Search NASA⌕ Search

SEARCH · Search NASA

Results for “Kd”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 37 records · Page 2

Spectroscopy of Twisted Bilayer Graphene Correlated Insulators

Here we analytically compute the scanning tunneling microscopy (STM) signatures of integer-filled correlated ground states of the magic angle twisted bilayer graphene (TBG) narrow bands. After experimentally validating the strong-coupling approach at ± 4 electrons/moiré unit cell, we consider the spatial features of the STM signal for 14 different many-body correlated states and assess the possibility of Kekulé distortion (KD) emerging at the graphene lattice scale. Remarkably, we find that coupling the two opposite graphene valleys in the intervalley-coherent (IVC) TBG insulators does not always result in KD. As an example, we show that the Kramers IVC state and its nonchiral U(4) rotations do not exhibit any KD, while the time-reversal-symmetric IVC state does. Our results, obtained over a large range of energies and model parameters, show that the STM signal and Chern number of a state can be used to uniquely determine the nature of the TBG ground state.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Fyn–Saracatinib Complex Structure Reveals an Active State-like Conformation

Fyn is a Src-family tyrosine kinase implicated in synaptic dysfunction and neuroinflammation across multiple neurodegenerative disorders, including Alzheimer’s disease (AD) and Parkinson’s disease (PD). Saracatinib (AZD0530) is a potent Src-family inhibitor that has been explored as a repurposed therapeutic; however, its clinical utility is limited by poor kinase selectivity caused by high sequence conservation within Src-family ATP-binding sites. Here, we combine surface plasmon resonance (SPR) and X-ray crystallography to define saracatinib recognition by the Fyn kinase domain (KD). SPR single-cycle kinetics shows that saracatinib binds the isolated Fyn KD and full-length Fyn with low-nanomolar affinity, whereas dasatinib binds with subnanomolar affinity and markedly slower dissociation. We determined the crystal structure of the Fyn KD-saracatinib complex at 2.22 Å resolution. The kinase adopts an active-like conformation with the DFG motif and αC-helix in the ‘in’ state and a conserved β3 αC Lys-Glu salt bridge. Saracatinib occupies the adenine and ribose pockets, and engages the hinge through direct and water-mediated hydrogen bonding while complementing a hydrophobic back pocket by van der Waals contacts. Comparison with reported saracatinib-bound structures of other kinases suggests that the active-state geometry observed for Fyn creates a pocket not observed in inactive-like complexes, providing a structural handle for designing Fyn-selective inhibitors. Comparison with all saracatinib-bound kinase co-structures currently available in the PDB (ALK2 and PKMYT1) indicates a conserved monodentate hinge binding mode but kinase-dependent αC-helix conformations, providing a structural rationale for designing Fyn-selective analogues.

AZD0530↗

Sorption of Metals and Radionuclides in Cementitious Leachate Impacted Sediments from the Savannah River Site

Performance assessments (PAs) are calculations used to establish the risk posed by radioactive waste disposal facilities in the Savannah River Site (SRS). The distribution coefficient (Kd; solid/liquid concentration ratio; Csolid/liquid) is one of the key geochemical parameters used in the PA to provide a measure of how strongly the dissolved contaminants bind to solid phases; the greater the Kd value, the greater the tendency to bind to the solids. The overall purpose of this study was to measure this key parameter for several constituents of concern in the cementitious leachate impacted SRS sediment environments. Particular attention was directed at quantifying the influence of cementitious leachate from various stages of cement aging on the sorption of radioactive waste and heavy metals on SRS sediments.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Fundamental Data Supporting Novel Radiochemical Separations

Rapid chemical separation of actinide, lanthanide, and other radioactive elements is an important pursuit in the field of radioanalytical and nuclear chemistry. Vital to the development of advanced systems to achieve such separations is the determination of elements’ distribution coefficients (Kd values) for chromatographic resins. In this study, batch contacts of 68 elements were performed with various commercially available resins, and the resulting distribution coefficients were determined by Inductively Coupled Plasma – Mass Spectrometry Analysis (ICP-MS). An evaluation of the resulting Kd data for elements on the resins was performed. Finally, this work presents prototype flowsheets for streamlined separation of radioisotopes from a variety of complex matrices.

