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At least 37 records · Page 2

Utah FORGE: Interferometric Synthetic Aperture Radar Data from 2023 and 2024

The dataset comprises Interferometric Synthetic Aperture Radar (InSAR) data from the TerraSAR-X and TanDEM-X satellite missions, covering the Utah FORGE site. This data includes interferometric pairs created using GMT-SAR processing software, chosen for their short orbital separations between May 1, 2023, and June 30, 2024. Included are various data and metadata, including Digital Elevation Models, unit vectors, and correlation coefficients. The dataset is packaged in several compressed tar files and formatted in NetCDF. To utilize this dataset, users will need software capable of handling NetCDF files and tools for decompressing tar files.

15 GEOTHERMAL ENERGY↗

Wave Measurements taken NW of Culebra Is., PR, 2023

Wave and sea surface temperature measurements collected by a Sofar Spotter buoy in 2023. The buoy was deployed on July 27, 2023 at 11:30 UTC northwest of Culebra Island, Puerto Rico, (18.3878 N, 65.3899 W) and recovered on Nov 5, 2023 at 12:45 UTC. Data are saved here in netCDF format, organized by month, and include directional wave statistics, GPS, and SST measurements at 30-minute intervals. Figures produced from these data are provided here as well. They include timeseries of wave height/period/direction and SST, GPS location, wave roses, and directional spectra. Additionally, raw CSV files from the Spotter's memory card can also be found below. NetCDF files can be read in python using the netCDF4 or Xarray packages, or through MATLAB using the "ncread()" command.

16 TIDAL AND WAVE POWER↗

Moving from HDF4 to HDF5/netCFD-4

In this presentation, we will go over the major differences between two file formats and libraries, and will talk about the HDF5 features that users should consider when designing new products in HDF5netCDF4. We will also discuss the h4h5tools toolkit that can facilitate conversion of data in the existing HDF4 files to HDF5 and netCDF-4, and we will engage the participants in the discussion of how The HDF Group can help with the transition and adoption of HDF5 and netCDF-4.

netCDF-4↗

I/O Bottleneck Detection and Tuning: Connecting the Dots using Interactive Log Analysis

Using parallel file systems efficiently is a tricky problem due to inter-dependencies among multiple layers of I/O software, including high-level I/O libraries (HDF5, netCDF, etc.), MPI-IO, POSIX, and file systems (GPFS, Lustre, etc.). Profiling tools such as Darshan collect traces to help understand the I/O performance behavior. However, there are significant gaps in analyzing the collected traces and then applying tuning options offered by various layers of I/O software. Seeking to connect the dots between I/O bottleneck detection and tuning, we propose DXT Explorer, an interactive log analysis tool. In this paper, we present a case study using our interactive log analysis tool to identify and apply various I/O optimizations. We report an evaluation of performance improvement achieved for four I/O kernels extracted from science applications.

Bez, Jean Luca↗

NLR Data Processing Pipeline for MADIS [SWR-26-050]

The NLR Data Processing Pipeline for MADIS software package is for downloading, processing, and performing QA/QC on MADIS data. Designed to handle the following steps: 1) Download all MADIS data as compressed netcdf files for a given time period. 2) Unpack netcdf files into timeseries csvs for each coordinate within the given bounding box. 3) Process the csvs to filter according to quality control checks and convert variables to correct units. 4) Write processed csvs to a single nc file.

Benton, Brandon [National Laboratory of the Rockie↗

Tidal Energy Resource Characterization, Bottom Lander Measurements, Cook Inlet, AK, 2021

These datasets are from tidal resource characterization measurements collected on the Terrasond High Energy Oceanographic Mooring (THEOM) from 1 July 2021 to 30 August 2021 (60 days) in Cook Inlet, Alaska. The lander was deployed at 60.7207031 N, 151.4294998 W in ~50 m of water. The dataset contains raw and processed data from the following two instruments: 1. A Nortek Signature 500 kHz acoustic Doppler current profiler (ADCP). Data were recorded in 4 Hz in the beam coordinate system from all 5 beams. Processed data has been averaged into 5 minutes bins and converted to the East-North-Up (ENU) coordinate system. 2. A Nortek Vector acoustic Doppler velocimeter (ADV). Data were recorded at 8 Hz in the beam coordinate system. Processed data has been averaged into 5 minutes bins and converted to the Streamwise - Cross-stream - Vertical (Principal) coordinate system. Turbulence statistics were calculated from 5-minute bins, with an FFT length equal to the bin length, and saved in the processed dataset. Data was read and analyzed using the DOLfYN (version 1.0.2) python package and saved in MATLAB (.mat) and netCDF (.nc) file formats. Files containing analyzed data (".b1") were standardized using the TSDAT (version 0.4.2) python package. NetCDF files can be opened using DOLfYN (e.g., `dat = dolfyn.load(''*.nc")`) or the xarray python package (e.g. `dat = xarray.open_dataset("*.nc"). All distances are in meters (e.g., depth, range, etc), and all velocities in m/s. See the DOLfYN documentation linked in the submission, and/or the Nortek documentation for additional details.

