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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 37 records · Page 2

Anchorless forms of prion protein – Impact of truncation on structure destabilization and prion protein conversion

Prion diseases are a group of fatal neurodegenerative diseases caused by scrapie form of prion protein, PrP{sup Sc}. Prion protein (PrP) is bound to the cell via glycophosphatidylinositol (GPI) anchor. The role of GPI anchor in PrP{sup Sc} replication and propagation remains unclear. It has been shown that anchorless and truncated PrP accelerate the formation and propagation of prions in vivo and further increases the risk for transmission of prion diseases among species. To explain the role of anchorless forms of PrP in the development of prion diseases, we have prepared five C-terminal PrP truncated variants, determined their thermodynamic properties and analyzed the kinetics of conversion into amyloid fibrils. According to our results thermodynamic and kinetic properties are affected both by pH and truncation. We have shown that the shortest variant was the most destabilized and converted faster than other variants in acidic pH. Other variants converted with longer lag time of fibrillization than WT despite comparable or even decreased stability in acidic pH. Our results indicate that even the change in length for 1 amino acid residue can have a profound effect on in vitro conversion. - Highlights: • Truncation effects prion protein stability and fibrillization properties. • Protein destabilization and fibrillization properties are affected by pH and truncation. • Important intramolecular interactions between loop β{sub 2}−α{sub 2} and C-terminus of helix α{sub 3}.

60 APPLIED LIFE SCIENCES↗

Analytic reconstruction algorithms for triple-source CT with horizontal data truncation

Purpose: This paper explores a triple-source imaging method with horizontal data truncation to enlarge the field of view (FOV) for big objects. Methods: The study is conducted by using theoretical analysis, mathematical deduction, and numerical simulations. The proposed algorithms are implemented in c + + and MATLAB. While the basic platform is constructed in MATLAB, the computationally intensive segments are coded in c + +, which are linked via a MEX interface. Results: A triple-source circular scanning configuration with horizontal data truncation is developed, where three pairs of x-ray sources and detectors are unevenly distributed on the same circle to cover the whole imaging object. For this triple-source configuration, a fan-beam filtered backprojection-type algorithm is derived for truncated full-scan projections without data rebinning. The algorithm is also extended for horizontally truncated half-scan projections and cone-beam projections in a Feldkamp-type framework. Using their method, the FOV is enlarged twofold to threefold to scan bigger objects with high speed and quality. The numerical simulation results confirm the correctness and effectiveness of the developed algorithms. Conclusions: The triple-source scanning configuration with horizontal data truncation cannot only keep most of the advantages of a traditional multisource system but also cover a larger FOV for big imaging objects. In addition, because the filtering is shift-invariant, the proposed algorithms are very fast and easily parallelized on graphic processing units.

60 APPLIED LIFE SCIENCES↗

Formation of overheated regions and truncated disks around black holes: three-dimensional general relativistic radiation-magnetohydrodynamics simulations

Using three-dimensional general relativistic radiation-magnetohydrodynamics simulations of accretion flows around stellar mass black holes, we report that the relatively cold disk (≳10{sup 7} K) is truncated near the black hole. Hot and less dense regions, of which the gas temperature is ≳10{sup 9} K and more than 10 times higher than the radiation temperature (overheated regions), appear within the truncation radius. The overheated regions also appear above as well as below the disk, sandwiching the cold disk, leading to the effective Compton upscattering. The truncation radius is ∼30r{sub g} for M-dot ∼L{sub Edd}/c{sup 2}, where r{sub g}, M-dot ,L{sub Edd},c are the gravitational radius, mass accretion rate, Eddington luminosity, and light speed, respectively. Our results are consistent with observations of a very high state, whereby the truncated disk is thought to be embedded in the hot rarefied regions. The truncation radius shifts inward to ∼10r{sub g} with increasing mass accretion rate M-dot ∼100L{sub Edd}/c{sup 2}, which is very close to an innermost stable circular orbit. This model corresponds to the slim disk state observed in ultraluminous X-ray sources. Although the overheated regions shrink if the Compton cooling effectively reduces the gas temperature, the sandwich structure does not disappear at the range of M-dot ≲100L{sub Edd}/c{sup 2}. Our simulations also reveal that the gas temperature in the overheated regions depends on black hole spin, which would be due to efficient energy transport from black hole to disks through the Poynting flux, resulting in gas heating.

