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At least 37 records · Page 2

Nutrient Cycle Impacts on Forest Ecosystem Carbon Cycling: Improved Prediction of Climate Feedbacks from Coupled C–Nutrient Dynamics from Ecosystem to Regional Scales

One of the largest sources of uncertainty in the projected global mean temperature response to anthropogenic carbon (C) emissions is the role of the land surface in contributing to or mediating the rise in atmospheric CO2 [IPCC, 2007]. Development of ecosystem processes in global land surface models (LSMs) is far from complete, with major components such as the nitrogen (N) cycle only recently being implemented in some LSMs [Thornton et al., 2007; Sokolov et al., 2008; Xu-Ri and Prentice, 2008; Fisher et al., 2010]. Inclusion of the N cycle can reduce terrestrial C uptake by up to ~50 Pg C·y-1 globally [Figure 1: Fisher et al., 2010]. However, even these early representations of the N cycle in LSMs are missing critical plant–soil interactions that have been shown empirically to exert a major influence over ecosystem C fluxes. Here we propose to use a newly developed plant N model by PI Fisher as a theoretical and analytical framework for integrating novel field-based methods and long-term flux observations to quantify the impacts of belowground processes on fluxes of C, water and energy, from ecosystem to regional scales. Although the model (Fixation & Uptake of Nitrogen: FUN) is one of the more advanced global plant N models available, the model is dependent on theoretical C flux curves optimizing plant C allocation to root exudates, symbiotic bacteria and fungi, and retranslocation enzymes that have not been confirmed or validated with measurements—primarily because the measurement techniques had not been available, until recently. Parallel to the model developments by Fisher et al. were developments in in situ direct measurement techniques by Phillips et al. [2008; 2011], who were able to measure C fluxes from roots to soil. Not only do these techniques have the capacity to confirm and/or modify the modeling components in the Fisher et al. plant N model, but they also provide insight into how belowground C supply from roots couples the C–N cycles at the micro-site and ecosystem scales. Collectively, the integration of measurements and modeling provides empirical grounding for theoretical process behavior. Three critical components will enable us to successfully carry out this research: I) new methodological approaches developed by co-I Phillips for in situ measurement of root exudates, and belowground C fluxes that allow for testing and refinement of FUN [Phillips et al., 2008; Phillips et al., 2011]; II) an innovative research design that involves data integration across an ecological gradient, including a DOE-supported AmeriFlux tower operated by co-I Dragoni, which is essential to determining the ecosystem flux impacts [Dragoni et al., 2011]; and, III) new results from co-I Evans showing unique spectral signatures of trees in association with ectomycorrhizae (ECM) and arbuscular mycorrhizae (AM) fungi from Landsat data using spectral mixture analysis (SMA), which is key to scaling up belowground processes to regional scales [Andersson et al., 2009]. Each component provides feedback to and is intimately linked with all other components; no part operates in isolation. Our team and approach combines expertise in modeling, remote sensing, ecosystem ecology, plant physiology, soil biogeochemistry, and micrometeorology to address these inherently interdisciplinary problems and questions. This proposal directly responds to the focused Science Area of the FOA: “The role of belowground processes and mechanisms across scales (e.g., soil carbon transformation, root dynamics, mycorrhizal interactions, and plant mediated (e.g., root exudates) biogeochemical transformations) associated with a changing climate.

54 ENVIRONMENTAL SCIENCES↗

Impacts of droughts and extreme-temperature events on gross primary production and ecosystem respiration: a systematic assessment across ecosystems and climate zones

