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DOE OSTI2022

A Search for Sterile-Neutrino-Based Muon Neutrino Disappearance Using the MicroBooNe Deep Learning Analysis

We describe a search for νµ disappearance using the MicroBooNE Deep Learning analysis 1µ1p selection. Presently, the unexplained MiniBooNE and LSND anomalies could be explained by a sterile neutrino impacting neutrino oscillations. Our analysis searches for the allowed parameter space that could describe such a sterile neutrino. We determine the allowed and excluded region of a 3+1 sterile-based muon neutrino disappearance model in MicroBooNE at 90% confidence. Our allowed region includes both the null model, and current global best fit model. Context for the underlying Deep Learning analysis is provided and several validation studies surrounding both the disappearance search, and originating 1µ1p selection are performed to strengthen confidence in the result. In addition, a next-generation deep learning tool for cosmic-ray-muon event discrimination is proposed and evaluated, demonstrating a removal of 70% of the remaining event background when added to current methods, under the cut criteria used.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2022

A Search for Sterile-Neutrino-Based Muon Neutrino Disappearance Using the MicroBooNe Deep Learning Analysis

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2025

Cloud Feedback Uncertainty in the Equatorial Pacific Across CMIP6 Models

Cloud feedback is the largest uncertainty in estimating Equilibrium Climate Sensitivity. In this study we focus on the equatorial Pacific, where CMIP6 model cloud feedback spread is notably large. Cloud radiative effects in this region are relevant for the global climate. Our findings show that models predict a consistent shift towards the ascent regime in response to El Nino-like sea surface warming. Models diverge in terms of the radiative impact due to differences in cloud characteristics in ascent and subsidence regimes. Using the observed relationship between circulation regime and cloud radiative effect, we find a reduction in the regional mean cloud feedback estimate from 0.77 to 0.22 W m -2 K -1 , though this does not substantially lessen the model spread in total feedback. Pathways to reduce this spread include: improving confidence in the regional ocean warming pattern, and using observations and models to understand cloud type and circulation interactions.

CMIP6↗

DOE OSTI2024

The key role of forest disturbance in reconciling estimates of the northern carbon sink

Northern forests are an important carbon sink, but our understanding of the driving factors is limited due to discrepancies between dynamic global vegetation models (DGVMs) and atmospheric inversions. We show that DGVMs simulate a 50% lower sink (1.1 ± 0.5 PgC yr –1 over 2001–2021) across North America, Europe, Russia, and China compared to atmospheric inversions (2.2 ± 0.6 PgC yr –1 ). We explain why DGVMs underestimate the carbon sink by considering how they represent disturbance processes, specifically the overestimation of fire emissions, and the lack of robust forest demography resulting in lower forest regrowth rates than observed. We reconcile net sink estimates by using alternative disturbance-related fluxes. We estimate carbon uptake through forest regrowth by combining satellite-derived forest age and biomass maps. We calculate a regrowth flux of 1.1 ± 0.1 PgC yr –1 , and combine this with satellite-derived estimates of fire emissions (0.4 ± 0.1 PgC yr –1 ), land-use change emissions from bookkeeping models (0.9 ± 0.2 PgC yr –1 ), and the DGVM-estimated sink from CO 2 fertilisation, nitrogen deposition, and climate change (2.2 ± 0.9 PgC yr –1 ). The resulting ‘bottom-up’ net flux of 2.1 ± 0.9 PgC yr –1 agrees with atmospheric inversions. The reconciliation holds at regional scales, increasing confidence in our results.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2025

Evaluating probabilistic deep learning methods for uncertainty quantification of temperature downscaling

Deep learning (DL) has emerged as a promising tool for downscaling coarse-resolution climate data to high-resolution outputs, enabling improved regional climate predictions. A critical aspect of DL-based downscaling is the incorporation of uncertainty quantification (UQ), which enhances the interpretability and reliability of predictions—key factors for climate risk assessment and decision-making. This study develops a DL model to downscale 2 m temperature across the contiguous United States using reanalysis datasets. We systematically evaluate three epistemic UQ methods—deep ensembles (DEns), Monte Carlo dropout (MCD), and Flipout—based on their probabilistic accuracy, downscaling performance, sensitivity to geographical features, and computational efficiency. Results indicate that MCD generally outperforms Flipout and DEns in terms of calibration and downscaling accuracy. However, DEns demonstrate lower calibration errors in coastal regions, indicating its higher confidence within these areas. Flipout, in contrast, is more sensitive to elevation gradients and exhibits higher calibration errors in mountainous regions. Hence, the choice of UQ method for this task depends on the specific requirements of the application. For applications that prioritize overall calibration, downscaling accuracy, and computational efficiency, MCD is a strong candidate. These findings highlight the importance of selecting UQ methods based on application-specific requirements, such as geographical context and computational constraints. By addressing the trade-offs between UQ methods, this study provides actionable insights for improving the reliability, scalability, and utility of DL-based downscaling in climate science.

