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At least 37 records · Page 2

Computer-aided classification of suspicious pigmented lesions using wide-field images

Early identification of melanoma is conducted through whole-body visual examinations to detect suspicious pigmented lesions, a situation that fluctuates in accuracy depending on the experience and time of the examiner. Computer-aided diagnosis tools for skin lesions are typically trained using pre-selected single-lesion images, taken under controlled conditions, which limits their use in wide-field scenes. Here, we propose a computer-aided classifier system with such input conditions to aid in the rapid identification of suspicious pigmented lesions at the primary care level. 133 patients with a multitude of skin lesions were recruited for this study. All lesions were examined by a board-certified dermatologist and classified into “suspicious” and “non-suspicious”. A new clinical database was acquired and created by taking Wide-Field images of all major body parts with a consumer-grade camera under natural illumination condition and with a consistent source of image variability. 3–8 images were acquired per patient on different sites of the body, and a total of 1759 pigmented lesions were extracted. A machine learning classifier was optimized and build into a computer aided classification system to binary classify each lesion using a suspiciousness score. In a testing set, our computer-aided classification system achieved a sensitivity of 100% for suspicious pigmented lesions that were later confirmed by dermoscopy examination (“SPL_A”) and 83.2% for suspicious pigmented lesions that were not confirmed after examination (“SPL_B”). Sensitivity for non-suspicious lesions was 72.1%, and accuracy was 75.9%. With these results we defined a suspiciousness score that is aligned with common macro-screening (naked eye) practices. This work demonstrates that wide-field photography combined with computer-aided classification systems can distinguish suspicious from non-suspicious pigmented lesions, and might be effective to assess the severity of a suspicious pigmented lesions. We believe this approach could be useful to support skin screenings at a population-level.

60 APPLIED LIFE SCIENCES↗

An operational application of satellite snow cover observations, northwest United States

LANDSAT-1 imagery showing extent of snow cover was collected and is examined for the 1973 and 1974 snowmelt seasons for three Columbia River Basins. Snowlines were mapped and the aerial snow cover was determined using satellite data. Satellite snow mapping products were compared products from conventional information sources (computer programming and aerial photography was used). Available satellite data were successfully analyzed by radiance thresholding to determine snowlines and the attendant snow-covered area. Basin outline masks, contour elevation masks, and grid overlays were utilized as satellite data interpretation aids. Verification of the LANDSAT-1 data was generally good although there were exceptions. A major problem was lack of adequate cloud-free satellite imagery of high resolution and determining snowlines in forested areas.

Dillard, J. P.↗

The NASA Open Science Data Repository: Biomedical Fair Data, Analysis Tools, User Communities, Publications, and Discoveries for Deep Space Missions

Increased biomedical risks and challenges associated with deep space missions require new knowledge discovery, new health countermeasures, and development of novel ecosystems, life support, crop production, and biomedical support capabilities. To meet NASA’s Moon to Mars strategic program goals for Human and Biological Sciences, findable, accessible, interoperable, reusable (FAIR), and maximally open-access data is going to be required to enable humanity to thrive in deep space. Indeed, this cornerstone perspective on FAIR and maximally open access data was also recommended in the recent 2023-2032 Decadal Survey from the National Academies of Sciences, Engineering, and Medicine. The NASA Open Science Data Repository (OSDR) is a maximally open access and FAIR database, and meets various scientific, technical, and operational spaceflight needs. It offers public users and submitters the ability to upload, download, search, share, analyze, and visualize data across ‘omics, physiological, phenotypic, behavioral, bioimaging, video, and environmental monitoring telemetry datasets. OSDR includes NASA GeneLab, NASA Ames Life Sciences Data Archive, and the NASA Biological Institutional Scientific Collection. OSDR has >455 studies with datasets from model organisms and non-NASA human astronauts. There are ~12 datasets from the Inspiration 4 (I4) mission, spanning metagenomics, comprehensive metabolic panels, clonal hematopoiesis, spatial transcriptomics, proteomics, and cytokine panels. In the interest of data privacy, two I4 datasets have raw FASTQ and FASTA files relating to the epitranscriptome, and a new request feature is live in OSDR (with a backend review process established) which was developed based on industry norms. OSDR also recently began a collaboration with the European Space Agency (ESA) to scientifically curate and make available >200 terabytes of human and model organism space-relevant data. The OSDR submission portal is designed to ingest and curate ~25 ‘omics assay data types, and ~50 physiological-phenotypic-imaging assay data types, spanning ultrasonography, micro-computed tomography, histology, morphometric photography, rebound tonometry, gait analysis, optical coherence tomography, novel object recognition, flow cytometry, and immunohistochemistry. A suite of analysis tools are available for OSDR users including: 1) an Environmental Data Application to compare radiation, CO2, relative humidity, temperature, and other telemetry across missions and subjects, 2) the RadLab database, a collaboration between NASA, ESA, the German and Italian Space Agencies, and the Bulgarian Academy of Sciences, which compiles radiation measurements relevant to human spaceflight and provides tools for accessing and manipulating the data, and 3) a Multi-study visualization tool which enables users to look across and combine GeneLab’s omics datasets across different experiments and missions. There are ~600 volunteer OSDR Analysis Working Group (AWG) members who: 1) provide feedback on scientific standards for reuse (subject and assay metadata; processing pipelines; dataset formats and uniformed structures for machine-readability), and 2) collaborate to mine-reuse OSDR data conducting scientific analysis. OSDR has enabled 60 publications as of September 2023, many directly from AWG collaborations most notably the Cell Press package in 2020. Lastly, there are at least 15 articles which mine OSDR data part of a package of ~50 articles across Nature Portfolio with research stemming from I4, the Japan Aerospace Exploration Agency, NASA Space Biology, and the NASA Human Research Program.

