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A comparison of spectral mixture analysis an NDVI for ascertaining ecological variables

In this study, we compare the performance of spectral mixture analysis to the Normalized Difference Vegetation Index (NDVI) in detecting change in a grassland across topographically-induced nutrient gradients and different management schemes. The Konza Prairie Research Natural Area, Kansas, is a relatively homogeneous tallgrass prairie in which change in vegetation productivity occurs with respect to topographic positions in each watershed. The area is the site of long-term studies of the influence of fire and grazing on tallgrass production and was the site of the First ISLSCP (International Satellite Land Surface Climatology Project) Field Experiment (FIFE) from 1987 to 1989. Vegetation indices such as NDVI are commonly used with imagery collected in few (less than 10) spectral bands. However, the use of only two bands (e.g. NDVI) does not adequately account for the complex of signals making up most surface reflectance. Influences from background spectral variation and spatial heterogeneity may confound the direct relationship with biological or biophysical variables. High dimensional multispectral data allows for the application position of techniques such as derivative analysis and spectral curve fitting, thereby increasing the probability of successfully modeling the reflectance from mixed surfaces. The higher number of bands permits unmixing of a greater number of surface components, separating the vegetation signal for further analyses relevant to biological variables.

Wessman, Carol A.↗

Temporal Stability of the NDVI-LAI Relationship in a Napa Valley Vineyard

Remotely sensed normalized difference vegetation index (NDVI) values, derived from high-resolution satellite images, were compared with ground measurements of vineyard leaf area index (LAI) periodically during the 2001 growing season. The two variables were strongly related at six ground calibration sites on each of four occasions (r squared = 0.91 to 0.98). Linear regression equations relating the two variables did not significantly differ by observation date, and a single equation accounted for 92 percent of the variance in the combined dataset. Temporal stability of the relationship opens the possibility of transforming NDVI maps to LAI in the absence of repeated ground calibration fieldwork. In order to take advantage of this circumstance, however, steps should be taken to assure temporal consistency in spectral data values comprising the NDVI.

Johnson, L. F.↗

Analysis of the Relationship Between Climate and NDVI Variability at Global Scales

interannual variability in modeled (CASA) C flux is in part caused by interannual variability in Normalized Difference Vegetation Index (NDVI) Fraction of Photosynthetically Active Radiation (FPAR). This study confirms a mechanism producing variability in modeled NPP: -- NDVI (FPAR) interannual variability is strongly driven by climate; -- The climate driven variability in NDVI (FPAR) can lead to much larger fluctuation in NPP vs. the NPP computed from FPAR climatology

Zeng, Fan-Wei↗

Spatial and Temporal Variation in Primary Productivity (NDVI) of Coastal Alaskan Tundra: Decreased Vegetation Growth Following Earlier Snowmelt

In the Arctic, earlier snowmelt and longer growing seasons due to warming have been hypothesized to increase vegetation productivity. Using the Normalized Difference Vegetation Index (NDVI) from both field and satellite measurements as an indicator of vegetation phenology and productivity, we monitored spatial and temporal patterns of vegetation growth for a coastal wet sedge tundra site near Barrow, Alaska over three growing seasons (2000-2002). Contrary to expectation, earlier snowmelt did not lead to increased productivity. Instead, productivity was associated primarily with precipitation and soil moisture, and secondarily with growing degree days, which, during this period, led to reduced growth in years with earlier snowmelt. Additional moisture effects on productivity and species distribution, operating over a longer time scale, were evident in spatial NDVI patterns associated with microtopography. Lower, wetter regions dominated by graminoids were more productive than higher, drier locations having a higher percentage of lichens and mosses, despite the earlier snowmelt at the more elevated sites. These results call into question the oft-stated hypothesis that earlier arctic growing seasons will lead to greater vegetation productivity. Rather, they agree with an emerging body of evidence from recent field studies indicating that early-season, local environmental conditions, notably moisture and temperature, are primary factors determining arctic vegetation productivity. For this coastal arctic site, early growing season conditions are strongly influenced by microtopography, hydrology, and regional sea ice dynamics, and may not be easily predicted from snowmelt date or seasonal average air temperatures alone. Our comparison of field to satellite NDVI also highlights the value of in-situ monitoring of actual vegetation responses using field optical sampling to obtain detailed information on surface conditions not possible from satellite observations alone.