Distribution Coefficient↗

Hydrogen permeation in iron-chromium-aluminum (FeCrAl) alloys and the effects of microstructure and surface oxide

Iron–chromium–aluminum (FeCrAl) class alloys are candidates for use as cladding for accident-tolerant fuels and moderators. In this context, hydrogen isotope permeation in FeCrAl alloys is an important material property. Here, in the present work, the apparent permeability, effective diffusivity, and apparent solubility of hydrogen in the FeCrAl alloys C26M and Kanthal D (KD) were measured with gas-driven hydrogen permeation. Permeation measurements were conducted at temperatures of 400 to 700 °C and at gas-driven pressures from 1 to 100 kPa. In particular, the effect of grain size on hydrogen transport was studied with KD samples with three different microstructures: nanocrystalline (NC), ultra-fine grained (UFG), and coarse-grained (CG). The UFG and NC specimens had higher apparent activation energies (73.4 kJ mol -1 and 65.2 kJ mol -1 , respectively) for hydrogen permeability than the CG sample (46.9 kJ mol -1 ). An aluminum oxide layer formed on the primary- and secondary-side surfaces of all samples subjected to permeation experiments which demonstrated the propensity of FeCrAl alloys to form these innate oxide permeation barriers.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Time-dependent iodate and iodide adsorption to Fe oxides

Aqueous iodine removal via adsorption to Fe oxides could provide an efficient remedial pathway for vadose zone and groundwater contamination. We conducted a series of macroscopic batch experiments to determine the extent of the time-dependent iodate (IO3-) and iodide (I-) adsorption to four Fe oxides (i.e., ferrihydrite, goethite, magnetite and hematite) at different pH values and solution ionic strengths (IS). The results showed that IO3- adsorption extent [in terms of the average distribution coefficient (Kd) after 2 days of reacting time] followed the order: ferrihydrite (927.5 mL/g) > goethite (84.9 mL/g) > magnetite (23.8 mL/g) > hematite (9.5 mL/g). However, the range of specific surface area (SSA) normalized Kd values was narrow (2 - 4.6 mL/m2), suggesting SSA control over the adsorption extent. The adsorption extent correlated negatively with both pH and IS, implying IO3- outer-sphere adsorption. The adsorption extent increased with time (~27-48%) after 200 days, likely because of interparticle diffusion within aggregates. I- adsorption was insignificant for all Fe oxides. Because of its large SSA, ferrihydrite could be efficient at removing aqueous iodate, potentially decreasing the time of groundwater plume spreading.

Wang, Guohui↗

Evidence for Lignin–Carbohydrate Complexes from Studies of Transgenic Switchgrass and a Model Lignin–Pectin Composite

Lignin–carbohydrate complexes (LCCs) form through interactions of lignin with plant cell wall polysaccharides and are thought to be a significant source of biomass recalcitrance. In this work, we investigated LCCs formed between lignin and pectin homogalacturonan (HG). The structural changes in HG deficient transgenic switchgrass (GAUT4-knockdown, GAUT4-KD) after hot water pretreatment were compared to wild-type plants using small-angle neutron scattering (SANS), which showed that there were ~2.2-fold more lignin aggregates in GAUT4-KD biomass compared to the wild type. This demonstrated that decreased pectin resulted in more lignin redistribution and suggested that interactions between lignin and HG restrict lignin mobility in plant cell walls. To better understand the types of interactions between lignin and pectin, a model composite was prepared by polymerizing either protiated or partially deuterated coniferyl alcohol to form a dehydrogenation polymer (DHP) in the presence of HG. Small-angle X-ray scattering (SAXS) showed that the DHP and HG form a highly interconnected network structure that is not observed in a physical mixture of the individual polymers. Contrast matching SANS revealed the structure of DHP and HG in the composite and showed that the HG forms a swollen interconnected polymer network (power-law exponent, P = 1.5) interspersed with DHP particles (radius of gyration, Rg, 264 Å) that are composed of solvent-accessible DHP polymers (P = 2.3). Fourier transform infrared spectroscopy showed a unique ester absorption band in the DHP/HG composites. Solid-state nuclear magnetic resonance (NMR) analysis also supports interactions between DHP and HG. Overall, this study provides new insights into the relationship between primary and secondary cell wall polymers during cell wall synthesis and how LCCs formed between pectin and lignin could represent a previously unrecognized source of biomass recalcitrance. This knowledge may help develop new approaches to modulate cell wall properties to improve biofuel and bioproduct production.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Conformational spread drives the evolution of the calcium–calmodulin protein kinase II

