Sixty-Five Million Years of Change in Temperature and Topography Explain Evolutionary History in Eastern North American Plethodontid Salamanders
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Environmental Sciences & Ecology↗
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Eurycea lucifuga (Cave Salamander). Diet.
Eurycea lucifuga is a common and widespread facultative inhabitant of caves and springs in the southeastern and central United States (Powell et al. 2016. Peterson Field Guide to Reptiles and Amphibians of Eastern and Central North America. Houghton Mifflin Harcourt, Boston, Massachusetts. 512 pp.). This species is known to feed on a variety of invertebrates, such as snails, crustaceans, beetles, and flies (Peck 1974. Nat. Speleol. Soc. Bull. 36:7–10). Although several millipede species also can serve as prey for E. lucifuga, some are presumably avoided due to the presence of defensive secretions (e.g., Abacionidae, Paradoxosomatidae). Captive feeding trials and field study show that E. lucifuga do not actively prey upon cave-obligate Tetracion millipedes, which produce defensive secretions comprised primarily of the compound p-cresol (Peck and Richardson 1976. Annales de Speleologie 31:175–182). On the other hand, Pseudotremia millipedes, which do not possess chemical defenses, are a significant component of the diet of cave-dwelling E. lucifuga (Peck and Richardson 1976, op. cit.)
59 BASIC BIOLOGICAL SCIENCES↗
Aneides aeneus (Green Salamander). Geographic distribution note (new county record: Roane, Tennessee, USA)
The individual was found in atypical habitat that consisted of a low-lying wet weather conveyance in second growth forest, which lacked any nearby rock outcrops or other consolidated rock larger than 25 cm in greatest length. Despite repeated searches during summer 2019, additional individuals were not found at this site.
Carter, Evin↗
Subterranean Colonization and Diversification of Cave-Dwelling Salamanders
Explore the source record for details and available documents.
Niemiller, Matthew L.↗
An open-source hybrid unstructured mesh - CAD fusion multiphysics analysis workflow in SALAMANDER
Plasma facing components in fusion devices will endure extreme neutron and heat fluxes. To facilitate their design using simulation tools, the open-source Fusion Module, Fusion ENergy Integrated multiphys-X (FENIX) framework is being developed to model these components with a high-fidelity multi-physics multi-dimensional approach. It can iteratively resolve couplings between all the physics at play, from neutron radiation, to thermomechanics, to near-wall plasma dynamics. This framework is based on the Multiphysics Object Oriented Simulation Environment (MOOSE), which is developed by a collaboration of US National Laboratories since 2008, for advanced nuclear, geomechanics simulations and other applications. FENIX couples numerous simulation tools, including OpenMC, the Tritium Migration Analysis Program v8, the NekRS CFD software, and most MOOSE modules. For the coupling of radiation transport and other physics, FENIX supports a hybrid workflow between Computer Assisted Design (CAD) and unstructured mesh geometries. The CAD can be generated from skinning the unstructured mesh, to enable a coarse geometry for efficient particle transport, but still resolving the local material compositions and temperature gradients. Neutron transport is performed using DAGMC on the CAD, and Cardinal, integrated in FENIX, maps tallied quantities, such as the heat deposition or the tritium generation rates, from a tally volumetric mesh to the other physics’ unstructured mesh. This coupling was exercised on a simplified tokamak geometry, coupling neutron transport with the heat conduction equation, and on a monoblock divertor problem, coupling additionally with tritium migration. Mesh convergence studies highlight the importance of the mapping conservativeness. Coupling with thermo-mechanics is further enabled by the generalization of the approach to moving meshes. The presentation will include these coupled analysis as well as an update on status of the FENIX framework.
