Search NASA⌕ Search

SEARCH · Search NASA

Results for “Soil incubations”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

33 records · Page 2
All sourcesNASA NTRSDOE OSTI
NASA NTRS1997

Stability of Trifluoromethane in Forest Soils and Methanotrophic Cultures

Trifluoromethane (TFM) has been reported as an endproduct of trifluoroacetate degradation under oxic conditions. Although other halomethanes, such as chloroform, methyl bromide, and methyl fluoride, inhibit methane oxidation or are degraded by methanotrophs, the fate of TFM is unknown. TFM had no affect on atmospheric methane consumption when added to forest soils at either 10 ppm or 10,000 ppm. No degradation of TFM was observed at either concentration for incubations of 6 days. Cultures of Methylobacter albus BG8 and Methylosinus trichosporium OB3b grown With and without added copper were also used to assay TFM degradation at 10 10000 ppm levels. TFM did not inhibit methane oxidation under any growth conditions, including those inducing expression of soluble methane monooxygenase, nor was it degraded at measurable rates. In contrast, parallel assays showed that both methyl fluoride and chloroform inhibited methane oxidation in M. trichosporium OB3b. Our results suggest that TFM may be relatively inert with respect to methanotrophic degradition. Although TFM has a negligible ozone depletion potential, it absorbs infrared radiation and has a relatively long atmospheric residence time. Thus, accumulation of TFM in the atmosphere as a consequence of the decomposition of hydrochlorofluorocarbons may have significant unpredicted climate impacts.

King, Gary M.↗
NASA NTRS1976

The Viking mission search for life on Mars

The scientific payload on the Viking Mars landers is described. Shortly after landing, two facsimile cameras capable of stereoscopic imaging will scan the landing site area in black and white, color, and infrared to reveal gross evidence of past or present living systems. A wide range mass spectrometer will record a complete mass spectrum for soil samples from mass 12 to mass 200 every 10.3 sec. Three experiments based on different assumptions on the nature of life on Mars, if it exists, will be carried out by the bio-lab. A pyrolytic release experiment is designed to measure photosynthetic or dark fixation of carbon dioxide or carbon monoxide into organic compounds. A labelled release experiment will test for metabolic activity during incubation of a surface sample moistened with a solution of radioactively labelled simple organic compounds. A gas exchange experiment will detect changes in the gaseous medium surrounding a soil sample as the result of metabolic activity. The hardware, function, and terrestrial test results of the bio-lab experiments are discussed.

Klein, H. P.↗
NASA NTRS1979

Laboratory simulations of the pyrolytic release experiments - An interim report

During its operation on Mars the pyrolytic release experiment (PR) detected the fixation of small amounts of CO2 and/or CO. Laboratory simulations of the experimental conditions were made in an attempt to substantiate the previous conclusion that these reactions were chemical rather than biological. After pretreatment and incubation under various conditions, pyrolytic analysis was used to indicate the extent of surface catalyzed conversion of (C-14)O2 or (C-14)O to (C-14)-organic compounds. This abiotic synthesis was detected in experiments with three iron oxides, viz. hematite, magnetite and maghemite. When the incubation atmosphere was supplemented with water vapor, the levels of synthesis were in a range comparable to that detected in the Viking PR tests. An abiotic synthesis was also detected in experiments with a mixture of clays and minerals (Mars analog soil) or with montmorillonite artificially enriched in iron. With either substratum the reaction appeared to be the result of a photocatalytic synthesis of (C-14)-organics from (C-14)O and surface hydroxyl groups. This process was not dependent on the presence of water vapor in the incubation atmosphere. Although a duplication of the Viking data has not been achieved, these findings support the abiotic interpretation of the PR results.

Hubbard, J. S.↗
NASA NTRS1972

Analysis of fungal type isolates taken from a 90-day manned test of an advanced regenerative life support system

Fungal-like cultures isolated before, during, and after the 90-day test from samples of space station simulator (SSS) atmosphere, surfaces, subsystem componets, and crew dermal sites were identified to genus. Out of the original 525 isolates, approximately 80% were classified as bacteria. Laboratory methods (culture media, moisturization, and incubation temperatures) favored the recovery of medically significant bacteria rather than fungi. Therefore, fungal isolates were mostly, nonfastidious types which are ubiquitous in soil and air and commonly contaminate laboratory cultures of pathogens. Predominant isolates were species of Aspergillus, Penicillium, Pullularia, Rhodotorula, and various yeasts. No instances of fungal proliferation were observed; test data reflect the survival of environmental types indigenous to the SSS pretests.