Extreme climatic events, such as droughts and heat stress, induce anomalies in ecosystem–atmosphere CO 2 fluxes, such as gross primary production (GPP) and ecosystem respiration (R eco ), and, hence, can change the net ecosystem carbon balance. However, despite our increasing understanding of the underlying mechanisms, the magnitudes of the impacts of different types of extremes on GPP and R eco within and between ecosystems remain poorly predicted. Here we aim to identify the major factors controlling the amplitude of extreme-event impacts on GPP, R eco , and the resulting net ecosystem production (NEP). We focus on the impacts of heat and drought and their combination. We identified hydrometeorological extreme events in consistently downscaled water availability and temperature measurements over a 30-year time period. We then used FLUXNET eddy covariance flux measurements to estimate the CO 2 flux anomalies during these extreme events across dominant vegetation types and climate zones. Overall, our results indicate that short-term heat extremes increased respiration more strongly than they downregulated GPP, resulting in a moderate reduction in the ecosystem's carbon sink potential. In the absence of heat stress, droughts tended to have smaller and similarly dampening effects on both GPP and R eco and, hence, often resulted in neutral NEP responses. The combination of drought and heat typically led to a strong decrease in GPP, whereas heat and drought impacts on respiration partially offset each other. Taken together, compound heat and drought events led to the strongest C sink reduction compared to any single-factor extreme. A key insight of this paper, however, is that duration matters most: for heat stress during droughts, the magnitude of impacts systematically increased with duration, whereas under heat stress without drought, the response of R eco over time turned from an initial increase to a downregulation after about 2 weeks. This confirms earlier theories that not only the magnitude but also the duration of an extreme event determines its impact. Our study corroborates the results of several local site-level case studies but as a novelty generalizes these findings on the global scale. Specifically, we find that the different response functions of the two antipodal land–atmosphere fluxes GPP and R eco can also result in increasing NEP during certain extreme conditions. Apparently counterintuitive findings of this kind bear great potential for scrutinizing the mechanisms implemented in state-of-the-art terrestrial biosphere models and provide a benchmark for future model development and testing.

54 ENVIRONMENTAL SCIENCES↗

DVMDOSTEM v0.8.3: a terrestrial ecosystem model designed to represent arctic, boreal and permafrost ecosystem dynamics

The impacts of climate change on natural ecosystems are the result of complex physical and ecological processes operating and interacting at a variety of spatio-temporal scales, that can be represented in process-based ecosystem models. DVMDOSTEM is an advanced process-based terrestrial ecosystem model (TEM) designed to study ecosystem responses to climate changes and disturbances. It has a particular focus on permafrost regions (i.e. regions characterized by soils that stay partially frozen all year round for at least two consecutive years), encompassing boreal, arctic, and alpine landscapes. The model couples two previous versions of the Terrestrial Ecosystem Model (TEM) (McGuire et al., 1992): DVMTEM that includes a dynamic vegetation module (DVM) (E. S. Euskirchen et al., 2009), and DOSTEM that includes a dynamic organic soil module (DOS) (H. Genet et al., 2013; Yi et al., 2010). DVMDOSTEM simulates processes at yearly and monthly scales, with some physical processes operating at an even finer temporal resolution. Its versatility allows for site-specific to regional simulations, making it valuable for predicting shifts in permafrost, vegetation, and carbon (C) and nitrogen (N) dynamics. While DVMDOSTEM has been described in the methods sections of many manuscripts, this paper is the first stand alone description of DVMDOSTEM, independent of a particular scientific investigation.

Carman, Tobey B. [Univ. of Alaska, Fairbanks, AK (↗

An Evolutionary Computation System Design Concept for Developing Controlled Closed Ecosystems: An Intelligent Systems Approach to Foster Gravitational Ecosystem Research for Developing Sustainable Communities in Space and on Earth