79 ASTRONOMY AND ASTROPHYSICS↗

Panchromatic Hubble Andromeda Treasury. XVIII. The High-mass Truncation of the Star Cluster Mass Function

We measure the mass function for a sample of 840 young star clusters with ages between 10 and 300 Myr observed by the Panchromatic Hubble Andromeda Treasury (PHAT) survey in M31. The data show clear evidence of a high-mass truncation: only 15 clusters more massive than 10{sup 4} M{sub ⊙} are observed, compared to the ∼100 expected for a canonical M{sup −2} pure power-law mass function with the same total number of clusters above the catalog completeness limit. Adopting a Schechter function parameterization, we fit a characteristic truncation mass of M{sub c}=8.5{sub −1.8}{sup +2.8}×10{sup 3} M {sub ☉}. Although previous studies have measured cluster mass function truncations, the characteristic truncation mass we measure is the lowest ever reported. Combining this M31 measurement with previous results, we find that the cluster mass function truncation correlates strongly with the characteristic star formation rate surface density of the host galaxy, where M{sub c}∝〈Σ{sub SFR}〉{sup ∼1.1}. We also find evidence that suggests the observed M {sub c}–Σ{sub SFR} relation also applies to globular clusters, linking the two populations via a common formation pathway. If so, globular cluster mass functions could be useful tools for constraining the star formation properties of their progenitor host galaxies in the early universe.

79 ASTRONOMY AND ASTROPHYSICS↗

Non-perturbative methodologies for low-dimensional strongly-correlated systems: From non-Abelian bosonization to truncated spectrum methods

We review two important non-perturbative approaches for extracting the physics of low-dimensional strongly correlated quantum systems. Firstly, we start by providing a comprehensive review of non-Abelian bosonization. This includes an introduction to the basic elements of conformal field theory as applied to systems with a current algebra, and we orient the reader by presenting a number of applications of non-Abelian bosonization to models with large symmetries. We then tie this technique into recent advances in the ability of cold atomic systems to realize complex symme-tries. Secondly, we discuss truncated spectrum methods for the numerical study of systems in one and two dimensions. For one-dimensional systems we provide the reader with considerable insight into the methodology by reviewing canonical applications of the technique to the Ising model (and its variants) and the sine-Gordon model. Following this we review recent work on the development of renormalization groups, both numerical and analytical, that alleviate the effects of truncating the spectrum. Using these technologies, we consider a number of applications to one-dimensional systems: properties of carbon nanotubes, quenches in the Lieb-Liniger model, 1+1D quantum chro-modynamics, as well as Landau-Ginzburg theories. In the final part we move our attention to consider truncated spectrum methods applied to two-dimensional systems. This involves combining truncated spectrum methods with matrix product state algorithms. Lastly, we describe applications of this method to two-dimensional systems of free fermions and the quantum Ising model, including their non-equilibrium dynamics.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Zero-truncated Poisson regression for sparse multiway count data corrupted by false zeros

Abstract We propose a novel statistical inference methodology for multiway count data that is corrupted by false zeros that are indistinguishable from true zero counts. Our approach consists of zero-truncating the Poisson distribution to neglect all zero values. This simple truncated approach dispenses with the need to distinguish between true and false zero counts and reduces the amount of data to be processed. Inference is accomplished via tensor completion that imposes low-rank tensor structure on the Poisson parameter space. Our main result shows that an $N$-way rank-$R$ parametric tensor $\boldsymbol{\mathscr{M}}\in (0,\infty )^{I\times \cdots \times I}$ generating Poisson observations can be accurately estimated by zero-truncated Poisson regression from approximately $IR^2\log _2^2(I)$ non-zero counts under the nonnegative canonical polyadic decomposition. Our result also quantifies the error made by zero-truncating the Poisson distribution when the parameter is uniformly bounded from below. Therefore, under a low-rank multiparameter model, we propose an implementable approach guaranteed to achieve accurate regression in under-determined scenarios with substantial corruption by false zeros. Several numerical experiments are presented to explore the theoretical results.

97 MATHEMATICS AND COMPUTING↗

Female “Paradox” in Atrial Fibrillation—Role of Left Truncation Due to Competing Risks

Female sex in patients with atrial fibrillation (AF) is a controversial and paradoxical risk factor for stroke—controversial because it increases the risk of stroke only among older women of some ethnicities and paradoxical because it appears to contradict male predominance in cardiovascular diseases. However, the underlying mechanism remains unclear. We conducted simulations to examine the hypothesis that this sex difference is generated non-causally through left truncation due to competing risks (CR) such as coronary artery diseases, which occur more frequently among men than among women and share common unobserved causes with stroke. We modeled the hazards of stroke and CR with correlated heterogeneous risk. We assumed that some people died of CR before AF diagnosis and calculated the hazard ratio of female sex in the left-truncated AF population. In this situation, female sex became a risk factor for stroke in the absence of causal roles. The hazard ratio was attenuated in young populations without left truncation and in populations with low CR and high stroke incidence, which is consistent with real-world observations. This study demonstrated that spurious risk factors can be identified through left truncation due to correlated CR. Female sex in patients with AF may be a paradoxical risk factor for stroke.

