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At least 37 records · Page 2

Dark Energy Survey year 3 results: point spread function modelling

ABSTRACT We introduce a new software package for modelling the point spread function (PSF) of astronomical images, called piff (PSFs In the Full FOV), which we apply to the first three years (known as Y3) of the Dark Energy Survey (DES) data. We describe the relevant details about the algorithms used by piff to model the PSF, including how the PSF model varies across the field of view (FOV). Diagnostic results show that the systematic errors from the PSF modelling are very small over the range of scales that are important for the DES Y3 weak lensing analysis. In particular, the systematic errors from the PSF modelling are significantly smaller than the corresponding results from the DES year one (Y1) analysis. We also briefly describe some planned improvements to piff that we expect to further reduce the modelling errors in future analyses.

79 ASTRONOMY AND ASTROPHYSICS↗

Cosmic distance inference from purely geometric BAO methods: Linear point standard ruler and correlation function model fitting

Leveraging the baryon acoustic oscillations (BAO) feature present in clustering 2-point statistics, we aim to measure cosmological distances independently of the underlying background cosmological model. However this inference is complicated by late-time nonlinearities that introduce model and tracer dependencies in the clustering correlation function and power spectrum, which must be properly accounted for. With this in mind, we introduce the “purely geometric-BAO,” which provides a rigorous tool to measure cosmological distances without assuming a specific background cosmology. We focus on the 2-point clustering correlation function monopole, and show how to implement such an inference scheme employing two different methodologies: the linear point standard ruler (LP) and correlation-function model-fitting (CF-MF). For the first time we demonstrate how, by means of the CF-MF, we can measure very precisely the sound-horizon/isotropic-volume-distance ratio, r d /DV(z¯), while correctly propagating all the uncertainties. Using synthetic data, we compare the outcomes of the two methodologies, and find that the LP provides up to 50% more precise measurements than the CF-MF. Finally, we test a procedure widely employed in BAO analyses: fitting the 2-point function while fixing the cosmological and the non-linear-damping parameters at fiducial values. We find that this underestimates the distance errors by nearly a factor of 2. Furthermore, we recommend that this practice be reconsidered, whether for parameter determination or model selection.

79 ASTRONOMY AND ASTROPHYSICS↗

The Green's Function Model Intercomparison Project (GFMIP) Protocol

The atmospheric Green's function method is a technique for modeling the response of the atmosphere to changes in the spatial field of surface temperature. While early studies applied this method to changes in atmospheric circulation, it has also become an important tool to understand changes in radiative feedbacks due to evolving patterns of warming, a phenomenon called the “pattern effect.” To better study this method, this paper presents a protocol for creating atmospheric Green's functions to serve as the basis for a model intercomparison project, GFMIP. The protocol has been developed using a series of sensitivity tests performed with the HadAM3 atmosphere-only general circulation model, along with existing and new simulations from other models. Our preliminary results have uncovered nonlinearities in the response of the atmosphere to surface temperature changes, including an asymmetrical response to warming versus cooling patch perturbations, and a change in the dependence of the response on the magnitude and size of the patches. These nonlinearities suggest that the pattern effect may depend on the heterogeneity of warming as well as its location. These experiments have also revealed tradeoffs in experimental design between patch size, perturbation strength, and the length of control and patch simulations. The protocol chosen on the basis of these experiments balances scientific utility with the simulation time and setup required by the Green's function approach. Running these simulations will further our understanding of many aspects of atmospheric response, from the pattern effect and radiative feedbacks to changes in circulation, cloudiness, and precipitation.

54 ENVIRONMENTAL SCIENCES↗

Effect of time-of-flight and point spread function modeling on detectability of myocardial defects in PET

Purpose: A study was designed to investigate the impact of time-of-flight (TOF) and point spread function (PSF) modeling on the detectability of myocardial defects. Methods: Clinical FDG-PET data were used to generate populations of defect-present and defect-absent images. Defects were incorporated at three contrast levels, and images were reconstructed by ordered subset expectation maximization (OSEM) iterative methods including ordinary Poisson, alone and with PSF, TOF, and PSF+TOF. Channelized Hotelling observer signal-to-noise ratio (SNR) was the surrogate for human observer performance. Results: For three iterations, 12 subsets, and no postreconstruction smoothing, TOF improved overall defect detection SNR by 8.6% as compared to its non-TOF counterpart for all the defect contrasts. Due to the slow convergence of PSF reconstruction, PSF yielded 4.4% less SNR than non-PSF. For reconstruction parameters (iteration number and postreconstruction smoothing kernel size) optimizing observer SNR, PSF showed larger improvement for faint defects. The combination of TOF and PSF improved mean detection SNR as compared to non-TOF and non-PSF counterparts by 3.0% and 3.2%, respectively. Conclusions: For typical reconstruction protocol used in clinical practice, i.e., less than five iterations, TOF improved defect detectability. In contrast, PSF generally yielded less detectability. For large number of iterations, TOF+PSF yields the best observer performance.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Stochastic stellar cluster initial mass functions: Models and impact on integrated cluster parameter determination

