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NASA NTRS2001

Remote Sensing of Cloud, Aerosol, and Water Vapor Properties from MODIS

MODIS is an earth-viewing cross-track scanning spectroradiometer launched on the Terra satellite in December 1999. MODIS scans a swath width sufficient to provide nearly complete global coverage every two days from a polar-orbiting, sun-synchronous, platform at an altitude of 705 km, and provides images in 36 spectral bands from 0.415 to 14.235 microns with spatial resolutions of 250 m (2 bands), 500 m (5 bands) and 1000 m (29 bands). These bands have been carefully selected to enable advanced studies of land, ocean, and atmospheric processes. In this presentation I will review the comprehensive set of remote sensing algorithms that have been developed for the remote sensing of atmospheric properties using MODIS data, placing primary emphasis on the principal atmospheric applications of: (1) developing a cloud mask for distinguishing clear sky from clouds, (2) retrieving global cloud radiative and microphysical properties, including cloud top pressure and temperature, effective emissivity, cloud optical thickness, thermodynamic phase, and effective radius, (3) monitoring tropospheric aerosol optical thickness over the land and ocean and aerosol size distribution over the ocean, (4) determining atmospheric profiles of moisture and temperature, and (5) estimating column water amount. The physical principles behind the determination of each of these atmospheric products will be described, together with an example of their application using MODIS observations. All products are archived into two categories: pixel-level retrievals (referred to as Level-2 products) and global gridded products at a latitude and longitude resolution of 1 deg (Level-3 products). An overview of the MODIS atmosphere algorithms and products, status, validation activities, and early level-2 and -3 results will be presented. Finally, I will present some highlights from the land and ocean algorithms developed for processing global MODIS observations, including: (1) surface reflectance, (2) vegetation indices, leaf area index, and FPAR, (3) albedo and nadir BRDF-adjusted reflectance, (4) normalized water-leaving radiance, (5) chlorophyll-a concentration, and (6) sea surface temperature.

King, Michael D.↗
NASA NTRS2000

The Northeast Monsoon's Impact on Mixing, Phytoplankton Biomass and Nutrient Cycling in the Arabian Sea

In the northern Arabian Sea, atmospheric conditions during the Northeast (winter) Monsoon lead to deep convective mixing. Due to the proximity of the permanent pyncnocline to the sea surface, this mixing does not penetrate below 125 m. However, a strong nitracline is also present and the deep convection results in significant nitrate flux into the surface waters. This leads to nitrate concentrations over the upper 100 m that exceed 4 micrometers toward the end of the Monsoon. During the 1994/1995 US JGOFS/Arabian Sea expedition, the mean areal gross primary production over two successive Northeast Monsoons was determined to be 1.35gC/sq m/d. Thus, despite the deep penetrative convection, high rates of primary productivity were maintained. An interdisciplinary model was developed to elucidate the biogeochemical processes involved in supporting the elevated productivity. This model consists of a 1-D mixed-layer model coupled to a set of equations that tracked phytoplankton growth and the concentration of the two major nutrients (nitrate and ammonium). Zooplankton grazing was parameterized by rate constant determined by shipboard experiments. Model boundary conditions consist of meteorological time-series measured from the surface buoy that was part of the ONR Arabian Sea Experiment's central mooring. Our numerical experiments show that elevated surface evaporation, and the associated salinization of the mixed layer, strongly contributes to the frequency and penetration depth of the observed convective mixing. Cooler surface temperatures, increased nitrate entrainment, reduced water column stratification, and lower near-surface chlorophyll a concentrations all result from this enhanced mixing. The model also captured a dependence on regenerated nitrogen observed in nutrient uptake experiments performed during the Northeast Monsoon. Our numerical experiments also indicate that variability in mean pycnocline depth causes up to a 25% reduction in areal chlorophyll a concentration. We hypothesize that such shifts in pycnocline depth may contribute to the interannual variations in primary production and surface chlorophyll a concentration that have been previously observed in this region.