16 TIDAL AND WAVE POWER↗

Data, Photographs, Videos, and Information for the Niwot Ridge Subalpine Forest (US-NR1) AmeriFlux site

This data package contains data and information about the operation of the Niwot Ridge Subalpine Forest AmeriFlux site (US-NR1) between Nov 1998 to the present (2020). This data archive supplements the primary 30-min data storage for the US-NR1 data (i.e., https://doi.org/10.17190/AMF/1246088) by providing the following: (i) five-minute statistics (means, variances, covariances) of all data measured by the data system between Nov 1998 and September 2020 in netCDF format, (ii) CSV data files saved within the memory of the CR23X data loggers (as well as an archive of the data logger programs), (iii) an archive of previous 30-min ASCII data versions of the US-NR1 AmeriFlux data and information related to each data release (a replica of what can be found at http://urquell.colorado.edu/data_ameriflux/), (iv) a web calendar (in HTML format) documenting activity at the site (a replica of http://urquell.colorado.edu/calendar/), (v) photos (over 15,000) and video taken at the site between years 2001 and present day (2020), and (vi) several auxiliary datasets, primary related to trees near the site, soil moisture and soil temperature, and subcanopy radiation data. The data package is setup so that the web calendar, photos, and electronic logbook can be easily accessed on a local computer using a web browser. The provided data files are in either netCDF, CSV, ASCII, or MATLAB format. To obtain a better understanding about the archive, please start by reading the PDF: README_ESS_DIVE_USNR1_readme_first.pdf.

54 ENVIRONMENTAL SCIENCES↗

Model simulations of Plum Island Ecosystems LTER low marsh site using ELM-PFLOTRAN

Model simulations using the E3SM Land Model (ELM) coupled to the PFLOTRAN reactive transport model via the Alquimia interface. The simulations were conducted for a tidal salt marsh at the Plum Island Ecosystems LTER near Rowley, Massachusetts, USA. Model simulations were forced using site-specific tidal cycles and salinity, and the simulations used a biogeochemical reaction network including aerobic decomposition, sulfate reduction, iron reduction, and methanogenesis. Model outputs include simulated carbon stocks, carbon dioxide and methane fluxes, and porewater concentrations of key solutes related to sulfur, iron, and carbon cycling. The model simulations included a saline simulation (with tidal sulfate inputs), a fresh simulation (with low salinity and low sulfate inputs), and a saline simulation with lower vegetation productivity to represent the effect of salinity on vegetation. These simulations were conducted to demonstrate that a new model framework incorporating subsurface redox and biogeochemical interactions into a land surface model could reproduce measured surface greenhouse gas fluxes and biogeochemical dynamics in tidal marsh ecosystems, and to test whether including redox interactions in a land surface model would allow the model to resolve contrasts in biogeochemical cycling and greenhouse gas production between saline and freshwater wetlands.The data package includes gzipped tar archives (which can be expanded using standard tar and gzip utilities) of model outputs from three model configurations: saline subsurface and reduced vegetation productivity related to salinity; saline subsurface with vegetation productivity not reduced; and freshwater. Also included are code for the modified E3SM model, Alquimia interface, and PFLOTRAN reactive transport simulator in gzipped tar format; plain text parameter and configuration files; python code files for visualizing model output and defining model configurations; and model output, tide and salinity forcing, and configuration files in netCDF format. See the README.md file in the data package for a detailed description of all files contained in the package. All files are in netCDF (.nc), gzipped tar archive (.tar.gz or .tgz), or text (all other files).Updated: May 13, 2024. Model output, E3SM code, PFLOTRAN input files, and python codes for visualizing results were updated to reflect changes made for the manuscript revision. The updated archive reflects the code and model output from the final accepted manuscript. Changes included updated reaction parameters reflecting improved parameterization and additional comparisons with field measurements. E3SM code changes included better support for multiple grid cells and improved flow and transport parameterization.