Growing↗

Global Relationships Among Traditional Reflectance Vegetation Indices (NDVI and NDII), Evapotranspiration (ET), and Soil Moisture Variability on Weekly Time Scales

Monitoring the effects of water availability on vegetation globally using satellites is important for applications such as drought early warning, precision agriculture, and food security as well as for more broadly understanding relationships between water and carbon cycles. In this global study, we examine how quickly several satellite-based indicators, assumed to have relationships with water availability, respond, on timescales of days to weeks, in comparison with variations in root-zone soil moisture (RZM) that extends to about 1 m depth. The satellite indicators considered are the normalized difference vegetation and infrared indices (NDVI and NDII, respectively) derived from reflectances obtained with moderately wide (20–40 nm) spectral bands in the visible and near-infrared (NIR) and evapotranspiration (ET) estimated from thermal infrared observations and normalized by a reference ET. NDVI is primarily sensitive to chlorophyll contributions and vegetation structure while NDII may contain additional information on water content in leaves and canopy. ET includes both the loss of root zone soil water through transpiration (modulated by stomatal conductance) as well as evaporation from bare soil. We find that variations of these satellite-based drought indicators on time scales of days to weeks have significant correlations with those of RZM in the same water-limited geographical locations that are dominated by grasslands, shrublands, and savannas whose root systems are generally contained within the 1 m RZM layer. Normalized ET interannual variations show generally a faster response to water deficits and enhancements as compared with those of NDVI and NDII, particularly in sparsely vegetated regions.

Joanna Joiner↗

On the Use of SMAP Soil Moisture for Forecasting NDVI Over CONUS Cropland Regions

Vegetation health forecasting (NDVI as a proxy) informs decision-makers about the end of season crop yield productivity but is not well-documented. This study tests improvements in vegetation health forecasting by developing a data-driven Dynamic Agricultural Productivity Indicator ( DAPI ), which simultaneously incorporates satellite-based root zone soil moisture (RZSM) and satellite-based NDVI data. RZSM is estimated via data assimilation of satellite based SMAP SM dataset. We employ the proposed DAPI forecast across four cropland types in CONUS, including corn, cotton, soybeans, and wheat. Results demonstrate superior performance of the DAPI forecasts compared to climatology-based NDVI forecasts, with the largest improvements in water-limited regions. DAPI shows particularly good performance during hydrologic disturbances such as floods and droughts. To this end, the DAPI approach is useful in estimating future vegetation health for identifying potential food-insecure areas, predicting crop price changes, and projecting expected commodities market trends.

Manh Le↗

Relative sensitivity of Normalized Difference Vegetation Index (NDVI) and Microwave Polarization Difference Index (MPDI) for vegetation and desertification monitoring

A simple equation relating the Microwave Polarization Difference Index (MPDI) and the Normalized Difference Vegetation Index (NDVI) is proposed which represents well data obtained from Nimbus 7/SMMR at 37 GHz and NOAA/AVHRR Channels 1 and 2. It is found that there is a limit which is characteristic of a particular type of cover for which both indices are equally sensitive to the variation of vegetation, and below which MPDI is more efficient than NDVI. The results provide insight into the relationship between water content and chlorophyll absorption at pixel size scales.

Becker, Francois↗

Integrated NDVI images for Niger 1986-1987

Two NOAA AVHRR images are presented which provide a comparison of the geographic distribution of an integration of the normalized difference vegetation index (NDVI) for the Sahel zone in Niger for the growing seasons of 1986 and 1987. The production of the images and the application of the images for resource management are discussed. Daily large area coverage with a spatial resolution of 1.1 km at nadir were transformed to the NDVI and geographically registered to produce the images.

Harrington, John A., Jr.↗

Monitoring of wildfires in boreal forests using large area AVHRR NDVI composite image data

Normalized difference vegetation index (NDVI) composite image data, produced from AVHRR data collected in 1990, were evaluated for locating and mapping the areal extent of wildfires in the boreal forests of Alaska during that year. A technique was developed to map forest fire boundaries by subtracting a late-summer AVHRR NDVI image from an early summer scene. The locations and boundaries of wildfires within the interior region of Alaska were obtained from the Alaska Fire Service, and compared to the AVHRR-derived fire-boundary map. It was found that AVHRR detected 89.5 percent of all fires with sizes greater than 2000 ha with no false alarms and that, for most cases, the general shape of the fire boundary detected by AVHRR matched those mapped by field observers. However, the total area contained within the fire boundaries mapped by AVHRR were only 61 percent of those mapped by the field observers. However, the AVHRR data used in this study did not span the entire time period during which fires occurred, and it is believed the areal estimates could be improved significantly if an expanded AVHRR data set were used.