Wiggert, J. D.↗
NASA NTRS1986

Effects of nitrogen fertilization on growth and reflectance characteristics of winter wheat

The use of remote sensing to determine seasonal changes in agronomic and spectral properties of winter wheat canopies with different levels of N fertilization is investigated. Field experiments were conducted at Purdue Agronomy Farm, West Lafayette, IN during the 1978-1979 and 1979-1980 growing season. Spectral reflectance, total leaf N concentration, leaf chlorophyll concentration, leaf are index (LAI), and fresh and dry phytomass are measured and analyzed. Three distinct wheat canopies are detected for the O, 60, and 120 kg N/ha levels of fertilization; it is observed that with an increase in N the reflectance in the visible, and middle IR wavelengths decrease, and the IR reflectance is increased. The canopies with 120 kg N/ha display the highest LAI, maintain green leaf area the longest, and increase in fresh and dry phytomass. The relationship between spectral and agronomic variables is examined; the effect of changing chlorophyll concentration and LAI on the reflectance is studied.

Hinzman, L. D.↗
NASA NTRS2024

Spectral Correlation in MODIS Water-Leaving Reflectance Retrieval Uncertainty

Spectral remote sensing reflectance, Rrs(λ) (sr−1), is the fundamental quantity used to derive a host of bio-optical and biogeochemical properties of the water column from satellite ocean color measurements. Estimation of uncertainty in those derived geophysical products is therefore dependent on knowledge of the uncertainty in satellite-retrieved R rs . Furthermore, since the associated algorithms require R rs at multiple spectral bands, the spectral (i.e., band-to-band)error covariance in R rs is needed to accurately estimate the uncertainty in those derived properties. This study establishes a derivative-based approach for propagating instrument random noise, instrument systematic uncertainty, and forward model uncertainty into R rs as retrieved using NASA’s multiple-scattering epsilon (MSEPS) atmospheric correction algorithm, to generate pixel-level error covariance in R rs . The approach is applied to measurements from Moderate Resolution Imaging Spectroradiometer (MODIS) on the Aqua satellite and verified using Monte Carlo (MC) analysis. We also make use of this full spectral error covariance in R rs to calculate uncertainty in phytoplankton pigment chlorophyll-a concentration (chl a , mg/m 3 ) and diffuse attenuation coefficient of downwelling irradiance at 490 nm (K d (490), m -1 ). Accounting for the error covariance in R rs generally reduces the estimated relative uncertainty in chl a by ∼1-2% (absolute value) in waters with chl a < 0.25 mg/m 3 where the color index (CI) algorithm is used. The reduction is ∼5-10% in waters with chl a > 0.35 mg/m 3 where the blue-green ratio (OCX) algorithm is used. Such reduction can be higher than 30% in some regions. For K d (490), the reduction by error covariance is generally ∼2%, but can be higher than 20% in some regions. The error covariance in R rs is further verified through forward-calculating chl a from MODIS-retrieved and in situ R rs and comparing estimated uncertainty with observed differences. An 8-day global composite of propagated uncertainty shows that the goal of 35% uncertainty in chl a can be achieved over deep ocean waters (chl a ≤ 0.1 mg/m3). While the derivative-based approach generates reasonable error covariance in R rs some assumptions should be updated as our knowledge improves. These include the inter-band error correlation in top-of-atmosphere reflectance, and uncertainties in the calibration of MODIS 869 nm band, in ancillary data, and in the in situ data used for system vicarious calibration.