70 - PLASMA PHYSICS AND FUSION TECHNOLOGY↗
Ecological connectivity and in-kind mitigation in a regulatory decision framework: A case study with an amphibian habitat specialist
Ecological connectivity is critical to the survival and long-term viability of populations but is often overlooked in regulatory frameworks. We integrated landscape-level processes into a mitigation strategy for impacts to aquatic resources on the U.S. Department of Energy (DOE) Oak Ridge Reservation (ORR) in eastern Tennessee. Wetlands on the ORR, which contain significant breeding populations of the imperiled four-toed salamander (Hemidactylium scutatum) and tubercled rein orchid (Platanthera flava var. herbiola), will be impacted by construction of an environmental waste disposal facility under the Comprehensive Environmental Response, Compensation, and Liability Act of 1980 (CERCLA). Here, we used a modified Kepner-Tregoe decision analysis to select general mitigation options that balanced regulatory requirements and interest group perspectives. We emphasized habitat connectivity through models that prioritized an area's importance to natural area connectivity (centrality) and maintenance of population structure for an affected habitat specialist (four-toed salamanders). We also emphasized in-kind mitigation through the preservation and enhancement of ecologically similar resources and the translocation and establishment of a new subpopulation of four-toed salamanders elsewhere on the ORR. We ultimately released over 500 juvenile salamanders that originated from the impacted site into the chosen mitigation wetlands. By doing so under the constraints of a time-sensitive CERCLA remediation effort and exceeding its substantive requirements, this work underscores feasibility. Ecological connectivity and the conservation of species that are not afforded explicit regulatory processes can be effectively and efficiently integrated into environmental decision-making and land use planning.
54 ENVIRONMENTAL SCIENCES↗
Radiocesium ( 137 Cs) concentrations in the two-toed amphiuma (Amphiuma means) and the lesser siren (Siren intermedia)
This study sought to determine radiocesium ( 137 Cs) concentrations in two species of aquatic salamanders – the two-toed amphiuma (Amphiuma means) and the lesser siren (Siren intermedia) on the Savannah River Site. Concentrations ( 137 Cs Bq/g, dry wt) of the two species were similar at both 137 Cs-contaminated (A. means = 0.733 ± 0.242, n = 5; S. intermedia = 0.839 ± 0.722, n = 5) and reference sites (A. means = 0.028 ± 0.020, n = 5; S. intermedia = 0.042 ± 0.027, n = 11). Salamanders captured in areas impacted by 137 Cs contamination exhibited significantly higher 137 Cs concentrations than individuals captured at reference sites (U = 146, p < 0.001). Salamander size (snout-vent length) was not correlated with whole-body 137 Cs. An analysis of our data using the ERICA tool suggests that negative impacts due to 137 Cs exposure are unlikely in these species. Overall, these data indicate that A. means and S. intermedia inhabiting contaminated sites bioaccumulate but do not biomagnify 137 Cs.
63 RADIATION, THERMAL, AND OTHER ENVIRON. POLLUTAN↗
Kinetic Plasma Simulation Capabilities in the MOOSE Framework: Verification of Particle-Particle Collisions
High-fidelity simulations of complex plasma systems allow researchers to gain key insights into and understanding of these systems. To facilitate massively parallel high-fidelity plasma simulations, finite-element-based particle-in-cell capabilities are being developed within the open-source Multiphysics Object-Oriented Simulation Environment (MOOSE) based framework called Software for Advanced Large-scale Analysis of MAgnetic confinement for Numerical Design, Engineering & Research (SALAMANDER). While SALAMANDER’s primary objective is modeling edge plasmas and plasma-facing components in fusion devices, the particle-in-cell capabilities being developed are general and will support modeling low-temperature plasmas as well. Previously, collisionless magnetostatic simulation capabilities have been verified with the two-stream and Dorey-Guest-Harris instabilities, and single particle motion. Collisions were implemented using the direct simulation Monte Carlo method, and verification of this capability will be presented here several verification problems: relaxation of a randomly initialized gas to a Maxwellian distribution, Fourier heat flow, and comparison of reaction rates to both analytic calculations and those calculated using a multi-term Boltzmann solver.
70 - PLASMA PHYSICS AND FUSION TECHNOLOGY↗
Scavenging along an ecological interface: utilization of amphibian and reptile carcasses around isolated wetlands
Abstract Scavenging is an influential ecosystem process, providing many weak, but stabilizing food web links. Amphibians and reptiles (i.e., herpetofauna) utilize land/water interfaces and can have large biomasses concentrated here, making them important vectors of nutrients between aquatic and terrestrial systems and a valuable resource to scavengers. There are limited data on the fate of herpetofauna carrion, and thus, it is unknown how such carcasses are incorporated into food webs or how habitat and carcass characteristics influence which scavengers acquire these resources. We used camera traps to determine the proportion of experimental amphibian and reptile carcasses (lizards, salamanders, frogs, and toads) scavenged by vertebrates and invertebrates in two different habitats (wetland and upland) during the spring in the southeastern USA . Vertebrates removed 19.8% of all herpetofauna carcasses in both habitats, with the remaining carcasses removed by invertebrates (80.2%). We used log‐linear models to evaluate the impact of habitat and carcass type on scavenging. We determined that habitat, but not carcass type, was influential in determining whether a vertebrate or invertebrate scavenged a carcass, with vertebrates able to scavenge more carcasses in wetland than in upland areas. In less than two days, 86.2% of all carcasses in both habitat types were completely scavenged, and carcasses in wetlands were removed more quickly, suggesting intense competition between vertebrates and invertebrates. Additionally, we observed low vertebrate scavenger richness, which we attribute to high invertebrate activity in the spring and the small size of the herpetofauna carcasses (<100 g). We identified the scavenging pathways along which herpetofauna are incorporated into the food web and the factors that influence those pathways, suggesting the large extent and spatial scale of this resource's influence on food web connections and consequently food web and ecosystem stability.