Kasischke, Eric S.↗

Atmospheric effects on the NDVI - Strategies for its removal

The compositing technique used to derive global vegetation index (NDVI) from the NOAA AVHRR radiances reduces the residual effect of water vapor and aerosol on the NDVI. The reduction in the atmospheric effect is shown using a comprehensive measured data set for desert conditions, and a simulation for grass with continental aerosol. A statistical analaysis of the probability of occurrence of aerosol optical thickness and precipitable water vapor measured in different climatic regimes is used for this simulation. It is concluded that for a long compositing period (e.g., 27 days), the residual aerosol optical thickness and precipitable water vapor are usually too small to be corrected. For a 9-day compositing, the residual average aerosol effect may be about twice the correction uncertainty. For Landsat TM or Earth Observing System Moderate Resolution Imaging Spectrometer (EOS-MODIS) data, the newly defined atmospherically resistant vegetation index (ARVI) is more promising than possible direct atmospheric correction schemes, except for heavy desert dust conditions.

Kaufman, Y. J.↗

Data pre-processing: Stratospheric aerosol perturbing effect on the remote sensing of vegetation: Correction method for the composite NDVI after the Pinatubo eruption

An operational stratospheric correction scheme used after the Mount Pinatubo (Phillipines) eruption (Jun. 1991) is presented. The stratospheric aerosol distribution is assumed to be only variable with latitude. Each 9 days the latitudinal distribution of the optical thickness is computed by inverting radiances observed in the NOAA AVHRR channel 1 (0.63 micrometers) and channel 2 (0.83 micrometers) over the Pacific Ocean. This radiance data set is used to check the validity of model used for inversion by checking consistency of the optical thickness deduced from each channel as well as optical thickness deduced from different scattering angles. Using the optical thickness profile previously computed and radiative transfer code assuming Lambertian boundary condition, each pixel of channel 1 and 2 are corrected prior to computation of NDVI (Normalized Difference Vegetation Index). Comparison between corrected, non corrected, and years prior to Pinatubo eruption (1989 to 1990) NDVI composite, shows the necessity and the accuracy of the operational correction scheme.

Vermote, E.↗

Sensitivity of Climate to Changes in NDVI

The sensitivity of global and regional climate to changes in vegetation density is investigated using a coupled biosphere-atmosphere model. The magnitude of the vegetation changes and their spatial distribution are based on natural decadal variability of the normalized difference vegetation index (ndvi). Different scenarios using maximum and minimum vegetation cover were derived from satellite records spanning the period 1982-1990. Albedo decreased in the northern latitudes and increased in the tropics with increased ndvi. The increase in vegetation density revealed that the vegetation's physiological response was constrained by the limits of the available water resources. The difference between the maximum and minimum vegetation scenarios resulted in a 46% increase in absorbed visible solar radiation and a similar increase in gross photosynthetic C02 uptake on a global annual basis. This caused the canopy transpiration and interception fluxes to increase, and reduced those from the soil. The redistribution of the surface energy fluxes substantially reduced the Bowen ratio during the growing season, resulting in cooler and moister near-surface climate, except when soil moisture was limiting. Important effects of increased vegetation on climate are : (1) A cooling of about 1.8 K in the northern latitudes during the growing season and a slight warming during the winter, which is primarily due to the masking of high albedo of snow by a denser canopy. and (2) A year round cooling of 0.8 K in the tropics. These results suggest that increases in vegetation density could partially compensate for parallel increases in greenhouse warming . Increasing vegetation density globally caused both evapotranspiration and precipitation to increase. Evapotranspiration, however increased more than precipitation resulting in a global soil-water deficit of about 15 %. A spectral analysis on the simulated results showed that changes in the state of vegetation could affect the low-frequency modes of the precipitation distribution and might reduce its low frequency variability in the tropics while increasing it in northern latitudes.