space biology↗

NASA Open Science Data Repository: Biomedical FAIR Data, Analysis Tools, User Communities, and Discoveries for Deep Space Missions

Increased biomedical risks and challenges associated with deep space missions require new knowledge discovery, new health countermeasures, and development of novel ecosystems, life support, crop production, and biomedical support capabilities. To meet NASA’s Moon to Mars strategic program goals for Human and Biological Sciences, findable, accessible, interoperable, reusable (FAIR), and maximally open-access data is going to be required to enable humanity to thrive in deep space. Indeed, this cornerstone perspective on FAIR and maximally open access data was also recommended in the recent 2023-2032 Decadal Survey from the National Academies of Sciences, Engineering, and Medicine. The NASA Open Science Data Repository (OSDR) is a maximally open access and FAIR database, and meets various scientific, technical, and operational spaceflight needs. It offers public users and submitters the ability to upload, download, search, share, analyze, and visualize data across ‘omics, physiological, phenotypic, behavioral, bioimaging, video, and environmental monitoring telemetry datasets. OSDR includes NASA GeneLab, NASA Ames Life Sciences Data Archive, and the NASA Biological Institutional Scientific Collection. OSDR has >455 studies with datasets from model organisms and non-NASA human astronauts. There are ~12 datasets from the Inspiration 4 (I4) mission, spanning metagenomics, comprehensive metabolic panels, clonal hematopoiesis, spatial transcriptomics, proteomics, and cytokine panels. In the interest of data privacy, two I4 datasets have raw FASTQ and FASTA files relating to the epitranscriptome, and a new request feature is live in OSDR (with a backend review process established) which was developed based on industry norms. OSDR also recently began a collaboration with the European Space Agency (ESA) to scientifically curate and make available >200 terabytes of human and model organism space-relevant data. The OSDR submission portal is designed to ingest and curate ~25 ‘omics assay data types, and ~50 physiological-phenotypic-imaging assay data types, spanning ultrasonography, micro-computed tomography, histology, morphometric photography, rebound tonometry, gait analysis, optical coherence tomography, novel object recognition, flow cytometry, and immunohistochemistry. A suite of analysis tools are available for OSDR users including: 1) an Environmental Data Application to compare radiation, CO2, relative humidity, temperature, and other telemetry across missions and subjects, 2) the RadLab database, a collaboration between NASA, ESA, the German and Italian Space Agencies, and the Bulgarian Academy of Sciences, which compiles radiation measurements relevant to human spaceflight and provides tools for accessing and manipulating the data, and 3) a Multi-study visualization tool which enables users to look across and combine GeneLab’s omics datasets across different experiments and missions. There are ~600 volunteer OSDR Analysis Working Group (AWG) members who: 1) provide feedback on scientific standards for reuse (subject and assay metadata; processing pipelines; dataset formats and uniformed structures for machine-readability), and 2) collaborate to mine-reuse OSDR data conducting scientific analysis. OSDR has enabled 60 publications as of September 2023, many directly from AWG collaborations most notably the Cell Press package in 2020. Lastly, there are at least 15 articles which mine OSDR data part of a package of ~50 articles across Nature Portfolio with research stemming from I4, the Japan Aerospace Exploration Agency, NASA Space Biology, and the NASA Human Research Program.