59 BASIC BIOLOGICAL SCIENCES↗

Conformal truncation of chern-simons theory at large $N$ f

We set up and analyze the lightcone Hamiltonian for an abelian Chern-Simons field coupled to N f fermions in the limit of large Nf using conformal truncation, i.e. with a truncated space of states corresponding to primary operators with dimension below a maximum cutoff Δ max . In both the Chern-Simons theory, and in the O(N) model at infinite N, we compute the current spectral functions analytically as a function of Δ max and reproduce previous results in the limit that the truncation Δ max is taken to ∞. Along the way, we determine how to preserve gauge invariance and how to choose an optimal discrete basis for the momenta of states in the truncation space.

1/N expansion, Chern-Simons Theories↗

Consistent truncations and dualities

Recent progress in generalised geometry and extended field theories suggests a deep connection between consistent truncations and dualities, which is not immediately obvious. A prime example is generalised Scherk-Schwarz reductions in double field theory, which have been shown to be in one-to-one correspondence with Poisson-Lie T-duality. Here we demonstrate that this relation is only the tip of the iceberg. Currently, the most general known classes of T-dualities (excluding mirror symmetry) are based on dressing cosets. But as we discuss, they can be further extended to the even larger class of generalised cosets. We prove that the latter give rise to consistent truncations for which the ansatz can be constructed systematically. Hence, we pave the way for many new examples of T-dualities and consistent truncations. The arising structures result in covariant tensors with more than two derivatives and we argue how they might be key to understand generalised T-dualities and consistent truncations beyond the leading two derivative level.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Krylov spaces for truncated spectrum methodologies

We propose herein an extension of truncated spectrum methodologies, a nonperturbative numerical approach able to elucidate the low energy properties of quantum field theories. TSMs, in their various flavors, involve a division of a computational Hilbert space, H , into two parts, one part, H 1 that is “kept” for the numerical computations, and one part, H 2 , that is discarded or “truncated.” Even though H 2 is discarded, truncated spectrum methodologies will often try to incorporate the effects of H 2 in some effective way. In these terms, we propose to keep the dimension of H 1 small. We pair this choice of H 1 with a Krylov subspace iterative approach able to take into account the effects of H 2 . This iterative approach can be taken to arbitrarily high order and so offers the ability to compute quantities to arbitrary precision. In many cases it also offers the advantage of not needing an explicit UV cutoff. To compute the matrix elements that arise in the Krylov iterations, we employ a Feynman diagrammatic representation that is then evaluated with Monte Carlo techniques. Each order of the Krylov iteration is variational and is guaranteed to improve upon the previous iteration. The first Krylov iteration is akin to the next-to-leading order approach of Elias-Miró [NLO renormalization in the Hamiltonian truncation, ]. To demonstrate this approach, we focus on the ( 1 + 1 d )-dimensional ϕ 4 model and compute the bulk energy and mass gaps in both the Z 2 -broken and unbroken sectors. We estimate the critical ϕ 4 coupling in the broken phase to be g c = 0.2645 ± 0.002 . Published by the American Physical Society 2024

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Invariance of Topological Indices Under Hilbert Space Truncation

Here, we show that the topological index of a wave function, computed in the space of twisted boundary phases, is preserved under Hilbert space truncation, provided the truncated state remains normalizable. If truncation affects the boundary condition of the resulting state, the invariant index may acquire a different physical interpretation. If the index is symmetry protected, the truncation should preserve the protecting symmetry. We discuss implications of this invariance using paradigmatic integer and fractional Chern insulators, Z 2 topological insulators, and spin-1 Affleck-Kennedy-Lieb-Tasaki and Heisenberg chains, as well as its relation with the notion of bulk entanglement. As a possible application, we propose a partial quantum tomography scheme from which the topological index of a generic multicomponent wave function can be extracted by measuring only a small subset of wave function components, equivalent to the measurement of a bulk entanglement topological index.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Radioactive Decay Chain Truncation Rules for Emergency Response Radiological Assessments

A set of radionuclide - decay chain truncation rules have been developed for use in the Turbo FRMAC and Specialized Hazard Assessment Response Capability (SHARC) software programs used to support radiological emergency response activities . Following the proposed rules, the software will truncate a decay chain after it encounters a progeny radionuclide with a half - life greater than 5,000 years. An analysis of the projected dose from many parent and progeny radionuclides over a 50 - year time period yielded that a radionuclide half - life cutoff of 5,000 years will exclude a negligible dose. Implementing the truncation rules will reduce the time required for assessments and minimize computer hardware requ irements without having a significant detrimental effect on dose projections and emergency response decisions. It is noted that the truncation rules may not be suited for long - term ( greater than 50 year) environmental assessments.