Stellar clusters are regularly used to study the evolution of their host galaxy. Except for a few nearby galaxies, these studies rely on the interpretation of integrated cluster properties, especially integrated photometry observed using multiple filters (i.e., the spectral energy distribution, SED). To allow interpretation of such observations, we present a large set of GALEV cluster models using the realistic approach of adopting stochastically sampled stellar initial mass functions. We provide models for a wide range of cluster masses (10{sup 3}-2 × 10{sup 5} M {sub ☉}), metallicities (–2.3 ≤ [Fe/H] ≤ +0.18 dex), foreground extinction, and 184 regularly used filters. We analyze various sets of stochastic cluster SEDs by fitting them with non-stochastic models, which is the procedure commonly used in this field. We identify caveats and quantify the fitting uncertainties associated with this standard procedure. We show that this can yield highly unreliable fitting results, especially for low-mass clusters.

79 ASTRONOMY AND ASTROPHYSICS↗

THE INITIAL MASS FUNCTION MODELED BY A LEFT TRUNCATED BETA DISTRIBUTION

The initial mass function for stars is usually fitted by three straight lines, which means it has seven parameters. The presence of brown dwarfs (BDs) increases the number of straight lines to four and the number of parameters to nine. Another common fitting function is the lognormal distribution, which is characterized by two parameters. This paper is devoted to demonstrating the advantage of introducing a left truncated beta probability density function, which is characterized by four parameters. The constant of normalization, the mean, the mode, and the distribution function are calculated for the left truncated beta distribution. The normal beta distribution that results from convolving independent normally distributed and beta distributed components is also derived. The chi-square test and the Kolmogorov-Smirnov test are performed on a first sample of stars and BDs that belongs to the massive young cluster NGC 6611, and on a second sample that represents the masses of the stars of the cluster NGC 2362.

79 ASTRONOMY AND ASTROPHYSICS↗

A CONDITIONAL LUMINOSITY FUNCTION MODEL OF THE COSMIC FAR-INFRARED BACKGROUND ANISOTROPY POWER SPECTRUM

The cosmic far-infrared background (CFIRB) is expected to be generated by faint, dusty star-forming galaxies during the peak epoch of galaxy formation. The anisotropy power spectrum of the CFIRB captures the spatial distribution of these galaxies in dark matter halos and the spatial distribution of dark matter halos in the large-scale structure. Existing halo models of CFIRB anisotropy power spectrum either are incomplete or lead to halo model parameters that are inconsistent with the galaxy distribution selected at other wavelengths. Here, we present a conditional luminosity function approach to describe the far-IR bright galaxies. We model the 250 {mu}m luminosity function and its evolution with redshift and model-fit the CFIRB power spectrum at 250 {mu}m measured by the Herschel Space Observatory. We introduce a redshift-dependent duty cycle parameter so that we are able to estimate the typical duration of the dusty star formation process in the dark matter halos as a function of redshifts. We find that the duty cycle of galaxies contributing to the far-IR background is 0.3-0.5 with a dusty star formation phase lasting for {approx}0.3-1.6 Gyr. This result confirms the general expectation that the far-IR background is dominated by star-forming galaxies in an extended phase, not bright starbursts that are driven by galaxy mergers and last {approx}10-100 Myr. The halo occupation number for satellite galaxies has a power-law slope that is close to unity over 0 < z < 4. We find that the minimum halo mass for dusty, star-forming galaxies with L {sub 250} > 10{sup 10} L {sub Sun} is 2 Multiplication-Sign 10{sup 11} M {sub Sun} and 3 Multiplication-Sign 10{sup 10} M {sub Sun} at z = 1 and 2, respectively. Integrating over the galaxy population with L {sub 250} > 10{sup 9} L {sub Sun }, we find that the cosmic density of dust residing in the dusty, star-forming galaxies is responsible for the background anisotropies {Omega}{sub dust} {approx} 3 Multiplication-Sign 10{sup -6} to 2 Multiplication-Sign 10{sup -5}, relative to the critical density of the universe.