An adjustably-autonomous intelligent systems approach for developing Closed Ecosystems (CESs) is presented, which includes a design concept and preliminary design details for the Controlled Closed-Ecosystem Development System (CCEDS) and the Orbiting Modular Artificial-Gravity Spacecraft (OMAGS). The paper is divided into three sections: CESs, the CCEDS Design Concept, and Orbiting Fractional-Gravity Closed Ecosystems OMAGS design concept. The first section briefly describes Closed EcoSystems (CESs), complex adaptive systems, biomes, microbial microbiomes, and their relevance for the study of astrobiology. This section also discusses initial efforts in the development of Closed Environment Life Support Systems (CELSSs) for sustainable communities in space and on Earth. This section concludes with a discussion of the bioregenerative life support system challenge of and the corresponding consequences due to the inverse relationship of the very small human biomass/non-human biomass ratio overall on the Earth with respect to the extremely large human biomass/non-human-biomass ratio found in cities and the International Space Station. The second section describes the CCEDS design concept, which consists of a population of controlled colonies of CES Modules (CESMs), each an integrated CES, continually generating data for an intelligent system that operates the CESs and their CESMs. A variety of CESM types and their use are briefly described. The CCEDS intelligent system uses an evolutionary computation algorithm described in this section to develop and optimize these CESs to increase their viability duration and the size of the animals they support with the ultimate goal to support populations of humans, both on Earth and in space. The CCEDS architecture, its five control subsystems, and its five evolutionary computation levels are also discussed. The section concludes with a discussion of several CCEDS design strategies. The third section summarizes the OMAGS design concept for a spacecraft with a payload consisting of CESs in an orbiting spacecraft centrifuge that operates for at least 5 years. The spacecraft concept is described including its 150cm-radius centrifuge with a 2 ton & 3,000 liter bioscience payload capacity for 24 CESMs. The centrifuge design has four physical levels for its CESMs, each level subject to a different fractional gravity level. This section presents the spacecraft benefits of being designed and operated such that the spacecraft and payload centrifuge wheel counter-rotate resulting in net zero angular momentum and zero gyroscopic forces. Artificial-gravity generation by centripetal acceleration is also discussed. This section concludes by showing the external specifications of the CESMs and their layout in the centrifuge, followed by discussing the multi-payload module rationale. In tandem, the CCEDS and OMAGS systems can be used to foster gravitational ecosystem research for developing sustainable communities in space and on Earth.

Dorais, Gregory A.↗

Direct and indirect effects of climatic variations on the interannual variability in net ecosystem exchange across terrestrial ecosystems

Our study indicates that climatic variables not only directly affect the interannual variability (IAV) in net ecosystem exchange of CO 2 (NEE) but also indirectly drive it by changing the physiological parameters. Identifying these direct and indirect paths can reveal the underlying mechanisms of carbon (C) dynamics. In this study, we applied a path analysis using flux data from 65 sites to quantify the direct and indirect climatic effects on IAV in NEE and to evaluate the potential relationships among the climatic variables and physiological parameters that represent physiology and phenology of ecosystems. We found that the maximum photosynthetic rate was the most important factor for the IAV in gross primary productivity (GPP), which was mainly induced by the variation in vapour pressure deficit. For ecosystem respiration (RE), the most important drivers were GPP and the reference respiratory rate. The biome type regulated the direct and indirect paths, with distinctive differences between forests and non-forests, evergreen needleleaf forests and deciduous broadleaf forests, and between grasslands and croplands. Different paths were also found among wet, moist and dry ecosystems. However, the climatic variables can only partly explain the IAV in physiological parameters, suggesting that the latter may also result from other biotic and disturbance factors. In addition, the climatic variables related to NEE were not necessarily the same as those related to GPP and RE, indicating the emerging difficulty encountered when studying the IAV in NEE. Overall, our results highlight the contribution of certain physiological parameters to the IAV in C fluxes and the importance of biome type and multi-year water conditions, which should receive more attention in future experimental and modelling research.