Environmental sciences↗

DOE OSTI2025

Dual-Baseline Search for Active-to-Sterile Neutrino Oscillations in NOvA

We report a search for neutrino oscillations to sterile neutrinos under a model with three active and one sterile neutrinos (3+1 model). This analysis uses the NOvA detectors exposed to the NuMI beam, running in neutrino mode. The data exposure, 13.6 × 10 20 protons on target, doubles that previously analyzed by NOvA, and the analysis is the first to use 𝜈 𝜇 charged-current interactions in conjunction with neutral-current interactions. Neutrino samples in the near and far detectors are fitted simultaneously, enabling the search to be carried out over a Δ⁢𝑚$^{2}_{41}$ range extending 2 (3) orders of magnitude above (below) 1 eV 2 . NOvA finds no evidence for active-to-sterile neutrino oscillations under the 3+1 model at 90% confidence level. New limits are reported in multiple regions of parameter space, excluding some regions currently allowed by IceCube at 90% confidence level. We additionally set the most stringent limits for anomalous 𝜈 𝜏 appearance for Δ⁢𝑚$^{2}_{41}$ ≤ 3 eV 2 .

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

DOE OSTI2024

Search for a Sub-eV Sterile Neutrino Using Daya Bay’s Full Dataset

This Letter presents results of a search for the mixing of a sub-eV sterile neutrino with three active neutrinos based on the full data sample of the Daya Bay Reactor Neutrino Experiment, collected during 3158 days of detector operation, which contains 5.55 × 106 reactor $\overline{v}$ e candidates identified as inverse beta-decay interactions followed by neutron capture on gadolinium. The analysis benefits from a doubling of the statistics of our previous result and from improvements of several important systematic uncertainties. No significant oscillation due to mixing of a sub-eV sterile neutrino with active neutrinos was found. Exclusion limits are set by both Feldman-Cousins and CLs methods. Light sterile neutrino mixing with sin 2⁡ 2⁢θ 14 ≳ 0.01 can be excluded at 95% confidence level in the region of 0.01 eV 2 ≲ |Δ⁢$m$$^{2}_{41}$| ≲ 0.1 eV 2 . This result represents the world-leading constraints in the region of 2 × 10 –4 eV 2 ≲ |Δ⁢$m$$^{2}_{41}$| ≲ 0.2 eV 2 .

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2024

Nonphotochemical quenching kinetics GWAS in sorghum identifies genes that may play conserved roles in maize and Arabidopsis thaliana photoprotection

SUMMARY Photosynthetic organisms must cope with rapid fluctuations in light intensity. Nonphotochemical quenching (NPQ) enables the dissipation of excess light energy as heat under high light conditions, whereas its relaxation under low light maximizes photosynthetic productivity. We quantified variation in NPQ kinetics across a large sorghum ( Sorghum bicolor ) association panel in four environments, uncovering significant genetic control for NPQ. A genome‐wide association study (GWAS) confidently identified three unique regions in the sorghum genome associated with NPQ and suggestive associations in an additional 61 regions. We detected strong signals from the sorghum ortholog of Arabidopsis thaliana Suppressor Of Variegation 3 ( SVR3 ) involved in plastid–nucleus signaling. By integrating GWAS results for NPQ across maize ( Zea mays ) and sorghum‐association panels, we identified a second gene, Non‐yellowing 1 ( NYE1 ), originally studied by Gregor Mendel in pea ( Pisum sativum ) and involved in the degradation of photosynthetic pigments in light‐harvesting complexes. Analysis of nye1 insertion alleles in A. thaliana confirmed the effect of this gene on NPQ kinetics in eudicots. We extended our comparative genomics GWAS framework across the entire maize and sorghum genomes, identifying four additional loci involved in NPQ kinetics. These results provide a baseline for increasing the accuracy and speed of candidate gene identification for GWAS in species with high linkage disequilibrium.