54 ENVIRONMENTAL SCIENCES↗

Upper-air soundings collected during the CROCUS Urban Canyons 2024 campaign in Chicago, Illinois USA

Funded by the Department of Energy’s Office of Science, Biological and Environmental Research program, Community Research on Climate and Urban Science (CROCUS) studies urban climate change and the impact it has on communities, with particular focus on disinvested, under-resourced communities. This information leads to new insights on urban climate challenges and informs future actions for mitigating and adapting to climate change at the street, neighborhood and regional levels.As part of the CROCUS effort, the Urban Canyons 2024 project was undertaken to study conditions at unprecedented detail over various neighborhoods in Chicago, Illinois. This dataset consists of upper air soundings that were collected as part of this effort. Soundings were launched during two intensive observing periods, IOP1 occurred on 22-23 July 2024, while IOP2 occurred on 27-28 July 2024. For IOP1, soundings were launched at coordinated times from three sites, Shedd Aquarium in Downtown Chicago, Abizu Campus High School in Humboldt Park, and Gary Comer Youth Center in West Woodlawn. For IOP2, the Gary Comer site was replaced by a neighborhood site in West Woodlawn, Chicago. The Abizu Campos site was operated by Valparaiso University and used iMET-4 rawinsondes, the other sites were operated by the University of Illinois Urbana-Champaign and used GRAW DFM-19 sondes.This dataset contains netCDF files containing quality-controlled temperature, dewpoint, geopotential height, pressure, and vector wind measurements at 1 second intervals following launch. These files are readable by the open-source netCDF software libraries available in many software packages (i.e., python, R, fortran, C++, etc.). The dataset also contains quicklook plots of each launch on a skew-T log-p thermodynamic diagram. These are in png format viewable by most web browsers.

54 ENVIRONMENTAL SCIENCES↗

CROCUS Air Quality Data at Argonne National Laboratory Prairie Site

The AQT (Vaisala AQT530) instrument provides observations on meteorological conditions, including particulate matter (PM2.5, PM10), gas species concentrations (NO, NO2, O3, CO), and environment temperature and moisture. These measurements are critical for understanding air quality. These measurements are useful for understanding changes in aerosol properties, air quality research, and comparing to model experiments especially in urban environments. These measurements are collected at the Argonne Testbed for Multiscale Observational Science (ATMOS), a prairie field site at Argonne National Laboratory in Lemont, Illinois. Data is available in the netCDF data format, we encourage data users review documentation through Project Pythia to understand how to work with netCDF data https://foundations.projectpythia.org/core/data-formats/netcdf-cf.html. Each file contains one day's worth of data (24 hours, starting at 0000 UTC). The data is aggregated into daily frequency to make it easier to process multiple days, and compress the higher-resolution fields. File naming convention includes the project (CROCUS), location (atmos), data level (raw, a1), date (year, month, day), and hour (0000).

54 ENVIRONMENTAL SCIENCES↗

CROCUS Weather Data at Chicago State University Prairie Site

Vaisala WXT sensor is an all-in-one weather instrument that provides 6 of the most important weather parameters: barometric pressure, temperature, relative humidity, rainfall, wind speed and direction. Temperature, pressure, relative humidity, and rainfall are sampled at 1 second frequency, while wind speed/direction is measured at ten per second (10Hz) frequency. These measurements are useful for looking at characterizing local weather, identifying unique weather events, and studying local turbulence, especially given the high temporal resolution of the wind measurements. These measurements are collected at Chicago State University (CSU) at a prarie site on campus in Chicago, Illinois. Data is available in the netCDF data format, we encourage data users review documentation through Project Pythia to understand how to work with netCDF data https://foundations.projectpythia.org/core/data-formats/netcdf-cf.html. The data is aggregated into daily frequency to make it easier to process multiple days, and compress the higher-resolution fields. Each file contains one day's worth of data (24 hours, starting at 0000 UTC). File naming convention includes the project (CROCUS), location (CSU), data level (raw, a1), date (year, month, day), and hour (0000).