54 ENVIRONMENTAL SCIENCES↗

Increasing methane emissions from natural land ecosystems due to sea-level rise

Because methane (CH4) is currently the second most important greenhouse gas, it is important to accurately quantify CH4 emissions from terrestrial ecosystems. Different from many current modelling studies which focus on how CH4 emissions respond to a variety of environmental factors in land ecosystems, we analyzed how methane emitted from lands responded to sea-level increase (SLR) in this study. To do so, a large-scale surface water routing module was incorporated into our existing CH4 model and we designed an efficient simulation protocol to capture small variations in inundation extent due to SLR. Both the annual maximum inundation extent and CH4 emissions showed a steadily growing trend, increasing 1.21 × 105 km2 and 3.13 Tg CH4 /yr globally, respectively, in a 22-year SLR experiment during 1993-2014. Most of new inundation and methane source areas were located near rivers’ deltas and along the downstream reaches of rivers. The increase in inundation extent is primarily influenced by precipitation, channel geomorphic characteristics and topography of riverside area. The growth of CH4 emissions due to the SLR is largely determined by inundation extent but other factors such as temperature and carbon storage also played the important roles. Although the current SLR-induced increases in inundation extent and CH4 emissions only accounted for 1.0% and 1.3% of their global totals, they took 7.0% and 17.3% of the mean annual variability in both, respectively, during the study period. Considering SLR has a long-term but stable increasing trend, future SLR under potential climate change could play a more important role in evaluating dynamic of CH4 emissions.

Lu, Xiaoliang↗

EcoFAB: Advancing microbiome science through standardized fabricated ecosystems

The vital role microbiomes play in ecosystems and for human health is now apparent. Great progress has been made by using model systems to gain insight into host-microbe interactions, yet lack of standardized reproducible experimental systems and methods greatly limits microbiome science. Recent successes highlight the importance of developing these types of systems to deconstruct mechanisms mediating host-microbe interactions. Standardization of ‘fabricated ecosystems’ would enable detailed mechanistic interrogation and more effective knowledge transfer between researchers – analogous to the significant impact model organisms and cell systems have had in molecular and cell biology. To advance these efforts we advocate for strategies and overarching themes to enable communities of scientists to work together to develop standardized laboratory microbial consortia for studying host-associated microbiomes.

Zengler, Karsten↗

Drainage enhances modern soil carbon contribution but reduces old soil carbon contribution to ecosystem respiration in tundra ecosystems

Abstract Warming temperatures are likely to accelerate permafrost thaw in the Arctic, potentially leading to the release of old carbon previously stored in deep frozen soil layers. Deeper thaw depths in combination with geomorphological changes due to the loss of ice structures in permafrost, may modify soil water distribution, creating wetter or drier soil conditions. Previous studies revealed higher ecosystem respiration rates under drier conditions, and this study investigated the cause of the increased ecosystem respiration rates using radiocarbon signatures of respired CO 2 from two drying manipulation experiments: one in moist and the other in wet tundra. We demonstrate that higher contributions of CO 2 from shallow soil layers (0–15 cm; modern soil carbon) drive the increased ecosystem respiration rates, while contributions from deeper soil (below 15 cm from surface and down to the permafrost table; old soil carbon) decreased. These changes can be attributed to more aerobic conditions in shallow soil layers, but also the soil temperature increases in shallow layers but decreases in deep layers, due to the altered thermal properties of organic soils. Decreased abundance of aerenchymatous plant species following drainage in wet tundra reduced old carbon release but increased aboveground plant biomass elevated contributions of autotrophic respiration to ecosystem respiration. The results of this study suggest that drier soils following drainage may accelerate decomposition of modern soil carbon in shallow layers but slow down decomposition of old soil carbon in deep layers, which may offset some of the old soil carbon loss from thawing permafrost.

Kwon, Min Jung↗

Green Ocean Amazon 2014/15 Terrestrial Ecosystem Project (Geco). Field Campaign Report

In conjunction with the U.S. Department of Energy (DOE)’s Atmospheric Radiation Measurement (ARM) Climate Research Facility GoAmazon campaign, the Terrestrial Ecosystem Science (TES)-funded Green Ocean Amazon (GoAmazon 2014/15) terrestrial ecosystem project (Geco) was designed to: evaluate the strengths and weaknesses of leaf-level algorithms for biogenic volatile organic compounds (BVOCs) emissions in Amazon forests near Manaus, Brazil, and conduct mechanistic field studies to characterize biochemical and physiological processes governing leaf- and landscape-scale tropical forest BVOC emissions, and the influence of environmental drivers that are expected to change with a warming climate.