Bounoua, L.↗

Monitoring 2009 Forest Disturbance Across the Conterminous United States, Based on Near-Real Time and Historical MODIS 250 Meter NDVI Products

This case study shows the promise of computing current season forest disturbance detection products at regional to CONUS scales. Use of the eMODIS expedited product enabled a NRT CONUS forest disturbance detection product, a requirement for an eventual, operational forest threat EWS. The 2009 classification product from this study can be used to quantify the areal extent of forest disturbance across CONUS, although a quantitative accuracy assessment still needs to be completed. However, the results would not include disturbances that occurred after July 27, such as the Station Fire. While not shown here, the project also produced maximum NDVI products for the June 10-July 27 period of each year of the 2000-2009 time frame. These products could be applied to compute forest change products on an annual basis. GIS could then be used to assess disturbance persistence. Such follow-on work could lead to attribution of year in which a disturbance occurred. These products (e.g., Figures 6 and 7) may also be useful for assessing forest change associated with climate change, such as carbon losses from bark beetle-induced forest mortality in the Western United States. Other MODIS phenological products are being assessed for aiding forest monitoring needs of the EWS, including cumulative NDVI products (Figure 10).

Spruce, J.↗

Variability of African Farming Systems from Phenological Analysis of NDVI Time Series

Food security exists when people have access to sufficient, safe and nutritious food at all times to meet their dietary needs. The natural resource base is one of the many factors affecting food security. Its variability and decline creates problems for local food production. In this study we characterize for sub-Saharan Africa vegetation phenology and assess variability and trends of phenological indicators based on NDVI time series from 1982 to 2006. We focus on cumulated NDVI over the season (cumNDVI) which is a proxy for net primary productivity. Results are aggregated at the level of major farming systems, while determining also spatial variability within farming systems. High temporal variability of cumNDVI occurs in semiarid and subhumid regions. The results show a large area of positive cumNDVI trends between Senegal and South Sudan. These correspond to positive CRU rainfall trends found and relate to recovery after the 1980's droughts. We find significant negative cumNDVI trends near the south-coast of West Africa (Guinea coast) and in Tanzania. For each farming system, causes of change and variability are discussed based on available literature (Appendix A). Although food security comprises more than the local natural resource base, our results can perform an input for food security analysis by identifying zones of high variability or downward trends. Farming systems are found to be a useful level of analysis. Diversity and trends found within farming system boundaries underline that farming systems are dynamic.

Vrieling, Anton↗

A Web Architecture to Geographically Interrogate CHIRPS Rainfall and eMODIS NDVI for Land Use Change

Monitoring of rainfall and vegetation over the continent of Africa is important for assessing the status of crop health and agriculture, along with long‐term changes in land use change. These issues can be addressed through examination of long‐term precipitation (rainfall) data sets and remote sensing of land surface vegetation and land use types. Two products have been used previously to address these goals: the Climate Hazard Group Infrared Precipitation with Stations (CHIRPS) rainfall data, and multi‐day composites of Normalized Difference Vegetation Index (NDVI) from the USGS eMODIS product. Combined, these are very large data sets that require unique tools and architecture to facilitate a variety of data analysis methods or data exploration by the end user community. To address these needs, a web‐enabled system has been developed to allow end‐users to interrogate CHIRPS rainfall and eMODIS NDVI data over the continent of Africa. The architecture allows end‐users to use custom defined geometries, or the use of predefined political boundaries in their interrogation of the data. The massive amount of data interrogated by the system allows the end‐users with only a web browser to extract vital information in order to investigate land use change and its causes. The system can be used to generate daily, monthly and yearly averages over a geographical area and range of dates of interest to the user. It also provides analysis of trends in precipitation or vegetation change for times of interest. The data provided back to the end‐user is displayed in graphical form and can be exported for use in other, external tools. The development of this tool has significantly decreased the investment and requirements for end‐users to use these two important datasets, while also allowing the flexibility to the end‐user to limit the search to the area of interest.

Burks, Jason E.↗

Assessing precipitation, evapotranspiration, and NDVI as controls of US Great Plains plant production