The calcium calmodulin (Ca 2+ /CaM) dependent protein kinase II (CaMKII) decodes Ca 2+ frequency oscillations. The CaMKIIα isoform is predominantly expressed in the brain and has a central role in learning. I matched residue and organismal evolution with collective motions deduced from the atomic structure of the human CaMKIIα holoenzyme to learn how its ring architecture abets function. Protein dynamic simulations showed its peripheral kinase domains (KDs) are conformationally coupled via lateral spread along the central hub. The underlying β-sheet motions in the hub or association domain (AD) were deconvolved into dynamic couplings based on mutual information. They mapped onto a coevolved residue network to partition the AD into two distinct sectors. A second, energetically stressed sector was added to ancient bacterial enzyme dimers for assembly of the ringed hub. The continued evolution of the holoenzyme after AD–KD fusion targeted the sector’s ring contacts coupled to the KD. Among isoforms, the α isoform emerged last and, it alone, mutated rapidly after the poikilotherm–homeotherm jump to match the evolution of memory. The correlation between dynamics and evolution of the CaMKII AD argues single residue substitutions fine-tune hub conformational spread. The fine-tuning could increase CaMKIIα Ca 2+ frequency response range for complex learning functions.

59 BASIC BIOLOGICAL SCIENCES↗

Helical antiferromagnetic ordering in EuNi 1.95 As 2 single crystals

The Eu + 2 spins-7/2 in EuNi 2 As 2 with the body-centered tetragonal ThCr 2 Si 2 structure order antiferromagnetically below the Néel temperature T N = 15 K into a helical antiferromagnetic (AFM) structure with the helix axis aligned along the tetragonal c axis and the Eu ordered moments aligned ferromagnetically within the ab plane as previously reported from neutron diffraction measurements [T. Jin et al., Phys. Rev. B 99, 014425 (2019)]. Here we study the crystallographic, magnetic, thermal, and electronic transport properties of Bi-flux-grown single crystals using single-crystal x-ray diffraction, anisotropic magnetic susceptibility χ, isothermal magnetization M, heat capacity Cp, and electrical resistivity ρ measurements versus applied magnetic field H and temperature T. Vacancies are found on the Ni sites corresponding to the composition EuNi 1.95 (1) As 2. A good fit of the ρ (T) data by the Bloch-Grüneisen theory for metals was obtained. The χab (T) data below T N are fitted well by molecular field theory (MFT), and the helix turn angle kd and the Eu-Eu Heisenberg exchange constants are extracted from the fit parameters. The kd value is in good agreement with the neutron-diffraction result. The magnetic contribution to the zero-field heat capacity below T N is also fitted by MFT. The isothermal in-plane magnetization M ab exhibits two metamagnetic transitions versus H, whereas M c (T = 2 K ) is nearly linear up to H = 14 T, both behaviors being consistent with MFT. The M c (H, T) , ρ(H c , T) , and Cp (H c , T) data yielded a H c - T phase diagram separating the AFM and paramagnetic phases in good agreement with MFT. Anisotropic χ(T) literature data for the ThCr 2 Si 2 -type helical antiferromagnet EuRh 2 As 2 were also fitted well by MFT. A comparison is made between the crystallographic and magnetic properties of ThCr 2 Si 2 -type Eu M 2 Pn 2 compounds with M = Fe , Co, Ni, Cu, or Rh, and Pn = P or As, where only ferromagnetic and c -axis helical AFM structures are found.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Sensitivity Analysis of Tunable Equation of State Material Model In Pulsed Mercury Target Simulation