Ocean color↗
NASA NTRS2024

Contributions of David Mauzerall to Photosynthesis Research - Celebrating His 95th Birthday

We honor here Professor David Mauzerall, a pioneer in the fields of photochemistry and photobiology of porphyrins and chlorophylls in vitro and in vivo, on the occasion of his 95th birthday. Throughout his career at The Rockefeller University, he refined our understanding of how chlorophyll converts light energy into chemical energy. He exploited top-of-the-line laser technology in developing photoacoustics and a variety of other innovative experimental approaches. His experimental work and conceptual insights contributed greatly to our understanding of photosynthesis and the possible role of photosynthesis in the origin of life. His contributions include many landmark single-authored and collaborative papers, and his legacy includes the training of others who have become authorities themselves. After providing a brief description of his research accomplishments, we include tributes from several of his coworkers and his daughters highlighting their valuable experiences with David Mauzerall on this milestone birthday.

chlorophyll↗
NASA NTRS2000

The Correlation Between Atmospheric Dust Deposition to the Surface Ocean and SeaWiFS Ocean Color: A Global Satellite-Based Analysis

Since the atmospheric deposition of iron has been linked to primary productivity in various oceanic regions, we have conducted an objective study of the correlation of dust deposition and satellite remotely sensed surface ocean chlorophyll concentrations. We present a global analysis of the correlation between atmospheric dust deposition derived from a satellite-based 3-D atmospheric transport model and SeaWiFs estimates of ocean color. We use the monthly mean dust deposition fields of Ginoux et al. which are based on a global model of dust generation and transport. This model is driven by atmospheric circulation from the Data Assimilation Office (DAO) for the period 1995-1998. This global dust model is constrained by several satellite estimates of standard circulation characteristics. We then perform an analysis of the correlation between the dust deposition and the 1998 SeaWIFS ocean color data for each 2.0 deg x 2.5 deg lat/long grid point, for each month of the year. The results are surprisingly robust. The region between 40 S and 60 S has correlation coefficients from 0.6 to 0.95, statistically significant at the 0.05 level. There are swaths of high correlation at the edges of some major ocean current systems. We interpret these correlations as reflecting areas that have shear related turbulence bringing nitrogen and phosphorus from depth into the surface ocean, and the atmospheric supply of iron provides the limiting nutrient and the correlation between iron deposition and surface ocean chlorophyll is high. There is a region in the western North Pacific with high correlation, reflecting the input of Asian dust to that region. The southern hemisphere has an average correlation coefficient of 0.72 compared that in the northern hemisphere of 0.42 consistent with present conceptual models of where atmospheric iron deposition may play a role in surface ocean biogeochemical cycles. The spatial structure of the correlation fields will be discussed within the context of guiding the design of field programs.

Erickson, D. J., III↗
NASA NTRS1976

The use of ERTS-1 to more fully utilize and apply marine station data to the study and productivity along the eastern shelf waters of the United States

The author has identified the following significant results. Sea truth data were obtained during two ERTS overpasses in waters near the entrance of the Chesapeake Bay. Correlations were made between total phytoplankton and chlorophyll values in these waters to radiance detected by ERTS in an effort to map areas of similar productivity levels. Band 4 radiance had the highest correlation to all parameters with bands 5 and 6 showing decreasing correlations in each case. The radiance values were apparently influenced by one or more factors, most likely including the sediment content of the water. Data have shown that ERTS MSS is not suitable for monitoring chlorophyll in near-shore waters where sediment loads are high. It is suggested that in more seaward or pelagic locations, that ERTS MSS would be more efficient in monitoring surface chlorophyll values and establishing direct relationships to phytoplankton concentrations.

Marshall, H. G.↗
NASA NTRS2012

Diagnostic modeling of dimethylsulfide production in coastal water west of the Antarctic Peninsula