Plant Sciences↗

DOE OSTI2023

Storylines for unprecedented heatwaves based on ensemble boosting

Recent temperature extremes have shattered previously observed records, reaching intensities that were inconceivable before the events. Could the possibility of an event with such unprecedented intensity as the 2021 Pacific Northwest heatwave have been foreseen, based on climate model information available before the event? Could the scientific community have quantified its potential intensity based on the current generation of climate models? Here, we demonstrate how an ensemble boosting approach can be used to generate physically plausible storylines of a heatwave hotter than observed in the Pacific Northwest. We also show that heatwaves of much greater intensities than ever observed are possible in other locations like the Greater Chicago and Paris regions. In order to establish confidence in storylines of ‘black swan’-type events, different lines of evidence need to be combined along with process understanding to make this information robust and actionable for stakeholders.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2020

Preliminary Enhanced LAW Glass Formulation Algorithm

This report summarizes the Preliminary Enhanced LAW Glass Formulation Algorithm, its background information, and the calculations it performs. The Preliminary Enhanced LAW Glass Formulation Algorithm is a tool that has been developed in MATLAB to formulate glass at a given a waste composition, while attempting to maximize waste loading. It is intended for use at the Hanford Waste Treatment and Immobilization Plant, where nuclear waste will be vitrified into glass for safe, long-term storage. The formulated glass is required to meet several processing and product quality constraints. In addition, calculations must account for associated uncertainties in constraint prediction and measurement. The algorithm also allows for the ability to hold glass compositions closer to tested regions in order to increase confidence in the output. The algorithm must also follow nuclear quality assurance procedures and submit to rigorous validation and verification testing.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2022

Soil Carbonyl Sulfide (OCS) Fluxes in Terrestrial Ecosystems: An Empirical Model

Measurements of carbonyl sulfide (OCS) enable independent estimates of regional stomatal conductance provided that non-stomatal OCS fluxes are well constrained. OCS is taken up through plant leaves, following the same pathway as CO 2 ; in contrast to CO 2 , OCS is irreversibly destroyed in plant leaves and plants do not typically exhibit OCS emissions. Ecosystem uptake of OCS can indicate changes in stomatal opening. Here we present an empirical model to assess the potential impact of soil OCS exchange, the non-Stomatal OCS exchange Empirical Model (SOCSEM, version 0). We created biome-specific response curves characterizing soil OCS exchange and restricted the model design to require only knowledge of soil moisture and surface temperature because remote sensing observations are available for these two features. Comparing the model to field-based chamber observations reveal deviations that can be attributed to missing complexity of the ground surface (having excluded litter and plants without regulated stomata), shortwave radiation, or the soil environment. For agricultural regions with known net emissions, we use remotely-sensed surface temperature data and demonstrate that data resolution can affect anticipated fluxes. We further investigate the influence of regions with unknown soil OCS responses, for example, Arctic tundra. We compare our model to a process-based and respiration-based soil OCS exchange model that has been implemented in a land surface model. Further field study of tropical and arctic ecosystems in conjunction with studies of non-stomatal surfaces in addition to soil (e.g., bryophytes) will increase confidence in applying OCS as a regional tracer for stomatal conductance.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Conservation of Dry Air, Water, and Energy in CAM and Its Potential Impact on Tropical Rainfall

Abstract For the Community Atmosphere Model version 6 (CAM6), an adjustment is needed to conserve dry air mass. This adjustment exposes an inconsistency in how CAM6’s energy budget incorporates water—in CAM6 water in the vapor phase has energy, but condensed phases of water do not. When water vapor condenses, only its latent energy is retained in the model, while its remaining internal, potential, and kinetic energy are lost. A global fixer is used in the default CAM6 model to maintain global energy conservation, but locally the energy tendency associated with water changing phase violates the divergence theorem. This error in energy tendency is intrinsically tied to the water vapor tendency, and reaches its highest values in regions of heavy rainfall, where the error can be as high as 40 W m −2 annually averaged. Several possible changes are outlined within this manuscript that would allow CAM6 to satisfy the divergence theorem locally. These fall into one of two categories: 1) modifying the surface flux to balance the local atmospheric energy tendency and 2) modifying the local atmospheric tendency to balance the surface plus top-of-atmosphere energy fluxes. To gauge which aspects of the simulated climate are most sensitive to this error, the simplest possible change—where condensed water still does not carry energy and a local energy fixer is used in place of the global one—is implemented within CAM6. Comparing this experiment with the default configuration of CAM6 reveals precipitation, particularly its variability, to be highly sensitive to the energy budget formulation. Significance Statement This study examines and explains spurious regional sources and sinks of energy in a widely used climate model. These energy errors result from not tracking energy associated with water after it transitions from the vapor phase to either liquid or ice. Instead, the model used a global fixer to offset the energy tendency related to the energy sources and sinks associated with condensed water species. We replace this global fixer with a local one to examine the model sensitivity to the regional energy error and find a large sensitivity in the simulated hydrologic cycle. This work suggests that the underlying thermodynamic assumptions in the model should be revisited to build confidence in the model-simulated regional-scale water and energy cycles.