A pulsed neutron spallation target is subjected to very short but intense loads from repeated proton pulses. Approximately 60% of the energy from each proton pulse is deposited into the mercury target material and the stainless-steel target structure, leading to a high-pressure region in both the stationary target structure and the flowing mercury. The high-pressure region propagates and leads to fluid-structure interaction. The resultant loading on the target structure containing liquid mercury is difficult to predict, although various simulation approaches and material models for the mercury have been tried. To date, the best match of simulation to experimental data is obtained by using an equation of state (EOS) material model with a specified tensile cutoff pressure, which simulates the cavitation threshold. The inclusion of a threshold to represent cavitation is key to the successful predictions of stress waves triggered by the high-energy pulse striking the mercury and vessel. However, recent measurements of target structure strain show that significant discrepancies remain between the measured and simulated strain values in the EOS mercury model. These differences grow when noncondensable helium gas is intentionally injected into the flowing mercury to reduce the loading on the structure. An EOS-based proportional–integral–derivative (PID) mercury model has been proposed to reduce the gap between the measured and simulated vessel strain responses for targets with gas injection. The conceptual and numerical description and initial investigation of the PID model are presented in previous work. Further studies of this PID model — including the sensitivity of the structure’s strain response to model parameters (the tensile cutoff, PID parameters Kp, Ki, and Kd) — are reported in this article. Results show the strain response is more sensitive to changes in the tensile cutoff value than to changes in the model parameters Kp, Ki, and Kd. These results will aid in future work where the model parameters will be optimized to match simulation data to strain measurements.

Lin, Lianshan↗

Sequestering Rare Earth Elements and Precious Metals from Seawater Using a Highly Efficient Polymer Adsorbent Derived from Acrylic Fiber

An amidoxime and carboxylate containing polymer adsorbent derived from acrylic fiber has shown extremely high efficiencies for extracting critical materials and precious metals from seawater. Among 50 extractable elements, the lanthanides, cobalt, and palladium were ranked near the top with KD values in the order of 107, about an order of magnitude higher than that of uranium. The KD value of the lanthanides increased linearly with the atomic number indicating charge density is a factor controlling trivalent lanthanide extractability in seawater. The data given in this report provides crucial information regarding the strategies of ocean mining of critical materials and precious metals.

36 MATERIALS SCIENCE↗

Tetrahedral Trees: A Family of Hierarchical Spatial Indexes for Tetrahedral Meshes

In this work, we address the problem of performing efficient spatial and topological queries on large tetrahedral meshes with arbitrary topology and complex boundaries. Such meshes arise in several application domains, such as 3D Geographic Information Systems (GISs), scientific visualization, and finite element analysis. To this aim, we propose Tetrahedral trees, a family of spatial indexes based on a nested space subdivision (an octree or a kD-tree) and defined by several different subdivision criteria. We provide efficient algorithms for spatial and topological queries on Tetrahedral trees and compare to state-of-the-art approaches. Our results indicate that Tetrahedral trees are an improvement over R*-trees for querying tetrahedral meshes; they are more compact, faster in many queries, and stable at variations of construction thresholds. They also support spatial queries on more general domains than topological data structures, which explicitly encode adjacency information for efficient navigation but have difficulties with domains with a non-trivial geometric or topological shape.