54 ENVIRONMENTAL SCIENCES↗

The DIARieS Ecosystem – A Software Ecosystem to Simplify Discovery, Implementation, Analysis, Reproducibility, and Sharing of Scientific Results and Environments in Heliophysics

The infrastructure of the Heliophysics discipline has promising components but with several missing gaps, drastically reducing research and development efficiency. Developing an online discovery and analysis software ecosystem will close several of these gaps. The five main focuses on this ecosystem should be Discovery, Implementation, Analysis, Reproducibility, and Sharing of results (DIARieS). In this paper, we give a detailed description of how the proposed software ecosystem should operate, and point out the large range of possible applications to benefit many disparate groups, such as researchers, operational staff, decision-makers, and educators. The infrastructure components and technological capabilities necessary for its completion are either currently available or in development, making such an ecosystem possible for the first time. One main focus of current infrastructure investments must be to adapt and connect these pieces together into a cohesive whole to increase our research and development efficiency.

infrastructure↗

Climate controls over the net carbon uptake period and amplitude of net ecosystem production in temperate and boreal ecosystems

The seasonal and interannual variability of the terrestrial carbon cycle is regulated by the interactions of climate and ecosystem function. However, the key factors and processes determining the interannual variability of net ecosystem productivity (NEP) in different biomes are far from clear. Here in this paper, we quantified yearly anomalies of seasonal and annual NEP, net carbon uptake period (CUP), and the maximum daily NEP (NEPmax) in response to climatic variables in 24 deciduous broadleaf forest (DBF), evergreen forest (EF), and grassland (GRA) ecosystems that include at least eight years of eddy covariance observations. Over the 228 site-years studied, interannual variations in NEP were mostly explained by anomalies of CUP and NEPmax. CUP was determined by spring and autumn net carbon uptake phenology, which were sensitive to annual meteorological variability. Warmer spring temperatures led to an earlier start of net carbon uptake activity and higher spring and annual NEP values in DBF and EF, while warmer autumn temperatures in DBF, higher autumn radiation in EF, and more summer and autumn precipitation in GRA resulted in a later ending date of net carbon uptake and associated higher autumn and annual NEP. Anomalies in NEPmax s were determined by summer precipitation in DBF and GRA, and explained more than 50% of variation in summer NEP anomalies for all the three biomes. Results demonstrate the role of meteorological variability in controlling CUP and NEPmax, which in turn help describe the seasonal and interannual variability of NEP.

54 ENVIRONMENTAL SCIENCES↗

Microbes as engines of ecosystem function: When does community structure enhance predictions of ecosystem processes?

In this study, microorganisms are vital in mediating the earth’s biogeochemical cycles; yet, despite our rapidly increasing ability to explore complex environmental microbial communities, the relationship between microbial community structure and ecosystem processes remains poorly understood. Here, we address a fundamental and unanswered question in microbial ecology: ‘When do we need to understand microbial community structure to accurately predict function?’ We present a statistical analysis investigating the value of environmental data and microbial community structure independently and in combination for explaining rates of carbon and nitrogen cycling processes within 82 global datasets. Environmental variables were the strongest predictors of process rates but left 44% of variation unexplained on average, suggesting the potential for microbial data to increase model accuracy. Although only 29% of our datasets were significantly improved by adding information on microbial community structure, we observed improvement in models of processes mediated by narrow phylogenetic guilds via functional gene data, and conversely, improvement in models of facultative microbial processes via community diversity metrics. Our results also suggest that microbial diversity can strengthen predictions of respiration rates beyond microbial biomass parameters, as 53% of models were improved by incorporating both sets of predictors compared to 35% by microbial biomass alone. Our analysis represents the first comprehensive analysis of research examining links between microbial community structure and ecosystem function. Taken together, our results indicate that a greater understanding of microbial communities informed by ecological principles may enhance our ability to predict ecosystem process rates relative to assessments based on environmental variables and microbial physiology.