54 ENVIRONMENTAL SCIENCES↗
2010 Dry and 2009 - 2010 Wet Season Branchiopod Survey Report, Site 300
Lawrence Livermore National Laboratory (LLNL) requested that Condor Country Consulting, Inc. (CCCI) perform wet season surveys and manage the dry season sampling for listed branchiopods in two ponded locations within the Site 300 Experimental Test Site. Site 300 is located in Alameda and San Joaquin Counties, located between the Cities of Livermore and Tracy. The two pool locations have been identified for possible amphibian enhancement activities in support of the Compensation Plan for impacts tied to the Building 850 soil clean-up project. The Building 850 project design resulted in formal consultation with the U.S. Fish and Wildlife Service (USFWS) as an amendment (File 81420-2009-F-0235) to the site-wide Biological Opinion (BO) (File 1-1-02-F-0062) in the spring of 2009 and requires mitigation for the California tiger salamander (AMCA, Ambystoma californiense) and California red-legged frog (CRLF, Rana draytonii) habitat loss. Both pools contain breeding AMCA, but do not produce metamorphs due to limited hydroperiod. The pool to the southeast (Pool BC-FS-2) is the preferred site for amphibian enhancement activities, and the wetland to northwest (Pool OA-FS-1) is the alternate location for enhancement. However, prior to enhancement, LLNL has been directed by USFWS (BO Conservation Measure 17 iii) to 'conduct USFWS protocol-level branchiopod surveys to determine whether listed brachiopod species are present within the compensation area.' CCCI conducted surveys for listed branchiopods in the 2009-2010 wet season to determine the presence of federally-listed branchiopods at the two pools (previous surveys with negative findings were performed by CCCI in 2001-2002 and 2002-2003 onsite). Surveys were conducted to partially satisfy the survey requirements of the USFWS 'Interim Survey Guidelines to Permittees for Recovery Permits under Section 10(a)(1)(A) of the Endangered Species Act for the Listed Vernal Pool Branchiopods' ('Guidelines, USFWS 1996 and BO Conservation Measure 17 iii). The dry sampling (included as an Appendix D) followed the wet season surveys in the summer of 2010.
54 ENVIRONMENTAL SCIENCES↗
Pastures to Prairies to Pools: An Update on Natural Resource Damages Settlement Projects at the Fernald Preserve - 13198
The DOE Office of Legacy Management oversees implementation and monitoring of two ecological restoration projects at the Fernald Preserve, Fernald, Ohio, that are funded through a CERCLA natural resource damage settlement. Planning and implementation of on-property ecological restoration projects is one component of compensation for natural resource injury. The Paddys Run Tributary Project involves creation of vernal pool wetland habitat with adjacent forest restoration. The Triangle Area Project is a mesic tall-grass prairie establishment, similar to other efforts at the Fernald Preserve. The goal of the Fernald Natural Resource Trustees is to establish habitat for Ambystomatid salamander species, as well as grassland birds. Field implementation of these projects was completed in May 2012. Herbaceous cover and woody vegetation survival was determined in August and September 2012. Results show successful establishment of native vegetation. Additional monitoring will be needed to determine whether project goals have been met. As with the rest of the Fernald Preserve, ecological restoration has helped turn a DOE liability into a community asset. (authors)
54 ENVIRONMENTAL SCIENCES↗
Wetland Mitigation Monitoring at the Fernald Preserve - 13200