07 ISOTOPE AND RADIATION SOURCES↗

Appendage modal coordinate truncation criteria in hybrid coordinate dynamic analysis

The paper examines the validity of the assumption that certain appendage-distributed (modal) coordinates can be truncated from a system model without unacceptable degradation of fidelity in hybrid coordinate dynamic analysis for attitude control of spacecraft with flexible appendages. Alternative truncation criteria are proposed and their interrelationships defined. Particular attention is given to truncation criteria based on eigenvalues, eigenvectors, and controllability and observability. No definitive resolution of the problem is advanced, and exhaustive study is required to obtain ultimate truncation criteria.

Likins, P.↗

Effects of truncation in modal representations of thermal convection

The Galerkin equations for convection in a sphere are examined to determine which physical processes are neglected by the severe truncation of the equations of motion. It is demonstrated that the gross features of the flow are affected by truncation in the horizontal direction, with all of the models considered being well resolved in the vertical direction. One of the effects of truncation is to enhance the high-wave number end of the kinetic energy and thermal variance spectra. The examples cited indicate that as long as the kinetic energy spectrum decreases with wave number, a truncation gives a qualitatively correct solution. Conclusions are tested by calculating solutions to the equations of motion for several values of the Rayleigh number and the limit of horizontal spatial resolution.

Marcus, P. S.↗

Reducing Truncation Error In Integer Processing

Improved method of rounding off (truncation of least-significant bits) in integer processing of data devised. Provides for reduction, to extremely low value, of numerical bias otherwise generated by accumulation of truncation errors from many arithmetic operations. Devised for use in integer signal processing, in which rescaling and truncation usually performed to reduce number of bits, which typically builds up in sequence of operations. Essence of method to alternate direction of roundoff (plus, then minus) on alternate occurrences of truncated values contributing to bias.

Thomas, J. Brooks↗

Truncation Depth Rule-of-Thumb for Convolutional Codes

In this innovation, it is shown that a commonly used rule of thumb (that the truncation depth of a convolutional code should be five times the memory length, m, of the code) is accurate only for rate 1/2 codes. In fact, the truncation depth should be 2.5 m/(1 - r), where r is the code rate. The accuracy of this new rule is demonstrated by tabulating the distance properties of a large set of known codes. This new rule was derived by bounding the losses due to truncation as a function of the code rate. With regard to particular codes, a good indicator of the required truncation depth is the path length at which all paths that diverge from a particular path have accumulated the minimum distance of the code. It is shown that the new rule of thumb provides an accurate prediction of this depth for codes of varying rates.

Moision, Bruce↗

Measuring a Truncated Disk in Aquila X-1

We present NuSTAR and Swift observations of the neutron star Aquila X-1 during the peak of its 2014 July outburst. The spectrum is soft with strong evidence for a broad Fe K(alpha) line. Modeled with a relativistically broadened reflection model, we find that the inner disk is truncated with an inner radius of 15 +/- 3RG. The disk is likely truncated by either the boundary layer and/or a magnetic field. Associating the truncated inner disk with pressure from a magnetic field gives an upper limit of B < 5+/- 2x10(exp 8) G. Although the radius is truncated far from the stellar surface, material is still reaching the neutron star surface as evidenced by the X-ray burst present in the NuSTAR observation.

accretion disks aEuro" magnetic fields aEuro" star↗

Modified Geometric Truncation of the Scattering Phase Function

Phase function of light scattering on large atmospheric particles has very strong peak in forward direction constituting a challenge for accurate numerical calculations of radiance required in remote sensing problems. Scaling transformation replaces original phase function with a sum of the delta function and a new regular smooth phase function. Geometric truncation is one of the ways to construct such a smooth function. The replacement phase function coincides with the original one outside the forward cone and preserves the asymmetry parameter. It has discontinuity at the cone. Another simple functional form of the replacement phase function within the cone is suggested. It enables continuity and allows for a number of modifications. Three of them are considered in this study: preserving asymmetry parameter, providing continuity of the 1st derivative of the phase function, and preserving mean scattering angle. Yet another problem addressed in this study is objective selection of the width of the forward cone. That angle affects truncation fraction and values of the phase function within the cone. A heuristic approach providing unambiguous criterion of selection of the truncation angle is proposed. The approach has easy numerical implementation. Suggested modifications were tested on cloud phase function using discrete ordinates and Monte Carlo methods. It was shown that the modifications provide better accuracy of the radiance computation compare to the original geometric truncation with discrete ordinates while continuous derivative approach provides significant gain in computer time with Monte Carlo simulations.

Alexander Radkevich↗