respiration↗

Elevated [CO2] changes soil organic matter composition and substrate diversity in an arid ecosystem

Little is known about how rising atmospheric [CO2] will impact long-term plant biomass or the dynamics of soil organic matter (SOM) in arid ecosystems. Evans et al. (1) reported higher soil organic carbon (SOC) and total nitrogen (N) concentrations following 10 years exposure to elevated atmospheric [CO2] at the Nevada Desert Free-Air-Carbon dioxide-Enrichment (FACE) Facility (NDFF). In this study, we investigated potential mechanisms that resulted in increased SOC and total N accumulation and SOM stabilization using high resolution mass spectrometry. Samples were collected from soil profiles to 1 m in depth with a 0.2 m increment under the dominant evergreen shrub Larrea tridentata. The differences in the molecular composition and diversity of SOM were more evident in surface soils and declined with depth, and were consistent with higher SOC and total N concentrations under elevated than ambient [CO2]. Our molecular analysis also suggested increased root exudation and/or microbial necromass from stabilization of labile C and N contributed to SOM and N stocks. Increased microbial activity and metabolism under elevated [CO2] compared to ambient treatments suggest that elevated [CO2] altered microbial carbon use patterns, reflecting changes in the quality and quantity of SOC inputs. We found that plant-derived compounds were primary substrates for microbial activity under elevated [CO2] and microbial products were the main constituents of stabilized SOM. Our results suggest that arid ecosystems are a potential large C sink under elevated [CO2], given the extensive coverage of the land surface, and that labile compounds are transformed to stable SOM via microbial processes. Arid systems are limited by water, and thus may have a different C storage potential under changing climates than other ecosystems that are limited by nitrogen or phosphorus.

Tfaily, Malak M.↗

Assessing impacts of selective logging on water, energy, and carbon budgets and ecosystem dynamics in Amazon forests using the Functionally Assembled Terrestrial Ecosystem Simulator

Abstract. Tropical forest degradation from logging, fire, and fragmentation not only alters carbon stocks and carbon fluxes, but also impacts physical land surface properties such as albedo and roughness length. Such impacts are poorly quantified to date due to difficulties in accessing and maintaining observational infrastructures, as well as the lack of proper modeling tools for capturing the interactions among biophysical properties, ecosystem demography, canopy structure, and biogeochemical cycling in tropical forests. As a first step to address these limitations, we implemented a selective logging module into the Functionally Assembled Terrestrial Ecosystem Simulator (FATES) by mimicking the ecological, biophysical, and biogeochemical processes following a logging event. The model can specify the timing and aerial extent of logging events, splitting the logged forest patch into disturbed and intact patches; determine the survivorship of cohorts in the disturbed patch; and modifying the biomass and necromass (total mass of coarse woody debris and litter) pools following logging. We parameterized the logging module to reproduce a selective logging experiment at the Tapajós National Forest in Brazil and benchmarked model outputs against available field measurements. Our results suggest that the model permits the coexistence of early and late successional functional types and realistically characterizes the seasonality of water and carbon fluxes and stocks, the forest structure and composition, and the ecosystem succession following disturbance. However, the current version of FATES overestimates water stress in the dry season and therefore fails to capture seasonal variation in latent and sensible heat fluxes. Moreover, we observed a bias towards low stem density and leaf area when compared to observations, suggesting that improvements are needed in both carbon allocation and establishment of trees. The effects of logging were assessed by different logging scenarios to represent reduced impact and conventional logging practices, both with high and low logging intensities. The model simulations suggest that in comparison to old-growth forests the logged forests rapidly recover water and energy fluxes in 1 to 3 years. In contrast, the recovery times for carbon stocks, forest structure, and composition are more than 30 years depending on logging practices and intensity. This study lays the foundation to simulate land use change and forest degradation in FATES, which will be an effective tool to directly represent forest management practices and regeneration in the context of Earth system models.

54 ENVIRONMENTAL SCIENCES↗