97 MATHEMATICS AND COMPUTING↗

Uranium and Nickel Partitioning in a Contaminated Riparian Wetland

Uranium (U) and nickel (Ni) released 50 years ago have been immobilized in the Tims Branch wetlands located on the Savannah River Site in the United States. Sediments were collected from seven locations to identify the factors responsible for this attenuation. Ni and U contents in the solids were significantly correlated, suggesting that depositional as opposed to chemical processes contributed to their spatial distribution. Based on sequential extractions, 63 ± 16% of the U was partitioned into the organic fraction, whereas Ni was distributed between several sediment fractions. An inverse pH-organic matter (OM) correlation and positive correlations of OM with total U and organic-bound U/Ni suggest that increased OM preservation and binding to the mineral surfaces were likely responsible for Ni- and especially U-sediment retention (Tims Branch pH = 4.84 ± 0.68). EXAFS analysis indicated the predominance of U(VI) coordinated with clay minerals (~65%), together with ~35% coordinated to either OM (in areas with elevated OM levels) or iron oxides. The desorption-Kd coefficients of U (3972 ± 1370 L/kg) and Ni (30 ± 8 L/kg) indicate that dissolved Ni poses a greater long-term risk than dissolved U for migrating downstream. This study suggests that a delicate balance of geochemical properties controls whether wetlands behave as sinks or sources of contaminants.

63 RADIATION, THERMAL, AND OTHER ENVIRON. POLLUTAN↗

Combustion of 10–100 μm aluminum droplets in detonation products gases

Here we describe a two-phase model of combustion effects in aluminized high explosive (HE) charges. It is based on: (i) a Gas Dynamic Model of the expansion of the detonation product gases and their turbulent combustion with air; and (ii) a Heterogeneous Continuum Model of aluminum (Al) droplets and their combustion with the detonation product gases. Initial conditions are based on an analytical similarity solution for a cylindrical Chapman-Jouguet (CJ) detonation propagating at the CJ detonation velocity. The CJ jump conditions are computed at the thermodynamic equilibrium state by the Cheetah code, assuming the Al droplets are inert. We assume that the Al is 10 % of the charge mass and occurs as droplets at the CJ state. Different initial droplet diameters, ranging from 10 to 100 microns, are studied. A hydrodynamic combustion model based on large Damköhler numbers is employed in this study, -3σ(1 + 0.276 $\sqrt{Re}$)/($Kd^2_w$). It has a square-root dependence on the Reynolds number (Re) and inversed-squared dependence on the droplet diameter (d w ). The burnout time (t B ) of the Al droplets has a three-halves dependence on the droplet diameter, t B ~ ($d^0_w$) 3/2 . After burnout, the detonation products act as detonation products of the HE charge with active Al. They turbulently mix with air and form a combustion layer on the outer edge of the fireball. Details of the two-phase model, initial conditions and evolution of the flow field will be described.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Combining computational modeling and experimental library screening to affinity-mature VEEV-neutralizing antibody F5

Engineered monoclonal antibodies have proven to be highly effective therapeutics in recent viral outbreaks. However, despite technical advancements, an ability to rapidly adapt or increase antibody affinity and by extension, therapeutic efficacy, has yet to be fully realized. We endeavored to stand-up such a pipeline using molecular modeling combined with experimental library screening to increase the affinity of F5, a monoclonal antibody with potent neutralizing activity against Venezuelan Equine Encephalitis Virus (VEEV), to recombinant VEEV (IAB) E1E2 antigen. We modeled the F5/E1E2 binding interface and generated predictions for mutations to improve binding using a Rosetta-based approach and dTERMen, an informatics approach. The modeling was complicated by the fact that a high-resolution structure of F5 is not available and the H3 loop of F5 exceeds the length for which current modeling approaches can determine a unique structure. A subset of the predicted mutations from both methods were incorporated into a phage display library of scFvs. This library and a library generated by error-prone PCR were screened for binding affinity to the recombinant antigen. Results from the screens identified favorable mutations which were incorporated into 12 human-IgG1 variants. The best variant, containing eight mutations, improved KD from 0.63 nM (parental) to 0.01 nM. While this did not improve neutralization or therapeutic potency of F5 against IAB, it did increase cross-reactivity to other closely related VEEV epizootic and enzootic strains, demonstrating the potential of this method to rapidly adapt existing therapeutics to emerging viral strains.

affinity-maturation↗

Extraction chromatography of 225 Ac and lanthanides on N,N-dioctyldiglycolamic acid /1-butyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide solvent impregnated resin