Harrop, Bryce E.↗

DOE OSTI2024

Search for Neutral Heavy Scalars in ttZ Events Using 13 TeV pp Collisions at CMS

This thesis presents a search for a heavy pseudoscalar particle, A, which decays into a lighterscalar, H, and a Z boson within the Two-Higgs-Doublet Model (2HDM). We focus on Zboson decays to leptons, with H decays into a t t ̄ pair. The search uses the Asimov dataset–a theoretical dataset generated to predict the expected results for discovery and exclusion based on conditions from proton-proton collisions at the LHC, atintegrated luminosity of 138f b−1, as recorded by the CMS detector. The analysis focuses on events with three charged leptons, two of which come from the Z boson decay and one from a top quark decay. The expected results suggest the search has high sensitivity, showing discovery potential across much of the 2HDM Type-II parameter space, with possible deviations from the Standard Model background exceeding 5σ significance. The search sets upper limits on the cross-section times branching ratio, assuming narrow particle widths, for A masses up to 2100 GeV and H masses up to 1900 GeV. The results are interpreted in the 2HDM Type-II framework to exclude certain regions of parameter space at the 95% confidence level as a function of particle masses and variables such as tanβ and cos(β−α). The findings highlight the potential reach implications of future search in this parameter region.

Rudrabhatla, Sahithi [Illinois U., Chicago]↗

DOE OSTI2022

Improved AlphaFold modeling with implicit experimental information

Machine-learning prediction algorithms such as AlphaFold and RoseTTAFold can create remarkably accurate protein models, but these models usually have some regions that are predicted with low confidence or poor accuracy. We hypothesized that by implicitly including new experimental information such as a density map, a greater portion of a model could be predicted accurately, and that this might synergistically improve parts of the model that were not fully addressed by either machine learning or experiment alone. An iterative procedure was developed in which AlphaFold models are automatically rebuilt on the basis of experimental density maps and the rebuilt models are used as templates in new AlphaFold predictions. We show that including experimental information improves prediction beyond the improvement obtained with simple rebuilding guided by the experimental data. This procedure for AlphaFold modeling with density has been incorporated into an automated procedure for interpretation of crystallographic and electron cryo-microscopy maps.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2022

Putting AlphaFold models to work with phenix.process_predicted_model and ISOLDE

AlphaFold has recently become an important tool in providing models for experimental structure determination by X-ray crystallography and cryo-EM. Large parts of the predicted models typically approach the accuracy of experimentally determined structures, although there are frequently local errors and errors in the relative orientations of domains. Importantly, residues in the model of a protein predicted by AlphaFold are tagged with a predicted local distance difference test score, informing users about which regions of the structure are predicted with less confidence. AlphaFold also produces a predicted aligned error matrix indicating its confidence in the relative positions of each pair of residues in the predicted model. The phenix.process_predicted_model tool downweights or removes low-confidence residues and can break a model into confidently predicted domains in preparation for molecular replacement or cryo-EM docking. These confidence metrics are further used in ISOLDE to weight torsion and atom–atom distance restraints, allowing the complete AlphaFold model to be interactively rearranged to match the docked fragments and reducing the need for the rebuilding of connecting regions.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2021