Sofios, M.↗
NASA NTRS2002

Dual-low frequency radar for soil moisture under vegetation at at-depth

To address a key science research topic for the global water and energy cycle, namely measuring soil moisture under substantial vegetation canopies and to useful depths, we have developed a concept for a synthetic aperture radar (SAR) system operating simultaneously at UHF and VHF frequencies. We are currently prototyping key technology items that enable this concept under the NASA Earth Science Technology Office (ESTO) Instrument Incubator Program (IIP). This presentation describes the technological challenges and innovations we are addressing to enable the implementation of this instrument and its integration into a future Earth-orbiting mission.

soil moisture low-frequency SAR deployable mech du↗
NASA NTRS2000

Metabolic activity of permafrost bacteria below the freezing point

Metabolic activity was measured in the laboratory at temperatures between 5 and -20 degrees C on the basis of incorporation of (14)C-labeled acetate into lipids by samples of a natural population of bacteria from Siberian permafrost (permanently frozen soil). Incorporation followed a sigmoidal pattern similar to growth curves. At all temperatures, the log phase was followed, within 200 to 350 days, by a stationary phase, which was monitored until the 550th day of activity. The minimum doubling times ranged from 1 day (5 degrees C) to 20 days (-10 degrees C) to ca. 160 days (-20 degrees C). The curves reached the stationary phase at different levels, depending on the incubation temperature. We suggest that the stationary phase, which is generally considered to be reached when the availability of nutrients becomes limiting, was brought on under our conditions by the formation of diffusion barriers in the thin layers of unfrozen water known to be present in permafrost soils, the thickness of which depends on temperature.

NASA Center ARC↗
NASA NTRS1998

The Arthromitus stage of Bacillus cereus: intestinal symbionts of animals

In the guts of more than 25 species of arthropods we observed filaments containing refractile inclusions previously discovered and named "Arthromitus" in 1849 by Joseph Leidy [Leidy, J. (1849) Proc. Acad. Nat. Sci. Philadelphia 4, 225-233]. We cultivated these microbes from boiled intestines of 10 different species of surface-cleaned soil insects and isopod crustaceans. Literature review and these observations lead us to conclude that Arthromitus are spore-forming, variably motile, cultivable bacilli. As long rod-shaped bacteria, they lose their flagella, attach by fibers or fuzz to the intestinal epithelium, grow filamentously, and sporulate from their distal ends. When these organisms are incubated in culture, their life history stages are accelerated by light and inhibited by anoxia. Characterization of new Arthromitus isolates from digestive tracts of common sow bugs (Porcellio scaber), roaches (Gromphodorhina portentosa, Blaberus giganteus) and termites (Cryptotermes brevis, Kalotermes flavicollis) identifies these flagellated, spore-forming symbionts as a Bacillus sp. Complete sequencing of the 16S rRNA gene from four isolates (two sow bug, one hissing roach, one death's head roach) confirms these as the low-G+C Gram-positive eubacterium Bacillus cereus. We suggest that B. cereus and its close relatives, easily isolated from soil and grown on nutrient agar, enjoy filamentous growth in moist nutrient-rich intestines of healthy arthropods and similar habitats.

Non-NASA Center↗
NASA NTRS1996

Biological degradation and composition of inedible sweetpotato biomass

Many challenges are presented by biological degradation in a bioregenerative Controlled Ecological Life Support System (CELSS) as envisioned by the U.S. National Aeronautics and Space Administration (NASA). In the studies conducted with biodegradative microorganism indigenous to sweetpotato fields, it was determined that a particle size of 75 microns and incubation temperature of 30 degrees C were optimal for degradation. The composition of the inedible biomass and characterization of plant nutrient solution indicated the presence of potential energy sources to drive microbial transformations of plant waste. Selected indigenous soil isolates with ligno-cellulolytic or sulfate-reducing ability were utilized in biological studies and demonstrated diversity in ability to reduce sulfate in solution and to utilize alternative carbon sources: a lignin analog--4-hydroxy, 3-methoxy cinnamic acid, cellulose, arabinose, glucose, sucrose, mannitol, galactose, ascorbic acid.