The alpha-emitter 225 Ac (t 1/2 = 9.92 d) is currently under development for targeted alpha-particle therapy of cancer, and accelerator production of 225 Ac via proton irradiation of thorium targets requires robust separations of 225 Ac from chemically similar fission product lanthanides. Additionally, the lanthanide elements represent critical components in modern technologies, and radiolanthanides such as 140 Nd (t 1/2 = 3.37 d) also have potential application in the field of nuclear medicine. The ionic liquid, 1-butyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide ([Bmim][NTf 2 ]), combined with the diglycolamide extractant, N,N-dioctyldiglycolamic acid (DODGAA), was adsorbed on macroporous resin support to produce a solvent impregnated resin (SIR) that was investigated for separations of 225 Ac and lanthanides. The equilibrium distribution coefficients (Kd) of the rare earth elements (Sc(III), Y(III), Ln(III)), 225 Ac(III), Th(IV), and U(VI) on the prepared DODGAA/[Bmim][NTf 2 ]-SIR were determined from batch adsorption experiments in HCl and HNO 3 media. The DODGAA/[Bmim][NTf2]-SIR exhibited preferential uptake of the heavier lanthanide elements while allowing for the separation of the lighter lanthanides. Column separations utilizing the DODGAA/[Bmim][NTf 2 ]-SIR were effective at separating the lighter lanthanides from each other, and separating 225 Ac from a mixture of lanthanides, 213 Bi, and 225 Ra without the need for additional complexing agents.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A cancellation problem in hybrid particle-in-cell schemes due to finite particle size

The quasi-neutral hybrid particle-in-cell algorithm with kinetic ions and fluid electrons is a popular model to study multi-scale problems in laboratory, space, and astrophysical plasmas. Here, it is shown that the different spatial discretizations of ions as finite-spatial-size particles and electrons as a grid-based fluid can lead to significant numerical wave dispersion errors in the long wavelength limit (kd i «1, where k is the wavenumber and di is the ion skin-depth). The problem occurs when high-order particle-grid interpolations, or grid-based smoothing, spreads the electric field experienced by the ions across multiple spatial cells and leads to inexact cancellation of electric field terms in the total (ion + electron) momentum equation. Practical requirements on the mesh spacing Δx/d i are suggested to bound these errors from above. The accuracy impact of not respecting these resolution constraints is shown for a non-linear shock problem.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Sorption kinetics and stability of conventional adsorbents for mercury remediation

In-situ remediation of mercury at numerous contaminated sites worldwide is a challenging and costly endeavor due to the persistency of this contaminant. In this study, we evaluated eight commercially available sorbent media ranging from carbon-, clays- and silica-based materials (PBC– Biochar, eSorb – Sorbster, nsPAC – Powdered Activated Carbon, fsPAC – Powdered Activated Carbon with Mackinawite, F300 – Filtrasorb 300, Si-SH – Silica Thiol, eBind – RemBind, Q-Clay – Organoclay PM-199), for their effectiveness in sorbing mercury (Hg 2+ ) and mercury complexed with dissolved organic matter (Hg-DOM). Under the chosen experimental conditions of this study, results showed that in the absence of DOM, the kinetic rates of Hg 2+ sorption onto the evaluated sorbents were in the order of 0.31 min-1 (Si-SH) to 2.98 min -1 (nsPAC), whereas in the presence of DOM, the rates varied from 0.16 min-1 (F300) to 0.95 min -1 (nsPAC). The measured sorption capacity for Hg 2+ in the absence of DOM varied from 3.02 mg/g (Q-Clay) to 35.15 mg/g (Si-SH), whereas in the presence of DOM, calculated partition coefficient (KD) ranged from 69.7 mL/g (Q-Clay) to 41,510 mL/g (Si-SH). Furthermore, kinetic data suggest liquid film diffusion was the rate-limiting steps governing mercury sorption onto the studied media. Overall, the obtained study parameters (kinetics/isotherm) are particularly important in informing robust engineering designs for deployment of the vast majority of evaluated sorbents. Thus, sorbent-based strategies offer viable solutions for cost-effective cleanup of mercury at industrially contaminated sites.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