79 ASTRONOMY AND ASTROPHYSICS↗

A probability density function model describing height estimation uncertainty due to image pixel intensity noise in digital fringe projection measurements

Digital fringe projection is a surface-profiling technique used for highly accurate non-contact measurements. As with any measurement technique, a variety of sources degrade to the measurement accuracy of the method. Here, this paper presents an analytically-derived probability density function that explicitly models the surface height measurement error due to inevitable phase measurement error, and it includes the specific case of pixel noise inducing the phase measurement error that ultimately leads to the height estimation error. The accuracy of the model was validated through Monte-Carlo simulations of resultant height distributions subject to arbitrarily correlated pixel intensity noise and experimental digital fringe projection measurements where the pixel-by-pixel height uncertainty estimations were compared to the predictions of the derived model.

42 ENGINEERING↗

Precise implications for real-space pair distribution function modeling of effects intrinsic to modern time-of-flight neutron diffractometers

Total scattering and pair distribution function (PDF) methods allow for detailed study of local atomic order and disorder, including materials for which Rietveld refinements are not traditionally possible (amorphous materials, liquids, glasses and nanoparticles). With the advent of modern neutron time-of-flight (TOF) instrumentation, total scattering studies are capable of producing PDFs with ranges upwards of 100–200 Å, covering the correlation length scales of interest for many materials under study. Despite this, the refinement and subsequent analysis of data are often limited by confounding factors that are not rigorously accounted for in conventional analysis programs. Furthermore, while many of these artifacts are known and recognized by experts in the field, their effects and any associated mitigation strategies largely exist as passed-down `tribal' knowledge in the community, and have not been concisely demonstrated and compared in a unified presentation. This article aims to explicitly demonstrate, through reviews of previous literature, simulated analysis and real-world case studies, the effects of resolution, binning, bounds, peak shape, peak asymmetry, inconsistent conversion of TOF to d spacing and merging of multiple banks in neutron TOF data as they directly relate to real-space PDF analysis. Suggestions for best practice in analysis of data from modern neutron TOF total scattering instruments when using conventional analysis programs are made, as well as recommendations for improved analysis methods and future instrument design.

36 MATERIALS SCIENCE↗

Improved Methods for Modeling Functional Transition Metal Compounds in Complex Environments: Ground States, Excited States, and Spectroscopies

Rapid advances in energy applications require new theory and computational models to provide guidance for interpretation of experimental results and mechanistic understanding. New theory development is necessary to treat systems of increasing complexity, size, and relevance to real applications. Functional transition metal compounds, including molecules, clusters, nanoparticles, surfaces, and solids, provide particular promise for magnetic, optical, and catalytic applications. However, such systems can be exceptionally challenging to model. To make progress in understanding and designing transition metal compounds for energy applications, theory must be able to simulate such systems in complex environments, as well as simulate the spectra of such complex systems to provide direct connections with experiment. Leveraging the independent expertise of the team’s members, this project aimed to make inroads to the theoretical and computational challenges associated with studying transition metal compounds, their reaction chemistry, photophysics and photochemistry, and response to spectroscopic interrogation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

An Evolutionary Yield Function Model Based on Plastic Work and Non-Associated Flow Rule

A constitutive law was developed based on the evolutionary yield function to account for the evolution of anisotropy induced by the plastic deformation. For the effective description of anisotropy, the yield stress function and plastic potential were separately defined based on the non-associated flow rule. In particular, for the description of the equivalent status, the accumulated plastic work was employed as an alternative to the accumulated plastic strain. Numerical formulations based on the plastic work were also derived in case the hardening rule, as well as the evolution of the plastic potential and yield stress function, were defined in terms of the plastic work. The developed constitutive law was characterized using the mechanical properties of the multi-phase BAO QP980 steel and niobium sheets at room temperature. From the uniaxial tension tests and the balanced biaxial tension test, separate sets of anisotropic coefficients for each of the plastic potential and yield stress functions were obtained as a function of the plastic work. By comparing with non-evolving yield functions, the importance of the developed constitutive law to properly describe the evolution of the plastic potential and yield function were validated.