A Distinct Atmospheric Mode for California Precipitation

The hydrologic cycle in California is strongly influenced by wet-season (November–April) precipitation. Here, we demonstrate the existence of an influential mode of North Pacific atmospheric pressure variability that regulates wet-season precipitation variability over both northern and southern California. This mode, named as the “California precipitation mode” (CPM), is statistically distinct from other well-known modes of pressure variability such as the Pacific-North American pattern. In addition to controlling wet-season mean precipitation, positive days of the CPM coincide with up to 90% of the extreme (>99th percentile) precipitation days and 76% of detected atmospheric rivers (ARs) days, while the negative days correspond with 60% of the dry days. CMIP6 models capture the CPM remarkably well, including its statistical separation from the other well-known modes of pressure variability. The models also reproduce the CPM's strong association with California wet-season precipitation, giving confidence in the models’ dynamics relating to regional hydrologic extremes. However, the models also exhibit biases in regional hydrologic extremes. The CPM is a useful way to understand the origins of those biases and select the more credible models for further analysis: Models with unrealistically strong gradients in the CPM pressure pattern generally oversimulate larger wet extremes and produce excessively long dry intervals in the historical period. Thus the hydrologic biases can be traced to the particular aspects of North Pacific atmospheric dynamics.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2025

New Constraints on Axionlike Particles with the NEON Detector at a Nuclear Reactor

We report new constraints on axionlike particles (ALPs) using data from the NEON experiment, which features 16.7 kg of NaI(Tl) target located 23.7 m from a 2.8 GW thermal power nuclear reactor. Analyzing a total exposure of 3063 kg · day , with 1596 kg · day during reactor-on and 1467 kg · day during reactor-off periods, we compared energy spectra to search for ALP-induced signals. No significant signal was observed, enabling us to set exclusion limits at the 95% confidence level. These limits probe previously unexplored regions of the ALP parameter space, particularly for axion masses ( m a ) near 1 MeV / c 2 . For ALP-photon coupling ( g a γ ), limits reach as low as 6.24 × 10 − 6 GeV − 1 at m a = 3.0 MeV / c 2 , while for ALP-electron coupling ( g a e ), limits reach 4.95 × 10 − 8 at m a = 1.02 MeV / c 2 . This Letter demonstrates the potential for future reactor experiments to probe unexplored ALP parameter space. Published by the American Physical Society 2025

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2020

Multiscale-Informed Modeling of High Temperature Component Response with Uncertainty Quantification

This report summarizes a joint effort between Argonne National Laboratory, Idaho National Laboratory, and Los Alamos National Laboratory to develop and deploy constitutive models targeted at predicting the life of Grade 91 alloy components subjected to high temperature environments typical of those that structural components in advanced nuclear reactors would experience. Two distinct, but complementary constitutive modeling approaches have been taken here. The first employs a phenomenological viscoplastic model for which parameters have been calibrated based on experimental data for a wide range of Grade 91 alloy that has undergone a variety of processing. A Bayesian approach was used to derive distributions of uncertain parameters for this model based on this data set. The second approach is a reduced order model suitable for engineering-scale analysis that is based on the results of a large set of mesoscale simulations. Mesoscale models allow for the microstructure and composition of a particular alloy to be directly taken into account in the computation of the viscoplastic response, but are computationally expensive, which makes it impractical to directly call those models for the material constitutive response in an engineering-scale simulation. The reduced-order representation of the response of the underlying model used here allows for an engineering-scale model to take into account the characteristics of the underlying microstructure, while only incurring a reasonable computational expense. Both of these approaches have different strengths, and are applicable for different parts of the design/analysis process. The phenomenological models can be readily parameterized based on a set of experimental data for a given class of materials and used for scoping calculations. Once a specific material is chosen and adequately characterized, the reduced order models can accurately predict the response of that specific alloy, and because the models are based on predictive models of the underlying microstructure, they can be used to more confidently predict the response under conditions in regions where there is limited experimental data. Both of these models have been integrated in the Grizzly code, which is used here to perform proof-of-concept uncertainty quantification analyses of a simple component under prototypical conditions. The built- in stochastic analysis capabilities in the MOOSE framework that Grizzly is built on are used here to run large sets of simulations for this uncertainty quantification analysis. As would be expected, because the reduced order models are developed for a much more tightly defined alloy, they predict tighter distributions of the time to failure than the phenomenological models, which are calibrated to a broader set of data. Also important is that these simulations demonstrate that a reduced order modeling approach can be successfully deployed to propagate uncertainties from the material scale to practical engineering-scale component simulations.

42 ENGINEERING↗