The rate of gross biological dimethylsulfide (DMS) production at two coastal sites west of the Antarctic Peninsula, off Anvers Island, near Palmer Station, was estimated using a diagnostic approach that combined field measurements from 1 January 2006 through 1 March 2006 and a one-dimensional physical model of ocean mixing. The average DMS production rate in the upper water column (0-60 m) was estimated to be 3.1 +/- 0.6 nM/d at station B (closer to shore) and 2.7 +/- 0.6 nM/d1 at station E (further from shore). The estimated DMS replacement time was on the order of 1 d at both stations. DMS production was greater in the mixed layer than it was below the mixed layer. The average DMS production normalized to chlorophyll was 0.5 +/- nM/d)/(mg cubic m) at station B and 0.7 +/- 0.2 (nM/d)/(mg/cubic m3) at station E. When the diagnosed production rates were normalized to the observed concentrations of total dimethylsulfoniopropionate (DMSPt, the biogenic precursor of DMS), we found a remarkable similarity between our estimates at stations B and E (0.06 +/- 0.02 and 0.04 +/- 0.01 (nM DMS / d1)/(nM DMSP), respectively) and the results obtained in a previous study from a contrasting biogeochemical environment in the North Atlantic subtropical gyre (0.047 =/- 0.006 and 0.087 +/- 0.014 (nM DMS d1)/(nM DMSP) in a cyclonic and anticyclonic eddy, respectively).We propose that gross biological DMS production normalized to DMSPt might be relatively independent of the biogeochemical environment, and place our average estimate at 0.06 +/- 0.01 (nM DMS / d)/(nM DMSPt). The significance of this finding is that it can provide a means to use DMSPt measurements to extrapolate gross biological DMS production, which is extremely difficult to measure experimentally under realistic in situ conditions.

Dimethylsulfide↗
NASA NTRS1986

A simulation analysis of the fate of phytoplankton within the mid-Atlantic bight

A time-dependent, three-dimensional simulation model of wind-induced changes of the circulation field, of light and nutrient regulation of photosynthesis, of vertical mixing as well as algal sinking, and of herbivore grazing stress, is used to analyze the seasonal production, consumption, and transport of the spring bloom within the mid-Atlantic Bight. The particular case (c) of a 58-day period in February-April 1979, simulated primary production, based on both nitrate and recycled nitrogen, with a mean of 0.62 g C sq m/day over the whole model domain, and an export at the shelf-break off Long Island of 2.60 g ch1 sq m/day within the lower third of the water column. About 57% of the carbon fixation was removed by herbivores, with 21% lost as export, either downshelf or offshore to slope waters, after the first 58 days of the spring bloom. Extension of the model for another 22 days of case (c) increased the mean export to 27%, while variation of the model's parameters in 8 other cases led to a range in export from 8% to 38% of the average primary production. Spatial and temporal variations of the simulated albal biomass, left behind in the shelf water column, reproduced chlorophyll fields sensed by satellite, shipboard, and in situ instruments.

Walsh, J. J.↗
NASA NTRS2010

The Fourth SeaWiFS HPLC Analysis Round-Robin Experiment (SeaHARRE-4)

Ten international laboratories specializing in the determination of marine pigment concentrations using high performance liquid chromatography (HPLC) were intercompared using in situ samples and a mixed pigment sample. Although prior Sea-viewing Wide Field-of-view Sensor (SeaWiFS) High Performance Liquid Chromatography (HPLC) Round-Robin Experiment (SeaHARRE) activities conducted in open-ocean waters covered a wide dynamic range in productivity, and some of the samples were collected in the coastal zone, none of the activities involved exclusively coastal samples. Consequently, SeaHARRE-4 was organized and executed as a strictly coastal activity and the field samples were collected from primarily eutrophic waters within the coastal zone of Denmark. The more restrictive perspective limited the dynamic range in chlorophyll concentration to approximately one and a half orders of magnitude (previous activities covered more than two orders of magnitude). The method intercomparisons were used for the following objectives: a) estimate the uncertainties in quantitating individual pigments and higher-order variables formed from sums and ratios; b) confirm if the chlorophyll a accuracy requirements for ocean color validation activities (approximately 25%, although 15% would allow for algorithm refinement) can be met in coastal waters; c) establish the reduction in uncertainties as a result of applying QA procedures; d) show the importance of establishing a properly defined referencing system in the computation of uncertainties; e) quantify the analytical benefits of performance metrics, and f) demonstrate the utility of a laboratory mix in understanding method performance. In addition, the remote sensing requirements for the in situ determination of total chlorophyll a were investigated to determine whether or not the average uncertainty for this measurement is being satisfied.