54 ENVIRONMENTAL SCIENCES↗

CROCUS Weather Data at Argonne National Laboratory Prairie Site

Vaisala WXT sensor is an all-in-one weather instrument that provides 6 of the most important weather parameters: barometric pressure, temperature, relative humidity, rainfall, wind speed and direction. Temperature, pressure, relative humidity, and rainfall are sampled at 1 second frequency, while wind speed/direction is measured at ten per second (10Hz) frequency. These measurements are useful for looking at characterizing local weather, identifying unique weather events, and studying local turbulence, especially given the high temporal resolution of the wind measurements. These measurements are collected at the Argonne Testbed for Multiscale Observational Science (ATMOS), a prairie field site at Argonne National Laboratory in Lemont, Illinois. Data is available in the netCDF data format, we encourage data users review documentation through Project Pythia to understand how to work with netCDF data https://foundations.projectpythia.org/core/data-formats/netcdf-cf.html. The data is aggregated into daily frequency to make it easier to process multiple days, and compress the higher-resolution fields. Each file contains one day's worth of data (24 hours, starting at 0000 UTC). File naming convention includes the project (CROCUS), location (atmos), data level (raw, a1), date (year, month, day), and hour (0000).

54 ENVIRONMENTAL SCIENCES↗

CROCUS Weather Data at University of Illinois - Chicago Tower

Vaisala WXT sensor is an all-in-one weather instrument that provides 6 of the most important weather parameters: barometric pressure, temperature, relative humidity, rainfall, wind speed and direction. Temperature, pressure, relative humidity, and rainfall are sampled at 1 second frequency, while wind speed/direction is measured at ten per second (10Hz) frequency. These measurements are useful for looking at characterizing local weather, identifying unique weather events, and studying local turbulence, especially given the high temporal resolution of the wind measurements. These measurements are collected at the University of Illinois in Chicago, Illinois, on the meteorological tower near the greenhouse on campus. Data is available in the netCDF data format, we encourage data users review documentation through Project Pythia to understand how to work with netCDF data https://foundations.projectpythia.org/core/data-formats/netcdf-cf.html. File naming convention includes the project (CROCUS), location (UIC), data level (raw, a1), date (year, month, day), and hour (0000).

54 ENVIRONMENTAL SCIENCES↗

CROCUS Air Quality Data at University of Illinois - Chicago Tower

The AQT (Vaisala AQT530) instrument provides observations on meteorological conditions, including particulate matter (PM2.5, PM10), gas species concentrations (NO, NO2, O3, CO), and environment temperature and moisture. These measurements are critical for understanding air quality. These measurements are useful for understanding changes in aerosol properties, air quality research, and comparing to model experiments especially in urban environments. These measurements are collected at the University of Illinois in Chicago, Illinois, on the meteorological tower near the greenhouse on campus. Data is available in the netCDF data format, we encourage data users review documentation through Project Pythia to understand how to work with netCDF data https://foundations.projectpythia.org/core/data-formats/netcdf-cf.html. Each file contains one day's worth of data (24 hours, starting at 0000 UTC). File naming convention includes the project (CROCUS), location (UIC), data level (raw, a1), date (year, month, day), and hour (0000).

54 ENVIRONMENTAL SCIENCES↗

GNSS-based Vegetation Optical Depth, Tree Sway, and Evapotranspiration data from the Niwot Ridge Subalpine Forest (US-NR1) AmeriFlux site

This data package contains data and information about Global Navigation Satellite System (GNSS)-based Vegetation Optical Depth (VOD), tree sway motion, and eddy-covariance evapotranspiration (ET) data collected at the Niwot Ridge Subalpine Forest AmeriFlux site (US-NR1). The raw GNSS data were collected between May 2022 and August 2023. Other processed datasets such as tree sway motion and ET data are also included. The goal was to study the water content within a subalpine forest and, more specifically, examine the canopy evaporation process. This data archive includes all data that were used within the following Biogeosciences discussion paper that further summarizes the research objectives and conclusions:Burns, S.P., V. Humphrey, E.D. Gutmann, M.S. Raleigh, D.R. Bowling, and P.D. Blanken, 2025: Using GNSS-based vegetation optical depth, tree sway motion, and eddy-covariance to examine evaporation of canopy-intercepted rainfall in a subalpine forest. EGUsphere [preprint],https://doi.org/10.5194/egusphere-2025-1755This data archive also supplements the 30-min Lawrence Berkeley National Laboratory (LBNL) AmeriFlux dataset for US-NR1 (i.e., https://doi.org/10.17190/AMF/1246088) and updates what was in the 2020 ESS-DIVE US-NR1 archive (https://doi.org/10.15485/1671825) to include data from the years 2020-2025. More specifically, the following updates are provided: (i) five-minute statistics (means, variances, covariances) of all data measured by the US-NR1 data system between Sep 2020 and Jun 2025 in netCDF format, (ii) the electronic logbook of US-NR1 site visits, (iii) a web calendar (in HTML format) documenting activity at the site (a replica of https://urquell.colorado.edu/calendar/), (iv) photos taken at the site between years 2020 and present day (Aug 2025), and (v) several auxiliary datasets, primary related to trees near the site, soil properties, soil moisture and soil temperature, and subcanopy radiation data. The data package is setup so that the web calendar, photos, and electronic logbook can be easily accessed on a local computer using a web browser. The provided data files are in either BINEX or SBF format (for the raw GNSS data), netCDF, CSV, ASCII, or MATLAB format. To obtain a better understanding about the archive, please start by reading the following PDF which is included within the data archive:README_ESS_DIVE_USNR1_2025_readme_first.pdf.

