamped to the side connecting plates of the U-frame and used to capture deformation of the rod. The second portion of this report provides the latest CIRFT data, including data for the hydride reorientation test. The variations in fatigue life are provided in terms of moment, equivalent stress, curvature, and equivalent strain for the tested SNFs. The equivalent stress plot collapsed the data points from all of the SNF samples into a single zone. A detailed examination revealed that, at the same stress level, fatigue lives display a descending order as follows: H. B. Robinson Nuclear Power Station (HBR), LMK, and mixed uranium-plutonium oxide (MOX). Just looking at the strain, LMK fuel has a slightly longer fatigue life than HBR fuel, but the difference is subtle. The third portion of this report provides finite element analysis (FEA) dynamic deformation simulation of SNF assemblies . In a horizontal layout under NCT, the fuel assembly’s skeleton, which is formed by guide tubes and spacer grids, is the primary load bearing apparatus carrying and transferring vibration loads within an SNF assembly. These vibration loads include interaction forces between the SNF assembly and the canister basket walls. Therefore, the integrity of the guide tubes and spacer grids critically affects the vibration intensity of the fuel assembly during transport and must be considered when developing the multipurpose purpose canister (MPC) design for safe SNF transport.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

DOE OSTI2020

RNAcentral 2021: secondary structure integration, improved sequence search and new member databases

RNAcentral is a comprehensive database of non-coding RNA (ncRNA) sequences that provides a single access point to 44 RNA resources and >18 million ncRNA sequences from a wide range of organisms and RNA types. RNAcentral now also includes secondary (2D) structure information for >13 million sequences, making RNAcentral the world’s largest RNA 2D structure database. The 2D diagrams are displayed using R2DT, a new 2D structure visualization method that uses consistent, reproducible and recognizable layouts for related RNAs. The sequence similarity search has been updated with a faster interface featuring facets for filtering search results by RNA type, organism, source database or any keyword. This sequence search tool is available as a reusable web component, and has been integrated into several RNAcentral member databases, including Rfam, miRBase and snoDB. To allow for a more fine-grained assignment of RNA types and subtypes, all RNAcentral sequences have been annotated with Sequence Ontology terms. The RNAcentral database continues to grow and provide a central data resource for the RNA community. RNAcentral is freely available at https://rnacentral.org.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2018

Internal protein motions in molecular-dynamics simulations of Bragg and diffuse X-ray scattering

Molecular-dynamics (MD) simulations of Bragg and diffuse X-ray scattering provide a means of obtaining experimentally validated models of protein conformational ensembles. This paper shows that compared with a single periodic unit-cell model, the accuracy of simulating diffuse scattering is increased when the crystal is modeled as a periodic supercell consisting of a 2 × 2 × 2 layout of eight unit cells. The MD simulations capture the general dependence of correlations on the separation of atoms. There is substantial agreement between the simulated Bragg reflections and the crystal structure; there are local deviations, however, indicating both the limitation of using a single structure to model disordered regions of the protein and local deviations of the average structure away from the crystal structure. Although it was anticipated that a simulation of longer duration might be required to achieve maximal agreement of the diffuse scattering calculation with the data using the supercell model, only a microsecond is required, the same as for the unit cell. Rigid protein motions only account for a minority fraction of the variation in atom positions from the simulation. The results indicate that protein crystal dynamics may be dominated by internal motions rather than packing interactions, and that MD simulations can be combined with Bragg and diffuse X-ray scattering to model the protein conformational ensemble.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2026

Automatic Lane-Level Road Network Extraction from Aerial Imagery for Transportation Digital Twins

Accurate road networks are essential for credible traffic microsimulation and transportation digital twins, yet high-definition maps are often difficult to obtain due to limited availability, high cost, or proprietary restrictions. Some build networks from crowdsourced data, such as OpenStreetMap, but these sources often contain geometric and semantic inconsistencies. Others create networks manually, a process that is labor-intensive and difficult to scale. To address these limitations, this work presents an end-to-end pipeline that automatically extracts georeferenced, lane-level road networks from publicly available high-resolution satellite imagery and converts them into simulation-ready assets. The developed end-to-end pipeline has three primary modules: (1) A computer-vision-based module first detects directed lane geometries and intersection layouts. (2) A heuristic-based topology construction module then identifies approach and exit legs and establishes conflict-free lane-to-lane connections. (3) Finally, an automatic simulation-building module converts the extracted network into standard formats, e.g., OpenDRIVE, and generates routable SUMO networks. The framework supports both complete network construction from scratch and local-scale refinement of existing networks through lane-count correction, transition recovery, and geometric regularization. The proposed pipeline provides a practical pathway to generate traffic simulation networks from satellite imagery, significantly reducing manual reconstruction effort and enabling scalable, continuously updated transportation digital twins.

Guo, Hetian [University of Georgia, Athens] (ORCID↗

DOE OSTI2021

The curled wake model: a three-dimensional and extremely fast steady-state wake solver for wind plant flows

Abstract. Wind turbine wake models typically require approximations, such as wake superposition and deflection models, to accurately describe wake physics. However, capturing the phenomena of interest, such as the curled wake and interaction of multiple wakes, in wind power plant flows comes with an increased computational cost. To address this, we propose a new hybrid method that uses analytical solutions with an approximate form of the Reynolds-averaged Navier–Stokes equations to solve the time-averaged flow over a wind plant. We compare results from the solver to supervisory control and data acquisition data from the Lillgrund wind plant obtaining wake model predictions which are generally within 1 standard deviation of the mean power data. We perform simulations of flow over the Columbia River Gorge to demonstrate the capabilities of the model in complex terrain. We also apply the solver to a case with wake steering, which agreed well with large-eddy simulations. This new solver reduces the time – and therefore the related cost – it takes to simulate a steady-state wind plant flow (on the order of seconds using one core). Because the model is computationally efficient, it can also be used for different applications including wake steering for wind power plants and layout optimization.

17 WIND ENERGY↗

DOE OSTI2023

Soft error-mitigating semiconductor design system and associated methods

A soft error-mitigating semiconductor design system and associated methods that tailor circuit design steps to mitigate corruption of data in storage elements (e.g., flip flops) due to Single Events Effects (SEEs). Required storage elements are automatically mapped to triplicated redundant nodes controlled by a voting element that enforces majority-voting logic for fault-free output (i.e., Triple Modular Redundancy (TMR)). Storage elements are also optimally positioned for placement in keeping with SEE-tolerant spacing constraints. Additionally, clock delay insertion (employing either a single global clock or clock triplication) in the TMR specification may introduce useful skew that protects against glitch propagation through the designed device. The resultant layout generated from the TMR configuration may relax constraints imposed on register transfer level (RTL) engineers to make rad-hard designs, as automation introduces TMR storage registers, memory element spacing, and clock delay/triplication with minimal designer input.

Miryala, Sandeep↗

DOE OSTI2024

Soft error-mitigating semiconductor design system and associated methods

Miryala, Sandeep↗