Park, Taejoon↗

Coupled cluster Green function: Model involving single and double excitations

In this paper, we report on the development of a parallel implementation of the coupled-cluster (CC) Green function formulation (GFCC) employing single and double excitations in the cluster operator (GFCCSD). A key aspect of this work is the determination of the frequency dependent self-energy, Σ(ω). The detailed description of the underlying algorithm is provided, including approximations used that preserve the pole structure of the full GFCCSD method, thereby reducing the computational costs while maintaining an accurate character of methodology. Furthermore, for systems with strong local correlation, our formulation reveals a diagonally dominate block structure where as the non-local correlation increases, the block size increases proportionally. Here, to demonstrate the accuracy of our approach, several examples including calculations of ionization potentials for benchmark systems are presented and compared against experiment.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Modeling Functional Organic Chemistry in Arctic Rivers: An Idealized Siberian System

Rivers of the Arctic will become ever more important for the global climate, since they carry a majority of continental dissolved organic carbon flux into the rapidly changing polar ocean. Aqueous organics comprise a wide array of functional groups, several of which are likely to impact coastal and open water biophysical properties. Light attenuation, interfacial films, aerosol formation, gas release and momentum exchange can all be cited. We performed Lagrangian kinetic modeling for the evolution of riverine organic chemistry as the molecules in question make their way from the highlands to Arctic outlets. Classes as diverse as the proteins, sugars, lipids, re-condensates, humics, bio-tracers and small volatiles are all included. Our reduced framework constitutes an idealized northward flow driving a major hydrological discharge rate and primarily representing the Russian Lena. Mountainous, high solute and tundra sources are all simulated, and they meet up at several points between soil and delta process reactors. Turnover rates are parameterized beginning with extrapolated coastal values imposed along a limited tributary network, with connections between different terrestrial sub-ecologies. Temporal variation of our total dissolved matter most closely resembles the observations when we focus on the restricted removal and low initial carbon loads, suggesting relatively slow transformation along the water course. Thus, channel combinations and mixing must play a dominant role. Nevertheless, microbial and photochemical losses help determine the final concentrations for most species. Chemical evolution is distinct for the various functionalities, with special contributions from pre- and post-reactivity in soil and delta waters. Several functions are combined linearly to represent the collective chromophoric dissolved matter, characterized here by its absorption. Tributaries carry the signature of lignin phenols to segregate tundra versus taiga sources, and special attention is paid to the early then marine behaviors of low molecular weight volatiles. Heteropolycondensates comprise the largest percentage of reactive carbon in our simulations due to recombination/accumulation, and they tend to be preeminent at the mouth. Outlet concentrations of individual structures such as amino acids and absorbers lie above threshold values for biophysical influence, on the monolayer and light attenuation. The extent of coastal spreading is examined through targeted regional box modeling, relying on salinity and color for calibration. In some cases, plumes reach the scale of peripheral arctic seas, and amplification is expected during upcoming decades. Conclusions are mapped from the Lena to other boreal discharges, and future research questions are outlined regarding the bonding type versus mass release as permafrost degrades. Dynamic aqueous organic coupling is recommended for polar system models, from headwaters to coastal diluent.

54 ENVIRONMENTAL SCIENCES↗

PSF–NET: A Nonparametric Point-spread Function Model for Ground-based Optical Telescopes

Ground-based optical telescopes are seriously affected by atmospheric turbulence induced aberrations. Understanding properties of these aberrations is important both for instrument design and image restoration method development. Because the point-spread function can reflect performance of the whole optic system, it is appropriate to use the point-spread function to describe atmospheric turbulence induced aberrations. Assuming point-spread functions induced by the atmospheric turbulence with the same profile belong to the same manifold space, we propose a nonparametric point-spread function—PSF–NET. The PSF–NET has a cycle convolutional neural network structure and is a statistical representation of the manifold space of PSFs induced by the atmospheric turbulence with the same profile. Testing the PSF–NET with simulated and real observation data, we find that a well trained PSF–NET can restore any short exposure images blurred by atmospheric turbulence with the same profile. Besides, we further use the impulse response of the PSF–NET, which can be viewed as the statistical mean PSF, to analyze interpretation properties of the PSF–NET. We find that variations of statistical mean PSFs are caused by variations of the atmospheric turbulence profile: as the difference of the atmospheric turbulence profile increases, the difference between statistical mean PSFs also increases. The PSF–NET proposed in this paper provides a new way to analyze atmospheric turbulence induced aberrations, which would benefit the development of new observation methods for ground-based optical telescopes.