The U.S. Department of Energy is responsible for 7.2 hectares (17.8 acres) of mitigation wetland at the Fernald Preserve, Ohio. Remedial activities affected the wetlands, and mitigation plans were incorporated into site-wide ecological restoration planning. In 2008, the Fernald Natural Resource Trustees developed a comprehensive wetland mitigation monitoring approach to evaluate whether compensatory mitigation requirements have been met. The Fernald Preserve Wetland Mitigation Monitoring Plan provided a guideline for wetland evaluations. The Ohio Environmental Protection Agency (Ohio EPA) wetland mitigation monitoring protocols were adopted as the means for compensatory wetland evaluation. Design, hydrologic regime, vegetation, wildlife, and biogeochemistry were evaluated from 2009 to 2011. Evaluations showed mixed results when compared to the Ohio EPA performance standards. Results of vegetation monitoring varied, with the best results occurring in wetlands adjacent to forested areas. Amphibians, particularly ambystomatid salamanders, were observed in two areas adjacent to forested areas. Not all wetlands met vegetation performance standards and amphibian biodiversity metrics. However, Fernald mitigation wetlands showed substantially higher ratings compared to other mitigated wetlands in Ohio. Also, soil sampling results remain consistent with other Ohio mitigated wetlands. The performance standards are not intended to be 'pass/fail' criteria; rather, they are reference points for use in making decisions regarding future monitoring and maintenance. The Trustees approved the Fernald Preserve Wetland Mitigation Monitoring Report with the provision that long-term monitoring of the wetlands continues at the Fernald Preserve. (authors)
12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
Summary of the Snowmastodon Project Special Volume A high-elevation, multi-proxy biotic and environmental record of MIS 6–4 from the Ziegler Reservoir fossil site, Snowmass Village, Colorado, USA
Abstract In North America, terrestrial records of biodiversity and climate change that span Marine Oxygen Isotope Stage (MIS) 5 are rare. Where found, they provide insight into how the coupling of the ocean–atmosphere system is manifested in biotic and environmental records and how the biosphere responds to climate change. In 2010–2011, construction at Ziegler Reservoir near Snowmass Village, Colorado (USA) revealed a nearly continuous, lacustrine/wetland sedimentary sequence that preserved evidence of past plant communities between ~140 and 55 ka, including all of MIS 5. At an elevation of 2705 m, the Ziegler Reservoir fossil site also contained thousands of well-preserved bones of late Pleistocene megafauna, including mastodons, mammoths, ground sloths, horses, camels, deer, bison, black bear, coyotes, and bighorn sheep. In addition, the site contained more than 26,000 bones from at least 30 species of small animals including salamanders, otters, muskrats, minks, rabbits, beavers, frogs, lizards, snakes, fish, and birds. The combination of macro- and micro-vertebrates, invertebrates, terrestrial and aquatic plant macrofossils, a detailed pollen record, and a robust, directly dated stratigraphic framework shows that high-elevation ecosystems in the Rocky Mountains of Colorado are climatically sensitive and varied dramatically throughout MIS 5.
99 GENERAL AND MISCELLANEOUS↗
Asynchronous demographic responses to Pleistocene climate change in Eastern Nearctic vertebrates
Abstract Pleistocene climatic cycles altered species distributions in the Eastern Nearctic of North America, yet the degree of congruent demographic response to the Pleistocene among codistributed taxa remains unknown. We use a hierarchical approximate Bayesian computational approach to test if population sizes across lineages of snakes, lizards, turtles, mammals, birds, salamanders and frogs in this region expanded synchronously to Late Pleistocene climate changes. Expansion occurred in 75% of 74 lineages, and of these, population size trajectories across the community were partially synchronous, with coexpansion found in at least 50% of lineages in each taxonomic group. For those taxa expanding outside of these synchronous pulses, factors related to when they entered the community, ecological thresholds or biotic interactions likely condition their timing of response to Pleistocene climate change. Unified timing of population size change across communities in response to Pleistocene climate cycles is likely rare in North America.