54 ENVIRONMENTAL SCIENCES↗

CROCUS Optical All Precipitation Gauge Data at Argonne National Laboratory Prairie Site

The APG (Optical Scientific Inc. All-Precipitation Gauge 815-DS) dataset contains one-minute measurements of precipitation rate, precipitation accumulation, air temperature, and present weather detection, both in 4680 format and decoded. Data were collected at the Argonne Testbed for Multiscale Observational Science (ATMOS), a 20-acre prairie site at Argonne National Laboratory in Lemont, Illinois. The data is presented as daily NetCDF (.nc) files, each containing approximately 24 hours of observations. Files follow the naming convention of: the project (CROCUS), location (atmos), instrument name (apg), data level (raw, a1), and date (year, month, day). The NetCDF format can be accessed using common scientific software such as Python using xarray, netCDF4 or act-doe.

54 ENVIRONMENTAL SCIENCES↗

CROCUS Tipping Bucket Rain Gauge Data at Argonne National Laboratory Prairie Site

The Tipping Bucket Rain Gauge (TBRG) dataset contains data from both the Nova-Lynx 12 inch TBRG and the Met One 8-inch TBRG. The dataset contains one minute measurements for precipitation accumulation measured in that timeframe from both instruments. Each TBRG was equipped with heaters for all-season measurements. These data are helpful for identifying periods of drought, potential flooding, and general input for water budgets. TBRGs can be used to validate optical rain gauge data and disdrometer data collected during the CROCUS project. Data were collected at the Argonne Testbed for Multiscale Observational Science (ATMOS), a 20-acre prairie site at Argonne National Laboratory in Lemont, Illinois. The data is presented as daily NetCDF (.nc) files, each containing approximately 24 hours of observations. Files follow the naming convention of: the project (CROCUS), location (atmos), instrument name (tbrg), data level (raw, a1), and date (year, month, day). The NetCDF format can be accessed using common scientific software such as Python using xarray, netCDF4 or act-doe.

1-min Precipitation Accumulation↗

ELM model simulations of Plum Island Ecosystems LTER low marsh site 2018-2020

Model simulations using the Department of Energy's Energy Exascale Earth System Model (E3SM) land model (ELM) with improved capabilities to represent vegetation response to salinity and inundation. The simulations were conducted for a tidal salt marsh at Plum Island Ecosystems Long Term Ecological Research (LTER) site near Rowley, Massachusetts, USA; the site is a low marsh dominated by Spartina alterniflora. The model was forced with site-specific meteorology, salinity and tidal cycles from 2018-2020. Four sets of model simulations are included and described below:1. Parameterization of the salinity response function. These simulations tested different combinations of values for optimal salinity and salinity tolerance.2. Model evaluation. This comparison conducted simulations using the default model, the salinity function only, the submergence function only, and both the salinity and submergence functions. 3. Salinity scenarios. These simulations used the 2018 salinity input data varied by -5 to +10 ppt salinity.4. Water level scenarios. These simulations used the tide height varied by -10 to +50 cm. These simulations were used to demonstrate how the salinity and submergence functions better represent carbon uptake by tidal salt marshes.The data package includes netCDF files used as forcing files for tide height and salinity, one for each year 2018-2020 at observed salinity concentrations, and an additional three forcing files in which salinity concentrations were varied 5 ppt lower, 5 ppt higher, and 10 ppt higher than the measured 2018 time series. Also included are python scripts for creating forcing files, plain text parameter and command files for running simulations, model outputs in netCDF format, and python scripts for visualizing outputs. Code for the modified E3SM model is archived in Sulman et al 2023 at doi:10.15485/1991625. More detail about files is provided in the README.md file.

54 ENVIRONMENTAL SCIENCES↗