Vegetables/chemistry/metabolism↗
NASA NTRS1998

Analysis of proteins involved in biodegradation of crop biomass

The biodegradation of crop biomass for re-use in crop production is part of the bioregenerative life support concept proposed by the National Aeronautics and Space Administration (NASA) for long duration, manned space exploration. The current research was conducted in the laboratory to evaluate the use of electrophoretic analysis as a means of rapidly assaying for constitutive and induced proteins associated with the bacterial degradation of crop residue. The proteins involved in crop biomass biodegradation are either constitutive or induced. As a result, effluent and cultures were examined to investigate the potential of using electrophoretic techniques as a means of monitoring the biodegradation process. Protein concentration for optimum banding patterns was determined using the Bio-Rad Protein Assay kit. Four bacterial soil isolates were obtained from the G.W. Carver research Farm at Tuskegee University and used in the decomposition of components of plant biomass. The culture, WDSt3A was inoculated into 500 mL of either Tryptic Soy Broth or Nutrient Broth. Incubation, with shaking of each flask was for 96 hours at 30 C. The cultures consistently gave unique banding patterns under denaturing protein electrophoresis conditions, The associated extracellular enzymes also yielded characteristic banding patterns over a 14-day period, when native electrophoresis techniques were used to examine effluent from batch culture bioreactors. The current study evaluated sample preparation and staining protocols to determine the ease of use, reproducibility and reliability, as well as the potential for automation.

Crawford, Kamau↗
NASA NTRS1979

Smectite clays in Mars soil - Evidence for their presence and role in Viking biology experimental results

Evidence for the presence of smectite clays in Martian soils is reviewed and results of experiments with certain active clays simulating the Viking biology experiments are reported. Analyses of Martian soil composition by means of X-ray fluorescence spectrometry and dust storm spectroscopy and Martian geological history strongly suggest the presence of a mixture of weathered ferro-silicate minerals, mainly nontronite and montmorillonite, accompanied by soluble sulphate salts, as major constituents. Samples of montmorillonite and nontronite incubated with (C-14)-formate or the radioactive nutrient medium solution used in the Viking Labeled Release experiment, were found to produce patterns of release of radioactive gas very similar to those observed in the Viking experiments, indicating the iron-catalyzed decomposition of formate as the reaction responsible for the Viking results. The experimental results of Hubbard (1979) simulating the results of the Viking Pyrolytic Release experiment using iron montmorillonites are pointed out, and it is concluded that many of the results of the Viking biology experiments can be explained in terms of the surface activity of smectite clays in catalysis and adsorption.

Banin, A.↗
NASA NTRS1974

Plating isolation of various catalase-negative microorganisms from soil

A unique plating procedure was developed that allows isolation, but not enumeration, of representatives of the catalase-negative soil microflora. The numbers recovered, however, are low as compared to the numbers recovered when the modified dilution-to-extinction isolation procedure is used. The latter procedure provides prolonged inoculation in sealed tubes containing a nutritionally rich broth medium over small submerged agar slants. In contrast, the plating procedure utilizes nutritionally minimal media and the shorter incubations mandated by the inherent problems associated with plating.

Labeda, D. P.↗
NASA NTRS1974

Microbial metabolism and dynamic changes in the electrical conductivity of soil solutions - A method for detecting extraterrestrial life

Experiments are reported which show that measuring metabolic activity in soil solutions by means of dynamic changes in electrical conductivity, water-soluble Ca, or water-soluble Mg is a feasible life detection method. The addition of 0.5% glucose solutions to 12 different air-dried soils always resulted in increases in all three of these parameters. The kinetics and magnitude of these changes for at least two and usually all three of the parameters over a 14-day period were clearly distinguishable from the changes in heat-sterilized controls or unsterilized controls without added glucose. In general, maximal values were achieved more rapidly under aerobic than under anaerobic incubation.