open access↗

Computer aided photographic engineering

High speed photography is an excellent source of engineering data but only provides a two-dimensional representation of a three-dimensional event. Multiple cameras can be used to provide data for the third dimension but camera locations are not always available. A solution to this problem is to overlay three-dimensional CAD/CAM models of the hardware being tested onto a film or photographic image, allowing the engineer to measure surface distances, relative motions between components, and surface variations.

Hixson, Jeffrey A.↗

Image reproduction with interactive graphics

Software application or development in optical image digital data processing requires a fast, good quality, yet inexpensive hard copy of processed images. To achieve this, a Cambo camera with an f 2.8/150-mm Xenotar lens in a Copal shutter having a Graflok back for 4 x 5 Polaroid type 57 pack-film has been interfaced to an existing Adage, AGT-30/Electro-Mechanical Research, EMR 6050 graphic computer system. Time-lapse photography in conjunction with a log to linear voltage transformation has resulted in an interactive system capable of producing a hard copy in 54 sec. The interactive aspect of the system lies in a Tektronix 4002 graphic computer terminal and its associated hard copy unit.

Buckner, J. D.↗

Multispectral determination of vegetative cover in corn crop canopy

The relationship between different amounts of vegetative ground cover and the energy reflected by corn canopies was investigated. Low altitude photography and an airborne multispectral scanner were used to measure this reflected energy. Field plots were laid out, representing four growth stages of corn. Two plot locations were chosen-on a very dark and a very light surface soil. Color and color infrared photographs were taken from a vertical distance of 10 m. Estimates of ground cover were made from these photographs and were related to field measurements of leaf area index. Ground cover could be predicted from leaf area index measurements by a second order equation. Microdensitometry and digitzation of the three separated dye layers of color infrared film showed that the near infrared dye layer is most valuable in ground cover determinations. Computer analysis of the digitized photography provided an accurate method of determining precent ground cover.

Stoner, E. R.↗

Development and application of operational techniques for the inventory and monitoring of resources and uses for the Texas coastal zone

The author has identified the following significant results. Four LANDSAT scenes were analyzed for the Harbor Island area test sites to produce land cover and land use maps using both image interpretation and computer-assisted techniques. When evaluated against aerial photography, the mean accuracy for three scenes was 84% for the image interpretation product and 62% for the computer-assisted classification maps. Analysis of the fourth scene was not completed using the image interpretation technique, because of poor quality, false color composite, but was available from the computer technique. Preliminary results indicate that these LANDSAT products can be applied to a variety of planning and management activities in the Texas coastal zone.

Harwood, P.↗

Aerial color infrared photography applications to citriculture

Results of a one-year experimental study on the use of aerial color infrared photography in citrus grove management are presented. It is found that the spring season, when trees are in flush (have young leaves), is the best season to photograph visible differences between healthy and diseased trees. It is also shown that the best photography can be obtained with a 12-in. focal length lens. The photographic scale that allowed good photo interpretation with simple inexpensive equipment was 1 in. = 330 ft. The use of a window-overlay transparency method allowed rapid photo interpretation and data recording in computer-compatible forms. Aerial color infrared photography carried out during the spring season revealed a more accurate status of tree condition than visual inspection.

Blazquez, C. H.↗

LANDSAT Remote Sensing: Observations of an Appalachian mountaintop surface coal mining and reclamation operation

The potential benefits of using LANDSAT remote sensing data by state agencies as an aide in monitoring surface coal mining operations are reviewed. A mountaintop surface mine in eastern Kentucky was surveyed over a 5 year period using satellite multispectral scanner data that were classified by computer analyses. The analyses were guided by aerial photography and by ground surveys of the surface mines procured in 1976. The application of the LANDSAT data indicates that: (1) computer classification of the various landcover categories provides information for monitoring the progress of surface mining and reclamation operations; (2) successive yearly changes in barren and revegetated areas can be qualitatively assessed for surface mines of 100 acres or more of disrupted area; (3) barren areas consisting of limestone and shale mixtures may be recognized, and revegetated areas in various stages of growth may be identified against the hilly forest background.