Hooker, Stanford B.↗
NASA NTRS2009

The Third SeaWiFS HPLC Analysis Round-Robin Experiment (SeaHARRE-3)

Seven international laboratories specializing in the determination of marine pigment concentrations using high performance liquid chromatography (HPLC) were intercompared using in situ samples and a mixed pigment sample. The field samples were collected primarily from oligotrophic waters, although mesotrophic and eutrophic waters were also sampled to create a dynamic range in chlorophyll concentration spanning approximately two orders of magnitude (0.020 1.366 mg m^{-3}) The intercomparisons were used to establish the following: a) the uncertainties in quantitating individual pigments and higher-order variables (sums, ratios, and indices); b) the reduction in uncertainties as a result of applying quality assurance (QA) procedures; c) the importance of establishing a properly defined referencing system in the computation of uncertainties; d) the analytical benefits of performance metrics, and e) the utility of a laboratory mix in understanding method performance. In addition, the remote sensing requirements for the in situ determination of total chlorophyll a were investigated to determine whether or not the average uncertainty for this measurement is being satisfied.

Hooker, Stanford B.↗
NASA NTRS1978

A comparison between the first four thematic mapper reflective bands and other satellite sensor systems for vegetational monitoring

The first four Landsat-D thematic mapper sensors were evaluated and compared to the RBV and MSS sensors from Landsats-1, 2, and 3, Colvocoresses' proposed 'operational Landsat' three band system, and the French SPOT three band system using simulation/integration techniques and in situ collected spectral reflectance data. Sensors were evaluated by their ability to discriminate vegetation biomass, chlorophyll concentration, and leaf water content. The thematic mapper and SPOT bands were superior in a spectral resolution context to the other three sensor systems for vegetational applications. Significant improvements are expected for vegetational analyses from Landsat-D thematic mapper and SPOT imagery over MSS and RBV imagery.

Tucker, C. J.↗
NASA NTRS1979

Chlorophyll gradient map from high-altitude ocean-color-scanner data

A chlorophyll density map of an ocean area 25 x 30 km is presented, and the procedure used in generating the map from high-altitude ocean-color-scanner data is discussed. Data were obtained from a ten-channel radiometer on board a U-2 aircraft flying at 19.8 km above the coastal waters of Monterey Bay, California under conditions of clear skies and clear and deep water; the processing algorithms should be useful for satellite data as well. The total radiance measured at high altitude was separated into an atmospheric and sea-surface component and a water component, which is associated with chlorophyll content, for each pixel using the upwelling radiance of a near IR channel to estimate the atmospheric effect. Chlorophyll data were extracted by taking the ratio of the difference of intensities in the 472 and 506 nm channels to the sum of the channels, and are found to agree with shipboard chlorophyll determinations at a depth of 5 m.

Kim, H. H.↗
NASA NTRS1992

Green and non-green callus induction from excised rice (Oryza sativa) embryos: effects of exogenous plant growth regulators

Calli were induced either from excised rice embryos or from whole seeds in the presence of 1 to 5 mg l-1 NAA. After 12 days of culture, calli were induced only from excised rice embryos. We found that excised embryos accumulated NAA up to 6 times higher concentration than did whole seeds. In the presence of 1 to 5 mg l-1 NAA and 2 to 10 mg l-1 kinetin, chlorophyllous calli were induced from excised rice embryos. Chlorophyll contents in the callus tissue increased with increasing kinetin concentration while percent callus induction decreased. The total chlorophyll content was linearly correlated with the ratio of kinetin to NAA in the medium.

NASA Discipline Number 40-50↗