Silverman, M. P.↗
NASA NTRS2000

Development of a Two Dimensional Synthetic Aperture Radiometer at L-Band

A radiometer that uses aperture synthesis in two dimensions is being built as part of research under NASA's Instrument Incubator Program. The instrument development team consists of engineers at the Goddard Space Flight Center, the University of Massachusetts and Quadrant Engineering. This will be an aircraft instrument operating at L-band which builds on the heritage of Electronically Steered Thinned Array Radiometer (ESTAR). This instrument is a next step in the development of aperture synthesis (STAR technology) to meet the goal of a future mission to monitor soil moisture globally from space. The instrument will be designed to fly on the NASA P-3 aircraft in a nadir pointing mode, although other options are possible. The antenna will consist of an array of modules in a rectangular grid. Each module will be comprised of a printed circuit dual-polarized patch and integrated receiver. The distribution of modules within the rectangular array will be adjustable so that several different imaging configurations (e.g. '+', 'Y', 'T') can be employed. The integrated receiver will provide amplification and conversion to infrared (IF). The IF signal will be routed to a processor where the required correlations performed. The I and Q channels will be created digitally and the correlations will be done digitally in this processor. The digitization will be done with sufficient bits to study the effects of quantization on radiometer performance. A computer/controller will store the data for conversion to an image and will also perform temperature control and other data interfacing and housekeeping tasks. The design of critical components has been completed and hardware is being assembled to test the individual elements. It is expected that a complete two-channel correlator will be tested by the end of 2000 and that the complete instrument will be ready for flight tests the following summer (2001).

LeVine, D. M.↗
NASA NTRS2000

Development of a Two Dimensional Synthetic Aperture Radiometer at L-Band

A radiometer that uses aperture synthesis in two dimensions is being built as part of research under NASA's Instrument Incubator Program. The instrument development team consists of engineers at the Goddard Space Flight Center, the University of Massachusetts and Quadrant Engineering. This will be an aircraft instrument operating at L-band which builds on the heritage of ESTAR. The choice of L-band was made because the problem of achieving adequate resolution in space is most critical at this wavelength and because a polarimetric, conical scanning airborne radiometer for future experiments to validate soil moisture and ocean salinity retrieval algorithms is not currently available. The instrument will be designed to fly on the NASA P-3 aircraft in a nadir pointing mode, although other options are possible. The antenna will consist of an array of modules arranged in a rectangular grid. Each module will be comprised of a printed circuit dual-polarized patch and integrated receiver. The distribution of modules within the rectangular array will be adjustable so that several different imaging configurations (e.g. "+","Y", "T") can be employed. The integrated receiver will provide amplification and conversion to IF. The IF signal will be routed to a processor where the required correlations performed. The I and Q channels will be created digitally and the correlations will be done digitally in this processor. The digitization will be done with sufficient bits to study the effects of quantization on radiometer performance. A computer/controller will store the data for conversion to an image and will also perform temperature control and other data interfacing and housekeeping tasks. The instrument is currently in the bread boarding phase of development. A design of the critical components has been completed and hardware is being assembled to test the individual elements. It is expected that a complete 2-channel correlator will be tested by the summer of 2000 and that the complete instrument will be ready for flight tests the following summer (2001).

LeVine, D. M.↗
NASA NTRSDate not supplied

Algorithmic Classification of Raman Spectra Biosignatures: Improving Life Detection Confidence

“Agnostic” biosignatures – indicators of life (or the absence of life), independent of a particular biochemistry – are increasingly considered a high standard for life detection. The Ladder of Life Detection (2018) called for investigating how combinations of independent and different potential biosignatures affect confidence. To address this gap, statistical classification of elemental abundances, isotopic fractionation, and reflectance spectroscopy (VNIR) has been implemented. Raman spectroscopy, highly desirable due to its wide availability, has the potential to improve this predictive power. This work implemented biosignature classification algorithms on Raman data alone, in preparation for combination with the other data types. Raman spectroscopy data was collected from published databases and papers as part of a manually curated dataset of “indicative” and “non-indicative of life” samples. These currently include 61 non-indicative samples (meteorites, magnetite); 3 indicative living samples (bacteria); 20 indicative non-living samples (chalk, bone); and 12 indicative mixed (with non-indicative material) samples (soil, microbial mats). Laboratory work is ongoing to characterize additional samples, particularly a greater breadth of mixed systems. Spectra were interpolated, filtered with the Savitzsky-Golay filter, and de-noised. For a preliminary examination, agnostic features were manually extracted including mean intensity, number of peaks, and mean peak width. Different peak prominences and filtering polynomials were used to refine features. Classification algorithms were implemented: k-nearest neighbors (KNN), logistic regression (LR), linear support vector machines (SVM), random forest (RF), Gaussian naïve bayes (GNB). Lastly, Monte Carlo simulations on 1,000 50%-train-test-splits were used to validate classification performance and feature significance. The preliminary feature set achieved its highest AUC of 0.52 with LR, with no strongly discriminatory features. Work to improve feature extraction, such as through deep learning with back propagation, is planned. In future work, the Raman data will be combined with the other data types, and potentially new data types such as enantiomeric excess. This project was partially supported through the NASA Ames Project EXcellence (APEX) incubator program.

Astrobiology↗