Source record↗

Design and implementation of two two-week Teacher Enhancement Institutes

During this summer, I have been part of a four team effort that planned and executed two two-week Teacher Enhancement Institutes (TEI) for 40 K-8 teachers from this area. The TEI was designed to enhance teachers' background in aeronautics and technology so that they would be better equipped to encourage and to train students in the mathematics, science, and technology fields. The teachers were given a stipend and three graduate credits from Christopher Newport University for their participation in this program. The four ASEE fellows worked together to develop objectives and a schedule of activities for each two-week session based on the program outline given in the grants that were funding this effort. We divided the responsibilities in coordinating and implementing each part of the TEI based on the specific strengths and background of each ASEE fellow. My specific responsibilities were: (1) to develop the course syllabus and generally handle all matters involved with the graduate course; (2) coordinate the follow-up sessions; and (3) design and manage half of the technology sessions that we had scheduled (approximately 30% of the TEI was devoted to technology). Because the first two responsibilities were primarily administrative in nature, I will address only the last. The technology sessions were divided into computer-only and other technologies (e.g., television and digital technology including scanning, digital photography and CD-ROM). I had responsibility for the computer-only technology sessions. The emphasis of these sessions was on use of the Internet specifically to locate and use educational resources. To maximize learning, these sessions were hands-on with two teachers at each computer. Each teacher received instruction in, and actually used, the most popular tools available on the Internet: email (they were given temporary accounts at NASA LaRC), anonymous ftp and archie, gopher and veronica, mosaic, and telnet. Teachers participated in hands-on workshops to learn about these programs, but were also given time during the two-week session to explore on their own and to find resources on the Net that specifically met their needs. In order to ensure that Internet access continues after their return to the classroom, aIl teachers who did not have them also applied for Learning Link accounts (from WHRO, the local public television station) and Virginia Pen accounts (from the Department of Education of Virginia), both of which allow textbased access to Internet. In addition to getting exposure to and practice with Internet tools, teachers were aIso given a hands-on seminar (and also given practice time) on ClarisWorks, an integrated word processing, spreadsheet, database, and paint package. The technology sessions (and TEI as a whole) were enthusiastically received by both new and more experienced teachers as extremely helpful in improving their ability to use technology in developing lesson pIans.

Lambert, Lynn↗

International Symposium on Remote Sensing of Environment, 9th, University of Michigan, Ann Arbor, Mich., April 15-19, 1974, Proceedings. Volumes 1, 2 & 3

The present work gathers together numerous papers describing the use of remote sensing technology for mapping, monitoring, and management of earth resources and man's environment. Studies using various types of sensing equipment are described, including multispectral scanners, radar imagery, spectrometers, lidar, and aerial photography, and both manual and computer-aided data processing techniques are described. Some of the topics covered include: estimation of population density in Tokyo districts from ERTS-1 data, a clustering algorithm for unsupervised crop classification, passive microwave sensing of moist soils, interactive computer processing for land use planning, the use of remote sensing to delineate floodplains, moisture detection from Skylab, scanning thermal plumes, electrically scanning microwave radiometers, oil slick detection by X-band synthetic aperture radar, and the use of space photos for search of oil and gas fields. Individual items are announced in this issue.

Source record↗

Evaluation of satellite remote sensing and automatic data techniques for characterization of wetlands and coastal marshlands

The author has identified the following significant results. ERTS digital data has been used to detect and measure accretion in the large estuarial system of the Atchafalaya River in southern Louisiana. Comparisons of aerial photography taken in October 1970 with a computer printout of ERTS digital data collected on October 1, 1972, show that in a delineated area of 1400 hectares (3460 acres) an accretion of land area in the amount of 112 hectares (277 acres) had occurred. Analysis of band 3 of the ERTS MSS was used to make a land-water map of the area. The accretion test area was marked on this map and the percentage of elements indicated as land was calculated. This percentage was then multiplied by the total test area to obtain the area of land on the date of the ERTS observation for comparison with the aerial photography. Significant improvement in classification accuracy of ERTS MSS data has been achieved by use of a priori probabilities of occurrence in pattern recognition programs. Two classifications were made with accuracies of 76.0% and 81.5%, respectively.

Cartmill, R. H.↗