79 ASTRONOMY AND ASTROPHYSICS↗

Realistic spectral function model for charged-current quasielastic-like neutrino and antineutrino scattering cross sections on C 12

A detailed study of charged current quasielastic neutrino and antineutrino scattering cross sections on a 12 C target with no pions in the final state is presented. The initial nucleus is described by means of a realistic spectral function S($p$,E) in which nucleon-nucleon correlations are implemented by using natural orbitals through the Jastrow method. The roles played by these correlations and by final-state interactions are analyzed and discussed. The model also includes the contribution of weak two-body currents in the two-particle two-hole sector, evaluated within a fully relativistic Fermi gas. The theoretical predictions are compared with a large set of experimental data for double-differential, single-differential, and total integrated cross sections measured by the MiniBooNE, MINER ν A , and T2K experiments. Good agreement with experimental data is found over the whole range of neutrino energies. The results are also in global good agreement with the predictions of the superscaling approach, which is based on the analysis of electron-nucleus scattering data, with only a few differences seen at specific kinematics.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

In–context promoter bashing of the Sorghum bicolor gene models functionally annotated as bundle sheath cell preferred expressing phosphoenolpyruvate carboxykinase and alanine aminotransferase

In-context promoter bashing via genome editing is a route to identify and characterize critical regulatory regions that govern expression of genes of interest. The outcomes of in-context promoter bashing can be used to inform editing strategies to modulate the expression of selected gene models in a desired fashion. Here, we employed in-context promoter bashing to characterize the proximal upstream regulatory regions of sorghum genes encoding phosphoenolpyruvate carboxykinase bundle sheath (SbPEPCK.BS, SbiTx430.01G455400) and alanine aminotransferase bundle sheath (SbAlaAT.BS, SbiTx430.02G006600), two proteins involved in the PCK C 4 pathway. Characterized germinal edits within the targeted regions upstream of these two genes ranged in size from 138 up to 1790 bp. A 138 bp within the SbPEPCK.BS upstream region and a 1643 bp element within the SbAlaAT.BS upstream region were determined to be important for maintenance of transcription levels. No change in development or various physiological parameters was observed in characterized lineages carrying promoter edits. However, significant changes in seed reserves and a reduction in 100-seed weight were consistently observed, under both greenhouse and field environments, in plants carrying an edit in the promoter of SbPEPCK.BS gene, which were significantly reduced in transcript accumulation for this gene.

60 APPLIED LIFE SCIENCES↗

Density functional modeling of the binding energies between aluminosilicate oligomers and different metal cations

Interactions between negatively charged aluminosilicate species and positively charged metal cations are critical to many important engineering processes and applications, including sustainable cements and aluminosilicate glasses. In an effort to probe these interactions, here we have calculated the pair-wise interaction energies (i.e., binding energies) between aluminosilicate dimer/trimer and 17 different metal cations M n+ (M n+ = Li + , Na + , K + , Cu + , Cu 2+ , Co 2+ , Zn 2+ , Ni 2+ , Mg 2+ , Ca 2+ , Ti 2+ , Fe 2+ , Fe 3+ , Co 3+ , Cr 3+ , Ti 4+ and Cr 6+ ) using a density functional theory (DFT) approach. Analysis of the DFT-optimized structural representations for the clusters (dimer/trimer + M n+ ) shows that their structural attributes (e.g., interatomic distances) are generally consistent with literature observations on aluminosilicate glasses. The DFT-derived binding energies are seen to vary considerably depending on the type of cations (i.e., charge and ionic radii) and aluminosilicate species (i.e., dimer or trimer). A survey of the literature reveals that the difference in the calculated binding energies between different M n+ can be used to explain many literature observations associated with the impact of metal cations on materials properties (e.g., glass corrosion, mineral dissolution, and ionic transport). Analysis of all the DFT-derived binding energies reveals that the correlation between these energy values and the ionic potential and field strength of the metal cations are well captured by 2nd order polynomial functions ( R 2 values of 0.99–1.00 are achieved for regressions). Given that the ionic potential and field strength of a given metal cation can be readily estimated using well-tabulated ionic radii available in the literature, these simple polynomial functions would enable rapid estimation of the binding energies of a much wider range of cations with the aluminosilicate dimer/trimer, providing guidance on the design and optimization of sustainable cements and aluminosilicate glasses and their associated applications. Finally, the limitations associated with using these simple model systems to model complex interactions are also discussed.

Gong, Kai↗

A Kolmogorov-Brutsaert structure function model for evaporation into a turbulent atmosphere

In 1965, Brutsaert proposed a model that predicted mean evaporation rate E¯ from rough surfaces to scale with the 3/4 power law of the friction velocity ( u* ) and the square–root of molecular diffusivity (D m ) for water vapor. Furthermore, in arriving at these results, a number of assumptions were made regarding the surface renewal rate describing the contact durations between eddies and the evaporating surface, the diffusional mass process from the surface into eddies, and the cascade of turbulent kinetic energy sustaining the eddy renewal process itself.

54 ENVIRONMENTAL SCIENCES↗