Productivity throughout the North American Great Plains grasslands is generally considered to be water limited, with the strength of this limitation increasing as precipitation decreases. We hypothesize that cumulative actual evapotranspiration water loss (AET) from April to July is the precipitation-related variable most correlated to aboveground net primary production (ANPP) in the U.S. Great Plains (GP). We tested this by evaluating the relationship of ANPP to AET, precipitation, and plant transpiration (Tr). We used multi-year ANPP data from five sites ranging from semiarid grasslands in Colorado and Wyoming to mesic grasslands in Nebraska and Kansas, mean annual NRCS ANPP, and satellite-derived normalized difference vegetation index (NDVI) data. Results from the five sites showed that cumulative April-to-July AET, precipitation, and Tr were well correlated (R2: 0.54–0.70) to annual changes in ANPP for all but the wettest site. AET and Tr were better correlated to annual changes in ANPP compared to precipitation for the drier sites, and precipitation in August and September had little impact on productivity in drier sites. April-to-July cumulative precipitation was best correlated (R2 = 0.63) with interannual variability in ANPP in the most mesic site, while AET and Tr were poorly correlated with ANPP at this site. Cumulative growing season (May-to-September) NDVI (iNDVI) was strongly correlated with annual ANPP at the five sites (R2 = 0.90). Using iNDVI as a surrogate for ANPP, we found that county-level cumulative April–July AET was more strongly correlated to ANPP than precipitation for more than 80% of the GP counties, with precipitation tending to perform better in the eastern more mesic portion of the GP. Including the ratio of AET to potential evapotranspiration (PET) improved the correlation of AET to both iNDVI and mean county-level NRCS ANPP. Accounting for how different precipitation-related variables control ANPP (AET in drier portion, precipitation in wetter portion) provides opportunity to develop spatially explicit forecasting of ANPP across the GP for enhancing decision-making by land managers and use of grassland ANPP for biofuels.

Maosi Chen↗

Remote monitoring of agricultural systems using NDVI time series and machine learning methods: a tool for an adaptive agricultural policy

This study aims to provide accurate information about changes in agricultural systems (AS) using phenological metrics derived from the NDVI time series. Use of such information could help land managers optimize land use choices and monitor the status of agricultural lands, under a variety of environmental and socioeconomic conditions. For this purpose, the Moderate Resolution Imaging Spectroradiometer (MODIS) NDVI data were used to derive phenological metrics over the Oum Er-Rbia basin (central Morocco). Random forest (RF), support vector machine (SVM), and K-nearest neighbor (KNN) classifiers were explored and compared on their ability to classify AS classes over the study area. Four main AS classes have been considered: (1) irrigated annual crop (IAC), (2) irrigated perennial crop (IPC), (3) rainfed area (RA), and (4) fallow (FA). By comparing the accuracy of the three classifiers, the RF method showed the best performance with an overall accuracy of 0.97 and kappa coefficient of 0.96.The RF method was then chosen to examine time variations in AS over a 16-year period (2000–2016). The AS main variations were detected and evaluated for the four AS classes. These variations have been found to be linked well with other indicators of local agricultural land management, as well as the historical agricultural drought changes over the study area. Overall, the results present a tool for decision makers to improve agricultural management and provide a different perspective in understanding the spatiotemporal dynamics of agricultural systems.

Youssef Lebrini↗

NDVI and Multispectral Images, UAS Flights, Council Road Site, Seward Peninsula, Alaska, June 2022

The dataset contains Normalized Difference Vegetation Index (NDVI) and multispectral images collected on June 18, 2022 using an UAS (Unmanned Aerial System) Yuneec H520, Mapir Survey 3, and Parrot Sequoia cameras. This data was created to accompany the following datasets:- NGEE Arctic CO2, CH4 and Energy Eddy-Covariance (EC) Flux Tower Auxiliary Measurements, Council Road Mile Marker 71, Seward Peninsula, Alaska (https://doi.org/10.5440/1526749)- Sun-induced chlorophyll fluorescence/eddy covariance measurements at NGEE Arctic Council site, Seward Peninsula, Alaska, 2022 (https://doi.org/10.15485/2466175)- NGEE Arctic Meteorological Data from Instrumented PCDC Stations, Council Site, Seward Peninsula, Alaska, 2018 - 2023 (https://doi.org/10.5440/1529604)Survey 3 is RGN (Red, Greeen, Near Infra Red) camera with 87° Horizontal Field of View (HFOV) (19mm) f/2.8 Aperture, 550nm/660nm/850nm (Red+Green+NIR) filter transmission and produced geo referenced jpg and raw format images. Parrot Sequoia is a camera with 16 megapixel RGB (Red, Green, Blue) sensor and 1.2 megapixel monochrome sensors in discrete spectral bands: Green (550nm - 40Nm Bandwidth), Red (660nm - 40nm Bandwidth), Red Edge (735nm - 10nm Bandwidth) and Near Infrared (790nm - 40nm Bandwidth).The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