Burbrink, Frank T.↗
Droughts Reduce Growth Rates and Increase Vulnerability to Increasingly Frequent and Severe Drying Events in an Aquatic Ectotherm
Many aquatic organisms are experiencing increasingly severe and frequent droughts and drying events. Simultaneously, drought effects are carrying over to nondrought years as ecosystems remain in incomplete states of recovery. Aquatic organisms are thus faced with fewer sequential years under degraded environmental conditions to prepare for increasingly severe droughts and potential drying events. We assessed the effect of droughts and sex on the growth, mass, and mass-dependent estivation potential of long-lived aquatic salamanders (Greater Sirens, Siren lacertina) that estivate during drying events brought on by severe droughts. We calculated growth rates of S. lacertina based on mark–recapture data spanning 11 yr of a severe drought local minimum (of past 50 yr) in the southeastern United States. Sirens showed a distinct seasonal gain in body length and mass from March through September and little growth for the rest of the year. Gains during the growth season were strongly reduced by drought conditions. Although male and female sirens were predicted to reach a similar maximum body size, females grew much slower. Recruitment into drying event ‘‘size refugia’’ is constrained by drying event severity (determines minimum size required), frequency (determines available time between events to grow), and environmental conditions between drying events (determines the rate of growth). Thus, increases in drying event severity and frequency will require faster growth to a larger body size for successful recruitment into a size class that is resistant to drying events. The slower growth of females and reduction of growth during suboptimal years (mild to moderate droughts) suggest that the life history strategy of Greater Sirens for persisting through drying events potentially increases their demographic susceptibility to the predicted effects of climate change.
59 BASIC BIOLOGICAL SCIENCES↗
Arroyo Mocho Habitat Suitability Assessment for Sensitive Reptiles, Amphibians, and Fish
Sequoia Ecological Consulting, Inc. (Sequoia) has prepared this habitat suitability assessment for the purpose of assessing current habitat suitability and evaluating the potential presence of special-status species at and near the Arroyo Mocho Pumping Station (Arroyo Mocho). The Study Area is located 7.5 miles southeast of the City of Livermore in Alameda County, California. Our analysis provides a description of presence and habitat suitability for special-status reptiles, amphibians, and fish within the Study Area and identifies potential conservation measures. Special-status animals are designated by the US Fish and Wildlife Service (USFWS) and the California Department of Fish and Wildlife (CDFW). This analysis focuses on California tiger salamander (Ambystoma californiense), California red-legged frog (Rana draytonii), foothill yellow-legged frog (Rana boylii), western pond turtle (Emys marmorata), Alameda whipsnake (Masticophis lateralis euryxanthus), Coast horned lizard (Phrynosoma blainvilli), and central California coast distinct population segment (DPS) steelhead (Oncorhynchus mykiss), per the request of Lawrence Livermore National Laboratory.
54 ENVIRONMENTAL SCIENCES↗
Status of Federally Listed Threatened and Endangered Species at Los Alamos National Laboratory
Los Alamos National Laboratory (LANL) contains suitable habitat for three species protected under the Endangered Species Act (ESA): Mexican spotted owl ( Strix occidentalis lucida ), Jemez Mountains salamander ( Plethodon neomexicanus ), and southwestern willow flycatcher ( Empidonax traillii extimus ). LANL biologists have documented two other species nearby and manage them for any potential impacts. These species are the western distinct population segment of the yellow-billed cuckoo ( Coccyzus americanus ) and the New Mexico meadow jumping mouse ( Zapus hudsonius luteus ).
54 ENVIRONMENTAL SCIENCES↗
Modulation by cyclic GMP of the odour sensitivity of vertebrate olfactory receptor cells
Recent evidence has indicated a significant role for the cGMP second messenger system in vertebrate olfactory transduction but no clear functions have been identified for cGMP so far. Here, we have examined the effects of 8-Br-cGMP and carbon monoxide (CO) on odour responses of salamander olfactory receptor neurons using perforated patch recordings. We report that 8-Br-cGMP strongly down-regulates the odour sensitivity of the cells, with a K1/2 of 460 nM. This adaptation-like effect can be mimicked by CO, an activator of soluble guanylyl cyclase, with a K1/2 of 1 microM. Sensitivity modulation is achieved through a regulatory chain of events in which cGMP stimulates a persistent background current due to the activation of cyclic nucleotide-gated channels. This in turn leads to sustained Ca2+ entry providing a negative feedback signal. One consequence of the Ca2+ entry is a shift to the right of the stimulus-response curve and a reduction in saturating odour currents. Together, these two effects can reduce the sensory generator current by up to twenty-fold. Thus, cGMP functions to control the gain of the G-protein coupled cAMP pathway. Another consequence of the action of cGMP is a marked prolongation of the odour response kinetics. The effects of CO/cGMP are long-lasting and can continue for minutes. Hence, we propose that cGMP helps to prevent saturation of the cell's response by adjusting the operational range of the cAMP cascade and contributes to olfactory adaptation by decreasing the sensitivity of olfactory receptor cells to repeated odour stimuli.
NASA Discipline Neuroscience↗